>gb|AC157020.8| Mus musculus 10 BAC RP24-459C13 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 183687

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    aactagagattaaaatccaca 68
             |||||||||||||||||||||
Sbjct: 89555 aactagagattaaaatccaca 89535

>gb|AC091530.4| Papio anubis clone RP41-444A14, complete sequence
          Length = 162413

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     ttaaaatccacactttaagct 77
              |||||||||||||||||||||
Sbjct: 141830 ttaaaatccacactttaagct 141810

>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence
          Length = 173315

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 29    cagaaatacagtttnatagaact 51
             |||||||||||||| ||||||||
Sbjct: 37257 cagaaatacagttttatagaact 37235

>gb|AC004225.1| Homo sapiens chromosome 5, Pac clone 61c2 (LBNL H139), complete
             sequence
          Length = 103916

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tgaacagaatacagaaatac 37
             ||||||||||||||||||||
Sbjct: 59529 tgaacagaatacagaaatac 59548

>gb|AY672645.1| Homo sapiens fibroblast growth factor 13 (FGF13) gene, complete cds
          Length = 83465

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atatgaacagaatacagaaa 34
             ||||||||||||||||||||
Sbjct: 46804 atatgaacagaatacagaaa 46785

>gb|AC133081.4| Mus musculus BAC clone RP24-290O13 from chromosome 3, complete sequence
          Length = 180525

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     tatgaacagaatacagaaat 35
              ||||||||||||||||||||
Sbjct: 154324 tatgaacagaatacagaaat 154343

>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence
          Length = 208096

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    atgaacagaatacagaaatacagt 40
             |||||||||||||| |||||||||
Sbjct: 15510 atgaacagaatacacaaatacagt 15533

>emb|Z82193.1|HS260J9 Human DNA sequence from clone RP1-260J9 on chromosome X Contains part
            of the FGF13 gene for fibroblast growth factor 13, a
            novel gene and a CpG island, complete sequence
          Length = 98209

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   atatgaacagaatacagaaa 34
            ||||||||||||||||||||
Sbjct: 7628 atatgaacagaatacagaaa 7647

>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
              sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    caaaccgattagctcacaga 156
              ||||||||||||||||||||
Sbjct: 491498 caaaccgattagctcacaga 491517

>gb|AC016553.6| Homo sapiens chromosome 5 clone CTC-305H11, complete sequence
          Length = 125837

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tgaacagaatacagaaatac 37
             ||||||||||||||||||||
Sbjct: 59612 tgaacagaatacagaaatac 59593

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 182      acgacgcacaagagatgcacctgagcaa 209
                ||||||||||||||||||| || |||||
Sbjct: 28795974 acgacgcacaagagatgcatctcagcaa 28796001

>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0459B01
          Length = 163087

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 182    acgacgcacaagagatgcacctgagcaa 209
              ||||||||||||||||||| || |||||
Sbjct: 112547 acgacgcacaagagatgcatctcagcaa 112574

>dbj|AK063335.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A06, full
            insert sequence
          Length = 2524

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 182  acgacgcacaagagatgcacctgagcaa 209
            ||||||||||||||||||| || |||||
Sbjct: 2469 acgacgcacaagagatgcatctcagcaa 2442

>emb|AL157912.5|CNS01RGC Human chromosome 14 DNA sequence BAC C-2376I20 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 119906

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 27    tacagaaatacagtttnatagaa 49
             |||||||||||||||| ||||||
Sbjct: 62125 tacagaaatacagtttgatagaa 62103

>gb|AC100406.7| Mus musculus chromosome 9, clone RP23-134M7, complete sequence
          Length = 183837

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 29   cagaaatacagtttnatagaact 51
            |||||||||||||| ||||||||
Sbjct: 4765 cagaaatacagttttatagaact 4787

>gb|AC165412.3| Mus musculus chromosome 3, clone RP24-161M18, complete sequence
          Length = 176496

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tatgaacagaatacagaaat 35
              ||||||||||||||||||||
Sbjct: 136586 tatgaacagaatacagaaat 136567

>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete
             sequence
          Length = 199355

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    atgaacagaatacagaaatacagt 40
             |||||||||||||| |||||||||
Sbjct: 41439 atgaacagaatacacaaatacagt 41416

>emb|AL133368.6|CNS01DUT Human chromosome 14 DNA sequence BAC R-436M15 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163272

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 27   tacagaaatacagtttnatagaa 49
            |||||||||||||||| ||||||
Sbjct: 4317 tacagaaatacagtttgatagaa 4339


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,163,175
Number of Sequences: 3902068
Number of extensions: 2163175
Number of successful extensions: 39472
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39437
Number of HSP's gapped (non-prelim): 35
length of query: 255
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 233
effective length of database: 17,147,199,772
effective search space: 3995297546876
effective search space used: 3995297546876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)