ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4i17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 402 e-109
2dbj|AK072345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 402 e-109
3gb|AY108565.1| Zea mays PCO103773 mRNA sequence 240 5e-60
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 218 2e-53
6emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb... 218 2e-53
7gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
8gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
10gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, c... 44 0.58
11gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, co... 42 2.3
12gb|AC164972.2| Mus musculus BAC clone RP23-143M15 from chromosom... 42 2.3
13emb|CT010330.1| Mus musculus full open reading frame cDNA clone ... 42 2.3
14emb|CR730855.2|CNS0GQVG Tetraodon nigroviridis full-length cDNA 42 2.3
15emb|CR726714.1|CNS0GNOG Tetraodon nigroviridis full-length cDNA 42 2.3
16emb|CR725788.1|CNS0GMYQ Tetraodon nigroviridis full-length cDNA 42 2.3
17emb|CR724559.2|CNS0GM0L Tetraodon nigroviridis full-length cDNA 42 2.3
18gb|BC014291.1| Mus musculus activin A receptor, type II-like 1, ... 42 2.3
19gb|BC015083.1| Mus musculus activin A receptor, type II-like 1, ... 42 2.3
20ref|NM_009612.1| Mus musculus activin A receptor, type II-like 1... 42 2.3
21emb|Z31664.1|MMALK1G M.musculus (NIH Swiss) mRNA for ALK-1 42 2.3
22gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-2... 42 2.3
23dbj|AK134712.1| Mus musculus adult male medulla oblongata cDNA, ... 42 2.3
24dbj|AK160915.1| Mus musculus 18 days pregnant adult female place... 42 2.3
25dbj|AK170870.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 2.3
26dbj|AK018754.1| Mus musculus adult male kidney cDNA, RIKEN full-... 42 2.3
27gb|AC133598.4| Mus musculus BAC clone RP24-374G16 from 13, compl... 42 2.3
28emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chr... 42 2.3
29gb|L48015.1|MUSALK1B Mus musculus activin type IB receptor (ALK-... 42 2.3
30gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 9.0
31gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromoso... 40 9.0
32gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, co... 40 9.0
33emb|AJ720553.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.0
34emb|AL671118.30| Mouse DNA sequence from clone RP23-256J17 on ch... 40 9.0
35emb|AL929014.28| Zebrafish DNA sequence from clone CH211-198B3 i... 40 9.0
36ref|NM_001006200.1| Gallus gallus SH3-domain GRB2-like endophili... 40 9.0
37gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell... 40 9.0
38gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 40 9.0
39gb|AF339080.1|AF339080 Tarsius syrichta growth hormone gene, par... 40 9.0
40gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, co... 40 9.0
41gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10... 40 9.0 
>dbj|AK104059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F12, full
            insert sequence
          Length = 1492

 Score =  402 bits (203), Expect = e-109
 Identities = 449/531 (84%)
 Strand = Plus / Minus

                                                                        
Query: 122  atcaagccggtatgcagtaggaggtgctgagggtgggaggaagcacgcacaccaggtggg 181
            ||||||||||||||||||| |||||||| || || |||||||| |||||||||||||| |
Sbjct: 1197 atcaagccggtatgcagtatgaggtgctcagtgtcggaggaaggacgcacaccaggtgag 1138

                                                                        
Query: 182  gacctgccgggttgcagctgatattcgcatcgcctacgtcgggcaggcctagctgtggcg 241
            | |||||||||||||||||||| || || ||||| ||||  |||||||| ||||| ||||
Sbjct: 1137 ggcctgccgggttgcagctgatgttggcctcgccgacgtgcggcaggcccagctgcggcg 1078

                                                                        
Query: 242  ggtgtacataccccgacaccagcgggacacacgtcacggcgatctcgatccttgatcctt 301
            | || || || || ||||||||||| || |||||||| | |||||| |||||||| ||||
Sbjct: 1077 gatggacgtagccggacaccagcggcacgcacgtcaccgtgatctctatccttgaacctt 1018

                                                                        
Query: 302  gtgtttctgagaatgaaatgtgaccgcttttcctcccagcaaccatccagttctgtggat 361
            || | | ||| |  || | |||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1017 gtttgtttgacagcgatacgtgaccgcatttcctcccagcaaccatccagttctgtgggt 958

                                                                        
Query: 362  tagcgtccacctgataaagtatctcatcatcggacagagatgcctcctccaggtccttga 421
            | ||||| || ||||||||||| || ||  |  ||||||| || |||||| ||| ||| |
Sbjct: 957  tggcgtcgacttgataaagtatttcgtcggctaacagagaggcatcctccgggttcttca 898

                                                                        
Query: 422  gcctttcaacccgccatttcatgttgactaattgaccaaccctcaggcaatcggtagaaa 481
            |||||||||||| |||| |||||||||| |  || |||||||||| ||| || | |||||
Sbjct: 897  gcctttcaaccctccatctcatgttgaccagctggccaaccctcaagcagtccgaagaaa 838

                                                                        
Query: 482  acggaaggaatccaactgccaggcatggatccagaacagggcgcttcagtttgagtgaaa 541
            |||||||||| ||||||||||  ||||| ||||| |||||||||||||  || |  | ||
Sbjct: 837  acggaaggaacccaactgccacacatgggtccaggacagggcgcttcatcttcaccgcaa 778

                                                                        
Query: 542  tcttgaacagaagctcttcagagtcatcaggtttaacaggaactggagagtgtgctccgg 601
            ||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 777  tcttgaatacaagctcctcagaatcatcaggtttaacaggaactggagagtgtgctccag 718

                                                               
Query: 602  ttgctcggtcaccggatatcccgtatttaatattcaacatgctgtctgcct 652
            ||| || |||||||||||| || || ||||||||||||||||| |||||||
Sbjct: 717  ttgttctgtcaccggatattccatacttaatattcaacatgctatctgcct 667
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>dbj|AK072345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049N15, full
            insert sequence
          Length = 4187

 Score =  402 bits (203), Expect = e-109
 Identities = 449/531 (84%)
 Strand = Plus / Minus

                                                                        
Query: 122  atcaagccggtatgcagtaggaggtgctgagggtgggaggaagcacgcacaccaggtggg 181
            ||||||||||||||||||| |||||||| || || |||||||| |||||||||||||| |
Sbjct: 3926 atcaagccggtatgcagtatgaggtgctcagtgtcggaggaaggacgcacaccaggtgag 3867

                                                                        
Query: 182  gacctgccgggttgcagctgatattcgcatcgcctacgtcgggcaggcctagctgtggcg 241
            | |||||||||||||||||||| || || ||||| ||||  |||||||| ||||| ||||
Sbjct: 3866 ggcctgccgggttgcagctgatgttggcctcgccgacgtgcggcaggcccagctgcggcg 3807

                                                                        
Query: 242  ggtgtacataccccgacaccagcgggacacacgtcacggcgatctcgatccttgatcctt 301
            | || || || || ||||||||||| || |||||||| | |||||| |||||||| ||||
Sbjct: 3806 gatggacgtagccggacaccagcggcacgcacgtcaccgtgatctctatccttgaacctt 3747

                                                                        
Query: 302  gtgtttctgagaatgaaatgtgaccgcttttcctcccagcaaccatccagttctgtggat 361
            || | | ||| |  || | |||||||| |||||||||||||||||||||||||||||| |
Sbjct: 3746 gtttgtttgacagcgatacgtgaccgcatttcctcccagcaaccatccagttctgtgggt 3687

                                                                        
Query: 362  tagcgtccacctgataaagtatctcatcatcggacagagatgcctcctccaggtccttga 421
            | ||||| || ||||||||||| || ||  |  ||||||| || |||||| ||| ||| |
Sbjct: 3686 tggcgtcgacttgataaagtatttcgtcggctaacagagaggcatcctccgggttcttca 3627

                                                                        
Query: 422  gcctttcaacccgccatttcatgttgactaattgaccaaccctcaggcaatcggtagaaa 481
            |||||||||||| |||| |||||||||| |  || |||||||||| ||| || | |||||
Sbjct: 3626 gcctttcaaccctccatctcatgttgaccagctggccaaccctcaagcagtccgaagaaa 3567

                                                                        
Query: 482  acggaaggaatccaactgccaggcatggatccagaacagggcgcttcagtttgagtgaaa 541
            |||||||||| ||||||||||  ||||| ||||| |||||||||||||  || |  | ||
Sbjct: 3566 acggaaggaacccaactgccacacatgggtccaggacagggcgcttcatcttcaccgcaa 3507

                                                                        
Query: 542  tcttgaacagaagctcttcagagtcatcaggtttaacaggaactggagagtgtgctccgg 601
            ||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 3506 tcttgaatacaagctcctcagaatcatcaggtttaacaggaactggagagtgtgctccag 3447

                                                               
Query: 602  ttgctcggtcaccggatatcccgtatttaatattcaacatgctgtctgcct 652
            ||| || |||||||||||| || || ||||||||||||||||| |||||||
Sbjct: 3446 ttgttctgtcaccggatattccatacttaatattcaacatgctatctgcct 3396
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>gb|AY108565.1| Zea mays PCO103773 mRNA sequence
          Length = 749

 Score =  240 bits (121), Expect = 5e-60
 Identities = 421/521 (80%)
 Strand = Plus / Minus

                                                                       
Query: 130 ggtatgcagtaggaggtgctgagggtgggaggaagcacgcacaccaggtggggacctgcc 189
           ||||| |||||||| ||||||| ||  |||||||| || ||||||||||| || ||||| 
Sbjct: 544 ggtatacagtaggatgtgctgatggctggaggaaggacacacaccaggtgaggccctgct 485

                                                                       
Query: 190 gggttgcagctgatattcgcatcgcctacgtcgggcaggcctagctgtggcgggtgtaca 249
           ||||||||||| || || || || || || || |||||| | ||||| || ||||| || 
Sbjct: 484 gggttgcagctaatgtttgcctcacccacctccggcaggtccagctgcggtgggtggacg 425

                                                                       
Query: 250 taccccgacaccagcgggacacacgtcacggcgatctcgatccttgatccttgtgtttct 309
           ||||| |||||||| || ||||| ||||| | |||||| |||||||| |||||    | |
Sbjct: 424 tacccagacaccagtggcacacatgtcaccgtgatctccatccttgaaccttgctcattt 365

                                                                       
Query: 310 gagaatgaaatgtgaccgcttttcctcccagcaaccatccagttctgtggattagcgtcc 369
           || || || | |||||| | ||||||||||||||||||||||||||| || || || || 
Sbjct: 364 gacaacgatacgtgaccacatttcctcccagcaaccatccagttctgcgggtttgcctca 305

                                                                       
Query: 370 acctgataaagtatctcatcatcggacagagatgcctcctccaggtccttgagcctttca 429
           |||||||||||||| || |||  ||| |  ||||| |||||| ||   || |||||||| 
Sbjct: 304 acctgataaagtatttcgtcaatggatatggatgcatcctccggggttttcagcctttcg 245

                                                                       
Query: 430 acccgccatttcatgttgactaattgaccaaccctcaggcaatcggtagaaaacggaagg 489
           |||| |||  |||| || ||||| || |||||||||||||| || || ||||| ||||||
Sbjct: 244 accctccacctcatattaactaactgcccaaccctcaggcagtcagttgaaaatggaagg 185

                                                                       
Query: 490 aatccaactgccaggcatggatccagaacagggcgcttcagtttgagtgaaatcttgaac 549
           ||||||||||| |  ||||||||||| ||||| ||||||||| |||||| ||||||||||
Sbjct: 184 aatccaactgctacacatggatccaggacaggtcgcttcagtctgagtgcaatcttgaac 125

                                                                       
Query: 550 agaagctcttcagagtcatcaggtttaacaggaactggagagtgtgctccggttgctcgg 609
           | ||| |||||||| ||| ||| ||| ||||| |  ||||| |||||||| |||  || |
Sbjct: 124 acaagttcttcagaatcaccagatttgacaggtataggagaatgtgctccagtttttctg 65

                                                    
Query: 610 tcaccggatatcccgtatttaatattcaacatgctgtctgc 650
           ||||| |||||||||||  | ||||||| | ||||||||||
Sbjct: 64  tcaccagatatcccgtaggtgatattcagcgtgctgtctgc 24
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  218 bits (110), Expect = 2e-53
 Identities = 221/258 (85%)
 Strand = Plus / Plus

                                                                            
Query: 395      acagagatgcctcctccaggtccttgagcctttcaacccgccatttcatgttgactaatt 454
                ||||||| || |||||| ||| ||| ||||||||||||| |||| |||||||||| |  |
Sbjct: 22553480 acagagaggcatcctccgggttcttcagcctttcaaccctccatctcatgttgaccagct 22553539

                                                                            
Query: 455      gaccaaccctcaggcaatcggtagaaaacggaaggaatccaactgccaggcatggatcca 514
                | |||||||||| ||| || | ||||||||||||||| ||||||||||  ||||| ||||
Sbjct: 22553540 ggccaaccctcaagcagtccgaagaaaacggaaggaacccaactgccacacatgggtcca 22553599

                                                                            
Query: 515      gaacagggcgcttcagtttgagtgaaatcttgaacagaagctcttcagagtcatcaggtt 574
                | |||||||||||||  || |  | ||||||||| | |||||| ||||| ||||||||||
Sbjct: 22553600 ggacagggcgcttcatcttcaccgcaatcttgaatacaagctcctcagaatcatcaggtt 22553659

                                                                            
Query: 575      taacaggaactggagagtgtgctccggttgctcggtcaccggatatcccgtatttaatat 634
                ||||||||||||||||||||||||| |||| || |||||||||||| || || |||||||
Sbjct: 22553660 taacaggaactggagagtgtgctccagttgttctgtcaccggatattccatacttaatat 22553719

                                  
Query: 635      tcaacatgctgtctgcct 652
                |||||||||| |||||||
Sbjct: 22553720 tcaacatgctatctgcct 22553737



 Score =  149 bits (75), Expect = 1e-32
 Identities = 150/175 (85%)
 Strand = Plus / Plus

                                                                            
Query: 122      atcaagccggtatgcagtaggaggtgctgagggtgggaggaagcacgcacaccaggtggg 181
                ||||||||||||||||||| |||||||| || || |||||||| |||||||||||||| |
Sbjct: 22552918 atcaagccggtatgcagtatgaggtgctcagtgtcggaggaaggacgcacaccaggtgag 22552977

                                                                            
Query: 182      gacctgccgggttgcagctgatattcgcatcgcctacgtcgggcaggcctagctgtggcg 241
                | |||||||||||||||||||| || || ||||| ||||  |||||||| ||||| ||||
Sbjct: 22552978 ggcctgccgggttgcagctgatgttggcctcgccgacgtgcggcaggcccagctgcggcg 22553037

                                                                       
Query: 242      ggtgtacataccccgacaccagcgggacacacgtcacggcgatctcgatccttga 296
                | || || || || ||||||||||| || |||||||| | |||||| ||||||||
Sbjct: 22553038 gatggacgtagccggacaccagcggcacgcacgtcaccgtgatctctatccttga 22553092



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 321      gtgaccgcttttcctcccagcaaccatccagttctgtggattagcgtccacctgataaag 380
                |||||||| |||||||||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 22553243 gtgaccgcatttcctcccagcaaccatccagttctgtgggttggcgtcgacttgataaag 22553302

                   
Query: 381      tat 383
                |||
Sbjct: 22553303 tat 22553305
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  218 bits (110), Expect = 2e-53
 Identities = 221/258 (85%)
 Strand = Plus / Plus

                                                                            
Query: 395      acagagatgcctcctccaggtccttgagcctttcaacccgccatttcatgttgactaatt 454
                ||||||| || |||||| ||| ||| ||||||||||||| |||| |||||||||| |  |
Sbjct: 22481825 acagagaggcatcctccgggttcttcagcctttcaaccctccatctcatgttgaccagct 22481884

                                                                            
Query: 455      gaccaaccctcaggcaatcggtagaaaacggaaggaatccaactgccaggcatggatcca 514
                | |||||||||| ||| || | ||||||||||||||| ||||||||||  ||||| ||||
Sbjct: 22481885 ggccaaccctcaagcagtccgaagaaaacggaaggaacccaactgccacacatgggtcca 22481944

                                                                            
Query: 515      gaacagggcgcttcagtttgagtgaaatcttgaacagaagctcttcagagtcatcaggtt 574
                | |||||||||||||  || |  | ||||||||| | |||||| ||||| ||||||||||
Sbjct: 22481945 ggacagggcgcttcatcttcaccgcaatcttgaatacaagctcctcagaatcatcaggtt 22482004

                                                                            
Query: 575      taacaggaactggagagtgtgctccggttgctcggtcaccggatatcccgtatttaatat 634
                ||||||||||||||||||||||||| |||| || |||||||||||| || || |||||||
Sbjct: 22482005 taacaggaactggagagtgtgctccagttgttctgtcaccggatattccatacttaatat 22482064

                                  
Query: 635      tcaacatgctgtctgcct 652
                |||||||||| |||||||
Sbjct: 22482065 tcaacatgctatctgcct 22482082



 Score =  149 bits (75), Expect = 1e-32
 Identities = 150/175 (85%)
 Strand = Plus / Plus

                                                                            
Query: 122      atcaagccggtatgcagtaggaggtgctgagggtgggaggaagcacgcacaccaggtggg 181
                ||||||||||||||||||| |||||||| || || |||||||| |||||||||||||| |
Sbjct: 22481263 atcaagccggtatgcagtatgaggtgctcagtgtcggaggaaggacgcacaccaggtgag 22481322

                                                                            
Query: 182      gacctgccgggttgcagctgatattcgcatcgcctacgtcgggcaggcctagctgtggcg 241
                | |||||||||||||||||||| || || ||||| ||||  |||||||| ||||| ||||
Sbjct: 22481323 ggcctgccgggttgcagctgatgttggcctcgccgacgtgcggcaggcccagctgcggcg 22481382

                                                                       
Query: 242      ggtgtacataccccgacaccagcgggacacacgtcacggcgatctcgatccttga 296
                | || || || || ||||||||||| || |||||||| | |||||| ||||||||
Sbjct: 22481383 gatggacgtagccggacaccagcggcacgcacgtcaccgtgatctctatccttga 22481437



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 321      gtgaccgcttttcctcccagcaaccatccagttctgtggattagcgtccacctgataaag 380
                |||||||| |||||||||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 22481588 gtgaccgcatttcctcccagcaaccatccagttctgtgggttggcgtcgacttgataaag 22481647

                   
Query: 381      tat 383
                |||
Sbjct: 22481648 tat 22481650
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>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131441

 Score =  218 bits (110), Expect = 2e-53
 Identities = 221/258 (85%)
 Strand = Plus / Plus

                                                                         
Query: 395   acagagatgcctcctccaggtccttgagcctttcaacccgccatttcatgttgactaatt 454
             ||||||| || |||||| ||| ||| ||||||||||||| |||| |||||||||| |  |
Sbjct: 56059 acagagaggcatcctccgggttcttcagcctttcaaccctccatctcatgttgaccagct 56118

                                                                         
Query: 455   gaccaaccctcaggcaatcggtagaaaacggaaggaatccaactgccaggcatggatcca 514
             | |||||||||| ||| || | ||||||||||||||| ||||||||||  ||||| ||||
Sbjct: 56119 ggccaaccctcaagcagtccgaagaaaacggaaggaacccaactgccacacatgggtcca 56178

                                                                         
Query: 515   gaacagggcgcttcagtttgagtgaaatcttgaacagaagctcttcagagtcatcaggtt 574
             | |||||||||||||  || |  | ||||||||| | |||||| ||||| ||||||||||
Sbjct: 56179 ggacagggcgcttcatcttcaccgcaatcttgaatacaagctcctcagaatcatcaggtt 56238

                                                                         
Query: 575   taacaggaactggagagtgtgctccggttgctcggtcaccggatatcccgtatttaatat 634
             ||||||||||||||||||||||||| |||| || |||||||||||| || || |||||||
Sbjct: 56239 taacaggaactggagagtgtgctccagttgttctgtcaccggatattccatacttaatat 56298

                               
Query: 635   tcaacatgctgtctgcct 652
             |||||||||| |||||||
Sbjct: 56299 tcaacatgctatctgcct 56316



 Score =  149 bits (75), Expect = 1e-32
 Identities = 150/175 (85%)
 Strand = Plus / Plus

                                                                         
Query: 122   atcaagccggtatgcagtaggaggtgctgagggtgggaggaagcacgcacaccaggtggg 181
             ||||||||||||||||||| |||||||| || || |||||||| |||||||||||||| |
Sbjct: 55497 atcaagccggtatgcagtatgaggtgctcagtgtcggaggaaggacgcacaccaggtgag 55556

                                                                         
Query: 182   gacctgccgggttgcagctgatattcgcatcgcctacgtcgggcaggcctagctgtggcg 241
             | |||||||||||||||||||| || || ||||| ||||  |||||||| ||||| ||||
Sbjct: 55557 ggcctgccgggttgcagctgatgttggcctcgccgacgtgcggcaggcccagctgcggcg 55616

                                                                    
Query: 242   ggtgtacataccccgacaccagcgggacacacgtcacggcgatctcgatccttga 296
             | || || || || ||||||||||| || |||||||| | |||||| ||||||||
Sbjct: 55617 gatggacgtagccggacaccagcggcacgcacgtcaccgtgatctctatccttga 55671



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                         
Query: 321   gtgaccgcttttcctcccagcaaccatccagttctgtggattagcgtccacctgataaag 380
             |||||||| |||||||||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 55822 gtgaccgcatttcctcccagcaaccatccagttctgtgggttggcgtcgacttgataaag 55881

                
Query: 381   tat 383
             |||
Sbjct: 55882 tat 55884
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>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14,
              complete sequence
          Length = 185623

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 286    tcgatccttgatccttgtgtttc 308
              |||||||||||||||||||||||
Sbjct: 111992 tcgatccttgatccttgtgtttc 112014
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>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
              complete sequence
          Length = 160142

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 286    tcgatccttgatccttgtgtttc 308
              |||||||||||||||||||||||
Sbjct: 151219 tcgatccttgatccttgtgtttc 151241
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 286      tcgatccttgatccttgtgtttc 308
                |||||||||||||||||||||||
Sbjct: 21558136 tcgatccttgatccttgtgtttc 21558158
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>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence
          Length = 212273

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 27     aaaaaggaacagtctccaggca 48
              ||||||||||||||||||||||
Sbjct: 149291 aaaaaggaacagtctccaggca 149312
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>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence
          Length = 204464

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 636   caacatgctgtctgcctgttc 656
             |||||||||||||||||||||
Sbjct: 87777 caacatgctgtctgcctgttc 87797
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>gb|AC164972.2| Mus musculus BAC clone RP23-143M15 from chromosome 9, complete sequence
          Length = 237322

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 289   atccttgatccttgtgtttct 309
             |||||||||||||||||||||
Sbjct: 44653 atccttgatccttgtgtttct 44633
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>emb|CT010330.1| Mus musculus full open reading frame cDNA clone RZPDo836E0752D for
           gene Acvrl1, Activin A receptor, type II-like 1;
           complete cds, incl. stopcodon
          Length = 1509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 519 caacatgctgtctgcctgttc 499
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>emb|CR730855.2|CNS0GQVG Tetraodon nigroviridis full-length cDNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 cctcctccaggtccttgagcc 424
           |||||||||||||||||||||
Sbjct: 112 cctcctccaggtccttgagcc 92
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>emb|CR726714.1|CNS0GNOG Tetraodon nigroviridis full-length cDNA
          Length = 1445

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 cctcctccaggtccttgagcc 424
           |||||||||||||||||||||
Sbjct: 110 cctcctccaggtccttgagcc 90
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>emb|CR725788.1|CNS0GMYQ Tetraodon nigroviridis full-length cDNA
          Length = 1453

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 cctcctccaggtccttgagcc 424
           |||||||||||||||||||||
Sbjct: 114 cctcctccaggtccttgagcc 94
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>emb|CR724559.2|CNS0GM0L Tetraodon nigroviridis full-length cDNA
          Length = 1461

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 cctcctccaggtccttgagcc 424
           |||||||||||||||||||||
Sbjct: 117 cctcctccaggtccttgagcc 97
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>gb|BC014291.1| Mus musculus activin A receptor, type II-like 1, mRNA (cDNA clone
           MGC:13970 IMAGE:3982004), complete cds
          Length = 1876

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 710 caacatgctgtctgcctgttc 690
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>gb|BC015083.1| Mus musculus activin A receptor, type II-like 1, mRNA (cDNA clone
           MGC:13969 IMAGE:3980151), complete cds
          Length = 1841

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 672 caacatgctgtctgcctgttc 652
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>ref|NM_009612.1| Mus musculus activin A receptor, type II-like 1 (Acvrl1), mRNA
          Length = 1962

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 793 caacatgctgtctgcctgttc 773
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>emb|Z31664.1|MMALK1G M.musculus (NIH Swiss) mRNA for ALK-1
          Length = 1909

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 759 caacatgctgtctgcctgttc 739
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>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence
          Length = 215113

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 636    caacatgctgtctgcctgttc 656
              |||||||||||||||||||||
Sbjct: 192256 caacatgctgtctgcctgttc 192236
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>dbj|AK134712.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330534I18 product:activin A
           receptor, type II-like 1, full insert sequence
          Length = 3395

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 548 caacatgctgtctgcctgttc 528
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>dbj|AK160915.1| Mus musculus 18 days pregnant adult female placenta and extra
           embryonic tissue cDNA, RIKEN full-length enriched
           library, clone:3830418A02 product:activin A receptor,
           type II-like 1, full insert sequence
          Length = 1934

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 782 caacatgctgtctgcctgttc 762
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>dbj|AK170870.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630206I18
           product:activin A receptor, type II-like 1, full insert
           sequence
          Length = 1698

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 547 caacatgctgtctgcctgttc 527
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>dbj|AK018754.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610042G03 product:activin A receptor,
           type II-like 1, full insert sequence
          Length = 569

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 293 caacatgctgtctgcctgttc 273
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>gb|AC133598.4| Mus musculus BAC clone RP24-374G16 from 13, complete sequence
          Length = 170544

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 556   tcttcagagtcatcaggttta 576
             |||||||||||||||||||||
Sbjct: 28175 tcttcagagtcatcaggttta 28195
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>emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chromosome 9, complete
              sequence
          Length = 238033

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    atccttgatccttgtgtttct 309
              |||||||||||||||||||||
Sbjct: 158110 atccttgatccttgtgtttct 158090
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>gb|L48015.1|MUSALK1B Mus musculus activin type IB receptor (ALK-1) mRNA, complete cds
          Length = 1962

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 636 caacatgctgtctgcctgttc 656
           |||||||||||||||||||||
Sbjct: 793 caacatgctgtctgcctgttc 773
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     cacggcgatctcgatccttg 295
               ||||||||||||||||||||
Sbjct: 1717767 cacggcgatctcgatccttg 1717748
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>gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromosome 17, complete
             sequence
          Length = 181509

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   ctgccaggcatggatccaga 516
             ||||||||||||||||||||
Sbjct: 81576 ctgccaggcatggatccaga 81595
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>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence
          Length = 215147

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 639    catgctgtctgcctgttcca 658
              ||||||||||||||||||||
Sbjct: 177139 catgctgtctgcctgttcca 177158
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>emb|AJ720553.1| Gallus gallus mRNA for hypothetical protein, clone 20c13
          Length = 2619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ctgccaggcatggatccaga 516
            ||||||||||||||||||||
Sbjct: 1184 ctgccaggcatggatccaga 1203
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>emb|AL671118.30| Mouse DNA sequence from clone RP23-256J17 on chromosome X, complete
              sequence
          Length = 234055

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     cagaacaccttgtatctcaaatgg 76
              ||||||||||||||||||| ||||
Sbjct: 139832 cagaacaccttgtatctcagatgg 139855
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>emb|AL929014.28| Zebrafish DNA sequence from clone CH211-198B3 in linkage group 20
             Contains the gene for a novel protein similar to
             vertebrate fibronectin type III domain containing 1
             (FNDC1), the 5' end of the gene for a novel protein
             similar to vertebrate otoferlin (OTOF), a novel gene and
             two CpG islands, complete sequence
          Length = 163523

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   aatgaaatgtgaccgctttt 332
             ||||||||||||||||||||
Sbjct: 58422 aatgaaatgtgaccgctttt 58441
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>ref|NM_001006200.1| Gallus gallus SH3-domain GRB2-like endophilin B2 (SH3GLB2), mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ctgccaggcatggatccaga 516
            ||||||||||||||||||||
Sbjct: 1184 ctgccaggcatggatccaga 1203
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>gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 171451

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 627   tttaatattcaacatgctgt 646
             ||||||||||||||||||||
Sbjct: 91371 tttaatattcaacatgctgt 91352
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>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    gaagcacgcacaccaggtgg 180
              ||||||||||||||||||||
Sbjct: 232205 gaagcacgcacaccaggtgg 232186
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>gb|AF339080.1|AF339080 Tarsius syrichta growth hormone gene, partial cds
          Length = 1072

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 404 cctcctccaggtccttgagc 423
           ||||||||||||||||||||
Sbjct: 650 cctcctccaggtccttgagc 631
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>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence
          Length = 159741

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   gaagcacgcacaccaggtgg 180
             ||||||||||||||||||||
Sbjct: 87238 gaagcacgcacaccaggtgg 87257
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>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
              sequence
          Length = 304419

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 627    tttaatattcaacatgctgt 646
              ||||||||||||||||||||
Sbjct: 235970 tttaatattcaacatgctgt 235951


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,814,835
Number of Sequences: 3902068
Number of extensions: 5814835
Number of successful extensions: 99524
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99374
Number of HSP's gapped (non-prelim): 140
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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