ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags4f20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete cds Length = 1433 Score = 1162 bits (586), Expect = 0.0 Identities = 593/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 1 ccttgtatataaagtttctaataatacaatctttcaagtgaacgacaaaggtgtaattgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 ccttgtatataaagtttctaataatacaatctttcaagtgaacgacaaaggtgtaattgg 1240 Query: 61 tttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccacccaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 tttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccacccaa 1180 Query: 121 ctatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggccttaggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 ctatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggccttaggc 1120 Query: 181 cttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 cttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaagcc 1060 Query: 241 gtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtcagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 gtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtcagg 1000 Query: 301 cttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctgggtt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 cttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctgggtt 940 Query: 361 gatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaa 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 939 gatcaactccttcacgttctcagcaagttccagcatggtgaattca-cctgggttcccaa 881 Query: 421 tgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 tgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcag 821 Query: 481 caacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccac 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 caacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccac 761 Query: 541 gtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 gtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 707
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene) Length = 1562 Score = 500 bits (252), Expect = e-138 Identities = 379/420 (90%), Gaps = 1/420 (0%) Strand = Plus / Minus Query: 175 ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 234 ||||||||| | || ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232 Query: 235 caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 294 |||||||||||| || |||||||| |||||||| | ||||| ||||| ||||||||||| Sbjct: 1231 caagccgtcacgcagaacgaccttaggctcccaccccagaacttccttcgcctttgtgat 1172 Query: 295 gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 354 ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1171 gtctggcttcctctggcgaggatcatcaggagtgttctcggtcatcgtcactgtcacctc 1112 Query: 355 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctgggt 414 ||||||||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||| Sbjct: 1111 tgggttgatcaactctttcactttctcagcaagttccagcatggtaaattca-cctgggt 1053 Query: 415 tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 474 | || | ||||| ||||||||||||| ||||||||||||||| |||||||||| |||| Sbjct: 1052 tgcccaaattaatcggtccagtgttgtttccattcatcagcttaataagaccatcaacca 993 Query: 475 tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggctt 534 |||| || |||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 992 tatcggcgacgtagcagaagctcctagtctgtgttcctggcttctggacagtcaaggggt 933 Query: 535 caccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 ||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 932 caccacgcacagcctgagcaatgaagttgctaacaacacgcccatcatcaatgttcatcc 873 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 22 taatacaatctttcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccg 81 |||||||||||||||| |||||||||| | |||| | |||||||||||||||||||||| Sbjct: 1419 taatacaatctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccg 1360 Query: 82 taacgaaa 89 ||| |||| Sbjct: 1359 taatgaaa 1352
>gb|AY104952.1| Zea mays PCO092342 mRNA sequence Length = 1825 Score = 452 bits (228), Expect = e-124 Identities = 373/420 (88%), Gaps = 1/420 (0%) Strand = Plus / Minus Query: 175 ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 234 ||||||||||| ||||||||||| |||| ||||||||||| || |||||||||||||| Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476 Query: 235 caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 294 ||||||||| ||||||| |||||||||||| | ||||| ||||||||||| ||||| Sbjct: 1475 caagccgtccttcaggacgatcttgggctcccaccctagaacttcctttgccttggtgat 1416 Query: 295 gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 354 ||| |||||||||||||| || ||||||||||||||||| |||||||||||||| | || Sbjct: 1415 gtccggcttcctctggcggggatcatcaggagtgttctcggtcatcgtcactgttatatc 1356 Query: 355 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctgggt 414 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1355 tgggttaatcaactccttcacattctcagcaagttccagcatggtgaattcacc-tgggt 1297 Query: 415 tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 474 |||| | |||||| ||||||||||||| ||| ||||||||| | |||||||||| |||| Sbjct: 1296 tccccaagttaatcggtccagtgttgtttccgttcatcagcctaataagaccatcaacca 1237 Query: 475 tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggctt 534 |||| || || ||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 1236 tatcggcgacatagcagaagctcctagtctgtgttcctggcttctggacagtaaggggtt 1177 Query: 535 caccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 | ||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1176 cgccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatcc 1117 Score = 54.0 bits (27), Expect = 5e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaag-tgaacgacaaaggtgtaattggtttattggaactca 74 ||||||| |||||||| |||||| ||| ||| ||||| || | ||||||||||||||| Sbjct: 1684 ttctaatgatacaatccttcaaggtgatcgaagaaggtatattccgtttattggaactca 1625 Query: 75 aattccgtaacgaaa 89 |||||||||| |||| Sbjct: 1624 aattccgtaatgaaa 1610
>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1053 Score = 446 bits (225), Expect = e-122 Identities = 349/389 (89%), Gaps = 1/389 (0%) Strand = Plus / Minus Query: 206 cgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctcc 265 ||||||||||| || || ||||||||||||||||| ||||| || |||| |||||||||| Sbjct: 1022 cgctcccggaaatcatcttccatgagcaccaagccatcacgcagaacgatcttgggctcc 963 Query: 266 cagtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcagga 325 || | | ||| |||||||||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 962 caccccaaaacttcctttgcctttgtaatgtctggcttcctctgacgaggatcatcagga 903 Query: 326 gtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagca 385 |||||||||||||| || || || |||||||||||||||||||||||||| ||||||||| Sbjct: 902 gtgttctcagtcattgtgacggtaacctctgggttgatcaactccttcacattctcagca 843 Query: 386 agttccagcatggtgaattcaccctgggttcccaatgttaatgggtccagtgttgtctcc 445 ||||||||||||||||||||| |||||||| || | ||||| |||||||||||||| || Sbjct: 842 agttccagcatggtgaattca-cctgggtttcccaaattaattggtccagtgttgtcccc 784 Query: 446 attcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctg 505 ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || Sbjct: 783 gttcatcagcttaataagaccattaaccatgtcagcaacatagcagaagctcctagtttg 724 Query: 506 tgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttact 565 ||||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||| Sbjct: 723 tgttcctggcttctgaacagtcaggggctcgccacgtacggcctgagcaatgaagttact 664 Query: 566 aacaacacggccatcatcaatgttcatcc 594 ||||||||| ||||||||||||||||||| Sbjct: 663 aacaacacgcccatcatcaatgttcatcc 635
>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full insert sequence Length = 1811 Score = 446 bits (225), Expect = e-122 Identities = 373/421 (88%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 174 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 233 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483 Query: 234 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 293 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 1482 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1423 Query: 294 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 353 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1422 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 1363 Query: 354 ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctggg 413 |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 1362 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattca-cctggg 1304 Query: 414 ttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacc 473 || || | ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1303 tttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacc 1244 Query: 474 atatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggct 533 || |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1243 atgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcaggggc 1184 Query: 534 tcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatc 593 || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1183 tcgccacgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatc 1124 Query: 594 c 594 | Sbjct: 1123 c 1123 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaagtgaacgacaaaggtgta 55 ||||| ||| ||||| ||||| |||||| ||||||||||| Sbjct: 1692 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 1653
>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full insert sequence Length = 1411 Score = 446 bits (225), Expect = e-122 Identities = 373/421 (88%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 174 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 233 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094 Query: 234 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 293 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 1093 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1034 Query: 294 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 353 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1033 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 974 Query: 354 ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctggg 413 |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 973 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattca-cctggg 915 Query: 414 ttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacc 473 || || | ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 914 tttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacc 855 Query: 474 atatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggct 533 || |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 854 atgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcaggggc 795 Query: 534 tcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatc 593 || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 794 tcgccacgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatc 735 Query: 594 c 594 | Sbjct: 734 c 734 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaagtgaacgacaaaggtgta 55 ||||| ||| ||||| ||||| |||||| ||||||||||| Sbjct: 1303 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 1264
>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence Length = 958 Score = 420 bits (212), Expect = e-114 Identities = 345/388 (88%), Gaps = 1/388 (0%) Strand = Plus / Minus Query: 207 gctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctccc 266 |||||||||| || ||||||||||||||||||||||| | |||| || |||||||||| Sbjct: 787 gctcccggaaatcatcctccatgagcaccaagccgtcccccaggaagattttgggctccc 728 Query: 267 agtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggag 326 | | | ||| ||||| |||||||||| || ||||||||||| || ||||||||||||| Sbjct: 727 atcccaaaacttccttcccctttgtgatatccggcttcctctgacgggggtcatcaggag 668 Query: 327 tgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagcaa 386 ||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 667 tgttctcggtcattgtcactgtcacatctgggttgatcaactccttcacattctcagcaa 608 Query: 387 gttccagcatggtgaattcaccctgggttcccaatgttaatgggtccagtgttgtctcca 446 |||||||||||||||||||||| ||||||||| | |||||| |||||||| |||| |||| Sbjct: 607 gttccagcatggtgaattcacc-tgggttccccaagttaatcggtccagtcttgtttcca 549 Query: 447 ttcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgt 506 ||||||||||| |||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 548 ttcatcagcttaataagaccatcaaccatatcggcaacatagcagaaactcctagtctgt 489 Query: 507 gttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttacta 566 ||||||||| ||||||||||||||| ||||| || | ||||||||||||||||| ||| Sbjct: 488 gttcctggcctctggacagtcaggggctcaccgcgcacagcctgagcaatgaagttgcta 429 Query: 567 acaacacggccatcatcaatgttcatcc 594 |||||||||||||||||||||||||||| Sbjct: 428 acaacacggccatcatcaatgttcatcc 401 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ttggaactcaaattccgtaacgaaa 89 |||||||||||||||||||| |||| Sbjct: 921 ttggaactcaaattccgtaatgaaa 897
>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full insert sequence Length = 472 Score = 180 bits (91), Expect = 3e-42 Identities = 178/207 (85%) Strand = Plus / Minus Query: 174 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 233 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148 Query: 234 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 293 ||||||| ||||| || |||| | |||||||||| | | |||||||||||||||||| | Sbjct: 147 ccaagccatcacgcagaacgatcctgggctcccaccccaaaacctcctttgcctttgtaa 88 Query: 294 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 353 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 87 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 28 Query: 354 ctgggttgatcaactccttcacgttct 380 |||||||||||||||||||||| |||| Sbjct: 27 ctgggttgatcaactccttcacattct 1 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaagtgaacgacaaaggtgta 55 ||||| ||| ||||| ||||| |||||| ||||||||||| Sbjct: 357 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 318
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 174 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 233 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233 Query: 234 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 293 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 9412232 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9412173 Query: 294 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 353 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 9412172 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9412113 Query: 354 ctgggttgatcaact 368 ||||||||||||||| Sbjct: 9412112 ctgggttgatcaact 9412098 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9411539 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 9411485 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 471 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 530 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9411692 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 9411633 Query: 531 g 531 | Sbjct: 9411632 g 9411632 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcacc 408 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9412015 ctccttcacattctcagcaagttccagcatggtgaattcacc 9411974 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 469 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 9411835 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9411789 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaagtgaacgacaaaggtgta 55 ||||| ||| ||||| ||||| |||||| ||||||||||| Sbjct: 9412442 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 9412403
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 174 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 233 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633 Query: 234 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 293 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 109632 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 109573 Query: 294 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 353 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 109572 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 109513 Query: 354 ctgggttgatcaact 368 ||||||||||||||| Sbjct: 109512 ctgggttgatcaact 109498 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 108939 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 108885 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 471 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 530 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 109092 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 109033 Query: 531 g 531 | Sbjct: 109032 g 109032 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcacc 408 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 109415 ctccttcacattctcagcaagttccagcatggtgaattcacc 109374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 469 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 109235 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 109189 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaagtgaacgacaaaggtgta 55 ||||| ||| ||||| ||||| |||||| ||||||||||| Sbjct: 109842 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 109803
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 174 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 233 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354 Query: 234 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 293 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 9410353 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9410294 Query: 294 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 353 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 9410293 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9410234 Query: 354 ctgggttgatcaact 368 ||||||||||||||| Sbjct: 9410233 ctgggttgatcaact 9410219 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9409660 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 9409606 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 471 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 530 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9409813 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 9409754 Query: 531 g 531 | Sbjct: 9409753 g 9409753 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcacc 408 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9410136 ctccttcacattctcagcaagttccagcatggtgaattcacc 9410095 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 469 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 9409956 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9409910 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 16 ttctaataatacaatctttcaagtgaacgacaaaggtgta 55 ||||| ||| ||||| ||||| |||||| ||||||||||| Sbjct: 9410563 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 9410524
>gb|AY619950.1| Nicotiana tabacum UDP-glucuronate decarboxylase 1 mRNA, complete cds Length = 1279 Score = 99.6 bits (50), Expect = 1e-17 Identities = 183/226 (80%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaatgttaa 426 ||||||||| ||||| || ||||| | ||| ||||||||||| ||| || |||||||||| Sbjct: 878 ctccttcacattctccgcgagttcaatcatcgtgaattcacc-tggatttccaatgttaa 820 Query: 427 tgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgt 486 | ||||||||||| ||||| | ||| ||| ||||| |||| ||||| |||| || | Sbjct: 819 ttggtccagtgttatctccctccataagccgaataaggccatcaaccatgtcagagacat 760 Query: 487 agcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatgg 546 | || ||||| | || |||||||||||| ||||||||||| |||||| |||| || | Sbjct: 759 aacaaaagctgcgtgtttgtgttcctggcaactggacagtcaacgcttcatcacgaattg 700 Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 | || ||||||||||| || |||||||| ||||||||||| ||||| Sbjct: 699 cttgggcaatgaagttgctgacaacacgaccatcatcaatattcat 654 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 281 tttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgtt 330 ||||||||||||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 964 tttgcctttgtgatgtccggttttctctgccgaggatcatctggagtgtt 915
>gb|AY922315.1| Populus tomentosa UDP-glucuronic acid decarboxylase 3 (UXS3) mRNA, complete cds Length = 1129 Score = 83.8 bits (42), Expect = 6e-13 Identities = 181/226 (80%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaatgttaa 426 ||||||||| |||||||||| || |||||| ||||| ||||||||| |||||||| | Sbjct: 893 ctccttcactgtctcagcaagctcggtcatggtaaattc-ccctgggtttccaatgttga 835 Query: 427 tgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgt 486 | ||||||||||| ||||| | ||| || ||||| |||| ||||| |||| |||| Sbjct: 834 ttggtccagtgttctctccttccatgaggcgaataaggccatcaaccatgtcagagacgt 775 Query: 487 agcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatgg 546 ||||||| || | ||| || ||||| ||||| || || |||| | ||||||||| | | Sbjct: 774 agcagaaactgcgagtttgagttccaggcttttgaactgtcaatggttcaccacgaagtg 715 Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 | |||||||||||||| || |||||||| ||||||||||| ||||| Sbjct: 714 cttgagcaatgaagttgctcacaacacgcccatcatcaatattcat 669 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 279 cctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctc 333 ||||||||||||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 981 cctttgcctttgtaatgtcaggtttcctctgtcgtggatcatcaggagtattctc 927
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence Length = 1281 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 500 agtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaa 559 ||||||||| ||||| ||||| ||||||| || |||||||| | || ||||||||||| Sbjct: 772 agtctgtgtccctggtttctgaacagtcaatgcctcaccacggagtgcttgagcaatgaa 713 Query: 560 gttactaacaacacggccatcatcaatgttcat 592 ||| || |||||||| ||||||||||||||||| Sbjct: 712 gttgcttacaacacgtccatcatcaatgttcat 680 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 987 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 937
>gb|U82433.1|PAU82433 Prunus armeniaca thymidine diphospho-glucose 4-6-dehydratase homolog mRNA, partial cds Length = 1012 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 278 tcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 ||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 702 tccttcgcttttgtgatgtcaggcttcctctggcgaggatcatccggcgtgttctca 646 Score = 54.0 bits (27), Expect = 5e-04 Identities = 67/79 (84%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaatgttaa 426 ||||||||| ||||| ||||| || | ||| || |||||||| ||| || |||||||| | Sbjct: 613 ctccttcacattctcggcaagctcgatcattgtaaattcacc-tggatttccaatgttga 555 Query: 427 tgggtccagtgttgtctcc 445 | ||||||||||||||||| Sbjct: 554 tcggtccagtgttgtctcc 536 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 555 atgaagttactaacaacacggccatcatcaatgttcat 592 ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 426 atgaaattactgacaacacgaccatcatcaatattcat 389
>emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4-6-dehydratase Length = 1356 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 486 tagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatg 545 |||||||| || | ||| ||||||||||| |||||||||| || ||||||||| | Sbjct: 795 tagcagaaactgcgagtttgtgttcctggagattggacagtcaaggattcaccacgcagt 736 Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 || |||||||||||||| || |||||||| ||||||||||| ||||| Sbjct: 735 gcttgagcaatgaagttgctgacaacacgtccatcatcaatattcat 689 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcacc 408 ||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 913 ctccttcactgtctcagcaagttcaagcattgtgaattcacc 872
>ref|NM_128436.3| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.1 mRNA, complete cds Length = 1394 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 797 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 738 Query: 564 ctaacaacacggccatcatcaatgttcat 592 || ||||| || ||||||||||||||||| Sbjct: 737 ctcacaacgcgaccatcatcaatgttcat 709
>ref|NM_201826.1| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.2 mRNA, complete cds Length = 1389 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 792 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 733 Query: 564 ctaacaacacggccatcatcaatgttcat 592 || ||||| || ||||||||||||||||| Sbjct: 732 ctcacaacgcgaccatcatcaatgttcat 704
>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.1 mRNA, complete cds Length = 1374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 500 agtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaa 559 ||||||||| ||||| ||||| ||||||| || ||||| || | || || |||||||| Sbjct: 836 agtctgtgtccctggtttctgaacagtcaatgcctcaccccggagtgcttgtgcaatgaa 777 Query: 560 gttactaacaacacggccatcatcaatgttcat 592 ||| || ||||||||||||||||| |||||||| Sbjct: 776 gttgcttacaacacggccatcatcgatgttcat 744 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.2 mRNA, complete cds Length = 1464 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 500 agtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaa 559 ||||||||| ||||| ||||| ||||||| || ||||| || | || || |||||||| Sbjct: 926 agtctgtgtccctggtttctgaacagtcaatgcctcaccccggagtgcttgtgcaatgaa 867 Query: 560 gttactaacaacacggccatcatcaatgttcat 592 ||| || ||||||||||||||||| |||||||| Sbjct: 866 gttgcttacaacacggccatcatcgatgttcat 834 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1141 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1091
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases (At3g46440) mRNA, complete cds Length = 1057 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 500 agtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaa 559 ||||||||| ||||| ||||| ||||||| || ||||| || | || || |||||||| Sbjct: 711 agtctgtgtccctggtttctgaacagtcaatgcctcaccccggagtgcttgtgcaatgaa 652 Query: 560 gttactaacaacacggccatcatcaatgttcat 592 ||| || ||||||||||||||||| |||||||| Sbjct: 651 gttgcttacaacacggccatcatcgatgttcat 619 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 926 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 876
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase (At3g46440) mRNA, complete cds Length = 1356 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 500 agtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaa 559 ||||||||| ||||| ||||| ||||||| || ||||| || | || || |||||||| Sbjct: 836 agtctgtgtccctggtttctgaacagtcaatgcctcaccccggagtgcttgtgcaatgaa 777 Query: 560 gttactaacaacacggccatcatcaatgttcat 592 ||| || ||||||||||||||||| |||||||| Sbjct: 776 gttgcttacaacacggccatcatcgatgttcat 744 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
>gb|AY128899.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1234 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 713 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 654 Query: 564 ctaacaacacggccatcatcaatgttcat 592 || ||||| || ||||||||||||||||| Sbjct: 653 ctcacaacgcgaccatcatcaatgttcat 625
>gb|AY099703.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1393 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 797 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 738 Query: 564 ctaacaacacggccatcatcaatgttcat 592 || ||||| || ||||||||||||||||| Sbjct: 737 ctcacaacgcgaccatcatcaatgttcat 709
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 ||||||||||||||||| || ||||| || ||||||||||||||||| Sbjct: 8484 gcctgagcaatgaagttgctcacaacgcgaccatcatcaatgttcat 8530
>gb|AY429442.1| Gossypium barbadense fiber dTDP-glucose 4-6-dehydratase mRNA, partial cds Length = 872 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 ||||||||||| || || |||||||| ||||||||||||||||||| Sbjct: 180 tgagcaatgaaattgcttacaacacgcccatcatcaatgttcatcc 135
>gb|AY106346.1| Zea mays PCO069392 mRNA sequence Length = 1708 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||||||| |||||||||||||| |||||| Sbjct: 1005 gcctgagcaacgaagttactgacaacacggccatcgtcaatg 964
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 552 gcaatgaagttactaacaacacggccatcatcaatgttcat 592 ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 76086 gcaatgaagttgcttacaacacggccatcatcgatgttcat 76126 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 75554 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 75604
>emb|BX818916.1|CNS0A9UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | |||||||||||||||| Sbjct: 776 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagtgg 717 Query: 564 ctaacaacacggccatcatcaatgttcat 592 || ||||| || ||||||||||||||||| Sbjct: 716 ctcacaacgcgaccatcatcaatgttcat 688
>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1211 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 552 gcaatgaagttactaacaacacggccatcatcaatgttcat 592 ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 683 gcaatgaagttgcttacaacacggccatcatcgatgttcat 643 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 950 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 900
>ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE); catalytic AT5G59290 (UXS3) mRNA, complete cds Length = 1459 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 811 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 768
>gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 665 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 622
>gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1364 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 755 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 712
>emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 737 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 694
>gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete sequence Length = 1418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 811 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 768
>gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS3) mRNA, complete cds Length = 1029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 665 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 622
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 55725 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcat 55768
>gb|AY963839.1| Cucumis sativus putative nucleotide sugar epimerase mRNA, partial cds Length = 416 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||| |||||| ||||||||||| || |||||||| ||||| Sbjct: 384 gcctgagcaaggaagttgctaacaacacgaccgtcatcaatattcat 338
>dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate carboxy-lyase, complete cds Length = 1406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 367 ctccttcacgttctcagcaagttccagcatggtgaattcaccc 409 ||||||||| ||||||||||||| ||||| |||||||||||| Sbjct: 973 ctccttcactgtctcagcaagttcaagcatagtgaattcaccc 931 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcat 592 |||||||||||||| || |||||||| |||||||| || ||||| Sbjct: 792 tgagcaatgaagttgctgacaacacgtccatcatcgatattcat 749
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2); catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2) mRNA, complete cds Length = 1338 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatc 895 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>gb|AY922314.1| Populus tomentosa UDP-glucuronic acid decarboxylase 2 (UXS2) mRNA, complete cds Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 |||||||||| || ||||||||||||||||||||||| Sbjct: 1038 gcctgagcaacaaaattactaacaacacggccatcatc 1001
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds Length = 1338 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatc 895 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||| || ||||||||||||||||||||| Sbjct: 339 gcctgagcaacaaagttgctgacaacacggccatcatcaatg 298
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1663 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 1085 gcctgtgcaacgaagttactaacaacacgcccatcatc 1048 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA, partial cds Length = 773 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||| || ||||||||||||||||||||| Sbjct: 334 gcctgagcaacaaagttgctgacaacacggccatcatcaatg 293
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1701 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 1085 gcctgtgcaacgaagttactaacaacacgcccatcatc 1048 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
>emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 923 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 303 gcctgtgcaacgaagttactaacaacacgcccatcatc 266 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 564 gcctttgtgatgtcaggctttctcttgtgagggtc 530
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA, complete cds Length = 1338 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatc 895 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1336 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||| || ||||||||||||||||||||| Sbjct: 937 gcctgagcaacaaagttgctgacaacacggccatcatcaatg 896
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases Length = 1660 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 ||||| |||| |||||||||||||||||| |||||||| Sbjct: 1071 gcctgtgcaacgaagttactaacaacacgcccatcatc 1034 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 1332 gcctttgtgatgtcaggctttctcttgtgagggtc 1298
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full insert sequence Length = 1820 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||| || ||||||||||||||||||||| Sbjct: 1064 gcctgagcaacaaagttgctgacaacacggccatcatcaatg 1023
>gb|AY105704.1| Zea mays PCO089743 mRNA sequence Length = 888 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 225 gcctgagcaacgaaattactgacaacacggccgtcatcaatg 184
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence Length = 108802 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatc 583 ||||||||| |||||||||||| ||||| |||||||| Sbjct: 42476 cctgagcaacgaagttactaacgacacgtccatcatc 42512 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 383 gcaagttccagcatggtgaattcacc 408 ||||||||||||||||| |||||||| Sbjct: 40939 gcaagttccagcatggtaaattcacc 40964
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 547 cctgagcaatgaagttactaacaacacggccatcatc 583 |||| |||| |||||||||||||||||| |||||||| Sbjct: 87133 cctgtgcaacgaagttactaacaacacgcccatcatc 87097 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 88182 gcctttgtgatgtcaggctttctcttgtgagggtc 88148
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatg 587 ||||||||| ||||| || ||||||||||||||||||||| Sbjct: 11891009 cctgagcaacaaagttgctgacaacacggccatcatcaatg 11891049
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatg 587 ||||||||| ||||| || ||||||||||||||||||||| Sbjct: 103294 cctgagcaacaaagttgctgacaacacggccatcatcaatg 103334
>ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); catalytic AT3G53520 (UXS1) transcript variant AT3G53520.2 mRNA, complete cds Length = 1531 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 896 aagttactaacaacacgcccatcatcaa 869
>ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); catalytic AT3G53520 (UXS1) transcript variant AT3G53520.1 mRNA, complete cds Length = 1529 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 896 aagttactaacaacacgcccatcatcaa 869
>gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein (F4P12.220) mRNA, complete cds Length = 1666 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 1030 aagttactaacaacacgcccatcatcaa 1003
>emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1608 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 1020 aagttactaacaacacgcccatcatcaa 993
>emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1648 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 1074 aagttactaacaacacgcccatcatcaa 1047
>emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1604 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 1017 aagttactaacaacacgcccatcatcaa 990
>gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein (At3g53520) mRNA, complete cds Length = 1492 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 923 aagttactaacaacacgcccatcatcaa 896
>gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS1) mRNA, complete cds Length = 1302 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 923 aagttactaacaacacgcccatcatcaa 896
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaa 585 ||||||||||||||||| |||||||||| Sbjct: 83848 aagttactaacaacacgcccatcatcaa 83821
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 966 gcctttgtgatgtcaggctttctcttgtgagggtc 1000
>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 334 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 876 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 826 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gcaatgaagttactaacaacacggccatcatc 583 ||||||||||| || |||||| |||||||||| Sbjct: 609 gcaatgaagttgcttacaacaaggccatcatc 578
>emb|BX822583.1|CNS0A63N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB50ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtc 318 |||||||||||||||||||| |||| | ||||||| Sbjct: 92 gcctttgtgatgtcaggctttctcttgtgagggtc 58
>gb|AY619952.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 3 mRNA, complete cds Length = 1756 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 545 ggcctgagcaatgaagttactaacaacacggccatcatc 583 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1097 ggcctgagcaacaaagttgctaacaacacgaccatcatc 1059
>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA, complete cds Length = 1380 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||| || |||||||||||||| |||||| Sbjct: 815 gcctgagcaacaaagttgctgacaacacggccatcgtcaatg 774
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1555 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 |||||||||| ||||| || ||||||||||||||||| Sbjct: 1033 gcctgagcaacaaagttgctgacaacacggccatcatc 996
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full insert sequence Length = 1734 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatc 583 |||||||||| ||||| || ||||||||||||||||| Sbjct: 1107 gcctgagcaacaaagttgctgacaacacggccatcatc 1070
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatc 321 |||||||| ||||||||||| |||| | |||||||||| Sbjct: 19871 gcctttgtaatgtcaggctttctcttgtgagggtcatc 19834 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaat 586 |||| |||| |||||| || |||||||| ||||||||||| Sbjct: 18942 cctgcgcaacgaagttgctgacaacacgtccatcatcaat 18903
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttcctctggcgagggtcatc 321 |||||||| ||||||||||| |||| | |||||||||| Sbjct: 106049 gcctttgtaatgtcaggctttctcttgtgagggtcatc 106012 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaat 586 |||| |||| |||||| || |||||||| ||||||||||| Sbjct: 105120 cctgcgcaacgaagttgctgacaacacgtccatcatcaat 105081
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatc 583 ||||||||| ||||| || ||||||||||||||||| Sbjct: 144435 cctgagcaacaaagttgctgacaacacggccatcatc 144471
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gcctttgtgatgtcaggcttc 304 ||||||||||||||||||||| Sbjct: 163613 gcctttgtgatgtcaggcttc 163593
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatc 583 ||||||||| ||||| || ||||||||||||||||| Sbjct: 17200300 cctgagcaacaaagttgctgacaacacggccatcatc 17200336
>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence Length = 35325 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aaagtttctaataatacaat 30 |||||||||||||||||||| Sbjct: 20319 aaagtttctaataatacaat 20300
>gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome 8, complete sequence Length = 180801 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gatcaactccttcacgttct 380 |||||||||||||||||||| Sbjct: 157934 gatcaactccttcacgttct 157915
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aaagtttctaataatacaat 30 |||||||||||||||||||| Sbjct: 103537 aaagtttctaataatacaat 103518
>emb|AL136135.19| Human DNA sequence from clone RP11-301C18 on chromosome 6 Contains the 5'end of a gene for a novel protein (2410004N11RIK), the gene for a novel protein, the 5' end of a gene for a novel protein and a CpG island, complete sequence Length = 46699 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 tggcttctggacagtcagggcttc 535 ||||||||||| |||||||||||| Sbjct: 13241 tggcttctggagagtcagggcttc 13218
>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18, complete sequence Length = 149493 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 taaagtttctaataatacaa 29 |||||||||||||||||||| Sbjct: 107638 taaagtttctaataatacaa 107657
>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence Length = 167258 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 agcttcataagaccattgac 472 |||||||||||||||||||| Sbjct: 166392 agcttcataagaccattgac 166411
>gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complete sequence Length = 195101 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tatataaagtttctaataat 25 |||||||||||||||||||| Sbjct: 13115 tatataaagtttctaataat 13096
>gb|AC091643.6| Homo sapiens chromosome 18, clone RP11-727B4, complete sequence Length = 169944 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 agcttcataagaccattgac 472 |||||||||||||||||||| Sbjct: 68254 agcttcataagaccattgac 68273
>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207228 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gacaaaggtgtaattggttt 63 |||||||||||||||||||| Sbjct: 337 gacaaaggtgtaattggttt 318
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence Length = 193884 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ttggccttcttgggcactgc 201 |||||||||||||||||||| Sbjct: 153079 ttggccttcttgggcactgc 153098
>gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 135177 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gacaaaggtgtaattggttt 63 |||||||||||||||||||| Sbjct: 76946 gacaaaggtgtaattggttt 76927
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 ggacagtcagggcttcacca 539 |||||||||||||||||||| Sbjct: 163567 ggacagtcagggcttcacca 163548
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 548 ctgagcaatgaagttactaacaacacggccatcatc 583 |||||| | |||||| ||||||||||| |||||||| Sbjct: 883 ctgagcgacgaagttgctaacaacacgcccatcatc 848
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full insert sequence Length = 1604 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 548 ctgagcaatgaagttactaacaacacggccatcatc 583 |||||| | |||||| ||||||||||| |||||||| Sbjct: 978 ctgagcgacgaagttgctaacaacacgcccatcatc 943
>emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 in linkage group 18, complete sequence Length = 176163 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 taaagtttctaataatacaa 29 |||||||||||||||||||| Sbjct: 165685 taaagtttctaataatacaa 165666
>gb|AY108129.1| Zea mays PCO069672 mRNA sequence Length = 984 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ttgggctcccagtcaagaac 276 |||||||||||||||||||| Sbjct: 623 ttgggctcccagtcaagaac 604
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tatgagtatgctctggcaaa 141 |||||||||||||||||||| Sbjct: 208325 tatgagtatgctctggcaaa 208306
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 agttccagcatggtgaattc 405 |||||||||||||||||||| Sbjct: 372396 agttccagcatggtgaattc 372377
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete sequence Length = 159617 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttggccttcttgggcactgc 201 |||||||||||||||||||| Sbjct: 53068 ttggccttcttgggcactgc 53049
>gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, complete cds Length = 3574 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gtctccattcatcagcttca 459 |||||||||||||||||||| Sbjct: 3434 gtctccattcatcagcttca 3415 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,761,107 Number of Sequences: 3902068 Number of extensions: 4761107 Number of successful extensions: 105381 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105035 Number of HSP's gapped (non-prelim): 336 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
