| Clone Name | rbags4i19 |
|---|---|
| Clone Library Name | barley_pub |
>HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast| precursor Length = 706 Score = 54.7 bits (130), Expect = 5e-08 Identities = 35/77 (45%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -3 Query: 407 KLKXLQDAVAGGSTETIKDALXALNQEVMXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXS 231 KL L++A+ GGST+TIKDAL ALNQEVM S Sbjct: 629 KLGELKEAITGGSTQTIKDALAALNQEVMQLGQSLYNQPGAAGQAGPTPPGSESGPSESS 688 Query: 230 EKTGDGGDVIDADFTDS 180 K G GDVIDADFTDS Sbjct: 689 GKEGPEGDVIDADFTDS 705
>HSP7S_SPIOL (Q08080) Stromal 70 kDa heat shock-related protein, chloroplast| (Fragment) Length = 599 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -3 Query: 407 KLKXLQDAVAGGSTETIKDALXALNQEVM 321 KL L+DA+ GG T+ IKDA+ ALNQEVM Sbjct: 509 KLGELKDAINGGETQAIKDAMAALNQEVM 537
>C3AR_CAVPO (O88680) C3a anaphylatoxin chemotactic receptor (C3a-R) (C3AR)| Length = 475 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = +1 Query: 94 VPIRILGNPVEQNHTHLLHHVLTYSS---IQLLSVKSASITSPPSPVFSD 234 +P + G P+E+N T+ LH+ SS + + K S PP + D Sbjct: 261 LPTNLCGLPMEENRTNTLHNAAFLSSDLDVSNATQKCLSTPEPPQDFWDD 310
>VG18_ICHV1 (Q00120) Hypothetical gene 18 protein| Length = 318 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 97 PIRILGNPVEQNHTHLLHH 153 P+ +L NP+ +HT LLHH Sbjct: 103 PVSVLENPLAVSHTLLLHH 121
>PHLPL_MOUSE (Q8BXA7) PH domain leucine-rich repeat protein phosphatase-like (EC| 3.1.3.16) Length = 1320 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Frame = +1 Query: 91 KVPIRILGN------PVEQNHTHLLHHVLTYSSIQLLSVKSASITSPPSPVFS 231 +VP+RIL + V NH H+L ++ + +++L ++ +++ P +FS Sbjct: 536 EVPMRILSSLSLRKLMVGHNHIHVLPALVEHIPLEVLDIQHNTLSRLPDTLFS 588
>HMDH1_DICDI (P34135) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC| 1.1.1.34) (HMG-CoA reductase 1) Length = 552 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 49 QTSNITNSDTLTGDKVPIRILGN 117 QT +ITN T T K+PI+ L N Sbjct: 122 QTPDITNQPTKTNKKIPIKELSN 144 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,245,810 Number of Sequences: 219361 Number of extensions: 776906 Number of successful extensions: 1921 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1872 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1920 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)