>UVH1_ARATH (Q9LKI5) DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet|
           hypersensitive 1) (AtRAD1) (DNA excision repair protein
           XP-F homolog)
          Length = 956

 Score = 34.3 bits (77), Expect = 0.39
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = -3

Query: 451 FVDDLRLDERFREVKTLAELSIKLVETRKDRVYNIVYRLLRLALILPVGTASDERDLSSV 272
           F+D LR+ E +R V   AE S K+ +  K RVY +V                   D+ S 
Sbjct: 298 FLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLV----------------KASDVKSK 341

Query: 271 NYVNNKAENKLSEQCAND 218
            +V NK+  K + +   D
Sbjct: 342 EHVKNKSGKKRNSKGETD 359

>SYR_PROMP (Q7V396) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 603

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 23/80 (28%), Positives = 38/80 (47%)
 Frame = -3

Query: 601 NTELLICMAAFNPVNSFAAYDEEKLVKLANFYPEDFSQCELLHLPFQLSNFVDDLRLDER 422
           N   +I +      N FA   +  + K AN+ P+D   CE+ H+PF L   +D  +L  R
Sbjct: 352 NAARIIYVTDHGQSNHFAGVFQ--VAKRANWIPKD---CEVNHVPFGLVQGIDGKKLKTR 406

Query: 421 FREVKTLAELSIKLVETRKD 362
             +   L +L  + V+  K+
Sbjct: 407 EGDTIKLKDLLSESVKRAKE 426

>LX12L_MOUSE (P39654) Arachidonate 12-lipoxygenase, leukocyte-type (EC|
           1.13.11.31) (12-LOX)
          Length = 662

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 23/76 (30%), Positives = 31/76 (40%)
 Frame = -3

Query: 448 VDDLRLDERFREVKTLAELSIKLVETRKDRVYNIVYRLLRLALILPVGTASDERDLSSVN 269
           + DL +D+RFRE K L E     V    D V N            P  T +  + L   N
Sbjct: 157 ISDLPVDQRFREDKRL-EFEASQVLGTMDTVIN-----------FPKNTVTCWKSLDDFN 204

Query: 268 YVNNKAENKLSEQCAN 221
           YV      K++E+  N
Sbjct: 205 YVFKSGHTKMAERVRN 220

>TLR4_PIG (Q68Y56) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 841

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
 Frame = -3

Query: 454 NFVDDLRLDERFREVKTLAELSIKLVETRKDRVYNIVYRLLRLALILPVGTASDERDLSS 275
           N +   +L E F  +  L  L +      K+++ NI +  L++   +P+   S +  L+ 
Sbjct: 160 NHIHSFKLPEYFSNLPNLEHLDLS-----KNKIENIYHEHLQVLHQVPLHNLSLDLSLNP 214

Query: 274 VNYVNNKAENKL--------SEQCANDCLVTCLE 197
           +N++   A NK+        S   ++D + TC++
Sbjct: 215 LNFIEPGAFNKIRLNGLTLRSNFNSSDVMKTCIQ 248

>CCA_AZOSE (Q5P3T0) Multifunctional CCA protein [Includes: CCA-adding enzyme|
           (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
           nucleotidyltransferase) (tRNA
           adenylyl-/cytidylyl-transferase) (tRNA
           CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
           3.1.3.-); 2',3'-cycli
          Length = 407

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
 Frame = -3

Query: 571 FNPVNSFAAYDEEKLVKLANFYP--EDFSQC-ELLHLPFQLSNFVDDLRLDERFREVKTL 401
           F  V+   A D  +++++A F    E FS   E L L   +   VDD  +D    E +  
Sbjct: 121 FRHVSEAFAEDPVRVLRVARFAARFEGFSVAGETLAL---MRTMVDDGEVDHLVAE-RVW 176

Query: 400 AELSIKLVETRKDRVYNIVYRLLRLALILP 311
            EL+  L+ETR  R++ ++     LA ILP
Sbjct: 177 QELARGLMETRPSRMFAVLRECCALARILP 206

>BXA2_CLOBO (Q45894) Botulinum neurotoxin type A precursor (EC 3.4.24.69)|
           (BoNT/A) (Bontoxilysin A) (BOTOX) [Contains: Botulinum
           neurotoxin A light-chain; Botulinum neurotoxin A
           heavy-chain]
          Length = 1295

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query: 472 LPFQLSNFVDDLRLDERFRE-VKTLAELSIKLVETRKDRVYNI 347
           +PFQLS +VD+ +L   F E +K +   SI  +  +KD + ++
Sbjct: 848 IPFQLSKYVDNKKLLSTFTEYIKNIVNTSILSIVYKKDDLIDL 890


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,336,442
Number of Sequences: 219361
Number of extensions: 1771704
Number of successful extensions: 4103
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4101
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)