ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483424.1| Oryza sativa (japonica cultivar-group), mRNA 96 2e-16
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
3dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
4dbj|AK069638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
5dbj|AK058552.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
6gb|AY111604.1| Zea mays CL11280_1 mRNA sequence 54 6e-04
7gb|AC090363.16| Homo sapiens chromosome 18, clone RP11-885J19, c... 46 0.14
8gb|AC103814.2| Homo sapiens chromosome 18, clone CTD-3111I19, co... 46 0.14
9gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 42 2.1
10gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 42 2.1
11gb|AC134582.5| Mus musculus BAC clone RP24-90M17 from chromosome... 42 2.1
12ref|XM_755932.1| Ustilago maydis 521 hypothetical protein (UM048... 42 2.1
13gb|AC007321.2| Homo sapiens BAC clone RP11-507C1 from 7, complet... 42 2.1
14gb|AC146192.2| Pan troglodytes BAC clone RP43-35D13 from 7, comp... 42 2.1
15emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chrom... 42 2.1
16emb|AL359712.12| Human DNA sequence from clone RP11-352J4 on chr... 42 2.1
17gb|AC067796.11| Homo sapiens chromosome 18, clone RP11-609K12, c... 42 2.1
18gb|AC090366.8| Homo sapiens chromosome 18, clone RP11-666O22, co... 42 2.1
19gb|AY623664.1| Mycobacterium marinum mycobacterial enhanced infe... 42 2.1
20gb|AC121355.9| Mus musculus chromosome 15, clone RP24-434C10, co... 42 2.1
21dbj|AP002498.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.1
22ref|NM_017192.1| Rattus norvegicus endothelial differentiation, ... 40 8.3
23gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.3
25gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete... 40 8.3
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.3
27gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
28gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 8.3
29ref|NM_001032714.1| Takifugu rubripes XK-related protein 4 (XRG4... 40 8.3
30gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, c... 40 8.3
31gb|BT011392.1| Drosophila melanogaster AT28457 full insert cDNA 40 8.3
32gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome... 40 8.3
33gb|AC144509.3| Mus musculus BAC clone RP23-394G5 from chromosome... 40 8.3
34gb|AC091092.3| Papio anubis clone RP41-191D8, complete sequence 40 8.3
35gb|AC116142.8| Mus musculus chromosome 5, clone RP23-140B23, com... 40 8.3
36emb|AL451082.6| Human DNA sequence from clone RP11-307B16 on chr... 40 8.3
37emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.3
38emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ... 40 8.3
39emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, B... 40 8.3
40emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BA... 40 8.3
41emb|AJ441131.1|AGA441131 Anopheles gambiae BAC clone 8N20 40 8.3
42emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 40 8.3
43ref|NM_169452.1| Drosophila melanogaster dpr17 CG31361-RB, trans... 40 8.3
44gb|AC105940.2| Homo sapiens chromosome 1 clone RP11-335O13, comp... 40 8.3
45gb|AC084114.8| Homo sapiens chromosome 8, clone RP11-1059L18, co... 40 8.3
46gb|AC007636.19| Mus musculus strain RIII Fibroblast cell line C1... 40 8.3
47gb|AC010261.5| Homo sapiens chromosome 5 clone CTC-459M5, comple... 40 8.3
48dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
50gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, comple... 40 8.3
51gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown,... 40 8.3
52gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G... 40 8.3
53dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.3
54gb|AC139426.2| Homo sapiens chromosome 15, clone RP13-395E19, co... 40 8.3
55gb|AC021413.16| Homo sapiens chromosome 15, clone RP11-30N16, co... 40 8.3
56gb|AC022816.15|AC022816 Homo sapiens chromosome 17, clone RP11-6... 40 8.3
57dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22,... 40 8.3
58dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13,... 40 8.3
59dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for pho... 40 8.3
60dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.3
61emb|Z82084.1|CEZK1053 Caenorhabditis elegans Cosmid ZK1053, comp... 40 8.3
62gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32... 40 8.3
63dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.3
64gb|AY534266.1| Takifugu rubripes XK-related protein 4 mRNA, comp... 40 8.3
65gb|AC154677.2| Mus musculus BAC clone RP24-299I4 from chromosome... 40 8.3
66emb|AL954131.8| Mouse DNA sequence from clone RP23-32H12 on chro... 40 8.3
67gb|AY210783.2| Nodularia spumigena strain NSOR10 putative heat t... 40 8.3
68emb|AL672019.7| Mouse DNA sequence from clone RP23-33P21 on chro... 40 8.3
69gb|U10699.1|RNU10699 Rattus norvegicus G-protein coupled recepto... 40 8.3
70dbj|AP000254.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.3
71dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.3 
>ref|XM_483424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3428

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 126  tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 185
            |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 3253 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 3194

                                                        
Query: 186  cttctccaccggtaacctagcaggagaattccagtcttgctgct 229
            |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 3193 cttctccaccggtaacctcgccggagagttccaatcctgctgct 3150



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 337  ttctcggagagaagggacttcagggagacatggctcttgtctgaat 382
            ||||||||||| ||||||||||| ||||| ||| ||||||||||||
Sbjct: 3021 ttctcggagaggagggacttcagtgagacgtggttcttgtctgaat 2976



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 487  tcttccttctgcttcttttcttcaacat 514
            ||||||||||||||| ||||||||||||
Sbjct: 2187 tcttccttctgcttcatttcttcaacat 2160



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 274  cgcctgaacgacagcacccggtccttggtgctggccttctt 314
            |||| |||||||||||| || ||||||||||| | ||||||
Sbjct: 3084 cgccggaacgacagcacgcgatccttggtgctcggcttctt 3044
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                            
Query: 126      tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 185
                |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 26136015 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 26136074

                                                            
Query: 186      cttctccaccggtaacctagcaggagaattccagtcttgctgct 229
                |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 26136075 cttctccaccggtaacctcgccggagagttccaatcctgctgct 26136118



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 337      ttctcggagagaagggacttcagggagacatggctcttgtctgaat 382
                ||||||||||| ||||||||||| ||||| ||| ||||||||||||
Sbjct: 26136247 ttctcggagaggagggacttcagtgagacgtggttcttgtctgaat 26136292



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 487      tcttccttctgcttcttttcttcaacat 514
                ||||||||||||||| ||||||||||||
Sbjct: 26137081 tcttccttctgcttcatttcttcaacat 26137108



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 274      cgcctgaacgacagcacccggtccttggtgctggccttctt 314
                |||| |||||||||||| || ||||||||||| | ||||||
Sbjct: 26136184 cgccggaacgacagcacgcgatccttggtgctcggcttctt 26136224
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                         
Query: 126   tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 185
             |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 79946 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 80005

                                                         
Query: 186   cttctccaccggtaacctagcaggagaattccagtcttgctgct 229
             |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 80006 cttctccaccggtaacctcgccggagagttccaatcctgctgct 80049



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 337   ttctcggagagaagggacttcagggagacatggctcttgtctgaat 382
             ||||||||||| ||||||||||| ||||| ||| ||||||||||||
Sbjct: 80178 ttctcggagaggagggacttcagtgagacgtggttcttgtctgaat 80223



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 487   tcttccttctgcttcttttcttcaacat 514
             ||||||||||||||| ||||||||||||
Sbjct: 81012 tcttccttctgcttcatttcttcaacat 81039



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 274   cgcctgaacgacagcacccggtccttggtgctggccttctt 314
             |||| |||||||||||| || ||||||||||| | ||||||
Sbjct: 80115 cgccggaacgacagcacgcgatccttggtgctcggcttctt 80155
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>dbj|AK069638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026J04, full
            insert sequence
          Length = 3431

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 126  tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 185
            |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 3254 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 3195

                                                        
Query: 186  cttctccaccggtaacctagcaggagaattccagtcttgctgct 229
            |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 3194 cttctccaccggtaacctcgccggagagttccaatcctgctgct 3151



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 337  ttctcggagagaagggacttcagggagacatggctcttgtctgaat 382
            ||||||||||| ||||||||||| ||||| ||| ||||||||||||
Sbjct: 3022 ttctcggagaggagggacttcagtgagacgtggttcttgtctgaat 2977



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 487  tcttccttctgcttcttttcttcaacat 514
            ||||||||||||||| ||||||||||||
Sbjct: 2188 tcttccttctgcttcatttcttcaacat 2161



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 274  cgcctgaacgacagcacccggtccttggtgctggccttctt 314
            |||| |||||||||||| || ||||||||||| | ||||||
Sbjct: 3085 cgccggaacgacagcacgcgatccttggtgctcggcttctt 3045
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>dbj|AK058552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C10, full
            insert sequence
          Length = 1195

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 126  tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 185
            |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 1046 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 987

                                                        
Query: 186  cttctccaccggtaacctagcaggagaattccagtcttgctgct 229
            |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 986  cttctccaccggtaacctcgccggagagttccaatcctgctgct 943



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 337 ttctcggagagaagggacttcagggagacatggctcttgtctgaat 382
           ||||||||||| |||| |||||| ||||| ||| ||||||||||||
Sbjct: 814 ttctcggagaggaggggcttcagtgagacgtggttcttgtctgaat 769
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>gb|AY111604.1| Zea mays CL11280_1 mRNA sequence
          Length = 517

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 135 ggagtggcagcaaataaacggcatccactgctgcttctt 173
           |||||||||||| || |||||||||||| ||||||||||
Sbjct: 287 ggagtggcagcagatgaacggcatccacggctgcttctt 325
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>gb|AC090363.16| Homo sapiens chromosome 18, clone RP11-885J19, complete sequence
          Length = 152200

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 284   acagcacccggtccttggtgctggccttctt 314
             |||| |||||||||||||| |||||||||||
Sbjct: 51081 acagtacccggtccttggttctggccttctt 51111
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>gb|AC103814.2| Homo sapiens chromosome 18, clone CTD-3111I19, complete sequence
          Length = 172461

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 284   acagcacccggtccttggtgctggccttctt 314
             |||| |||||||||||||| |||||||||||
Sbjct: 86593 acagtacccggtccttggttctggccttctt 86623
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 407    tctcttcatgcggatggtcat 427
              |||||||||||||||||||||
Sbjct: 442112 tctcttcatgcggatggtcat 442092
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 407    tctcttcatgcggatggtcat 427
              |||||||||||||||||||||
Sbjct: 441924 tctcttcatgcggatggtcat 441904
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>gb|AC134582.5| Mus musculus BAC clone RP24-90M17 from chromosome 15, complete sequence
          Length = 175584

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 94     taatataaactccagaaagac 114
              |||||||||||||||||||||
Sbjct: 170843 taatataaactccagaaagac 170823
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>ref|XM_755932.1| Ustilago maydis 521 hypothetical protein (UM04878.1) partial mRNA
          Length = 16296

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 481   gcagtctcttccttctgcttcttttcttcaaca 513
             |||||||||||  |||||||||| |||||||||
Sbjct: 14270 gcagtctcttcagtctgcttcttgtcttcaaca 14238
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>gb|AC007321.2| Homo sapiens BAC clone RP11-507C1 from 7, complete sequence
          Length = 158770

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   gcttcttttcttcaacatcat 517
             |||||||||||||||||||||
Sbjct: 44168 gcttcttttcttcaacatcat 44148
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>gb|AC146192.2| Pan troglodytes BAC clone RP43-35D13 from 7, complete sequence
          Length = 178260

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   gcttcttttcttcaacatcat 517
             |||||||||||||||||||||
Sbjct: 63846 gcttcttttcttcaacatcat 63826
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>emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chromosome 9 Contains the 3'
              end of the gene for KIAA1529 protein, the 5' end of a gene
              for tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP), a
              pseudogene similar to part of ral guanine nucleotide
              dissociation stimulator (RALGDS) and two CpG islands,
              complete sequence
          Length = 165432

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 99     taaactccagaaagaccccca 119
              |||||||||||||||||||||
Sbjct: 126611 taaactccagaaagaccccca 126631
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>emb|AL359712.12| Human DNA sequence from clone RP11-352J4 on chromosome 6, complete
             sequence
          Length = 56325

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 489   ttccttctgcttcttttcttc 509
             |||||||||||||||||||||
Sbjct: 42731 ttccttctgcttcttttcttc 42711
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>gb|AC067796.11| Homo sapiens chromosome 18, clone RP11-609K12, complete sequence
          Length = 201861

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   cttggtattggtctctgctgc 482
             |||||||||||||||||||||
Sbjct: 12135 cttggtattggtctctgctgc 12115
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>gb|AC090366.8| Homo sapiens chromosome 18, clone RP11-666O22, complete sequence
          Length = 97817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   cttggtattggtctctgctgc 482
             |||||||||||||||||||||
Sbjct: 90830 cttggtattggtctctgctgc 90810
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>gb|AY623664.1| Mycobacterium marinum mycobacterial enhanced infection locus 2 (mel2)
            genomic sequence
          Length = 7931

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 223  tgctgctcggaacctggcttggcgg 247
            ||||| |||||||||||||||||||
Sbjct: 7746 tgctgatcggaacctggcttggcgg 7722
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>gb|AC121355.9| Mus musculus chromosome 15, clone RP24-434C10, complete sequence
          Length = 124054

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    taatataaactccagaaagac 114
             |||||||||||||||||||||
Sbjct: 73832 taatataaactccagaaagac 73852
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>dbj|AP002498.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2547H18, complete
              sequence
          Length = 124000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 545    tttcatcctgcttctcttctt 565
              |||||||||||||||||||||
Sbjct: 117067 tttcatcctgcttctcttctt 117047
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>ref|NM_017192.1| Rattus norvegicus endothelial differentiation, sphingolipid
            G-protein-coupled receptor, 5 (Edg5), mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  actgctgcttcttccctttc 180
            ||||||||||||||||||||
Sbjct: 1764 actgctgcttcttccctttc 1783
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 136   gagtggcagcaaataaacggcatccactgctgcttc 171
             ||||| |||||||| |||||||||||  ||||||||
Sbjct: 63946 gagtgacagcaaatgaacggcatccatggctgcttc 63981
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tcgacgatcggcgcctgaac 282
              ||||||||||||||||||||
Sbjct: 355162 tcgacgatcggcgcctgaac 355143
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>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 309    cttcttttctttaataacttccat 332
              |||||||||||||| |||||||||
Sbjct: 111397 cttcttttctttaagaacttccat 111374
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     tcgacgatcggcgcctgaac 282
               ||||||||||||||||||||
Sbjct: 1085714 tcgacgatcggcgcctgaac 1085695
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>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
             complete sequence
          Length = 143073

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gtcatttccttatctgtgat 407
             ||||||||||||||||||||
Sbjct: 69973 gtcatttccttatctgtgat 69992
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     tccttggtgctggccttctt 314
               ||||||||||||||||||||
Sbjct: 5898410 tccttggtgctggccttctt 5898391
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>ref|NM_001032714.1| Takifugu rubripes XK-related protein 4 (XRG4), mRNA
          Length = 1804

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 493  ttctgcttcttttcttcaacatca 516
            ||||| ||||||||||||||||||
Sbjct: 1675 ttctgtttcttttcttcaacatca 1698
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>gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, complete sequence
          Length = 211758

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    ttccttctgcttcttttctt 508
              ||||||||||||||||||||
Sbjct: 144115 ttccttctgcttcttttctt 144096
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>gb|BT011392.1| Drosophila melanogaster AT28457 full insert cDNA
          Length = 2453

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 309 cttcttttctttaataacttccat 332
           |||||||||||||| |||||||||
Sbjct: 98  cttcttttctttaagaacttccat 75
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>gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome 14, complete sequence
          Length = 176214

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   ctcttccttctgcttcttttcttc 509
             ||||||||||| ||||||||||||
Sbjct: 84474 ctcttccttctccttcttttcttc 84451
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>gb|AC144509.3| Mus musculus BAC clone RP23-394G5 from chromosome 5, complete sequence
          Length = 181316

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    gtgctggccttcttttctttaata 324
              |||||||| |||||||||||||||
Sbjct: 130591 gtgctggctttcttttctttaata 130614
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>gb|AC091092.3| Papio anubis clone RP41-191D8, complete sequence
          Length = 167732

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   ctcttccttctgcttcttttcttc 509
             ||||||||||| ||||||||||||
Sbjct: 27427 ctcttccttcttcttcttttcttc 27450
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>gb|AC116142.8| Mus musculus chromosome 5, clone RP23-140B23, complete sequence
          Length = 187461

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 301   gtgctggccttcttttctttaata 324
             |||||||| |||||||||||||||
Sbjct: 14004 gtgctggctttcttttctttaata 14027
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>emb|AL451082.6| Human DNA sequence from clone RP11-307B16 on chromosome 1 Contains the
             5' end of the PPFIA4 gene for eceptor type protein
             tyrosine phosphatase f polypeptide (PTPRF) interacting
             protein (liprin) alpha 4, complete sequence
          Length = 64355

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   ccttttcatcctgcttctct 561
             ||||||||||||||||||||
Sbjct: 20569 ccttttcatcctgcttctct 20588
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tcgacgatcggcgcctgaac 282
              ||||||||||||||||||||
Sbjct: 966688 tcgacgatcggcgcctgaac 966669
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>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    cttcttttcttcaacatcat 517
              ||||||||||||||||||||
Sbjct: 117054 cttcttttcttcaacatcat 117035
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>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project)
          Length = 114367

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    cttcttttcttcaacatcat 517
              ||||||||||||||||||||
Sbjct: 108534 cttcttttcttcaacatcat 108515
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>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
          Length = 125502

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 498  cttcttttcttcaacatcat 517
            ||||||||||||||||||||
Sbjct: 7365 cttcttttcttcaacatcat 7346
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>emb|AJ441131.1|AGA441131 Anopheles gambiae BAC clone 8N20
          Length = 129790

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 578   tgccctgtggtgtgctgctc 597
             ||||||||||||||||||||
Sbjct: 96434 tgccctgtggtgtgctgctc 96415
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>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3
          Length = 95527

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 578   tgccctgtggtgtgctgctc 597
             ||||||||||||||||||||
Sbjct: 39643 tgccctgtggtgtgctgctc 39624
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>ref|NM_169452.1| Drosophila melanogaster dpr17 CG31361-RB, transcript variant B
           (dpr17), mRNA
          Length = 2665

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 309 cttcttttctttaataacttccat 332
           |||||||||||||| |||||||||
Sbjct: 98  cttcttttctttaagaacttccat 75
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>gb|AC105940.2| Homo sapiens chromosome 1 clone RP11-335O13, complete sequence
          Length = 177140

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   ccttttcatcctgcttctct 561
             ||||||||||||||||||||
Sbjct: 10315 ccttttcatcctgcttctct 10334
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>gb|AC084114.8| Homo sapiens chromosome 8, clone RP11-1059L18, complete sequence
          Length = 189127

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   cttcttttcttcaacatcat 517
             ||||||||||||||||||||
Sbjct: 98189 cttcttttcttcaacatcat 98208
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>gb|AC007636.19| Mus musculus strain RIII Fibroblast cell line C127 chromosome 6 clone
             mgsriii-p1_4, complete sequence
          Length = 78651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ttccttctgcttcttttctt 508
             ||||||||||||||||||||
Sbjct: 18473 ttccttctgcttcttttctt 18454
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>gb|AC010261.5| Homo sapiens chromosome 5 clone CTC-459M5, complete sequence
          Length = 146017

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   tctcttccttctgcttcttt 504
             ||||||||||||||||||||
Sbjct: 93736 tctcttccttctgcttcttt 93717
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 136      gagtggcagcaaataaacggcatccactgctgcttc 171
                ||||| |||||||| |||||||||||  ||||||||
Sbjct: 19132926 gagtgacagcaaatgaacggcatccatggctgcttc 19132961
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 388      gtcatttccttatctgtgat 407
                ||||||||||||||||||||
Sbjct: 25429612 gtcatttccttatctgtgat 25429631
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>gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, complete sequence
          Length = 163948

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   gagaagggacttcagggaga 364
             ||||||||||||||||||||
Sbjct: 75410 gagaagggacttcagggaga 75429
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>gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown, complete sequence
          Length = 136653

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     aatataaactccagaaagac 114
              ||||||||||||||||||||
Sbjct: 105863 aatataaactccagaaagac 105844
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>gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G18, complete sequence
          Length = 136653

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     aatataaactccagaaagac 114
              ||||||||||||||||||||
Sbjct: 105863 aatataaactccagaaagac 105844
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>dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 2/28, complete
             sequence
          Length = 149298

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aatataaactccagaaagac 114
             ||||||||||||||||||||
Sbjct: 74847 aatataaactccagaaagac 74866
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>gb|AC139426.2| Homo sapiens chromosome 15, clone RP13-395E19, complete sequence
          Length = 188448

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   ctcttccttctgcttcttttcttc 509
             ||||||||||| ||||||||||||
Sbjct: 82345 ctcttccttcttcttcttttcttc 82322
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>gb|AC021413.16| Homo sapiens chromosome 15, clone RP11-30N16, complete sequence
          Length = 199198

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 486    ctcttccttctgcttcttttcttc 509
              ||||||||||| ||||||||||||
Sbjct: 193629 ctcttccttcttcttcttttcttc 193652
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>gb|AC022816.15|AC022816 Homo sapiens chromosome 17, clone RP11-626C5, complete sequence
          Length = 95546

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   ctcttccttctgcttcttttcttc 509
             ||||||||||| ||||||||||||
Sbjct: 66297 ctcttccttcttcttcttttcttc 66274
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>dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22, map 22, complete
             sequences
          Length = 173403

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aatataaactccagaaagac 114
             ||||||||||||||||||||
Sbjct: 21097 aatataaactccagaaagac 21116
to top
>dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13, map 22, complete
              sequences
          Length = 172432

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aatataaactccagaaagac 114
              ||||||||||||||||||||
Sbjct: 151237 aatataaactccagaaagac 151256
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>dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for phospholipid scramblase 1,
             zinc finger of the cerebellum 4, zinc finger of the
             cerebellum 1, partial and complete cds
          Length = 228508

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   aaataaacggcatccactgctgct 169
             |||||||| |||||||||||||||
Sbjct: 54947 aaataaactgcatccactgctgct 54970
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>dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDB19
          Length = 90349

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   aatctattgtcatttcctta 399
             ||||||||||||||||||||
Sbjct: 50726 aatctattgtcatttcctta 50707
to top
>emb|Z82084.1|CEZK1053 Caenorhabditis elegans Cosmid ZK1053, complete sequence
          Length = 22106

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 496  tgcttcttttcttcaacatc 515
            ||||||||||||||||||||
Sbjct: 8913 tgcttcttttcttcaacatc 8932
to top
>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the complete
              sequence
          Length = 226075

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 309    cttcttttctttaataacttccat 332
              |||||||||||||| |||||||||
Sbjct: 120358 cttcttttctttaagaacttccat 120335
to top
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aatataaactccagaaagac 114
              ||||||||||||||||||||
Sbjct: 321853 aatataaactccagaaagac 321872
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>gb|AY534266.1| Takifugu rubripes XK-related protein 4 mRNA, complete cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 493  ttctgcttcttttcttcaacatca 516
            ||||| ||||||||||||||||||
Sbjct: 1675 ttctgtttcttttcttcaacatca 1698
to top
>gb|AC154677.2| Mus musculus BAC clone RP24-299I4 from chromosome 14, complete sequence
          Length = 149259

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   ttccttctgcttcttttctt 508
             ||||||||||||||||||||
Sbjct: 91207 ttccttctgcttcttttctt 91226
to top
>emb|AL954131.8| Mouse DNA sequence from clone RP23-32H12 on chromosome 2, complete
              sequence
          Length = 162456

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 486    ctcttccttctgcttcttttcttcaaca 513
              |||||||| || ||||||||||||||||
Sbjct: 136083 ctcttcctcctccttcttttcttcaaca 136110
to top
>gb|AY210783.2| Nodularia spumigena strain NSOR10 putative heat transcriptional
             repressor protein, putative beta-carotene ketolase,
             putative high light inducible protein, putative
             transposase, NdaB (ndaB), NdaA (ndaA), NdaC (ndaC), NdaD
             (ndaD), O-methyltransferase NdaE (ndaE), NdaF (ndaF), NdaG
             (ndaG), NdaH (ndaH), ABC transporter NdaI (ndaI), and
             hypothetical proteins, complete cds
          Length = 54353

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   gagtggcagcaaataaacgg 155
             ||||||||||||||||||||
Sbjct: 14720 gagtggcagcaaataaacgg 14739
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>emb|AL672019.7| Mouse DNA sequence from clone RP23-33P21 on chromosome X, complete
             sequence
          Length = 192874

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   tctcttccttctgcttcttt 504
             ||||||||||||||||||||
Sbjct: 15793 tctcttccttctgcttcttt 15774
to top
>gb|U10699.1|RNU10699 Rattus norvegicus G-protein coupled receptor pH218 mRNA, complete cds
          Length = 2754

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  actgctgcttcttccctttc 180
            ||||||||||||||||||||
Sbjct: 1764 actgctgcttcttccctttc 1783
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>dbj|AP000254.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:S322, complete sequence
          Length = 25737

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aatataaactccagaaagac 114
             ||||||||||||||||||||
Sbjct: 14731 aatataaactccagaaagac 14750
to top
>dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 11/12, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aatataaactccagaaagac 114
             ||||||||||||||||||||
Sbjct: 34841 aatataaactccagaaagac 34860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,725,449
Number of Sequences: 3902068
Number of extensions: 6725449
Number of successful extensions: 127526
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127145
Number of HSP's gapped (non-prelim): 381
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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