ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4f24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC072784.1| Xenopus laevis MGC80093 protein, mRNA (cDNA clone... 1166 0.0
2gb|BC047988.1| Xenopus laevis similar to coatomer protein comple... 236 7e-59
3ref|NM_203948.1| Xenopus tropicalis coatomer protein complex, su... 167 5e-38
4gb|AC149872.2| Xenopus tropicalis clone CH216-115D10, complete s... 167 5e-38
5gb|BC064149.1| Xenopus tropicalis coatomer protein complex, subu... 167 5e-38
6emb|CR760836.2| Xenopus tropicalis finished cDNA, clone TTpA002p21 167 5e-38
7emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chr... 50 0.009
8ref|XM_418830.1| PREDICTED: Gallus gallus similar to hypothetica... 46 0.14
9gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complet... 46 0.14
10emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chr... 44 0.54
11emb|AL096792.5|HS1067P23 Human DNA sequence from clone RP5-1067P... 44 0.54
12emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chro... 44 0.54
13gb|AC008409.5| Homo sapiens chromosome 5 clone CTC-279L15, compl... 44 0.54
14gb|AC012294.15| Mus musculus chromosome 11, clone RP23-328G11, c... 44 0.54
15gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosom... 44 0.54
16gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosom... 44 0.54
17gb|AC156459.2| Mus musculus BAC clone RP23-269A9 from chromosome... 44 0.54
18gb|AC154219.1| Mus musculus BAC clone RP24-362C22 from 13, compl... 44 0.54
19gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, comp... 42 2.1
20gb|AC102342.10| Mus musculus chromosome 18, clone RP23-250K3, co... 42 2.1
21gb|AC129193.4| Mus musculus BAC clone RP24-136L12 from chromosom... 42 2.1
22gb|AC132269.3| Mus musculus BAC clone RP24-409M22 from chromosom... 42 2.1
23gb|AC123864.4| Mus musculus BAC clone RP23-365B24 from chromosom... 42 2.1
24gb|AC121987.2| Mus musculus BAC clone RP24-294E6 from 9, complet... 42 2.1
25gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chrom... 42 2.1
26gb|AC092035.2| Homo sapiens chromosome 3 clone RP11-72H11, compl... 42 2.1
27gb|AC118192.13| Mus musculus chromosome 1, clone RP23-200C17, co... 42 2.1
28gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Can... 42 2.1
29gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4 42 2.1
30dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.1
31emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, c... 42 2.1
32gb|AC140328.3| Mus musculus BAC clone RP23-404L15 from 8, comple... 42 2.1
33gb|AC163389.2| Mus musculus chromosome 1, clone RP23-397E23, com... 42 2.1
34emb|AL672046.4| Mouse DNA sequence from clone RP23-299F14 on chr... 42 2.1
35emb|AL670181.6| Mouse DNA sequence from clone RP23-216P24 on chr... 42 2.1
36emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chr... 42 2.1
37gb|AC112139.31| Mus musculus strain C57BL/6J clone rp23-170m6 ma... 40 8.4
38gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 8.4
39gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosom... 40 8.4
40gb|AC163349.3| Mus musculus BAC clone RP23-188F5 from chromosome... 40 8.4
41gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, com... 40 8.4
42gb|AC134336.2| Mus musculus BAC clone RP23-134A10 from chromosom... 40 8.4
43gb|AC131713.3| Mus musculus BAC clone RP23-193O18 from chromosom... 40 8.4
44gb|AC132421.4| Mus musculus BAC clone RP23-294G5 from chromosome... 40 8.4
45gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome... 40 8.4
46gb|U11280.1| Caenorhabditis elegans cosmid T17E9, complete sequence 40 8.4
47ref|XM_532613.2| PREDICTED: Canis familiaris similar to protein ... 40 8.4
48ref|XM_857945.1| PREDICTED: Canis familiaris similar to protein ... 40 8.4
49ref|XM_857919.1| PREDICTED: Canis familiaris similar to protein ... 40 8.4
50ref|XM_857894.1| PREDICTED: Canis familiaris similar to protein ... 40 8.4
51ref|XM_857873.1| PREDICTED: Canis familiaris similar to protein ... 40 8.4
52gb|AC146007.2| Pan troglodytes BAC clone RP43-165B16 from 7, com... 40 8.4
53gb|AC131735.3| Mus musculus BAC clone RP23-103D3 from 2, complet... 40 8.4
54gb|AC131663.3| Mus musculus BAC clone RP23-258B18 from 6, comple... 40 8.4
55gb|AY217096.1| Escherichia coli O128:B12 O-antigen gene cluster,... 40 8.4
56gb|AC006378.2| Homo sapiens BAC clone RP11-455I9 from 7, complet... 40 8.4
57emb|CR680767.2|CNS0FO8B Tetraodon nigroviridis full-length cDNA 40 8.4
58emb|CR679633.2|CNS0FNCT Tetraodon nigroviridis full-length cDNA 40 8.4
59emb|CR679228.2|CNS0FN1K Tetraodon nigroviridis full-length cDNA 40 8.4
60emb|CR672237.2|CNS0FHO3 Tetraodon nigroviridis full-length cDNA 40 8.4
61emb|CR659149.2|CNS0F7KJ Tetraodon nigroviridis full-length cDNA 40 8.4
62emb|CR657702.2|CNS0F6GC Tetraodon nigroviridis full-length cDNA 40 8.4
63gb|AC158684.7| Mus musculus 6 BAC RP23-332N21 (Roswell Park Canc... 40 8.4
64emb|AL360267.10| Human DNA sequence from clone RP11-342C20 on ch... 40 8.4
65emb|AL162430.15| Human DNA sequence from clone RP11-296A18 on ch... 40 8.4
66emb|AL118516.10|HSBK29F11 Human DNA sequence from clone CTA-29F1... 40 8.4
67gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cance... 40 8.4
68gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, comp... 40 8.4
69emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ... 40 8.4
70gb|AC161888.5| Mus musculus 6 BAC RP23-448G18 (Roswell Park Canc... 40 8.4
71gb|AC174356.5| Medicago truncatula clone mth2-18j17, complete se... 40 8.4
72gb|AC010319.10| Homo sapiens chromosome 19 clone CTD-2521M24, co... 40 8.4
73dbj|AK097260.1| Homo sapiens cDNA FLJ39941 fis, clone SPLEN2022591 40 8.4
74gb|AC116634.5| Homo sapiens BAC clone RP11-462G13 from 4, comple... 40 8.4
75gb|AC016920.14| Homo sapiens 3 BAC RP11-203L15 (Roswell Park Can... 40 8.4
76gb|AC150893.3| Mus musculus BAC clone RP24-403H13 from chromosom... 40 8.4
77gb|AY550964.1| Sparus aurata troponin 1-like protein mRNA, compl... 40 8.4
78gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 8.4
79gb|AC158679.8| Mus musculus 6 BAC RP23-345O17 (Roswell Park Canc... 40 8.4
80emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 i... 40 8.4
81gb|AC007883.3| Homo sapiens BAC clone RP11-508L23 from 2, comple... 40 8.4
82gb|AC147324.3| Pan troglodytes BAC clone RP43-41B9 from chromoso... 40 8.4
83gb|AF189151.1|AF189151 Klebsiella pneumoniae O5 wb gene cluster,... 40 8.4
84emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in ... 40 8.4
85emb|BX649586.4| Zebrafish DNA sequence from clone CH211-1A22 in ... 40 8.4
86emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in... 40 8.4
87emb|BX279523.5| Zebrafish DNA sequence from clone CH211-63O20 in... 40 8.4
88gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, com... 40 8.4
89emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 8.4
90emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chro... 40 8.4
91gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 8.4
92gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.4
93emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chro... 40 8.4
94emb|AL021811.1|ATF10M6 Arabidopsis thaliana DNA chromosome 4, BA... 40 8.4
95gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, comple... 40 8.4
96emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on ch... 40 8.4
97emb|AL844211.6| Mouse DNA sequence from clone RP23-394O8 on chro... 40 8.4
98emb|AL671321.16| Mouse DNA sequence from clone RP23-274I19 on ch... 40 8.4
99emb|AL731708.17| Mouse DNA sequence from clone RP23-103D3 on chr... 40 8.4
100emb|AL805911.6| Mouse DNA sequence from clone RP23-71K8 on chrom... 40 8.4 
>gb|BC072784.1| Xenopus laevis MGC80093 protein, mRNA (cDNA clone MGC:80093
            IMAGE:4963471), complete cds
          Length = 1243

 Score = 1166 bits (588), Expect = 0.0
 Identities = 604/610 (99%)
 Strand = Plus / Minus

                                                                        
Query: 5    tacccaatttttaacagggtttccctcttacagaaggcaagagagtctgctcattatgaa 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1110 tacccaatttttaacagggtttccctcttacagaaggcaagagagtctgctcattctgaa 1051

                                                                        
Query: 65   tgcaaatgatccacttatctgncacttacaggtttgaggaaacaaaacaagaattgttct 124
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tgcaaatgatccacttatctgccacttacaggtttgaggaaacaaaacaagaattgttct 991

                                                                        
Query: 125  gatggagtagaaacctgatgaatgaccttgatgaaatcccctcctaccctctgagaacgg 184
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990  aatggagtagaaacctgatgaatgaccttgatgaaatcccctcctaccctctgagaacgg 931

                                                                        
Query: 185  gaaatcttatatacatcaaatgaaagtgaaggcttgatttaagccatgctgcaggcgctg 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930  gaaatcttatatacatcaaatgaaagtgaaggcttgatttaagccatgctgcaggcgctg 871

                                                                        
Query: 245  ctttctgaatgtctgcgattctaccctgcagcttgccatagtatttctcatttggacatt 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870  ctttctgaatgtctgcgattctaccctgcagcttgccatagtatttctcatttggacatt 811

                                                                        
Query: 305  tagatttctaacttgctgcttttgctttgggataaaataaatgaaacatttgcaaaagga 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810  tagatttctaacttgctgcttttgctttgggataaaataaatgaaacatttgcaaaagga 751

                                                                        
Query: 365  aaatcaatctcagaagaaggtgtaagactgtgggtctgggaccaccaaatgcacttaaat 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750  aaatcaatctcagaagaaggtgtaagactgtgggtctgggaccaccaaatgcacttaaat 691

                                                                        
Query: 425  acaacaagattccattaaataaatcagtgcaacagatctactgtagtggccaaatgcagt 484
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 690  acaacaagattccattaattaaatcagtgcaacagatctactgtagtggccaaatgcagt 631

                                                                        
Query: 485  tggtcagagattgggggcaaagagggagagcagcagtaggccccataaagatggaatgaa 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630  tggtcagagattgggggcaaagagggagagcagcagtaggccccataaagatggaatgaa 571

                                                                        
Query: 545  tgatggacttgtgcaggtcancagacaccaactaccggagaggggaccacttgatttgct 604
            |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 570  tgatggacttgtgcaggtcagcagacaccaactaccggagaagggaccacttgatttgct 511

                      
Query: 605  cttttgcaga 614
            ||||||||||
Sbjct: 510  cttttgcaga 501
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>gb|BC047988.1| Xenopus laevis similar to coatomer protein complex, subunit zeta 1,
           mRNA (cDNA clone IMAGE:5569945), partial cds
          Length = 2006

 Score =  236 bits (119), Expect = 7e-59
 Identities = 157/170 (92%)
 Strand = Plus / Minus

                                                                       
Query: 445 aaatcagtgcaacagatctactgtagtggccaaatgcagttggtcagagattgggggcaa 504
           |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 697 aaatcagtgcaacagatctaatgaagtggccaaatgcagttggtcagagaatgggggcaa 638

                                                                       
Query: 505 agagggagagcagcagtaggccccataaagatggaatgaatgatggacttgtgcaggtca 564
           ||||||| |||||||| ||||||||||| | ||||| |||||||||||||||||||||  
Sbjct: 637 agagggacagcagcagcaggccccataatggtggaaggaatgatggacttgtgcaggttg 578

                                                             
Query: 565 ncagacaccaactaccggagaggggaccacttgatttgctcttttgcaga 614
            | |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 577 gccgacaccaactaccggagaagggaccacttgatttgctcttttgcaga 528



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 393 tgtgggtctgggaccaccaaatgcacttaaatacaacaagattccattaa 442
           ||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 760 tgtgggtgtgggaccaccaaatgcacctaaatacaacaagattccattaa 711



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                
Query: 26   tccctcttacagaaggcaagagagtctgctcattat 61
            ||||||| ||||||||||||||||||||||||||||
Sbjct: 1859 tccctctaacagaaggcaagagagtctgctcattat 1824



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 327 tgctttgggataaaataaatgaaacatttgcaaaaggaaaa 367
           |||||||| ||||||||||||||||||||  ||||||||||
Sbjct: 816 tgctttggaataaaataaatgaaacatttttaaaaggaaaa 776



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 61   tgaatgcaaatgatccacttatctgncactta 92
            ||||||||||||| ||||||||||| ||||||
Sbjct: 1787 tgaatgcaaatgaaccacttatctggcactta 1756



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 200 tcaaatgaaagtgaaggcttgatttaagccatgctgca 237
           ||||||||||||  ||| |||||||| |||||||||||
Sbjct: 968 tcaaatgaaagtcgaggtttgatttaggccatgctgca 931
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>ref|NM_203948.1| Xenopus tropicalis coatomer protein complex, subunit zeta 2
           (copz2), mRNA
          Length = 1361

 Score =  167 bits (84), Expect = 5e-38
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                       
Query: 448 tcagtgcaacagatctactgtagtggccaaatgcagttggtcagagattgggggcaaaga 507
           ||||||||| |||||||   ||| |||| |||||| ||||||  ||| ||||| ||||||
Sbjct: 682 tcagtgcaagagatctaacttagcggccgaatgcaattggtcgaagaatggggacaaaga 623

                                                                       
Query: 508 gggagagcagcagtaggccccataaagatggaatgaatgatggacttgtgcaggtcanca 567
            ||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |  ||
Sbjct: 622 aggacagcagctgtgggccccataaagatggaatgaatgatggactagtgcaggccggca 563

                                                          
Query: 568 gacaccaactaccggagaggggaccacttgatttgctcttttgcaga 614
           ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 562 gacgccaactaccggagaagggaccacttgatttgctcttttgcaga 516



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 149/182 (81%), Gaps = 7/182 (3%)
 Strand = Plus / Minus

                                                                        
Query: 61   tgaatgcaaatgatccacttatctgncacttacaggtttgaggaaacaaaaca----aga 116
            ||||||||||||||||  | || || |||||| |||| | ||||| |||||||    |||
Sbjct: 1112 tgaatgcaaatgatccgttcatttggcacttagaggtctcaggaagcaaaacacacaaga 1053

                                                                        
Query: 117  attgttctgatggagtagaaacctgatgaatgaccttgatgaaatcccctcctaccctct 176
            |||||||||   ||| ||||||||||||||||| || ||| |||| || || ||||  ||
Sbjct: 1052 attgttctgccagagcagaaacctgatgaatgatctcgataaaattcc-tcttacctact 994

                                                                        
Query: 177  gagaacgggaaatc--ttatatacatcaaatgaaagtgaaggcttgatttaagccatgct 234
            ||||| |||| |||  |||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct: 993  gagaatgggacatcatttatttacatcaagtgaaagtgaaggcttgatttaggccatact 934

              
Query: 235  gc 236
            ||
Sbjct: 933  gc 932



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 14   tttaacagggtttccctcttacagaaggcaagagagtctg 53
            ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1199 tttaacaaggtttccctctaacagaaggcaagagagtctg 1160



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 325 tttgctttgggataaaataaatgaaacatttgcaaaaggaaaa 367
           ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 810 tttgctttgggaggaaataaatgaaacatttgtaaaaggaaaa 768
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>gb|AC149872.2| Xenopus tropicalis clone CH216-115D10, complete sequence
          Length = 194934

 Score =  167 bits (84), Expect = 5e-38
 Identities = 146/167 (87%)
 Strand = Plus / Plus

                                                                          
Query: 448    tcagtgcaacagatctactgtagtggccaaatgcagttggtcagagattgggggcaaaga 507
              ||||||||| |||||||   ||| |||| |||||| ||||||  ||| ||||| ||||||
Sbjct: 120129 tcagtgcaagagatctaacttagcggccgaatgcaattggtcgaagaatggggacaaaga 120188

                                                                          
Query: 508    gggagagcagcagtaggccccataaagatggaatgaatgatggacttgtgcaggtcanca 567
               ||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |  ||
Sbjct: 120189 aggacagcagctgtgggccccataaagatggaatgaatgatggactagtgcaggccggca 120248

                                                             
Query: 568    gacaccaactaccggagaggggaccacttgatttgctcttttgcaga 614
              ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 120249 gacgccaactaccggagaagggaccacttgatttgctcttttgcaga 120295



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 108/128 (84%), Gaps = 3/128 (2%)
 Strand = Plus / Plus

                                                                          
Query: 111    acaagaattgttctgatggagtagaaacctgatgaatgaccttgatgaaatcccctccta 170
              |||||||||||||||   ||| ||||||||||||||||| || ||| |||| || || ||
Sbjct: 119752 acaagaattgttctgccagagcagaaacctgatgaatgatctcgataaaattcc-tctta 119810

                                                                          
Query: 171    ccctctgagaacgggaaatc--ttatatacatcaaatgaaagtgaaggcttgatttaagc 228
              ||  ||||||| |||| |||  |||| |||||||| ||||||||||||||||||||| ||
Sbjct: 119811 cctactgagaatgggacatcatttatttacatcaagtgaaagtgaaggcttgatttaggc 119870

                      
Query: 229    catgctgc 236
              ||| ||||
Sbjct: 119871 catactgc 119878



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                      
Query: 14     tttaacagggtttccctcttacagaaggcaagagagtctg 53
              ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 119611 tttaacaaggtttccctctaacagaaggcaagagagtctg 119650



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                         
Query: 325    tttgctttgggataaaataaatgaaacatttgcaaaaggaaaa 367
              ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 120000 tttgctttgggaggaaataaatgaaacatttgtaaaaggaaaa 120042
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>gb|BC064149.1| Xenopus tropicalis coatomer protein complex, subunit zeta 2, mRNA
           (cDNA clone MGC:75577 IMAGE:5379111), complete cds
          Length = 1361

 Score =  167 bits (84), Expect = 5e-38
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                       
Query: 448 tcagtgcaacagatctactgtagtggccaaatgcagttggtcagagattgggggcaaaga 507
           ||||||||| |||||||   ||| |||| |||||| ||||||  ||| ||||| ||||||
Sbjct: 682 tcagtgcaagagatctaacttagcggccgaatgcaattggtcgaagaatggggacaaaga 623

                                                                       
Query: 508 gggagagcagcagtaggccccataaagatggaatgaatgatggacttgtgcaggtcanca 567
            ||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |  ||
Sbjct: 622 aggacagcagctgtgggccccataaagatggaatgaatgatggactagtgcaggccggca 563

                                                          
Query: 568 gacaccaactaccggagaggggaccacttgatttgctcttttgcaga 614
           ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 562 gacgccaactaccggagaagggaccacttgatttgctcttttgcaga 516



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 149/182 (81%), Gaps = 7/182 (3%)
 Strand = Plus / Minus

                                                                        
Query: 61   tgaatgcaaatgatccacttatctgncacttacaggtttgaggaaacaaaaca----aga 116
            ||||||||||||||||  | || || |||||| |||| | ||||| |||||||    |||
Sbjct: 1112 tgaatgcaaatgatccgttcatttggcacttagaggtctcaggaagcaaaacacacaaga 1053

                                                                        
Query: 117  attgttctgatggagtagaaacctgatgaatgaccttgatgaaatcccctcctaccctct 176
            |||||||||   ||| ||||||||||||||||| || ||| |||| || || ||||  ||
Sbjct: 1052 attgttctgccagagcagaaacctgatgaatgatctcgataaaattcc-tcttacctact 994

                                                                        
Query: 177  gagaacgggaaatc--ttatatacatcaaatgaaagtgaaggcttgatttaagccatgct 234
            ||||| |||| |||  |||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct: 993  gagaatgggacatcatttatttacatcaagtgaaagtgaaggcttgatttaggccatact 934

              
Query: 235  gc 236
            ||
Sbjct: 933  gc 932



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 14   tttaacagggtttccctcttacagaaggcaagagagtctg 53
            ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1199 tttaacaaggtttccctctaacagaaggcaagagagtctg 1160



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 325 tttgctttgggataaaataaatgaaacatttgcaaaaggaaaa 367
           ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 810 tttgctttgggaggaaataaatgaaacatttgtaaaaggaaaa 768
to top
>emb|CR760836.2| Xenopus tropicalis finished cDNA, clone TTpA002p21
          Length = 1300

 Score =  167 bits (84), Expect = 5e-38
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                       
Query: 448 tcagtgcaacagatctactgtagtggccaaatgcagttggtcagagattgggggcaaaga 507
           ||||||||| |||||||   ||| |||| |||||| ||||||  ||| ||||| ||||||
Sbjct: 666 tcagtgcaagagatctaacttagcggccgaatgcaattggtcgaagaatggggacaaaga 607

                                                                       
Query: 508 gggagagcagcagtaggccccataaagatggaatgaatgatggacttgtgcaggtcanca 567
            ||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |  ||
Sbjct: 606 aggacagcagctgtgggccccataaagatggaatgaatgatggactagtgcaggccggca 547

                                                          
Query: 568 gacaccaactaccggagaggggaccacttgatttgctcttttgcaga 614
           ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 546 gacgccaactaccggagaagggaccacttgatttgctcttttgcaga 500



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 149/182 (81%), Gaps = 7/182 (3%)
 Strand = Plus / Minus

                                                                        
Query: 61   tgaatgcaaatgatccacttatctgncacttacaggtttgaggaaacaaaaca----aga 116
            ||||||||||||||||  | || || |||||| |||| | ||||| |||||||    |||
Sbjct: 1097 tgaatgcaaatgatccgttcatttggcacttagaggtctcaggaagcaaaacacacaaga 1038

                                                                        
Query: 117  attgttctgatggagtagaaacctgatgaatgaccttgatgaaatcccctcctaccctct 176
            |||||||||   ||| ||||||||||||||||| || ||| |||| || || ||||  ||
Sbjct: 1037 attgttctgccagagcagaaacctgatgaatgatctcgataaaattcc-tcttacctact 979

                                                                        
Query: 177  gagaacgggaaatc--ttatatacatcaaatgaaagtgaaggcttgatttaagccatgct 234
            ||||| |||| |||  |||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct: 978  gagaatgggacatcatttatttacatcaagtgaaagtgaaggcttgatttaggccatact 919

              
Query: 235  gc 236
            ||
Sbjct: 918  gc 917



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 14   tttaacagggtttccctcttacagaaggcaagagagtctg 53
            ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1184 tttaacaaggtttccctctaacagaaggcaagagagtctg 1145



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 325 tttgctttgggataaaataaatgaaacatttgcaaaaggaaaa 367
           ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 795 tttgctttgggaggaaataaatgaaacatttgtaaaaggaaaa 753
to top
>emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chromosome X, complete
             sequence
          Length = 157222

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 323   cttttgctttgggataaaataaatg 347
             |||||||||||||||||||||||||
Sbjct: 52531 cttttgctttgggataaaataaatg 52555
to top
>ref|XM_418830.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC420731),
            mRNA
          Length = 2340

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 344  aatgaaacatttgcaaaaggaaaatca 370
            |||||||| ||||||||||||||||||
Sbjct: 1346 aatgaaacctttgcaaaaggaaaatca 1320
to top
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence
          Length = 155011

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 354   ttgcaaaaggaaaatcaatctcagaag 380
             ||||||||||||||| |||||||||||
Sbjct: 85305 ttgcaaaaggaaaataaatctcagaag 85279
to top
>emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chromosome 6, complete
             sequence
          Length = 60406

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 367   atcaatctcagaagaaggtgta 388
             ||||||||||||||||||||||
Sbjct: 14606 atcaatctcagaagaaggtgta 14585
to top
>emb|AL096792.5|HS1067P23 Human DNA sequence from clone RP5-1067P23 on chromosome 20 Contains
            STSs and GSSs, complete sequence
          Length = 101342

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 336  ataaaataaatgaaacatttgcaaaa 361
            ||||||||||||||||||||| ||||
Sbjct: 3280 ataaaataaatgaaacatttggaaaa 3255
to top
>emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chromosome 11 Contains two
              novel genes, the 5' end of the Accn1 gene for neuronal
              amiloride-sensitive cation channel 1 (degenerin) and the
              Ccl2 and Ccl7 genes for chemokine (C-C motif) ligand 2 and
              7, complete sequence
          Length = 223726

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 186    aaatcttatatacatcaaatga 207
              ||||||||||||||||||||||
Sbjct: 121495 aaatcttatatacatcaaatga 121474
to top
>gb|AC008409.5| Homo sapiens chromosome 5 clone CTC-279L15, complete sequence
          Length = 126516

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 346   tgaaacatttgcaaaaggaaaa 367
             ||||||||||||||||||||||
Sbjct: 12816 tgaaacatttgcaaaaggaaaa 12795
to top
>gb|AC012294.15| Mus musculus chromosome 11, clone RP23-328G11, complete sequence
          Length = 222121

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 186    aaatcttatatacatcaaatga 207
              ||||||||||||||||||||||
Sbjct: 212326 aaatcttatatacatcaaatga 212305
to top
>gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosome 13, complete
             sequence
          Length = 166266

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 361   aggaaaatcaatctcagaagaa 382
             ||||||||||||||||||||||
Sbjct: 16374 aggaaaatcaatctcagaagaa 16395
to top
>gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosome 13, complete
             sequence
          Length = 175414

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 361   aggaaaatcaatctcagaagaa 382
             ||||||||||||||||||||||
Sbjct: 59373 aggaaaatcaatctcagaagaa 59352
to top
>gb|AC156459.2| Mus musculus BAC clone RP23-269A9 from chromosome 13, complete sequence
          Length = 188142

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 63    aatgcaaatgatccacttatct 84
             ||||||||||||||||||||||
Sbjct: 27502 aatgcaaatgatccacttatct 27481
to top
>gb|AC154219.1| Mus musculus BAC clone RP24-362C22 from 13, complete sequence
          Length = 175346

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 63    aatgcaaatgatccacttatct 84
             ||||||||||||||||||||||
Sbjct: 52526 aatgcaaatgatccacttatct 52547
to top
>gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, complete sequence
          Length = 166975

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    aaacaaaacaagaattgttct 124
              |||||||||||||||||||||
Sbjct: 108665 aaacaaaacaagaattgttct 108685
to top
>gb|AC102342.10| Mus musculus chromosome 18, clone RP23-250K3, complete sequence
          Length = 168009

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   aaaataaatgaaacatttgca 358
             |||||||||||||||||||||
Sbjct: 42698 aaaataaatgaaacatttgca 42718
to top
>gb|AC129193.4| Mus musculus BAC clone RP24-136L12 from chromosome 9, complete sequence
          Length = 181376

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    aggaaaatcaatctcagaaga 381
              |||||||||||||||||||||
Sbjct: 126122 aggaaaatcaatctcagaaga 126142
to top
>gb|AC132269.3| Mus musculus BAC clone RP24-409M22 from chromosome 12, complete
             sequence
          Length = 172018

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   tttgggataaaataaatgaaa 350
             |||||||||||||||||||||
Sbjct: 76323 tttgggataaaataaatgaaa 76343
to top
>gb|AC123864.4| Mus musculus BAC clone RP23-365B24 from chromosome 8, complete sequence
          Length = 128447

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    aatttttaacagggtttccct 30
             |||||||||||||||||||||
Sbjct: 91785 aatttttaacagggtttccct 91765
to top
>gb|AC121987.2| Mus musculus BAC clone RP24-294E6 from 9, complete sequence
          Length = 176642

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   aggaaaatcaatctcagaaga 381
             |||||||||||||||||||||
Sbjct: 54365 aggaaaatcaatctcagaaga 54385
to top
>gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chromosome unknown,
            complete sequence
          Length = 217064

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 12   tttttaacagggtttccctct 32
            |||||||||||||||||||||
Sbjct: 2541 tttttaacagggtttccctct 2521
to top
>gb|AC092035.2| Homo sapiens chromosome 3 clone RP11-72H11, complete sequence
          Length = 162997

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   tgggataaaataaatgaaaca 352
             |||||||||||||||||||||
Sbjct: 45011 tgggataaaataaatgaaaca 45031
to top
>gb|AC118192.13| Mus musculus chromosome 1, clone RP23-200C17, complete sequence
          Length = 187935

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     tacccaatttttaacagggtt 25
             |||||||||||||||||||||
Sbjct: 21533 tacccaatttttaacagggtt 21513
to top
>gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163111

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 532   aagatggaatgaatgatggac 552
             |||||||||||||||||||||
Sbjct: 48756 aagatggaatgaatgatggac 48736
to top
>gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4
          Length = 145744

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 143  tgaatgaccttgatgaaatcc 163
            |||||||||||||||||||||
Sbjct: 7080 tgaatgaccttgatgaaatcc 7060
to top
>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10
          Length = 83646

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   tgaatgaccttgatgaaatcc 163
             |||||||||||||||||||||
Sbjct: 31212 tgaatgaccttgatgaaatcc 31232
to top
>emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, complete sequence
          Length = 176982

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 338   aaaataaatgaaacatttgcaaaaggaaa 366
             ||||||||||||| ||||| |||||||||
Sbjct: 34316 aaaataaatgaaatatttgaaaaaggaaa 34344
to top
>gb|AC140328.3| Mus musculus BAC clone RP23-404L15 from 8, complete sequence
          Length = 194350

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     aatttttaacagggtttccct 30
              |||||||||||||||||||||
Sbjct: 146998 aatttttaacagggtttccct 147018
to top
>gb|AC163389.2| Mus musculus chromosome 1, clone RP23-397E23, complete sequence
          Length = 203933

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     tacccaatttttaacagggtt 25
             |||||||||||||||||||||
Sbjct: 87242 tacccaatttttaacagggtt 87262
to top
>emb|AL672046.4| Mouse DNA sequence from clone RP23-299F14 on chromosome X, complete
           sequence
          Length = 186272

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 101 aggaaacaaaacaagaattgt 121
           |||||||||||||||||||||
Sbjct: 52  aggaaacaaaacaagaattgt 32
to top
>emb|AL670181.6| Mouse DNA sequence from clone RP23-216P24 on chromosome X, complete
              sequence
          Length = 166660

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    aggaaacaaaacaagaattgt 121
              |||||||||||||||||||||
Sbjct: 164712 aggaaacaaaacaagaattgt 164692
to top
>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
             sequence
          Length = 224038

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   ctttgggataaaataaatgaa 349
             |||||||||||||||||||||
Sbjct: 73550 ctttgggataaaataaatgaa 73570
to top
>gb|AC112139.31| Mus musculus strain C57BL/6J clone rp23-170m6 map 6, complete sequence
          Length = 203032

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ctcattatgaatgcaaatga 73
              ||||||||||||||||||||
Sbjct: 138711 ctcattatgaatgcaaatga 138730
to top
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     ctttgggataaaataaatga 348
               ||||||||||||||||||||
Sbjct: 1673119 ctttgggataaaataaatga 1673138



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    ctttgggataaaataaatga 348
              ||||||||||||||||||||
Sbjct: 710522 ctttgggataaaataaatga 710541
to top
>gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosome 16, complete sequence
          Length = 172721

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    actgtgggtctgggaccacc 410
              ||||||||||||||||||||
Sbjct: 140350 actgtgggtctgggaccacc 140331
to top
>gb|AC163349.3| Mus musculus BAC clone RP23-188F5 from chromosome 3, complete
            sequence
          Length = 226848

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    tacccaatttttaacagggt 24
            ||||||||||||||||||||
Sbjct: 1451 tacccaatttttaacagggt 1432
to top
>gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, complete sequence
          Length = 159817

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   aacttgctgcttttgctttg 333
             ||||||||||||||||||||
Sbjct: 19621 aacttgctgcttttgctttg 19602
to top
>gb|AC134336.2| Mus musculus BAC clone RP23-134A10 from chromosome 6, complete
           sequence
          Length = 204120

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  agggtttccctcttacagaa 39
           ||||||||||||||||||||
Sbjct: 794 agggtttccctcttacagaa 775
to top
>gb|AC131713.3| Mus musculus BAC clone RP23-193O18 from chromosome 18, complete sequence
          Length = 220193

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 206177 aggaaaatcaatctcagaag 206158
to top
>gb|AC132421.4| Mus musculus BAC clone RP23-294G5 from chromosome 18, complete sequence
          Length = 229447

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 195033 aggaaaatcaatctcagaag 195052
to top
>gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome 17, complete sequence
          Length = 197143

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 147082 aggaaaatcaatctcagaag 147063
to top
>gb|U11280.1| Caenorhabditis elegans cosmid T17E9, complete sequence
          Length = 16752

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 530  taaagatggaatgaatgatg 549
            ||||||||||||||||||||
Sbjct: 3902 taaagatggaatgaatgatg 3921
to top
>ref|XM_532613.2| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase,
            receptor type, D isoform 4 precursor, transcript variant
            1 (LOC475389), mRNA
          Length = 6197

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  atttgcaaaaggaaaatcaa 371
            ||||||||||||||||||||
Sbjct: 6121 atttgcaaaaggaaaatcaa 6102
to top
>ref|XM_857945.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase,
            receptor type, D isoform 4 precursor, transcript variant
            6 (LOC475389), mRNA
          Length = 4908

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  atttgcaaaaggaaaatcaa 371
            ||||||||||||||||||||
Sbjct: 4832 atttgcaaaaggaaaatcaa 4813
to top
>ref|XM_857919.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase,
            receptor type, D isoform 4 precursor, transcript variant
            5 (LOC475389), mRNA
          Length = 4506

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  atttgcaaaaggaaaatcaa 371
            ||||||||||||||||||||
Sbjct: 4430 atttgcaaaaggaaaatcaa 4411
to top
>ref|XM_857894.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase,
            receptor type, D isoform 4 precursor, transcript variant
            4 (LOC475389), mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  atttgcaaaaggaaaatcaa 371
            ||||||||||||||||||||
Sbjct: 1157 atttgcaaaaggaaaatcaa 1138
to top
>ref|XM_857873.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase,
            receptor type, D isoform 4 precursor, transcript variant
            3 (LOC475389), mRNA
          Length = 6170

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  atttgcaaaaggaaaatcaa 371
            ||||||||||||||||||||
Sbjct: 6094 atttgcaaaaggaaaatcaa 6075
to top
>gb|AC146007.2| Pan troglodytes BAC clone RP43-165B16 from 7, complete sequence
          Length = 173047

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 338    aaaataaatgaaacatttgcaaaa 361
              ||||||||||||||||||| ||||
Sbjct: 163623 aaaataaatgaaacatttgaaaaa 163600
to top
>gb|AC131735.3| Mus musculus BAC clone RP23-103D3 from 2, complete sequence
          Length = 218830

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   ataaaataaatgaaacattt 355
             ||||||||||||||||||||
Sbjct: 90768 ataaaataaatgaaacattt 90787
to top
>gb|AC131663.3| Mus musculus BAC clone RP23-258B18 from 6, complete sequence
          Length = 191685

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     agggtttccctcttacagaa 39
              ||||||||||||||||||||
Sbjct: 105001 agggtttccctcttacagaa 105020
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>gb|AY217096.1| Escherichia coli O128:B12 O-antigen gene cluster, complete sequence
          Length = 19013

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   ttaaataaatcagtgcaaca 458
             ||||||||||||||||||||
Sbjct: 11157 ttaaataaatcagtgcaaca 11176
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>gb|AC006378.2| Homo sapiens BAC clone RP11-455I9 from 7, complete sequence
          Length = 102598

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   aaaataaatgaaacatttgcaaaa 361
             ||||||||||||||||||| ||||
Sbjct: 70321 aaaataaatgaaacatttgaaaaa 70298
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>emb|CR680767.2|CNS0FO8B Tetraodon nigroviridis full-length cDNA
          Length = 671

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 329 gccatgctgcaggcgctgct 348
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>emb|CR679633.2|CNS0FNCT Tetraodon nigroviridis full-length cDNA
          Length = 878

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 554 gccatgctgcaggcgctgct 573
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>emb|CR679228.2|CNS0FN1K Tetraodon nigroviridis full-length cDNA
          Length = 713

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 373 gccatgctgcaggcgctgct 392
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>emb|CR672237.2|CNS0FHO3 Tetraodon nigroviridis full-length cDNA
          Length = 782

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 450 gccatgctgcaggcgctgct 469
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>emb|CR659149.2|CNS0F7KJ Tetraodon nigroviridis full-length cDNA
          Length = 926

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 588 gccatgctgcaggcgctgct 607
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>emb|CR657702.2|CNS0F6GC Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 373 gccatgctgcaggcgctgct 392
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>gb|AC158684.7| Mus musculus 6 BAC RP23-332N21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210307

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 197724 aggaaaatcaatctcagaag 197743
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>emb|AL360267.10| Human DNA sequence from clone RP11-342C20 on chromosome 13 Contains a
             RNA-binding protein LIN-28 pseudogene, a novel gene and
             the 3' end of a novel gene, complete sequence
          Length = 157381

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   gacatttagatttctaactt 318
             ||||||||||||||||||||
Sbjct: 55227 gacatttagatttctaactt 55208
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>emb|AL162430.15| Human DNA sequence from clone RP11-296A18 on chromosome 1 Contains for
             novel genes, a cofilin 1 (non-muscle) (CFL1) pseudogene,
             the RNF11 gene for ring finger protein 11, a ribosomal
             protein S2 (RPS2) pseudogene and the 3' end of the C1orf34
             gene for chromosome 1 open reading frame 34, complete
             sequence
          Length = 211791

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   aatgaaacatttgcaaaaggaaaa 367
             |||||||||||||||||| |||||
Sbjct: 53637 aatgaaacatttgcaaaatgaaaa 53660
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>emb|AL118516.10|HSBK29F11 Human DNA sequence from clone CTA-29F11 on chromosome 22, complete
             sequence
          Length = 89319

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   ataaaataaatgaaacattt 355
             ||||||||||||||||||||
Sbjct: 61409 ataaaataaatgaaacattt 61390
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>gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112126

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   aggaaacaaaacaagaattgttct 124
             |||||||||||||| |||||||||
Sbjct: 99211 aggaaacaaaacaacaattgttct 99234
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>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence
          Length = 198872

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   aggaaaatcaatctcagaag 380
             ||||||||||||||||||||
Sbjct: 13250 aggaaaatcaatctcagaag 13269
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>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 340   aataaatgaaacatttgcaaaaggaaaa 367
             |||||||||||||| || ||||||||||
Sbjct: 12967 aataaatgaaacatgtggaaaaggaaaa 12940
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>gb|AC161888.5| Mus musculus 6 BAC RP23-448G18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 189867

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 136904 aggaaaatcaatctcagaag 136923
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>gb|AC174356.5| Medicago truncatula clone mth2-18j17, complete sequence
          Length = 81625

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   tttctaacttgctgcttttg 328
             ||||||||||||||||||||
Sbjct: 67083 tttctaacttgctgcttttg 67064
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>gb|AC010319.10| Homo sapiens chromosome 19 clone CTD-2521M24, complete sequence
          Length = 141370

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  aagatggaatgaatgatgga 551
            ||||||||||||||||||||
Sbjct: 6920 aagatggaatgaatgatgga 6901
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>dbj|AK097260.1| Homo sapiens cDNA FLJ39941 fis, clone SPLEN2022591
          Length = 2649

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 296  ttggacatttagatttctaacttg 319
            |||||||||||||||||| |||||
Sbjct: 2321 ttggacatttagatttctgacttg 2298
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>gb|AC116634.5| Homo sapiens BAC clone RP11-462G13 from 4, complete sequence
          Length = 85439

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ggataaaataaatgaaacat 353
             ||||||||||||||||||||
Sbjct: 28003 ggataaaataaatgaaacat 27984
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>gb|AC016920.14| Homo sapiens 3 BAC RP11-203L15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142127

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tctgatggagtagaaacctg 141
             ||||||||||||||||||||
Sbjct: 56072 tctgatggagtagaaacctg 56053
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>gb|AC150893.3| Mus musculus BAC clone RP24-403H13 from chromosome 3, complete sequence
          Length = 181373

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      tacccaatttttaacagggt 24
              ||||||||||||||||||||
Sbjct: 106199 tacccaatttttaacagggt 106218
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>gb|AY550964.1| Sparus aurata troponin 1-like protein mRNA, complete cds
          Length = 692

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gccatgctgcaggcgctgct 246
           ||||||||||||||||||||
Sbjct: 409 gccatgctgcaggcgctgct 428
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 417     acttaaatacaacaagattc 436
               ||||||||||||||||||||
Sbjct: 1214562 acttaaatacaacaagattc 1214543
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>gb|AC158679.8| Mus musculus 6 BAC RP23-345O17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 192748

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 179577 aggaaaatcaatctcagaag 179558
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>emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 in linkage group 16,
             complete sequence
          Length = 211279

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 336   ataaaataaatgaaacatttgcaa 359
             |||||||||||| |||||||||||
Sbjct: 57405 ataaaataaatgtaacatttgcaa 57428
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>gb|AC007883.3| Homo sapiens BAC clone RP11-508L23 from 2, complete sequence
          Length = 113189

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 296   ttggacatttagatttctaacttg 319
             |||||||||||||||||| |||||
Sbjct: 57055 ttggacatttagatttctgacttg 57032
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>gb|AC147324.3| Pan troglodytes BAC clone RP43-41B9 from chromosome 7, complete
             sequence
          Length = 163009

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   aaaataaatgaaacatttgcaaaa 361
             ||||||||||||||||||| ||||
Sbjct: 60200 aaaataaatgaaacatttgaaaaa 60177
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>gb|AF189151.1|AF189151 Klebsiella pneumoniae O5 wb gene cluster, complete sequence
          Length = 13144

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ctgcaggcgctgctttctga 252
            ||||||||||||||||||||
Sbjct: 5853 ctgcaggcgctgctttctga 5834
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>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19,
            complete sequence
          Length = 200523

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    atattacccaatttttaaca 20
            ||||||||||||||||||||
Sbjct: 2751 atattacccaatttttaaca 2770
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>emb|BX649586.4| Zebrafish DNA sequence from clone CH211-1A22 in linkage group 18,
             complete sequence
          Length = 128751

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 337   taaaataaatgaaacatttgcaaa 360
             ||||||||||| ||||||||||||
Sbjct: 45668 taaaataaatgtaacatttgcaaa 45691
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>emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in linkage group 22,
              complete sequence
          Length = 166560

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 553    ttgtgcaggtcancagacaccaa 575
              |||||||||||| ||||||||||
Sbjct: 137660 ttgtgcaggtcagcagacaccaa 137638
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>emb|BX279523.5| Zebrafish DNA sequence from clone CH211-63O20 in linkage group 20,
             complete sequence
          Length = 165073

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 455   aacagatctactgtagtggccaaa 478
             ||||||||||||| ||||||||||
Sbjct: 80999 aacagatctactgaagtggccaaa 80976
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>gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, complete sequence
          Length = 216104

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    aacttgctgcttttgctttg 333
              ||||||||||||||||||||
Sbjct: 131855 aacttgctgcttttgctttg 131836
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    tgaaacatttgcaaaaggaa 365
              ||||||||||||||||||||
Sbjct: 610548 tgaaacatttgcaaaaggaa 610529
to top
>emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chromosome X, complete
             sequence
          Length = 223318

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   aggaaaatcaatctcagaag 380
             ||||||||||||||||||||
Sbjct: 90935 aggaaaatcaatctcagaag 90916
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     acttaaatacaacaagattc 436
               ||||||||||||||||||||
Sbjct: 3010141 acttaaatacaacaagattc 3010160
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     taaaataaatgaaacatttg 356
               ||||||||||||||||||||
Sbjct: 1369240 taaaataaatgaaacatttg 1369221
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>emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chromosome X, complete
             sequence
          Length = 102565

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   ataaaataaatgaaacattt 355
             ||||||||||||||||||||
Sbjct: 64008 ataaaataaatgaaacattt 64027
to top
>emb|AL021811.1|ATF10M6 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M6 (ESSAII project)
          Length = 93353

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 340   aataaatgaaacatttgcaaaaggaaaa 367
             |||||||||||||| || ||||||||||
Sbjct: 26698 aataaatgaaacatgtggaaaaggaaaa 26725
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>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence
          Length = 198919

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    aggaaaatcaatctcagaag 380
              ||||||||||||||||||||
Sbjct: 142939 aggaaaatcaatctcagaag 142958
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>emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on chromosome 2, complete
              sequence
          Length = 191603

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    atgaatgaccttgatgaaat 161
              ||||||||||||||||||||
Sbjct: 159092 atgaatgaccttgatgaaat 159073
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>emb|AL844211.6| Mouse DNA sequence from clone RP23-394O8 on chromosome 4, complete
             sequence
          Length = 18325

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tacccaatttttaacagggt 24
             ||||||||||||||||||||
Sbjct: 15458 tacccaatttttaacagggt 15439
to top
>emb|AL671321.16| Mouse DNA sequence from clone RP23-274I19 on chromosome X, complete
              sequence
          Length = 234316

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    cttttgctttgggataaaat 342
              ||||||||||||||||||||
Sbjct: 175520 cttttgctttgggataaaat 175539
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>emb|AL731708.17| Mouse DNA sequence from clone RP23-103D3 on chromosome 2, complete
             sequence
          Length = 218614

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   ataaaataaatgaaacattt 355
             ||||||||||||||||||||
Sbjct: 90544 ataaaataaatgaaacattt 90563
to top
>emb|AL805911.6| Mouse DNA sequence from clone RP23-71K8 on chromosome X, complete
             sequence
          Length = 157092

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   aggaaaatcaatctcagaag 380
             ||||||||||||||||||||
Sbjct: 49081 aggaaaatcaatctcagaag 49100


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,576,257
Number of Sequences: 3902068
Number of extensions: 8576257
Number of successful extensions: 180350
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 179867
Number of HSP's gapped (non-prelim): 472
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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