ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
2dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
3emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4,... 56 2e-04
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 7e-04
6gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genom... 54 7e-04
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
10dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 7e-04
12emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb... 54 7e-04
13emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194... 54 7e-04
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
16dbj|AP006449.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
17dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
18dbj|AK100657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
19ref|NM_197827.1| Oryza sativa (japonica cultivar-group) putative... 50 0.010
20emb|AL391099.12| Human DNA sequence from clone RP11-178A10 on ch... 50 0.010
21gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 50 0.010
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
23gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.010
24dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.010
26gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 48 0.040
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
28gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 48 0.040
29dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
30dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic ... 48 0.040
31dbj|AK111274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.040
32gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
33gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
35dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
36dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
37ref|NM_196593.1| Oryza sativa (japonica cultivar-group) putative... 44 0.63
38gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.63
39dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
40ref|XM_471563.1| Oryza sativa (japonica cultivar-group), predic... 42 2.5
41gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
42gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
43gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
44gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
45gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome... 42 2.5
46gb|AC124366.4| Mus musculus BAC clone RP24-541E9 from chromosome... 42 2.5
47emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4,... 42 2.5
48emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,... 42 2.5
49dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
50dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
51gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
52ref|NM_123361.1| Arabidopsis thaliana unknown protein AT5G39980 ... 40 9.8
53ref|NM_103551.1| Arabidopsis thaliana unknown protein AT1G44542 ... 40 9.8
54gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.8
55gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV... 40 9.8
56gb|BT012646.1| Arabidopsis thaliana At1g44542 mRNA, complete cds 40 9.8
57gb|AC166157.5| Mus musculus BAC clone RP24-193D9 from chromosome... 40 9.8
58gb|U97550.2| Caenorhabditis elegans cosmid T20F7, complete sequence 40 9.8
59emb|AL117339.10|HSA508N22 Human DNA sequence from clone RP11-508... 40 9.8
60emb|AL031010.1|HS422F24 Human DNA sequence from clone RP3-422F24... 40 9.8
61emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, c... 40 9.8
62gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, co... 40 9.8
63gb|AC068213.7| Homo sapiens chromosome 15, clone RP11-628M2, com... 40 9.8
64emb|BX511190.8| Zebrafish DNA sequence from clone RP71-80D18 in ... 40 9.8
65gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, co... 40 9.8
66gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, c... 40 9.8
67dbj|AK220578.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 9.8
68gb|AC084807.12|AC084807 Arabidopsis thaliana chromosome 1 BAC T1... 40 9.8
69emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 i... 40 9.8
70gb|AC068787.41| Homo sapiens 12 BAC RP11-483I24 (Roswell Park Ca... 40 9.8
71gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse... 40 9.8
72gb|AF548455.1| Delftia acidovorans phosphodiesterase (pdeA) gene... 40 9.8
73dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.8 
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 18356743 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 18356802

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| | |||||||||||  || ||||  ||||| |||||||||||
Sbjct: 18356803 gaatcaataggattgaaggatgccatgcaaagaagcaactttgtgtttacctcatcaaa 18356861



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 370      ttgtttcaacaagcttgatagaaagctccgcaagagt 406
                ||||||||||||| |||||||| ||||| ||||||||
Sbjct: 14779974 ttgtttcaacaagtttgatagagagctcagcaagagt 14780010



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                           
Query: 542     ataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccgtgtt 601
               ||||||||||||||| | ||  |||||||| | |||||||||||  || |||||||||||
Sbjct: 4237000 ataagcagcaaatgaatcgataggattgaaggatgccatgcaaagaagcaactccgtgtt 4236941



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 365      cttccttgtttcaacaagcttgatagaaagctc 397
                |||| |||||||||||||||| ||||| |||||
Sbjct: 17175483 cttctttgtttcaacaagcttaatagagagctc 17175515
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>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473F05
          Length = 140575

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                         
Query: 495   aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
             |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 42912 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 42971

                                                                        
Query: 555   gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
             || |  |  |||||||| | |||||||||||  || ||||  ||||| |||||||||||
Sbjct: 42972 gaatcaataggattgaaggatgccatgcaaagaagcaactttgtgtttacctcatcaaa 43030
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>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06,
              complete sequence
          Length = 160129

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                          
Query: 570    aatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaagttct 629
              |||| |||||||||  | ||||| |||||||| |||||||||||  ||  ||  || |||
Sbjct: 101511 aatgatgccatgcatctaagtaattccgtgtttacctcatcaaatctgttattgagctct 101452

                                                  
Query: 630    cgaagttgactaccaatgacatccaaaaacatatca 665
               ||||||| ||| |||||||| ||||||||||||||
Sbjct: 101451 tgaagttgcctatcaatgacacccaaaaacatatca 101416



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    atgtaaccaagcaatcattc 224
              ||||||||||||||||||||
Sbjct: 101877 atgtaaccaagcaatcattc 101858
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                           
Query: 570     aatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaagttct 629
               |||| |||||||||  | ||||| |||||||| |||||||||||  ||  ||  || |||
Sbjct: 6680555 aatgatgccatgcatctaagtaattccgtgtttacctcatcaaatctgttattgagctct 6680496

                                                   
Query: 630     cgaagttgactaccaatgacatccaaaaacatatca 665
                ||||||| ||| |||||||| ||||||||||||||
Sbjct: 6680495 tgaagttgcctatcaatgacacccaaaaacatatca 6680460



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 632      aagttgactaccaatgacatccaaaaacatatc 664
                |||||| ||| |||||||| |||||||||||||
Sbjct: 12354565 aagttgcctatcaatgacacccaaaaacatatc 12354533



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 205      atgtaaccaagcaatcattc 224
                ||||||||||||||||||||
Sbjct: 12354947 atgtaaccaagcaatcattc 12354928



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     atgtaaccaagcaatcattc 224
               ||||||||||||||||||||
Sbjct: 6680921 atgtaaccaagcaatcattc 6680902
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 16258466 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 16258525

                                               
Query: 555      gagttgacgggattgaatgctgccatgcaaa 585
                || |  |  |||||||| | |||||||||||
Sbjct: 16258526 gaatcaataggattgaaggatgccatgcaaa 16258556



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                           
Query: 370     ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttcgt 429
               |||||||||||| | | || ||||| || |||||||| ||||||| |||||||||| | |
Sbjct: 9881241 ttgtttcaacaatcataatggaaagatcagcaagagttttcacttttctaaaccttccat 9881182

                        
Query: 430     ctagacgca 438
               ||| |||||
Sbjct: 9881181 ctatacgca 9881173



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 92/112 (82%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                            
Query: 504      ggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaatgagtt-gac 562
                |||||||| |||||||||||||  |  ||||   ||||||||| ||||||||| || || 
Sbjct: 35272125 ggataaaacttggcaagcttaagtactttttgtgcatcataagaagcaaatgaattagaa 35272184

                                                                    
Query: 563      gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaac 614
                ||| || ||||| |||||||||||||  |||||| | || ||||||||||||
Sbjct: 35272185 gggttt-aatgcagccatgcaaatcaacaactccatattaacctcatcaaac 35272235
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>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete
             sequence
          Length = 135585

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                         
Query: 495   aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
             |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 56482 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 56541

                                            
Query: 555   gagttgacgggattgaatgctgccatgcaaa 585
             || |  |  |||||||| | |||||||||||
Sbjct: 56542 gaatcaataggattgaaggatgccatgcaaa 56572
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 10875584 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 10875525

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 10875524 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 10875466



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 10868455 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 10868396

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 10868395 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 10868337



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 10841253 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 10841312

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 10841313 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 10841371
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 16252099 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 16252158

                                               
Query: 555      gagttgacgggattgaatgctgccatgcaaa 585
                || |  |  |||||||| | |||||||||||
Sbjct: 16252159 gaatcaataggattgaaggatgccatgcaaa 16252189



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                           
Query: 370     ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttcgt 429
               |||||||||||| | | || ||||| || |||||||| ||||||| |||||||||| | |
Sbjct: 9879362 ttgtttcaacaatcataatggaaagatcagcaagagttttcacttttctaaaccttccat 9879303

                        
Query: 430     ctagacgca 438
               ||| |||||
Sbjct: 9879302 ctatacgca 9879294



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 92/112 (82%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                            
Query: 504      ggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaatgagtt-gac 562
                |||||||| |||||||||||||  |  ||||   ||||||||| ||||||||| || || 
Sbjct: 35362197 ggataaaacttggcaagcttaagtactttttgtgcatcataagaagcaaatgaattagaa 35362256

                                                                    
Query: 563      gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaac 614
                ||| || ||||| |||||||||||||  |||||| | || ||||||||||||
Sbjct: 35362257 gggttt-aatgcagccatgcaaatcaacaactccatattaacctcatcaaac 35362307
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 40084118 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 40084059

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 40084058 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 40084000
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>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0678F11
          Length = 154292

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                         
Query: 495   aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
             |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 27202 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 27143

                                                                        
Query: 555   gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
             || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 27142 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 27084
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 10875283 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 10875224

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 10875223 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 10875165



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 10868154 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 10868095

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 10868094 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 10868036



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                            
Query: 495      aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
                |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 10840952 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 10841011

                                                                           
Query: 555      gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
                || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 10841012 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 10841070
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>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124204

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                         
Query: 495   aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
             |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 24647 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 24588

                                                                        
Query: 555   gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
             || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 24587 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 24529



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                         
Query: 495   aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
             |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 17518 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 17459

                                                                        
Query: 555   gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
             || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 17458 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 17400
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>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 119388

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                          
Query: 495    aaatcctcgggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaat 554
              |||||||  |||||||| |  |||||||||||||  |||||||  |||||||||||||||
Sbjct: 107602 aaatcctttggataaaattgtgcaagcttaaccaagttttccttgtcataagcagcaaat 107661

                                                                         
Query: 555    gagttgacgggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaa 613
              || |  |  |||||||| |  ||||||||||  || ||||  ||||| |||||||||||
Sbjct: 107662 gaatcaataggattgaaggacgccatgcaaagaagcaactttgtgtttacctcatcaaa 107720
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 370      ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
                |||| |||||||||||||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 27252910 ttgtatcaacaagcttgaccgaaagttcagcaatggtgttcacttctctaaacctttc 27252967



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                            
Query: 563      gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatc 622
                |||||||||||  |||| |||||  ||||| || ||||| |||||||||||  || ||| 
Sbjct: 27253103 gggattgaatgaagccacgcaaacaagtaaatctgtgttcacctcatcaaatctgtcatt 27253162

                                                            
Query: 623      aagttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
                 ||||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 27253163 tagttctctaagttgtctatcaataacactcaaaaacatttcaa 27253206



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 192      tctcgctcaagacatgtaaccaagcaatcattc 224
                ||||| |||||| |||| |||||||||||||||
Sbjct: 25125827 tctcgttcaagaaatgttaccaagcaatcattc 25125859



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 365      cttccttgtttcaacaagcttgatagaaagctc 397
                |||| |||||||||||||||| ||||| |||||
Sbjct: 16052260 cttctttgtttcaacaagcttaatagagagctc 16052228
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                         
Query: 370     ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
               |||| |||||||||||||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 6621957 ttgtatcaacaagcttgaccgaaagttcagcaatggtgttcacttctctaaacctttc 6621900



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                           
Query: 563     gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatc 622
               |||||||||||  |||| |||||  ||||| || ||||| |||||||||||  || ||| 
Sbjct: 6621764 gggattgaatgaagccacgcaaacaagtaaatctgtgttcacctcatcaaatctgtcatt 6621705

                                                           
Query: 623     aagttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
                ||||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 6621704 tagttctctaagttgtctatcaataacactcaaaaacatttcaa 6621661



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                            
Query: 565      gattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaa 624
                |||||||||  ||||||||||  ||||| || ||||  |||||||||||  || |||  |
Sbjct: 11387568 gattgaatgaagccatgcaaacaagtaaatctgtgtctacctcatcaaatctgtcattta 11387627

                                                          
Query: 625      gttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
                |||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 11387628 gttctctaagttgtctatcaataacactcaaaaacatttcaa 11387669



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 370      ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
                |||| |||||||||| ||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 11387373 ttgtatcaacaagctggaccgaaagttcagcaatggtgttcacttctctaaacctttc 11387430
to top
>dbj|AP006449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1106B03
          Length = 155540

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 370   ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
             |||| |||||||||||||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 33065 ttgtatcaacaagcttgaccgaaagttcagcaatggtgttcacttctctaaacctttc 33008



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                         
Query: 563   gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatc 622
             |||||||||||  |||| |||||  ||||| || ||||| |||||||||||  || ||| 
Sbjct: 32872 gggattgaatgaagccacgcaaacaagtaaatctgtgttcacctcatcaaatctgtcatt 32813

                                                         
Query: 623   aagttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
              ||||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 32812 tagttctctaagttgtctatcaataacactcaaaaacatttcaa 32769
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>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1151D08
          Length = 152824

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                        
Query: 370    ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
              |||| |||||||||||||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 120627 ttgtatcaacaagcttgaccgaaagttcagcaatggtgttcacttctctaaacctttc 120570



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                          
Query: 563    gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatc 622
              |||||||||||  |||| |||||  ||||| || ||||| |||||||||||  || ||| 
Sbjct: 120434 gggattgaatgaagccacgcaaacaagtaaatctgtgttcacctcatcaaatctgtcatt 120375

                                                          
Query: 623    aagttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
               ||||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 120374 tagttctctaagttgtctatcaataacactcaaaaacatttcaa 120331
to top
>dbj|AK100657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H13, full
            insert sequence
          Length = 2861

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 370  ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
            |||| |||||||||||||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 2028 ttgtatcaacaagcttgaccgaaagttcagcaatggtgttcacttctctaaacctttc 1971



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                        
Query: 563  gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatc 622
            |||||||||||  |||| |||||  ||||| || ||||| |||||||||||  || ||| 
Sbjct: 1835 gggattgaatgaagccacgcaaacaagtaaatctgtgttcacctcatcaaatctgtcatt 1776

                                                        
Query: 623  aagttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
             ||||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 1775 tagttctctaagttgtctatcaataacactcaaaaacatttcaa 1732
to top
>ref|NM_197827.1| Oryza sativa (japonica cultivar-group) putative transposase
            (OSJNBa0095C07.21), mRNA
          Length = 2436

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 538  catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
            |||||||||  |||||||| ||||  ||||| ||||||| ||||||||| || || ||| 
Sbjct: 2011 catcataagaggcaaatgaattgaatggattcaatgctgacatgcaaatgagcaattcca 1952

                             
Query: 598  tgttgacctcatcaaac 614
            | || ||||||||||||
Sbjct: 1951 tattaacctcatcaaac 1935



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 370  ttgtttcaacaagcttgatagaaagctccgcaagagt 406
            ||||||||||||| || ||||| ||||| ||||||||
Sbjct: 2179 ttgtttcaacaagtttaatagagagctcagcaagagt 2143
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>emb|AL391099.12| Human DNA sequence from clone RP11-178A10 on chromosome 10 Contains a
             novel gene (FLJ34785 FLJ33470), a novel gene and a CpG
             island, complete sequence
          Length = 123083

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 363   tccttccttgtttcaacaagcttga 387
             |||||||||||||||||||||||||
Sbjct: 51927 tccttccttgtttcaacaagcttga 51951
to top
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
             sequence
          Length = 187707

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                         
Query: 538   catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
             |||||||||  |||||||| ||||  ||||| ||||||| ||||||||| || || ||| 
Sbjct: 75798 catcataagaggcaaatgaattgaatggattcaatgctgacatgcaaatgagcaattcca 75739

                              
Query: 598   tgttgacctcatcaaac 614
             | || ||||||||||||
Sbjct: 75738 tattaacctcatcaaac 75722



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 370   ttgtttcaacaagcttgatagaaagctccgcaagagt 406
             ||||||||||||| || ||||| ||||| ||||||||
Sbjct: 75966 ttgtttcaacaagtttaatagagagctcagcaagagt 75930
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                            
Query: 538      catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
                |||||||||  |||||||| ||||  ||||| ||||||| ||||||||| || || ||| 
Sbjct: 22071254 catcataagaggcaaatgaattgaatggattcaatgctgacatgcaaatgagcaattcca 22071195

                                 
Query: 598      tgttgacctcatcaaac 614
                | || ||||||||||||
Sbjct: 22071194 tattaacctcatcaaac 22071178



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 631      gaagttgactaccaatgacatccaaaaacatatc 664
                ||||||| ||| |||||||| |||||||||||||
Sbjct: 14678294 gaagttgcctatcaatgacacccaaaaacatatc 14678327



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 370      ttgtttcaacaagcttgatagaaagctccgcaagagt 406
                ||||||||||||| || ||||| ||||| ||||||||
Sbjct: 22071422 ttgtttcaacaagtttaatagagagctcagcaagagt 22071386



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     atgtaaccaagcaatcattc 224
               ||||||||||||||||||||
Sbjct: 3012773 atgtaaccaagcaatcattc 3012792
to top
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 370   ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttcgt 429
             |||||||||||| | | || ||||| || |||||||| ||||||| |||||||||| | |
Sbjct: 43630 ttgtttcaacaatcataatggaaagatcagcaagagttttcacttttctaaaccttccat 43571

                      
Query: 430   ctagacgca 438
             ||| |||||
Sbjct: 43570 ctatacgca 43562
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>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0030G18
          Length = 167557

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 370   ttgtttcaacaagcttgatagaaagctccgcaagagt 406
             ||||||||||||| |||||||| ||||| ||||||||
Sbjct: 72061 ttgtttcaacaagtttgatagagagctcagcaagagt 72097
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                            
Query: 538      catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
                |||||||||  |||||||| ||||  ||||| ||||||| ||||||||| || || ||| 
Sbjct: 22082917 catcataagaggcaaatgaattgaatggattcaatgctgacatgcaaatgagcaattcca 22082858

                                 
Query: 598      tgttgacctcatcaaac 614
                | || ||||||||||||
Sbjct: 22082857 tattaacctcatcaaac 22082841



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 631      gaagttgactaccaatgacatccaaaaacatatc 664
                ||||||| ||| |||||||| |||||||||||||
Sbjct: 14686535 gaagttgcctatcaatgacacccaaaaacatatc 14686568



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 370      ttgtttcaacaagcttgatagaaagctccgcaagagt 406
                ||||||||||||| || ||||| ||||| ||||||||
Sbjct: 22083085 ttgtttcaacaagtttaatagagagctcagcaagagt 22083049



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     atgtaaccaagcaatcattc 224
               ||||||||||||||||||||
Sbjct: 3012694 atgtaaccaagcaatcattc 3012713
to top
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 92/112 (82%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                          
Query: 504    ggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaatgagtt-gac 562
              |||||||| |||||||||||||  |  ||||   ||||||||| ||||||||| || || 
Sbjct: 150886 ggataaaacttggcaagcttaagtactttttgtgcatcataagaagcaaatgaattagaa 150945

                                                                  
Query: 563    gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaac 614
              ||| || ||||| |||||||||||||  |||||| | || ||||||||||||
Sbjct: 150946 gggttt-aatgcagccatgcaaatcaacaactccatattaacctcatcaaac 150996
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 365    cttccttgtttcaacaagcttgatagaaagct 396
              |||| |||||||||||||||| ||||||||||
Sbjct: 617670 cttctttgtttcaacaagcttaatagaaagct 617639



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 631      gaagttgactaccaatgacatccaaaaacatatca 665
                ||||||| ||| |||||||| ||||||||||||||
Sbjct: 21113701 gaagttgtctatcaatgacacccaaaaacatatca 21113735
to top
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
             sequence
          Length = 116443

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 92/112 (82%), Gaps = 2/112 (1%)
 Strand = Plus / Minus

                                                                         
Query: 504   ggataaaagttggcaagcttaaccagcttttcctcatcataagcagcaaatgagtt-gac 562
             |||||||| |||||||||||||  |  ||||   ||||||||| ||||||||| || || 
Sbjct: 96329 ggataaaacttggcaagcttaagtactttttgtgcatcataagaagcaaatgaattagaa 96270

                                                                 
Query: 563   gggattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaac 614
             ||| || ||||| |||||||||||||  |||||| | || ||||||||||||
Sbjct: 96269 gggttt-aatgcagccatgcaaatcaacaactccatattaacctcatcaaac 96219
to top
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1590_E05
          Length = 148205

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 542    ataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccgtgtt 601
              ||||||||||||||| | ||  |||||||| | |||||||||||  || |||||||||||
Sbjct: 136623 ataagcagcaaatgaatcgataggattgaaggatgccatgcaaagaagcaactccgtgtt 136564
to top
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC
             clone:P0029D06
          Length = 150120

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 365   cttccttgtttcaacaagcttgatagaaagct 396
             |||| |||||||||||||||| ||||||||||
Sbjct: 24098 cttctttgtttcaacaagcttaatagaaagct 24067
to top
>dbj|AK111274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-G06, full
           insert sequence
          Length = 884

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 542 ataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccgtgtt 601
           ||||||||||||||| | ||  |||||||| | |||||||||||  || |||||||||||
Sbjct: 394 ataagcagcaaatgaatcgataggattgaaggatgccatgcaaagaagcaactccgtgtt 335
to top
>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                         
Query: 570   aatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaagttct 629
             |||| |||||||||  | ||||| || ||||| |||||||||||  ||  ||  || |||
Sbjct: 19766 aatgatgccatgcatctaagtaattctgtgtttacctcatcaaatctgttattgagctct 19707

                                                
Query: 630   cgaagttgactaccaatgacatccaaaaacatatc 664
              ||||||| ||| |||||||| |||||||||||||
Sbjct: 19706 tgaagttgcctatcaatgacacccaaaaacatatc 19672



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   atgtaaccaagcaatcattc 224
             ||||||||||||||||||||
Sbjct: 20133 atgtaaccaagcaatcattc 20114
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>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17,
              complete sequence
          Length = 174949

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                          
Query: 570    aatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaagttct 629
              |||| |||||||||  | ||||| || ||||| |||||||||||  ||  ||  || |||
Sbjct: 134262 aatgatgccatgcatctaagtaattctgtgtttacctcatcaaatctgttattgagctct 134321

                                                 
Query: 630    cgaagttgactaccaatgacatccaaaaacatatc 664
               ||||||| ||| |||||||| |||||||||||||
Sbjct: 134322 tgaagttgcctatcaatgacacccaaaaacatatc 134356



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    atgtaaccaagcaatcattc 224
              ||||||||||||||||||||
Sbjct: 133897 atgtaaccaagcaatcattc 133916
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                           
Query: 570     aatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaagttct 629
               |||| |||||||||  | ||||| || ||||| |||||||||||  ||  ||  || |||
Sbjct: 8097533 aatgatgccatgcatctaagtaattctgtgtttacctcatcaaatctgttattgagctct 8097474

                                                  
Query: 630     cgaagttgactaccaatgacatccaaaaacatatc 664
                ||||||| ||| |||||||| |||||||||||||
Sbjct: 8097473 tgaagttgcctatcaatgacacccaaaaacatatc 8097439



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                           
Query: 570     aatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaagttct 629
               |||| |||||||||  | ||||| || ||||| |||||||||||  ||  ||  || |||
Sbjct: 8044671 aatgatgccatgcatctaagtaattctgtgtttacctcatcaaatctgttattgagctct 8044730

                                                  
Query: 630     cgaagttgactaccaatgacatccaaaaacatatc 664
                ||||||| ||| |||||||| |||||||||||||
Sbjct: 8044731 tgaagttgcctatcaatgacacccaaaaacatatc 8044765



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 538      catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
                |||||||||  |||||||| ||||  ||||| ||||||| ||| ||||| || || ||| 
Sbjct: 12731170 catcataagaggcaaatgaattgaatggattcaatgctgacatacaaatgagcaattcca 12731111

                                 
Query: 598      tgttgacctcatcaaac 614
                | || ||||||||||||
Sbjct: 12731110 tattaacctcatcaaac 12731094



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     atgtaaccaagcaatcattc 224
               ||||||||||||||||||||
Sbjct: 8097900 atgtaaccaagcaatcattc 8097881



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     atgtaaccaagcaatcattc 224
               ||||||||||||||||||||
Sbjct: 8044306 atgtaaccaagcaatcattc 8044325
to top
>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0456F09
          Length = 141336

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 631   gaagttgactaccaatgacatccaaaaacatatca 665
             ||||||| ||| |||||||| ||||||||||||||
Sbjct: 12362 gaagttgtctatcaatgacacccaaaaacatatca 12396
to top
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0528E12
          Length = 139750

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 631    gaagttgactaccaatgacatccaaaaacatatca 665
              ||||||| ||| |||||||| ||||||||||||||
Sbjct: 110702 gaagttgtctatcaatgacacccaaaaacatatca 110736
to top
>ref|NM_196593.1| Oryza sativa (japonica cultivar-group) putative transposase
           (OSJNBa0073D04.3), mRNA
          Length = 1242

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 631 gaagttgactaccaatgacatccaaaaacatatc 664
           ||||||| ||| |||||||| |||||||||||||
Sbjct: 385 gaagttgcctatcaatgacacccaaaaacatatc 352
to top
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            nbxb0073D04, complete sequence
          Length = 155372

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 631  gaagttgactaccaatgacatccaaaaacatatc 664
            ||||||| ||| |||||||| |||||||||||||
Sbjct: 3443 gaagttgcctatcaatgacacccaaaaacatatc 3476
to top
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0591A03
          Length = 147043

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                         
Query: 565   gattgaatgctgccatgcaaatcagtaactccgtgttgacctcatcaaacatgccatcaa 624
             |||||||||  ||||||||||  ||||| || ||||  |||||||||||  || |||  |
Sbjct: 21256 gattgaatgaagccatgcaaacaagtaaatctgtgtctacctcatcaaatctgtcattta 21315

                                                       
Query: 625   gttctcgaagttgactaccaatgacatccaaaaacatatcaa 666
             |||||| |||||| ||| |||| |||  ||||||||| ||||
Sbjct: 21316 gttctctaagttgtctatcaataacactcaaaaacatttcaa 21357



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 370   ttgtttcaacaagcttgatagaaagctccgcaagagtcttcacttctctaaacctttc 427
             |||| |||||||||| ||  ||||| || ||||  || ||||||||||||||||||||
Sbjct: 21061 ttgtatcaacaagctggaccgaaagttcagcaatggtgttcacttctctaaacctttc 21118
to top
>ref|XM_471563.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1890

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 632  aagttgactaccaatgacatccaaaaacatatc 664
            |||||| ||| |||||||| |||||||||||||
Sbjct: 1656 aagttgcctatcaatgacacccaaaaacatatc 1624
to top
>gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0094L06, complete sequence
          Length = 189328

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 365   cttccttgtttcaacaagcttgatagaaagctc 397
             |||| |||||||||||||||| ||||| |||||
Sbjct: 38054 cttctttgtttcaacaagcttaatagagagctc 38022
to top
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0079P23, complete sequence
          Length = 125090

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 192   tctcgctcaagacatgtaaccaagcaatcattc 224
             ||||| |||||| |||| |||||||||||||||
Sbjct: 64118 tctcgttcaagaaatgttaccaagcaatcattc 64150
to top
>gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017K22,
              complete sequence
          Length = 176399

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 365    cttccttgtttcaacaagcttgatagaaagctc 397
              |||| |||||||||||||||| ||||| |||||
Sbjct: 106950 cttctttgtttcaacaagcttaatagagagctc 106918
to top
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 538   catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
             |||||||||  |||||||| ||||  ||||| ||||||| ||| ||||| || || ||| 
Sbjct: 28629 catcataagaggcaaatgaattgaatggattcaatgctgacatacaaatgagcaattcca 28570

                              
Query: 598   tgttgacctcatcaaac 614
             | || ||||||||||||
Sbjct: 28569 tattaacctcatcaaac 28553
to top
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                          
Query: 538    catcataagcagcaaatgagttgacgggattgaatgctgccatgcaaatcagtaactccg 597
              |||||||||  |||||||| ||||  ||||| ||||||| ||| ||||| || || ||| 
Sbjct: 101457 catcataagaggcaaatgaattgaatggattcaatgctgacatacaaatgagcaattcca 101398

                               
Query: 598    tgttgacctcatcaaac 614
              | || ||||||||||||
Sbjct: 101397 tattaacctcatcaaac 101381
to top
>gb|AC124366.4| Mus musculus BAC clone RP24-541E9 from chromosome 1, complete sequence
          Length = 166555

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    ctactcaacagcaaagaaaat 51
             |||||||||||||||||||||
Sbjct: 34880 ctactcaacagcaaagaaaat 34900
to top
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24,
             complete sequence
          Length = 132465

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 632   aagttgactaccaatgacatccaaaaacatatc 664
             |||||| ||| |||||||| |||||||||||||
Sbjct: 28591 aagttgcctatcaatgacacccaaaaacatatc 28559



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   atgtaaccaagcaatcattc 224
             ||||||||||||||||||||
Sbjct: 28973 atgtaaccaagcaatcattc 28954
to top
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05,
              complete sequence
          Length = 185211

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 632    aagttgactaccaatgacatccaaaaacatatc 664
              |||||| ||| |||||||| |||||||||||||
Sbjct: 179449 aagttgcctatcaatgacacccaaaaacatatc 179417



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    atgtaaccaagcaatcattc 224
              ||||||||||||||||||||
Sbjct: 179831 atgtaaccaagcaatcattc 179812
to top
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091C18
          Length = 154416

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 365   cttccttgtttcaacaagcttgatagaaagctc 397
             |||| |||||||||||||||| ||||| |||||
Sbjct: 99338 cttctttgtttcaacaagcttaatagagagctc 99370
to top
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 365   cttccttgtttcaacaagcttgatagaaagctc 397
             |||| |||||||||||||||| ||||| |||||
Sbjct: 36108 cttctttgtttcaacaagcttaatagagagctc 36140
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 192      tctcgctcaagacatgtaaccaagcaatcattc 224
                ||||| |||||| |||| |||||||||||||||
Sbjct: 25436673 tctcgttcaagaaatgttaccaagcaatcattc 25436705



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 365      cttccttgtttcaacaagcttgatagaaagctc 397
                |||| |||||||||||||||| ||||| |||||
Sbjct: 16145442 cttctttgtttcaacaagcttaatagagagctc 16145410
to top
>ref|NM_123361.1| Arabidopsis thaliana unknown protein AT5G39980 mRNA, complete cds
          Length = 2037

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 680  aagattcgtggccttttcgt 699
            ||||||||||||||||||||
Sbjct: 1266 aagattcgtggccttttcgt 1247
to top
>ref|NM_103551.1| Arabidopsis thaliana unknown protein AT1G44542 mRNA, complete cds
          Length = 816

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 537 tcatcataagcagcaaatga 556
           ||||||||||||||||||||
Sbjct: 653 tcatcataagcagcaaatga 634
to top
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     acagcaaagaaaatatgaag 57
              ||||||||||||||||||||
Sbjct: 302836 acagcaaagaaaatatgaag 302855
to top
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
             sequence
          Length = 116448

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   cttcacttctctaaaccttt 426
             ||||||||||||||||||||
Sbjct: 46059 cttcacttctctaaaccttt 46078
to top
>gb|BT012646.1| Arabidopsis thaliana At1g44542 mRNA, complete cds
          Length = 816

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 537 tcatcataagcagcaaatga 556
           ||||||||||||||||||||
Sbjct: 653 tcatcataagcagcaaatga 634
to top
>gb|AC166157.5| Mus musculus BAC clone RP24-193D9 from chromosome 1, complete sequence
          Length = 160305

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   cagcttttcctcatcataag 546
             ||||||||||||||||||||
Sbjct: 43960 cagcttttcctcatcataag 43941
to top
>gb|U97550.2| Caenorhabditis elegans cosmid T20F7, complete sequence
          Length = 37779

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aggttcacagactactcaac 39
             ||||||||||||||||||||
Sbjct: 21819 aggttcacagactactcaac 21838
to top
>emb|AL117339.10|HSA508N22 Human DNA sequence from clone RP11-508N22 on chromosome 10 Contains the
              ZNF37A gene for zinc finger protein 37a (KOX 21), a
              eukaryotic translation initiation factor 3 subunit 6
              interacting protein (EIF3S6IP) pseudogene, a FXYD domain
              containing ion transport regulator 6 (FXYD6) pseudogene,  a
              par-3 partitioning defective 3 homolog (C.elegans) (PARD3)
              pseudogene, two novel genes, the 5' end of a novel gene for
              a protein similar to hypthetical protein FLJ40773
              (containing FLJ3472), a pseudogene similar to part of
              excision repair cross-complementing rodent repair
              deficiency, complementation group 3 (xeroderma pigmentosum
              group B complementing) (ERCC3) and a CpG island, complete
              sequence
          Length = 208642

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 364    ccttccttgtttcaacaagcttga 387
              |||||||||||||| |||||||||
Sbjct: 115298 ccttccttgtttcagcaagcttga 115275
to top
>emb|AL031010.1|HS422F24 Human DNA sequence from clone RP3-422F24 on chromosome 6q24.1-25.2
              Contains the C6orf71 gene and a signal sequence receptor,
              alpha (translocon-associated protein alpha) (SSR1) (TRAPA)
              pseudogene, complete sequence
          Length = 107159

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tttcaacaagcttgatagaa 392
              ||||||||||||||||||||
Sbjct: 106863 tttcaacaagcttgatagaa 106882
to top
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
          Length = 159629

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   cttcacttctctaaaccttt 426
             ||||||||||||||||||||
Sbjct: 67337 cttcacttctctaaaccttt 67356
to top
>gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, complete sequence
          Length = 190809

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 26     acagactactcaacagcaaagaaaatat 53
              |||| ||||||||||| |||||||||||
Sbjct: 163730 acagcctactcaacagaaaagaaaatat 163703
to top
>gb|AC068213.7| Homo sapiens chromosome 15, clone RP11-628M2, complete sequence
          Length = 146606

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 399  gcaagagtcttcacttctctaaac 422
            |||||||| |||||||||||||||
Sbjct: 3516 gcaagagttttcacttctctaaac 3539
to top
>emb|BX511190.8| Zebrafish DNA sequence from clone RP71-80D18 in linkage group 5,
             complete sequence
          Length = 156408

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   tttctcgctcaagacatgta 209
             ||||||||||||||||||||
Sbjct: 44000 tttctcgctcaagacatgta 43981
to top
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence
          Length = 198295

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 399    gcaagagtcttcacttctctaaac 422
              |||||||| |||||||||||||||
Sbjct: 192670 gcaagagttttcacttctctaaac 192693
to top
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence
          Length = 134553

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    atgtaaccaagcaatcattc 224
              ||||||||||||||||||||
Sbjct: 101195 atgtaaccaagcaatcattc 101214
to top
>dbj|AK220578.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL15-44-L02
          Length = 1028

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 537 tcatcataagcagcaaatga 556
           ||||||||||||||||||||
Sbjct: 685 tcatcataagcagcaaatga 666
to top
>gb|AC084807.12|AC084807 Arabidopsis thaliana chromosome 1 BAC T18F15 genomic sequence, complete
             sequence
          Length = 81704

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   tcatcataagcagcaaatga 556
             ||||||||||||||||||||
Sbjct: 22039 tcatcataagcagcaaatga 22020
to top
>emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 in linkage group 3,
              complete sequence
          Length = 218404

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    atgatggcatcgtccttcac 178
              ||||||||||||||||||||
Sbjct: 169350 atgatggcatcgtccttcac 169331
to top
>gb|AC068787.41| Homo sapiens 12 BAC RP11-483I24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173320

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    taaaaggttcacagactact 35
             ||||||||||||||||||||
Sbjct: 23585 taaaaggttcacagactact 23566
to top
>gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse BAC) complete sequence
          Length = 142488

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    cagcttttcctcatcataag 546
              ||||||||||||||||||||
Sbjct: 117512 cagcttttcctcatcataag 117493
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>gb|AF548455.1| Delftia acidovorans phosphodiesterase (pdeA) gene, complete cds; and
            insertion sequence IS1071, partial sequence
          Length = 7282

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  cgcgcattgctccgacagct 243
            ||||||||||||||||||||
Sbjct: 1345 cgcgcattgctccgacagct 1326
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>dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH19
          Length = 77380

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 680   aagattcgtggccttttcgt 699
             ||||||||||||||||||||
Sbjct: 54391 aagattcgtggccttttcgt 54410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,571,478
Number of Sequences: 3902068
Number of extensions: 5571478
Number of successful extensions: 100077
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99094
Number of HSP's gapped (non-prelim): 961
length of query: 714
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 691
effective length of database: 17,143,297,704
effective search space: 11846018713464
effective search space used: 11846018713464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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