ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MCE1_CANGA (Q6FQ31) mRNA capping enzyme alpha subunit (mRNA guan... 47 4e-05
2MCE1_KLULA (Q6CWR0) mRNA capping enzyme alpha subunit (mRNA guan... 47 6e-05
3MCE1_YEAST (Q01159) mRNA capping enzyme alpha subunit (mRNA guan... 43 9e-04
4MCE1_ASHGO (Q755D0) mRNA capping enzyme alpha subunit (mRNA guan... 40 0.006
5MCE_PBCV1 (Q84424) mRNA capping enzyme (mRNA guanylyltransferase... 40 0.008
6MCE1_CAEEL (Q17607) mRNA capping enzyme [Includes: Polynucleotid... 36 0.11
7MCE1_YARLI (Q6C783) mRNA capping enzyme alpha subunit (mRNA guan... 32 2.1
8ADCY1_BOVIN (P19754) Adenylate cyclase type 1 (EC 4.6.1.1) (Aden... 30 7.9
9Y177_BACHD (Q9KGC7) Hypothetical protein BH0177 30 7.9

>MCE1_CANGA (Q6FQ31) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 449

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 22/63 (34%), Positives = 37/63 (58%)
 Frame = -1

Query: 602 QSSVSGKIVECSWNKQEDCWFCMRIRADKSTPNDINTYRKVMRSITDNITEDKLLAEMNE 423
           +  ++G+IVEC+ + +   W  +R R DK   N  +  +KV+ SI+D++T D L   + E
Sbjct: 340 EEPLNGRIVECTKDPETGSWTMLRFRDDKLNGNHTSVVQKVLESISDSVTIDDLAESVPE 399

Query: 422 ISS 414
           I S
Sbjct: 400 IKS 402



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>MCE1_KLULA (Q6CWR0) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 466

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 21/63 (33%), Positives = 39/63 (61%)
 Frame = -1

Query: 602 QSSVSGKIVECSWNKQEDCWFCMRIRADKSTPNDINTYRKVMRSITDNITEDKLLAEMNE 423
           +  ++G+IVECS +++   W  +R R DK   N ++  +KV+ SI D+++ D L   ++E
Sbjct: 341 EEPLNGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGDSVSLDDLEQVVDE 400

Query: 422 ISS 414
           + S
Sbjct: 401 MRS 403



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>MCE1_YEAST (Q01159) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 459

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -1

Query: 602 QSSVSGKIVECSWNKQEDCWFCMRIRADKSTPNDINTYRKVMRSITDNITEDKL 441
           +  ++G+IVEC+ N++   W  +R R DK   N  +  +KV+ SI D+++ + L
Sbjct: 344 EQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDL 397



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>MCE1_ASHGO (Q755D0) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 463

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 17/54 (31%), Positives = 34/54 (62%)
 Frame = -1

Query: 602 QSSVSGKIVECSWNKQEDCWFCMRIRADKSTPNDINTYRKVMRSITDNITEDKL 441
           +  ++G+IVEC+ +++   W  +R R DK   N ++  +KV+ SI+D++  + L
Sbjct: 340 EQPLNGRIVECAKDQETGEWKFLRFRDDKLNGNHVSVVQKVLESISDSVKLEDL 393



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>MCE_PBCV1 (Q84424) mRNA capping enzyme (mRNA guanylyltransferase) (EC|
           2.7.7.50) (GTP--RNA guanylyltransferase)
          Length = 330

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 21/50 (42%), Positives = 31/50 (62%)
 Frame = -1

Query: 587 GKIVECSWNKQEDCWFCMRIRADKSTPNDINTYRKVMRSITDNITEDKLL 438
           G IVEC +   +  W  ++ R+DK+  ND  TY K + +I +NIT D+LL
Sbjct: 277 GSIVECGF--ADGTWKYIQGRSDKNQANDRLTYEKTLLNIEENITIDELL 324



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>MCE1_CAEEL (Q17607) mRNA capping enzyme [Includes: Polynucleotide|
           5'-triphosphatase (EC 3.1.3.33) (mRNA 5'-triphosphatase)
           (TPase); mRNA guanylyltransferase (EC 2.7.7.50)
           (GTP--RNA guanylyltransferase) (GTase)]
          Length = 623

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = -1

Query: 584 KIVECSW----NKQEDCWFCMRIRADKSTPNDINTYRKVMRSITDNITEDKLLAEMNEIS 417
           KI+EC+       +   W  MR R DKS PN + T   V+ ++ + +TE  L+  +N   
Sbjct: 532 KIIECTLLVDNQGRPKEWKFMRERTDKSLPNGLRTAENVVETMVNPVTETYLIEYVNHAL 591

Query: 416 SLPMYADRKAHADRKAHAEKM 354
            +   A   AH   + H +++
Sbjct: 592 RVLKRA-AAAHRHHQIHQQQL 611



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>MCE1_YARLI (Q6C783) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 391

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -2

Query: 457 LLKTSSWPR*MKSVAFRCMPIGKLMLTGRPMPRR 356
           L+ T + PR +  + F C+   K++LTGRP+ +R
Sbjct: 121 LVLTKAEPRSLHFLMFDCLACNKILLTGRPLDKR 154



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>ADCY1_BOVIN (P19754) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase|
           type I) (ATP pyrophosphate-lyase 1)
           (Ca(2+)/calmodulin-activated adenylyl cyclase)
          Length = 1134

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -3

Query: 198 LSYIGHADCICIVPELCICFIMCPQCLISLSFGLCFEIALSALVLTVLCIVCTIL 34
           L  I  +  + ++   CICF++     + ++   CF   L+  + TVLCI   +L
Sbjct: 630 LLIIPQSVAVLLLLVFCICFLVACVLYLHITRVQCFPGCLTIQIRTVLCIFIVVL 684



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>Y177_BACHD (Q9KGC7) Hypothetical protein BH0177|
          Length = 272

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
 Frame = -3

Query: 303 TRINNAGWSL*PVYLAIINF*FQLNNSRHYTSF----SKLSYIGHADCICIVP---ELCI 145
           T  +   +++ P YL ++   F L    HY +F     +  Y  +  CI IV     + I
Sbjct: 54  TEFHPLTYTIIPTYLVVLTAHFSLGKMHHYLAFRCKDKRQWYNLNVSCIAIVTTGYSVLI 113

Query: 144 CFIMCPQCLISLSF 103
            FIM  Q L    F
Sbjct: 114 AFIMLMQSLFVFRF 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,632,356
Number of Sequences: 219361
Number of extensions: 1579792
Number of successful extensions: 3936
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3933
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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