| Clone Name | rbags4f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1647 Score = 446 bits (225), Expect = e-122 Identities = 330/365 (90%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 1311 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 1252 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1251 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 1192 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | || || |||||||| ||||| || ||||||||||| || |||||||||||||||||| Sbjct: 1191 aacagttctttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaat 1132 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 |||||||||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| Sbjct: 1131 ccaattgccttggcagctcggcttcccaaaggacctgcagatatggtgttaactctgatt 1072 Query: 522 ttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgcttta 581 || ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1071 ttccctttccttccagcttcaaaagcaagtacttttgtgtcactctcaagagctgcttta 1012 Query: 582 gctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaatatatgttagc 641 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| Sbjct: 1011 gctgaactcatgccaccaccatatccaggaattgccctttcagatgcaatgtatgttaga 952 Query: 642 gagat 646 ||||| Sbjct: 951 gagat 947 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tactaactaactaagctctttattcaa 212 ||||| ||||||||||||||||||||| Sbjct: 1404 tactacctaactaagctctttattcaa 1378
>dbj|AK070992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077K10, full insert sequence Length = 1647 Score = 446 bits (225), Expect = e-122 Identities = 330/365 (90%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 1311 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 1252 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1251 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 1192 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | || || |||||||| ||||| || ||||||||||| || |||||||||||||||||| Sbjct: 1191 aacagttctttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaat 1132 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 |||||||||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| Sbjct: 1131 ccaattgccttggcagctcggcttcccaaaggacctgcagatatggtgttaactctgatt 1072 Query: 522 ttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgcttta 581 || ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1071 ttccctttccttccagcttcaaaagcaagtacttttgtgtcactctcaagagctgcttta 1012 Query: 582 gctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaatatatgttagc 641 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| Sbjct: 1011 gctgaactcatgccaccaccatatccaggaattgccctttcagatgcaatgtatgttaga 952 Query: 642 gagat 646 ||||| Sbjct: 951 gagat 947 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tactaactaactaagctctttattcaa 212 ||||| ||||||||||||||||||||| Sbjct: 1404 tactacctaactaagctctttattcaa 1378
>gb|BT016571.1| Zea mays clone Contig404 mRNA sequence Length = 1517 Score = 319 bits (161), Expect = 6e-84 Identities = 314/365 (86%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 |||||||||| |||||| ||||| || || || |||||||| || |||||||||||||| Sbjct: 1178 gggctgtcaattgcaagccccattgtattgagcccattgtcaacataaacagtcgagccg 1119 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||||||||||||||| | ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct: 1118 gtgatggcagaagccaatgaagaaaccaggaatgcagctgtgttccccacctcatcagcc 1059 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | |||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1058 aacagctccttctgcaatggtgcattaacatatgagtactctatcatcttctcaataaat 999 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 ||||||||||| || |||| ||| || ||||| ||||| ||||||||||| |||| |||| Sbjct: 998 ccaattgccttagcagctcggctcccaagagggcctgctgatatggtgttaactctgatt 939 Query: 522 ttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgcttta 581 |||||||| || |||||||| || ||||| || ||||||||||||||||||||||||| Sbjct: 938 ttgccttttcgcccagcttcgaatgcaagcacccgtgtatcactctcaagagctgcttta 879 Query: 582 gctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaatatatgttagc 641 || |||||||| ||||| ||||| |||||||| | ||||||||||||||| |||||||| Sbjct: 878 gcagaactcatcccaccaccatacccaggaatcgccctttcagatgcaatgtatgttaga 819 Query: 642 gagat 646 ||||| Sbjct: 818 gagat 814
>gb|AY106087.1| Zea mays PCO109463 mRNA sequence Length = 1496 Score = 299 bits (151), Expect = 6e-78 Identities = 298/347 (85%) Strand = Plus / Minus Query: 279 gtggggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgag 338 ||||||||||||| |||||| ||||| ||||| || |||||||| ||||||| ||| || Sbjct: 1223 gtggggctgtcaagtgcaagtcccattgtgttgagcccattgtcaacgtaaatagttgaa 1164 Query: 339 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 398 |||||||| || || ||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 1163 ccagtgattgctgatgccaaaggagacaccaggaatgctgccgtgttccccacttcatct 1104 Query: 399 gccagaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatg 458 |||| | ||||| |||| |||||| || |||||||| ||||| ||||||||||| || Sbjct: 1103 gccaataattccttttgcagtggtgcattaacataagaatactctatcatcttctcgata 1044 Query: 459 aatccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcgg 518 |||||||| || || || |||| |||||||| |||||||| |||||||||||||||| | Sbjct: 1043 aatccaatggcttttgctgctcggcttcccaatggacctgctgatatggtgttcactctg 984 Query: 519 attttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgct 578 ||||||||||| || || |||||| | ||||| ||| ||||||||||||||||||||||| Sbjct: 983 attttgccttttcgacctgcttcatatgcaagaactcttgtatcactctcaagagctgct 924 Query: 579 ttagctgaactcatgccaccgccatatccaggaattgtcctttcaga 625 || ||||||||||| ||||| || || ||||||||| |||||||||| Sbjct: 923 tttgctgaactcataccaccaccgtagccaggaattatcctttcaga 877
>gb|DQ083199.1| Oryza sativa (indica cultivar-group) clone 5S11F12 mRNA sequence Length = 443 Score = 297 bits (150), Expect = 2e-77 Identities = 240/270 (88%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 270 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 211 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 210 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 151 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | || || |||||||| ||||| || ||||||||||| || |||||||||||||||||| Sbjct: 150 aacagttctttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaat 91 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 |||||||||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| Sbjct: 90 ccaattgccttggcagctcggcttcccaaaggacctgcagatatggtgttaactctgatt 31 Query: 522 ttgcctttgcgtccagcttcaaaagcaagt 551 || ||||| | ||||||||||||||||||| Sbjct: 30 ttccctttccttccagcttcaaaagcaagt 1 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tactaactaactaagctctttattcaa 212 ||||| ||||||||||||||||||||| Sbjct: 363 tactacctaactaagctctttattcaa 337
>gb|AY112451.1| Zea mays CL3046_1 mRNA sequence Length = 1482 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 |||||||||| |||||| ||||| || || || |||||||| || |||||||||||||| Sbjct: 1174 gggctgtcaattgcaagccccattgtattgagcccattgtcaacataaacagtcgagccg 1115 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||||||||||||||| | ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct: 1114 gtgatggcagaagccaatgaagaaaccaggaatgcagctgtgttccccacctcatcagcc 1055 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | |||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1054 aacagctccttctgcaatggtgcattaacatatgagtactctatcatcttctcaataaat 995 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 ||||||||||| || |||| ||| || ||||| ||||| ||||||||||| |||| |||| Sbjct: 994 ccaattgccttagcagctcggctcccaagagggcctgctgatatggtgttaactctgatt 935 Query: 522 ttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgcttta 581 |||||||| || |||||||| || ||||| || ||||||||||||||||||||||||| Sbjct: 934 ttgccttttcgcccagcttcgaatgcaagcacccgtgtatcactctcaagagctgcttta 875 Query: 582 gc 583 || Sbjct: 874 gc 873 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 606 ccaggaattgtcctttcagatgcaatatatgttagcgagat 646 |||||||| | ||||||||||||||| |||||||| ||||| Sbjct: 850 ccaggaatcgccctttcagatgcaatgtatgttagagagat 810
>emb|AJ003025.1|OSENOYLAC Oryza sativa mRNA for enoyl-ACP reductase Length = 1520 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Minus Query: 477 gctctgcttcccagaggacctgcagatatggtgttcactcggattttgcctttgcgtcca 536 |||| |||||||| ||||||||||||||||||||| |||| |||||| ||||| | |||| Sbjct: 929 gctcggcttcccaaaggacctgcagatatggtgttaactctgattttccctttccttcca 870 Query: 537 gcttcaaaagcaagtacttttgtatcactctcaagagctgctttagctgaactcatgcca 596 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 869 gcttcaaaagcaagtacttttgtgtcactctcaagagctgctttagctgaactcatgcca 810 Query: 597 ccgccatatccaggaattgtcctttcagatgcaatatatgttagcgagat 646 || |||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 809 ccaccatatccaggaattgccctttcagatgcaatgtatgttagagagat 760 Score = 198 bits (100), Expect = 2e-47 Identities = 190/220 (86%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || |||||||||| ||||| |||||||||||| Sbjct: 1148 gggctgtcaactgcaagccccattgtattgagtccattgtgaacgtacacagtcgagcca 1089 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1088 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 1029 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | || || ||||| || ||||| | ||||||||||| || || ||||||||||||||| Sbjct: 1028 aacagttctttctgaaacggtgcataaacataagagtattctatgatcttctcaatgaat 969 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcag 501 |||||||||||||| |||| |||||||| ||||||||||| Sbjct: 968 ccaattgccttggcagctcggcttcccaaaggacctgcag 929
>ref|XM_450461.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1652 Score = 208 bits (105), Expect = 2e-50 Identities = 282/341 (82%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 |||||||||| |||||| ||||| || || || |||||||| || || | ||| || ||| Sbjct: 1227 gggctgtcaagtgcaagtcccattgtattgagcccattgtcaacatagatagttgatcca 1168 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||| ||||| ||||| || || | | |||||||| || ||||| |||||||||||| Sbjct: 1167 gtgattgcagatgccaacggcgatgctaagaatgctgctgtgttccccacttcatctgcc 1108 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| Sbjct: 1107 aagagctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaa 1048 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 ||||| || ||||| |||| ||||||| |||||||| |||||||| ||||||| ||| Sbjct: 1047 ccaatagctttggctgctcgacttcccaatggacctgctgatatggtattcactctgatc 988 Query: 522 ttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgcttta 581 |||||||| || || ||||| |||| || ||| |||||||||||||||| |||||||| Sbjct: 987 ttgccttttcgacctgcttcgtaagctagaactcttgtatcactctcaagtgctgctttt 928 Query: 582 gctgaactcatgccaccgccatatccaggaattgtcctttc 622 ||||| |||||||| || || |||||||||||||||||||| Sbjct: 927 gctgagctcatgccgccaccgtatccaggaattgtcctttc 887
>dbj|AK103141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G12, full insert sequence Length = 1652 Score = 208 bits (105), Expect = 2e-50 Identities = 282/341 (82%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 |||||||||| |||||| ||||| || || || |||||||| || || | ||| || ||| Sbjct: 1227 gggctgtcaagtgcaagtcccattgtattgagcccattgtcaacatagatagttgatcca 1168 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 401 ||||| ||||| ||||| || || | | |||||||| || ||||| |||||||||||| Sbjct: 1167 gtgattgcagatgccaacggcgatgctaagaatgctgctgtgttccccacttcatctgcc 1108 Query: 402 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 461 | ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| Sbjct: 1107 aagagctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaa 1048 Query: 462 ccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcactcggatt 521 ||||| || ||||| |||| ||||||| |||||||| |||||||| ||||||| ||| Sbjct: 1047 ccaatagctttggctgctcgacttcccaatggacctgctgatatggtattcactctgatc 988 Query: 522 ttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagctgcttta 581 |||||||| || || ||||| |||| || ||| |||||||||||||||| |||||||| Sbjct: 987 ttgccttttcgacctgcttcgtaagctagaactcttgtatcactctcaagtgctgctttt 928 Query: 582 gctgaactcatgccaccgccatatccaggaattgtcctttc 622 ||||| |||||||| || || |||||||||||||||||||| Sbjct: 927 gctgagctcatgccgccaccgtatccaggaattgtcctttc 887
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 14411413 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 14411354 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctg 399 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 14411353 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctg 14411296 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 411 ttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatccaattgcc 470 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 14411178 ttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaatccaattgcc 14411119 Query: 471 ttggcggctctgcttcccagaggacct 497 ||||| |||| |||||||| ||||||| Sbjct: 14411118 ttggcagctcggcttcccaaaggacct 14411092 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 551 tacttttgtatcactctcaagagctgctttagctgaactcatgccaccgccatatc 606 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14410604 tacttttgtgtcactctcaagagctgctttagctgaactcatgccaccaccatatc 14410549 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 494 acctgcagatatggtgttcactcggattttgcctttgcgtccagcttcaaaagcaagtac 553 |||||||||||||||||| |||| |||||| ||||| | ||||||||||||||||||||| Sbjct: 14410826 acctgcagatatggtgttaactctgattttccctttccttccagcttcaaaagcaagtac 14410767 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 606 ccaggaattgtcctttcagatgcaatatatgttagcgagat 646 |||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 14410465 ccaggaattgccctttcagatgcaatgtatgttagagagat 14410425 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tactaactaactaagctctttattcaa 212 ||||| ||||||||||||||||||||| Sbjct: 14411506 tactacctaactaagctctttattcaa 14411480
>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01 Length = 140261 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 6281 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 6222 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctg 399 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 6221 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctg 6164 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 411 ttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatccaattgcc 470 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 6046 ttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaatccaattgcc 5987 Query: 471 ttggcggctctgcttcccagaggacct 497 ||||| |||| |||||||| ||||||| Sbjct: 5986 ttggcagctcggcttcccaaaggacct 5960 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 551 tacttttgtatcactctcaagagctgctttagctgaactcatgccaccgccatatc 606 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5472 tacttttgtgtcactctcaagagctgctttagctgaactcatgccaccaccatatc 5417 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 494 acctgcagatatggtgttcactcggattttgcctttgcgtccagcttcaaaagcaagtac 553 |||||||||||||||||| |||| |||||| ||||| | ||||||||||||||||||||| Sbjct: 5694 acctgcagatatggtgttaactctgattttccctttccttccagcttcaaaagcaagtac 5635 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 606 ccaggaattgtcctttcagatgcaatatatgttagcgagat 646 |||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 5333 ccaggaattgccctttcagatgcaatgtatgttagagagat 5293 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tactaactaactaagctctttattcaa 212 ||||| ||||||||||||||||||||| Sbjct: 6374 tactacctaactaagctctttattcaa 6348
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 282 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 341 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 55696 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 55637 Query: 342 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctg 399 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 55636 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctg 55579 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 411 ttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatccaattgcc 470 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 55461 ttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaatccaattgcc 55402 Query: 471 ttggcggctctgcttcccagaggacct 497 ||||| |||| |||||||| ||||||| Sbjct: 55401 ttggcagctcggcttcccaaaggacct 55375 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 551 tacttttgtatcactctcaagagctgctttagctgaactcatgccaccgccatatc 606 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 54887 tacttttgtgtcactctcaagagctgctttagctgaactcatgccaccaccatatc 54832 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 494 acctgcagatatggtgttcactcggattttgcctttgcgtccagcttcaaaagcaagtac 553 |||||||||||||||||| |||| |||||| ||||| | ||||||||||||||||||||| Sbjct: 55109 acctgcagatatggtgttaactctgattttccctttccttccagcttcaaaagcaagtac 55050 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 606 ccaggaattgtcctttcagatgcaatatatgttagcgagat 646 |||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 54748 ccaggaattgccctttcagatgcaatgtatgttagagagat 54708 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tactaactaactaagctctttattcaa 212 ||||| ||||||||||||||||||||| Sbjct: 55789 tactacctaactaagctctttattcaa 55763
>gb|AY083164.1| Olea europaea subsp. europaea enoyl ACP reductase (ear) mRNA, complete cds Length = 1674 Score = 113 bits (57), Expect = 7e-22 Identities = 126/149 (84%) Strand = Plus / Minus Query: 492 ggacctgcagatatggtgttcactcggattttgcctttgcgtccagcttcaaaagcaagt 551 |||||||||||||||||||| |||| ||||||| ||| | ||||||||||||||| || Sbjct: 1144 ggacctgcagatatggtgttgactctgattttgtgttttcttccagcttcaaaagccaga 1085 Query: 552 acttttgtatcactctcaagagctgctttagctgaactcatgccaccgccatatccagga 611 || | ||| |||||||| ||||| || || || ||||||||||| || |||||||| || Sbjct: 1084 acctgtgtgtcactctctagagcagcctttgcagaactcatgccgcctccatatccgggt 1025 Query: 612 attgtcctttcagatgcaatatatgttag 640 || |||| |||||||||||||||||||| Sbjct: 1024 ataatcctctcagatgcaatatatgttag 996
>emb|AJ243087.1|BNA243087 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform 1A, (enrA1 gene) Length = 1349 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 456 atgaatccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcact 515 ||||| |||||||| || || |||| |||||||| |||||||||||| |||||||| || Sbjct: 1020 atgaagccaattgctttcgctgctcggcttcccaaaggacctgcagagatggtgttgacc 961 Query: 516 cggattttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagct 575 | ||||| ||| | |||||||||||| ||||| || |||||||||||| || || Sbjct: 960 ctaattttttgtttccttccagcttcaaatgcaagcacccgtgtatcactctctagtgcg 901 Query: 576 gctttagctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaat 631 ||||| || |||||||| || || ||||| |||||||| |||||||||| ||||| Sbjct: 900 gctttggcagaactcatacccccaccatacccaggaatgatcctttcagaagcaat 845 Score = 40.1 bits (20), Expect = 8.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 345 atggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgc 400 |||||||| ||||| ||||| |||| || ||||| | |||||| ||||||||||| Sbjct: 1131 atggcagaggccaatggagataccaagaaggctgctgcattcccaacttcatctgc 1076
>emb|X95462.1|BNENOYLRD B.napus mRNA for enoyl reductase Length = 1351 Score = 79.8 bits (40), Expect = 1e-11 Identities = 142/176 (80%) Strand = Plus / Minus Query: 456 atgaatccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcact 515 ||||| |||||||| || || |||| |||||||| |||||||||||| |||||||| || Sbjct: 1018 atgaagccaattgctttcgctgctcggcttcccaaaggacctgcagagatggtgttgacc 959 Query: 516 cggattttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagct 575 | ||||| ||| | |||||||||||| |||| || |||||||||||| || || Sbjct: 958 ctaattttttgtttccttccagcttcaaatacaagcacccgtgtatcactctctagtgcg 899 Query: 576 gctttagctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaat 631 ||||| || |||||||| || || ||||| |||||||| |||||||||| ||||| Sbjct: 898 gctttggcagaactcatacccccaccatacccaggaatgatcctttcagaagcaat 843 Score = 40.1 bits (20), Expect = 8.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 345 atggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgc 400 |||||||| ||||| ||||| |||| || ||||| | |||||| ||||||||||| Sbjct: 1129 atggcagaggccaatggagataccaagaaggctgctgcattcccaacttcatctgc 1074
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 405 agctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatcca 464 ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 5731119 agctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaacca 5731060 Query: 465 attgccttggcggctctgcttcccagaggacctgcaga 502 || || ||||| |||| ||||||| ||||||||||| Sbjct: 5731059 atagctttggctgctcgacttcccaatggacctgcaga 5731022 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 551 tacttttgtatcactctcaagagctgctttagctgaactcatgcc 595 |||| |||||||||||||||| |||||||| ||||| |||||||| Sbjct: 5730633 tactcttgtatcactctcaagtgctgcttttgctgagctcatgcc 5730589
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 405 agctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatcca 464 ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 27324 agctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaacca 27265 Query: 465 attgccttggcggctctgcttcccagaggacctgcaga 502 || || ||||| |||| ||||||| ||||||||||| Sbjct: 27264 atagctttggctgctcgacttcccaatggacctgcaga 27227 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 551 tacttttgtatcactctcaagagctgctttagctgaactcatgcc 595 |||| |||||||||||||||| |||||||| ||||| |||||||| Sbjct: 26838 tactcttgtatcactctcaagtgctgcttttgctgagctcatgcc 26794
>emb|AJ243088.1|BNA243088 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform A2 (enrA2 gene) Length = 1332 Score = 71.9 bits (36), Expect = 2e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 456 atgaatccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcact 515 ||||| |||||||| || || |||| |||||||| |||||||||||| |||||||| || Sbjct: 995 atgaagccaattgctttcgctgctcggcttcccaaaggacctgcagagatggtgttgacc 936 Query: 516 cggattttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagct 575 | || || ||| | |||||||||||| ||||| || |||||||||||| || || Sbjct: 935 ctaatgttttgtttccttccagcttcaaatgcaagcacccgtgtatcactctctagtgcg 876 Query: 576 gctttagctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaat 631 ||||| || |||||||| || || ||||| |||||||| | |||||||| ||||| Sbjct: 875 gctttggcagaactcatacctccaccatacccaggaatgattctttcagaagcaat 820 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Minus Query: 339 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 398 ||||| |||||||| ||||| ||||| |||| || ||||| | |||||| ||||||||| Sbjct: 1112 ccagttatggcagaggccaatggagataccaagaaggctgctgcattcccaacttcatct 1053 Query: 399 gc 400 || Sbjct: 1052 gc 1051
>emb|AJ243089.1|BNA243089 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform B1 (enrB1 gene) Length = 1384 Score = 63.9 bits (32), Expect = 6e-07 Identities = 140/176 (79%) Strand = Plus / Minus Query: 456 atgaatccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttcact 515 ||||| |||||||| || || |||| |||||||| |||||||||||| |||||||| || Sbjct: 1014 atgaagccaattgctttcgctgctcggcttcccaaaggacctgcagagatggtgttgacc 955 Query: 516 cggattttgcctttgcgtccagcttcaaaagcaagtacttttgtatcactctcaagagct 575 | || || ||| | |||||||||||| ||||| || |||||||||||| || || Sbjct: 954 ctaatgttttgtttccttccagcttcaaatgcaagcacacgtgtatcactctctagtgcg 895 Query: 576 gctttagctgaactcatgccaccgccatatccaggaattgtcctttcagatgcaat 631 || || || |||||||| || || ||||| || ||||| |||||||||| ||||| Sbjct: 894 gccttggcagaactcatacctccaccatacccgggaatgatcctttcagaggcaat 839
>emb|AJ243090.1|BNA243090 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform B2 (enrB2 gene) Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 339 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 398 ||||| |||||||| ||||| ||||| |||| || ||||||| |||||| ||||||||| Sbjct: 1137 ccagttatggcagatgccaatggagataccaagaaggctgccgcattcccaacttcatct 1078 Query: 399 gc 400 || Sbjct: 1077 gc 1076 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Minus Query: 438 tactcgatcatcttctcaatgaatccaattgccttggcggctctgcttcccagaggacct 497 ||||||||||| | || ||||| |||||||| || || |||| |||||||| ||| ||| Sbjct: 1038 tactcgatcattgtgtctatgaacccaattgctttagctgctcggcttcccaaagggcct 979 Query: 498 gcagatatggtgtt 511 ||||| || ||||| Sbjct: 978 gcagagatagtgtt 965 Score = 44.1 bits (22), Expect = 0.56 Identities = 79/98 (80%) Strand = Plus / Minus Query: 534 ccagcttcaaaagcaagtacttttgtatcactctcaagagctgctttagctgaactcatg 593 ||||||||||| ||||| || |||||||||||| || || || || || |||||||| Sbjct: 942 ccagcttcaaatgcaagcacacgtgtatcactctctagtgcggccttggcagaactcata 883 Query: 594 ccaccgccatatccaggaattgtcctttcagatgcaat 631 || || ||||| || ||||| |||||||||| ||||| Sbjct: 882 cctccaccatacccgggaatgatcctttcagaggcaat 845
>gb|S60064.1|S60064 Brassica napus enoyl-acyl carrier protein reductase mRNA, complete cds Length = 1358 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 339 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 398 ||||| |||||||| ||||| ||||| |||| || ||||||| |||||| ||||||||| Sbjct: 1119 ccagttatggcagatgccaatggagataccaagaaggctgccgcattcccaacttcatct 1060 Query: 399 gc 400 || Sbjct: 1059 gc 1058 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Minus Query: 438 tactcgatcatcttctcaatgaatccaattgccttggcggctctgcttcccagaggacct 497 ||||||||||| | || ||||| |||||||| || || |||| |||||||| ||| ||| Sbjct: 1020 tactcgatcattgtgtctatgaacccaattgctttagctgctcggcttcccaaagggcct 961 Query: 498 gcagatatggtgtt 511 ||||| || ||||| Sbjct: 960 gcagagatagtgtt 947 Score = 44.1 bits (22), Expect = 0.56 Identities = 79/98 (80%) Strand = Plus / Minus Query: 534 ccagcttcaaaagcaagtacttttgtatcactctcaagagctgctttagctgaactcatg 593 ||||||||||| ||||| || |||||||||||| || || || || || |||||||| Sbjct: 924 ccagcttcaaatgcaagcacacgtgtatcactctctagtgcggccttggcagaactcata 865 Query: 594 ccaccgccatatccaggaattgtcctttcagatgcaat 631 || || ||||| || ||||| |||||||||| ||||| Sbjct: 864 cctccaccatacccgggaatgatcctttcagaggcaat 827
>emb|AJ003124.1|PHAJ3124 Petunia hybrida pte gene Length = 5047 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 315 ccattgtcgacgtaaacagtcgagccagtgatggcagaagccaaaggagacaccagaaat 374 |||||||| || || ||||| | ||||||||| || |||||||||||||| ||||||| Sbjct: 4265 ccattgtcaacatacacagtggcgccagtgattgctgaagccaaaggagatgccagaaaa 4206 Query: 375 gctgccgtattcccgac 391 || || || |||||||| Sbjct: 4205 gcagcagtgttcccgac 4189 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 551 tacttttgtatcactctcaagagctgctttagctgaactcatgccaccgccatatc 606 ||||||||| |||||||| | ||| ||||| ||||||||||| || || ||||||| Sbjct: 3364 tacttttgtgtcactctccaaagcagcttttgctgaactcataccgcctccatatc 3309
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 544 aagcaagtacttttgtatcactctcaagagctgctttagctgaactcatgccaccgccat 603 ||||||| | |||||||||||| || | ||| ||||| |||| ||||||||| ||||||| Sbjct: 726073 aagcaagcatttttgtatcactttctaaagcagcttttgctgcactcatgcctccgccat 726014 Query: 604 a 604 | Sbjct: 726013 a 726013
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 554 ttttgtatcactctcaagagctgctttagctgaactcatgccaccgccatatccaggaa 612 |||||||||||| || | ||| ||||| |||| |||||||| ||||||||||| |||| Sbjct: 431191 ttttgtatcactttctaaagcagcttttgctgcgctcatgcctccgccatatcctggaa 431249
>gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, complete sequence Length = 200450 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 132 cagccatcccctcttttttctcctgcc 158 ||||| ||||||||||||||||||||| Sbjct: 178821 cagccttcccctcttttttctcctgcc 178847
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 132 cagccatcccctcttttttctcctgcc 158 ||||| ||||||||||||||||||||| Sbjct: 121280 cagccttcccctcttttttctcctgcc 121306
>gb|AC025056.5|AC025056 Homo sapiens chromosome 8, clone RP11-400G5, complete sequence Length = 166222 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 ctctttattcaacacaatcaag 222 |||||||||||||||||||||| Sbjct: 88371 ctctttattcaacacaatcaag 88350
>emb|AL118557.5|CNS01DRT Human chromosome 14 DNA sequence BAC R-1033H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214175 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 caacagccatcccctctttttt 150 |||||||||||||||||||||| Sbjct: 81157 caacagccatcccctctttttt 81178
>dbj|AB009777.1| Homo sapiens gene for osteonidogen, promoter region Length = 5332 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 caacagccatcccctctttttt 150 |||||||||||||||||||||| Sbjct: 510 caacagccatcccctctttttt 489
>gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, complete sequence Length = 120189 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 acagtatcagcaacaacaaca 64 ||||||||||||||||||||| Sbjct: 53372 acagtatcagcaacaacaaca 53352
>emb|CR318609.7| Zebrafish DNA sequence from clone DKEY-95L14 in linkage group 19, complete sequence Length = 75965 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 34 cccactgaacacagtatcagcaacaacaa 62 |||||||| |||||| ||||||||||||| Sbjct: 23099 cccactgaccacagtttcagcaacaacaa 23127
>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a novel gene, complete sequence Length = 183342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 acagtatcagcaacaacaaca 64 ||||||||||||||||||||| Sbjct: 48741 acagtatcagcaacaacaaca 48721
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ttttctcctgccctcagctct 167 ||||||||||||||||||||| Sbjct: 70400 ttttctcctgccctcagctct 70380
>gb|AE017158.1| Chlamydophila pneumoniae TW-183, section 2 of 4 of the complete genome Length = 300380 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 572 agctgctttagctgaactcatgccaccgccatatccaggaa 612 ||||||||| || ||||||||||| || || |||||||||| Sbjct: 149199 agctgcttttgccgaactcatgccccctccgtatccaggaa 149159
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 4/10 Length = 349459 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 ttgcgtccagcttcaaaagca 548 ||||||||||||||||||||| Sbjct: 268299 ttgcgtccagcttcaaaagca 268279
>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence Length = 160042 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cctcttttttctcctgccctc 161 ||||||||||||||||||||| Sbjct: 33748 cctcttttttctcctgccctc 33728
>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence Length = 169385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cctcttttttctcctgccctc 161 ||||||||||||||||||||| Sbjct: 98711 cctcttttttctcctgccctc 98691
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 572 agctgctttagctgaactcatgccaccgccatatccaggaa 612 ||||||||| || ||||||||||| || || |||||||||| Sbjct: 388635 agctgcttttgccgaactcatgccccctccgtatccaggaa 388675
>gb|AC112083.7| Rattus norvegicus BAC CH230-288C21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 191137 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 gagccagtgatggcagaagccaaag 360 |||| |||||||||||||||||||| Sbjct: 66016 gagcaagtgatggcagaagccaaag 65992
>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown, complete sequence Length = 232130 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cctcttttttctcctgccctc 161 ||||||||||||||||||||| Sbjct: 95165 cctcttttttctcctgccctc 95145
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 ttgcgtccagcttcaaaagca 548 ||||||||||||||||||||| Sbjct: 1313114 ttgcgtccagcttcaaaagca 1313094
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 572 agctgctttagctgaactcatgccaccgccatatccaggaa 612 ||||||||| || ||||||||||| || || |||||||||| Sbjct: 452562 agctgcttttgccgaactcatgccccctccgtatccaggaa 452522
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 572 agctgctttagctgaactcatgccaccgccatatccaggaa 612 ||||||||| || ||||||||||| || || |||||||||| Sbjct: 452271 agctgcttttgccgaactcatgccccctccgtatccaggaa 452231
>gb|AC004552.1|AC004552 Homo sapiens Xp22 BAC GSHB-184P14 (Genome Systems Human BAC library) complete sequence Length = 137271 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 ctctgcttcccagaggacctg 498 ||||||||||||||||||||| Sbjct: 67369 ctctgcttcccagaggacctg 67389
>gb|AC005386.1|AC005386 citb_57_l_21, complete sequence Length = 196361 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ttttctcctgccctcagctct 167 ||||||||||||||||||||| Sbjct: 163508 ttttctcctgccctcagctct 163488
>gb|AC162375.2| Mus musculus BAC clone RP24-466F1 from chromosome 9, complete sequence Length = 164119 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 537 gcttcaaaagcaagtactttt 557 ||||||||||||||||||||| Sbjct: 149034 gcttcaaaagcaagtactttt 149014
>gb|L81766.1|HSL81766 Homo sapiens (subclone 9_d11 from P1 H18) DNA sequence, complete sequence Length = 4220 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 cctcttttttctcctgccctc 161 ||||||||||||||||||||| Sbjct: 3882 cctcttttttctcctgccctc 3902
>gb|L05072.1|HUMIFNRF1A Homo sapiens interferon regulatory factor 1 gene, complete cds Length = 7721 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 cctcttttttctcctgccctc 161 ||||||||||||||||||||| Sbjct: 3606 cctcttttttctcctgccctc 3626
>ref|NM_187851.1| Oryza sativa (japonica cultivar-group), Ozsa8295 predicted mRNA Length = 2382 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gtatcagcaacaacaacatt 66 |||||||||||||||||||| Sbjct: 1748 gtatcagcaacaacaacatt 1729
>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete sequence Length = 116865 Score = 40.1 bits (20), Expect = 8.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 453 tcaatgaatccaattgccttggcggctctgcttcccagaggacctgcagatatggtgttc 512 |||||||| |||||||| || || || |||||| || |||||||||||||| ||||| Sbjct: 31547 tcaatgaaaccaattgctttcgcagcatggcttccaagtggacctgcagatatagtgtta 31606 Query: 513 actc 516 |||| Sbjct: 31607 actc 31610
>gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, complete sequence Length = 233783 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 tgatggcagaagccaaaggagaca 366 |||||||||||||||||| ||||| Sbjct: 50005 tgatggcagaagccaaagcagaca 49982
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ctgcttcccagaggacctgc 499 |||||||||||||||||||| Sbjct: 31793 ctgcttcccagaggacctgc 31774
>gb|AC126469.7| Homo sapiens 3 BAC RP11-644C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110204 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 atggcagaagccaaaggaga 364 |||||||||||||||||||| Sbjct: 25665 atggcagaagccaaaggaga 25684
>emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chromosome 1 Contains the gene for a novel protein (FLJ35728) and a CpG island, complete sequence Length = 169226 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tctgcttcccagaggacctg 498 |||||||||||||||||||| Sbjct: 69821 tctgcttcccagaggacctg 69802
>emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M16 on chromosome 1p36.11-36.23 Contains four novel genes, a novel gene (FLJ33962), a novel gene (MGC10731), the 3' end of a novel gene (KIAA1332), a metallothionein family pseudogene and three CpG islands, complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 atggcagaagccaaaggaga 364 |||||||||||||||||||| Sbjct: 30330 atggcagaagccaaaggaga 30311
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 aatgaatccaattgccttggcggc 478 ||||||||||| |||||||||||| Sbjct: 1150460 aatgaatccaactgccttggcggc 1150483
>gb|DQ121061.1| Hucho taimen clone ZA-56 microsatellite sequence Length = 726 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cagtatcagcaacaacaaca 64 |||||||||||||||||||| Sbjct: 498 cagtatcagcaacaacaaca 517
>emb|AL935259.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 8/11 Length = 254050 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 acaccagaaatgctgccgta 383 |||||||||||||||||||| Sbjct: 129282 acaccagaaatgctgccgta 129301
>emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, complete sequence Length = 124330 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ccatcccctcttttttctcc 154 |||||||||||||||||||| Sbjct: 13448 ccatcccctcttttttctcc 13429
>gb|AC008705.6| Homo sapiens chromosome 5 clone CTB-77H17, complete sequence Length = 159709 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 atggcagaagccaaaggaga 364 |||||||||||||||||||| Sbjct: 931 atggcagaagccaaaggaga 912
>gb|AC022101.4| Homo sapiens chromosome 5 clone CTC-210G5, complete sequence Length = 173691 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 ttgtatcactctcaagagct 575 |||||||||||||||||||| Sbjct: 50697 ttgtatcactctcaagagct 50716
>gb|AC011369.4| Homo sapiens chromosome 5 clone CTB-105N12, complete sequence Length = 141529 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 atggcagaagccaaaggaga 364 |||||||||||||||||||| Sbjct: 98981 atggcagaagccaaaggaga 98962
>gb|AF181725.1| Brassica oleracea cultivar Rapid Cycling enoyl-ACP reductase (ENAR-1) gene, partial cds Length = 499 Score = 40.1 bits (20), Expect = 8.8 Identities = 50/60 (83%) Strand = Plus / Minus Query: 533 tccagcttcaaaagcaagtacttttgtatcactctcaagagctgctttagctgaactcat 592 |||||||||||| ||||| || |||||||||||| || || ||||| || |||||||| Sbjct: 301 tccagcttcaaatgcaagcacccgtgtatcactctctagtgcggctttggcagaactcat 242
>gb|AF181724.1| Brassica napus cultivar Drakkar enoyl-ACP reductase (ENAR-2) gene, partial cds Length = 571 Score = 40.1 bits (20), Expect = 8.8 Identities = 50/60 (83%) Strand = Plus / Minus Query: 533 tccagcttcaaaagcaagtacttttgtatcactctcaagagctgctttagctgaactcat 592 |||||||||||| ||||| || |||||||||||| || || ||||| || |||||||| Sbjct: 371 tccagcttcaaatgcaagcacccgtgtatcactctctagtgcggctttggcagaactcat 312
>gb|AF181723.1| Brassica napus cultivar Drakkar enoyl-ACP reductase (ENAR-1) gene, partial cds Length = 545 Score = 40.1 bits (20), Expect = 8.8 Identities = 50/60 (83%) Strand = Plus / Minus Query: 533 tccagcttcaaaagcaagtacttttgtatcactctcaagagctgctttagctgaactcat 592 |||||||||||| ||||| || |||||||||||| || || ||||| || |||||||| Sbjct: 347 tccagcttcaaatgcaagcacccgtgtatcactctctagtgcggctttggcagaactcat 288
>gb|U60334.1|HSU60334 Human chromosome 1 Wilms' tumor suppressor protein WT1 DNA binding region Length = 3227 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tctgcttcccagaggacctg 498 |||||||||||||||||||| Sbjct: 2813 tctgcttcccagaggacctg 2794
>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence Length = 218905 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tgggccaaagaggtggtgct 106 |||||||||||||||||||| Sbjct: 108792 tgggccaaagaggtggtgct 108811
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 gagtactcgatcatcttctc 454 |||||||||||||||||||| Sbjct: 4139676 gagtactcgatcatcttctc 4139657
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gtatcagcaacaacaacatt 66 |||||||||||||||||||| Sbjct: 8268088 gtatcagcaacaacaacatt 8268069
>gb|AF280903.1|AF280903 Pongo pygmaeus clone 3562 chromosome Xq genomic sequence Length = 840 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tctgcttcccagaggacctg 498 |||||||||||||||||||| Sbjct: 283 tctgcttcccagaggacctg 302
>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence Length = 199704 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tgggccaaagaggtggtgct 106 |||||||||||||||||||| Sbjct: 54397 tgggccaaagaggtggtgct 54416
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gtatcagcaacaacaacatt 66 |||||||||||||||||||| Sbjct: 62019 gtatcagcaacaacaacatt 62000
>emb|BX649333.9| Zebrafish DNA sequence from clone DKEY-200F3 in linkage group 4, complete sequence Length = 273859 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccatcccctcttttttctcc 154 |||||||||||||||||||| Sbjct: 48803 ccatcccctcttttttctcc 48822
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 gagtactcgatcatcttctc 454 |||||||||||||||||||| Sbjct: 49690 gagtactcgatcatcttctc 49671
>gb|AF218793.1|AF218793 Xenopus laevis mRNA capping enzyme (xCAP1a) mRNA, complete cds Length = 2395 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 gctgaactcatgccaccgcc 601 |||||||||||||||||||| Sbjct: 1811 gctgaactcatgccaccgcc 1830
>gb|AC007955.4|AC007955 Homo sapiens chromosome 14 clone CTD-3014H8 and RP11-285P21 map 14q24.3, complete sequence Length = 163312 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tcatcttctcaatgaatcca 464 |||||||||||||||||||| Sbjct: 114150 tcatcttctcaatgaatcca 114131
>ref|XM_308264.2| Anopheles gambiae str. PEST ENSANGP00000010835 (ENSANGG00000008346), partial mRNA Length = 381 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atcagcaacaacaacattcg 68 |||||||||||||||||||| Sbjct: 269 atcagcaacaacaacattcg 288
>emb|AJ330610.1|HSA330610 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4P-E15RS Length = 676 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 acaaatgggccaaagaggtggtgc 105 |||||||||||||||| ||||||| Sbjct: 524 acaaatgggccaaagaagtggtgc 501
>gb|AC004973.1|AC004973 Homo sapiens PAC clone RP5-1139I1 from Xq23, complete sequence Length = 97037 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tctgcttcccagaggacctg 498 |||||||||||||||||||| Sbjct: 51053 tctgcttcccagaggacctg 51072
>emb|BX000462.10| Zebrafish DNA sequence from clone DKEY-114F6 in linkage group 1, complete sequence Length = 167671 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ccatcccctcttttttctcc 154 |||||||||||||||||||| Sbjct: 117201 ccatcccctcttttttctcc 117182
>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 213239 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 atggcagaagccaaaggaga 364 |||||||||||||||||||| Sbjct: 55793 atggcagaagccaaaggaga 55812
>emb|AL049775.2|CNS00006 Human chromosome 14 DNA sequence BAC R-497E19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181433 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 609 ggaattgtcctttcagatgc 628 |||||||||||||||||||| Sbjct: 53965 ggaattgtcctttcagatgc 53984
>emb|AL049832.3|CNS0000G Human chromosome 14 DNA sequence BAC R-63D17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177172 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcatcttctcaatgaatcca 464 |||||||||||||||||||| Sbjct: 2655 tcatcttctcaatgaatcca 2674
>gb|AC119248.8| Mus musculus chromosome 8, clone RP24-273H15, complete sequence Length = 183813 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ctgcttcccagaggacctgc 499 |||||||||||||||||||| Sbjct: 167100 ctgcttcccagaggacctgc 167081
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 tatcactctcaagagctgct 578 |||||||||||||||||||| Sbjct: 101801 tatcactctcaagagctgct 101782
>gb|L78810.1|HUMYWXD703 Homo sapiens ADP/ATP carrier protein (ANT-2) gene, complete cds Length = 135038 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tctgcttcccagaggacctg 498 |||||||||||||||||||| Sbjct: 4480 tctgcttcccagaggacctg 4499
>dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47K21, TM0260, complete sequence Length = 79947 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cagtatcagcaacaacaaca 64 |||||||||||||||||||| Sbjct: 74546 cagtatcagcaacaacaaca 74527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,521,564 Number of Sequences: 3902068 Number of extensions: 6521564 Number of successful extensions: 134665 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 134239 Number of HSP's gapped (non-prelim): 425 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)