ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3p24 |
|---|---|
| Clone Library Name | barley_pub |
>CTDSL_MOUSE (P58465) CTD small phosphatase-like protein (CTDSP-like) (Small| C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) Length = 276 Score = 85.5 bits (210), Expect = 3e-17 Identities = 43/94 (45%), Positives = 58/94 (61%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD +F R FRESCVF Y KDL+ +G +L+KV I+DN+P + Sbjct: 174 YADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHP 232 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDV 101 N +P++SW++D D L LIPF E L+ DDV Sbjct: 233 ENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDV 266
>CTDSL_HUMAN (O15194) CTD small phosphatase-like protein (CTDSP-like) (Small| C-terminal domain phosphatase 3) (Small CTD phosphatase 3) (SCP3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) (RBSP3) (YA22 protei Length = 276 Score = 85.5 bits (210), Expect = 3e-17 Identities = 43/94 (45%), Positives = 58/94 (61%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD +F R FRESCVF Y KDL+ +G +L+KV I+DN+P + Sbjct: 174 YADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHP 232 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDV 101 N +P++SW++D D L LIPF E L+ DDV Sbjct: 233 ENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDV 266
>TIM50_YEAST (Q02776) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 476 Score = 84.3 bits (207), Expect = 6e-17 Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 2/101 (1%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQ 206 +Y+D++ ++LDP + S F+E CV+ + + KDL+ + DL+KV IID P ++LQ Sbjct: 243 MYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQ 302 Query: 205 VNNGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 N IP+E W N D+ L +LIPFLE LA DVRPI+ Sbjct: 303 PENAIPMEPW-NGEADDKLVRLIPFLEYLATQQTKDVRPIL 342
>CTDSL_CHICK (Q9PTJ6) CTD small phosphatase-like protein (CTDSP-like) (Small| C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) Length = 275 Score = 84.0 bits (206), Expect = 8e-17 Identities = 42/100 (42%), Positives = 61/100 (61%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD +F R FRESCVF Y KDL+ +G +L+KV I+DN+P + Sbjct: 173 YADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHP 231 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDVRPIIAK 83 N +P++SW++D D L LIPF E L+ ++V ++ K Sbjct: 232 ENAVPVQSWFDDMTDTELLDLIPFFEGLSKEEEVYSMLHK 271
>CTDS1_MOUSE (P58466) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP) Length = 261 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/98 (41%), Positives = 58/98 (59%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD F R FRESCVF Y KDL+ +G DL +V I+DN+P + Sbjct: 158 YADPVADLLDKWGA-FRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHP 216 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDVRPII 89 +N +P+ SW+++ D L L+PF E L+ DDV ++ Sbjct: 217 DNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVL 254
>CTDS1_HUMAN (Q9GZU7) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF) Length = 261 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/98 (41%), Positives = 58/98 (59%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD F R FRESCVF Y KDL+ +G DL +V I+DN+P + Sbjct: 158 YADPVADLLDKWGA-FRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHP 216 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDVRPII 89 +N +P+ SW+++ D L L+PF E L+ DDV ++ Sbjct: 217 DNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVL 254
>CTDS2_HUMAN (O14595) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 2 (EC 3.1.3.16) (Small CTD phosphatase 2) (SCP2) (Nuclear LIM interactor-interacting factor 2) (NLI-interacting factor 2) (Protein OS-4) Length = 271 Score = 82.4 bits (202), Expect = 2e-16 Identities = 42/94 (44%), Positives = 57/94 (60%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD +F R FRESCVF + Y KDL+ +G DL K I+DN+P + Sbjct: 169 YADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHP 227 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDV 101 N +P++SW++D D L LIP E L+ A+DV Sbjct: 228 ENAVPVQSWFDDMADTELLNLIPIFEELSGAEDV 261
>CTDS2_MOUSE (Q8BX07) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 2 (EC 3.1.3.16) Length = 270 Score = 81.3 bits (199), Expect = 5e-16 Identities = 41/94 (43%), Positives = 56/94 (59%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD + D LD +F R FRE+CVF + Y KDL+ +G DL K I+DN+P + Sbjct: 168 YADPVTDLLD-RCGVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSPASYIFHP 226 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDV 101 N +P++SW++D D L LIP E L+ DDV Sbjct: 227 ENAVPVQSWFDDMADTELLNLIPVFEELSGTDDV 260
>YHG4_YEAST (P38757) Hypothetical 50.6 kDa protein in RPL14B-GPA1 intergenic| region Length = 446 Score = 79.3 bits (194), Expect = 2e-15 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 12/115 (10%) Frame = -1 Query: 382 YADQLLDRLDPE-NTLFSKRFFRESCVFTES-GYTKDLTVI----------GVDLAKVAI 239 YAD ++D L+ + FSKR++R CV + GY KDL+++ L V I Sbjct: 325 YADPVIDWLESSFPSSFSKRYYRSDCVLRDGVGYIKDLSIVKDSEENGKGSSSSLDDVII 384 Query: 238 IDNTPQVFQLQVNNGIPIESWYNDPFDEGLSQLIPFLETLAVADDVRPIIAKRFG 74 IDN+P + + V+N I +E W +DP D L L+PFLE + + DVR I+A + G Sbjct: 385 IDNSPVSYAMNVDNAIQVEGWISDPTDTDLLNLLPFLEAMRYSTDVRNILALKHG 439
>YA22_SCHPO (Q09695) Hypothetical protein C2F7.02c in chromosome I| Length = 325 Score = 78.2 bits (191), Expect = 5e-15 Identities = 41/98 (41%), Positives = 57/98 (58%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YAD +LD LD + + R FRE+C E + KDL+ +G +L IIDN+P + Sbjct: 225 YADPVLDMLDHSHVI-RHRLFREACCNYEGNFVKDLSQLGRNLEDSIIIDNSPSSYIFHP 283 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAVADDVRPII 89 ++ +PI SW+ND D L LIPFLE LA DV ++ Sbjct: 284 SHAVPISSWFNDMHDMELIDLIPFLEHLARVPDVSTVL 321
>TIM50_CANGA (Q6FRX4) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 485 Score = 77.0 bits (188), Expect = 1e-14 Identities = 39/101 (38%), Positives = 63/101 (62%), Gaps = 2/101 (1%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQ 206 +YA+++ +++DP + S F+E CV+ + + KDL+ + DL KV IID ++LQ Sbjct: 249 MYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLKKVMIIDTDENSYKLQ 308 Query: 205 VNNGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 N IP++ W + D+ L +LIPFLE +A +DVRPI+ Sbjct: 309 PENAIPMDPW-DGKADDKLLRLIPFLEYMATQQVEDVRPIL 348
>TIM50_KLULA (Q6CM45) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 480 Score = 74.7 bits (182), Expect = 5e-14 Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 2/101 (1%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQ 206 +YA+++ ++LDP + + F+E C++ + + KDL+ + DL KV IID F+LQ Sbjct: 246 MYAEKIAEKLDPIHAFITYNLFKEHCLYKDGVHIKDLSKLNRDLGKVLIIDTDENSFKLQ 305 Query: 205 VNNGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 N I +E W + D+ L +LIPFLE LA DVRPI+ Sbjct: 306 PENAIYLEPW-DGKADDRLLRLIPFLEYLATQQVSDVRPIL 345
>PSR2_YEAST (Q07949) Probable phosphatase PSR2 (EC 3.1.3.-) (Plasma membrane| sodium response protein 2) Length = 397 Score = 74.3 bits (181), Expect = 7e-14 Identities = 37/89 (41%), Positives = 53/89 (59%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 YA+ LLD LDP T+ R FRE+C E Y K+L+ IG L++ I+DN+P + Sbjct: 295 YANPLLDTLDPNGTIHH-RLFREACYNYEGNYIKNLSQIGRPLSETIILDNSPASYIFHP 353 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLA 116 + +PI SW++D D L +IP LE L+ Sbjct: 354 QHAVPISSWFSDTHDNELLDIIPLLEDLS 382
>PSR1_YEAST (Q07800) Phosphatase PSR1 (EC 3.1.3.-) (Plasma membrane sodium| response protein 1) Length = 427 Score = 72.0 bits (175), Expect = 3e-13 Identities = 37/90 (41%), Positives = 52/90 (57%) Frame = -1 Query: 382 YADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQV 203 Y D LLD LD + + R FRE+C E Y K+L+ IG L+ + I+DN+P + Sbjct: 325 YGDPLLDILDTDKVIHH-RLFREACYNYEGNYIKNLSQIGRPLSDIIILDNSPASYIFHP 383 Query: 202 NNGIPIESWYNDPFDEGLSQLIPFLETLAV 113 + IPI SW++D D L +IP LE L+V Sbjct: 384 QHAIPISSWFSDTHDNELLDIIPLLEDLSV 413
>TIM50_CANAL (Q59W44) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 469 Score = 71.6 bits (174), Expect = 4e-13 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQ 206 +Y+D+ +++LDP + S FRE+C + + KDL+++ DL K +ID LQ Sbjct: 239 IYSDKTVNKLDPYHAYISYALFREACRYKDGKLIKDLSLLNRDLGKTVMIDVDEDSAALQ 298 Query: 205 VNNGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 N I ++ W P DE L LIPFLE LA DVRPI+ Sbjct: 299 PENSIIVKKWEGQP-DEYLISLIPFLEYLATQPVKDVRPIL 338
>TIM50_ASPFU (Q4WI16) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 501 Score = 71.6 bits (174), Expect = 4e-13 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 ADQ+L +LDP + FRE+ + + Y KDL+ + DL+KV +ID + +LQ Sbjct: 276 ADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSYLNRDLSKVILIDTKEEHARLQPE 334 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLETLA--VADDVRPII 89 N I ++ W DP D+ L LIPFLE +A +DVRP++ Sbjct: 335 NAIILDKWLGDPKDKNLVALIPFLEYIAGMGVEDVRPVL 373
>TIM50_DEBHA (Q6BVY9) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 471 Score = 70.5 bits (171), Expect = 9e-13 Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQ 206 +Y++ + +LDP + S FRE+C + + KDL+++ DL K +ID + +Q Sbjct: 241 MYSENTVGKLDPFHAYVSYALFREACRYKDGKLVKDLSLLNRDLGKTVLIDVEEDSWSMQ 300 Query: 205 VNNGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 +N IP++ W + +D+ L +LIPFLE LA DVRPI+ Sbjct: 301 PDNAIPMKPW-DGSYDDTLVKLIPFLEYLATQPVKDVRPIL 340
>TIM50_USTMA (Q4PEW9) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 493 Score = 70.1 bits (170), Expect = 1e-12 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A ++++LDP+ + FRESC + KDL + DL+KV ++D P F L Sbjct: 274 AGPIIEKLDPDRRFITYTLFRESCRTVDGKLVKDLNHLNRDLSKVVVVDTNPDSFHLHPE 333 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 NGI ++ W + D L LIPF E + + DDVR I Sbjct: 334 NGILVKPWKGEREDRELIGLIPFFEAIGIYNIDDVRNTI 372
>TIM50_CRYNE (Q5KNV7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 516 Score = 69.7 bits (169), Expect = 2e-12 Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A + +++DP R FRES + KD++ + D +KV ++D P+ LQ Sbjct: 289 AAPIAEKIDPYQAFMPYRLFRESTRSVKGKVVKDISFLNRDPSKVIVLDVNPEHVALQPE 348 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLETLAVAD--DVRPII 89 NGI ++ W P D+GL +IPFLE++ + + DVRPI+ Sbjct: 349 NGIVLQPWNGSPGDKGLVDMIPFLESIGIFNPADVRPIL 387
>TIM50_ASHGO (Q75A73) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 476 Score = 68.9 bits (167), Expect = 3e-12 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQ 206 VY+ +++++LDP + F++ CV+ + + KDL+ + DL K IID P +LQ Sbjct: 242 VYSKKVVEKLDPIRAFITYNLFKDHCVYKDGIHIKDLSHLNRDLGKTLIIDTDPNSVKLQ 301 Query: 205 VNNGIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 + N I E W + D+ L + IPFLE L +DVRPI+ Sbjct: 302 MENAILAEPW-DGKADDALLRYIPFLEYLVTQPINDVRPIL 341
>TIM50_EMENI (Q5B4P0) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 532 Score = 67.8 bits (164), Expect = 6e-12 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 ADQ+L +LDP + FRE+ + + Y KDL+ + DL+KV +ID + +LQ Sbjct: 305 ADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSYLNRDLSKVILIDTKEEHARLQPE 363 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLETLA--VADDVRPII 89 N I ++ W +P D+ L LIPFLE LA DDVR ++ Sbjct: 364 NAIILDKWNGNPKDKTLVALIPFLEYLAGMGVDDVRTVL 402
>TIM50_SCHPO (O13636) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 452 Score = 67.0 bits (162), Expect = 1e-11 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A ++D++DP + S RES + + KDL+ + DL++V +ID P+ + Q + Sbjct: 230 AKPIIDKIDPYHVSISAVLTRESSKYEKGKVIKDLSYLNRDLSRVIMIDTNPESWSKQPD 289 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLETLAVAD--DVRPII 89 N I + W +P D+ L LIP LE +A+ D DVRP++ Sbjct: 290 NAIAMAPWTGNPKDKELVGLIPLLEFIAIMDIKDVRPVL 328
>TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 466 Score = 67.0 bits (162), Expect = 1e-11 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 2/98 (2%) Frame = -1 Query: 376 DQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNN 197 ++L+ +LDP + FS RE + + KDL+++ D+ K+ IID Q N Sbjct: 247 EKLIMKLDPYHAWFSHVLTREHTTYEDGKLVKDLSLMNRDMGKIIIIDPDTGCTMKQPEN 306 Query: 196 GIPIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 IPIE W P D+ L +LIPFLE L +DVRPI+ Sbjct: 307 SIPIEPWKGTPGDKELVKLIPFLEWLVSQNVNDVRPIL 344
>TIM50_MOUSE (Q9D880) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 353 Score = 58.2 bits (139), Expect = 5e-09 Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 L+D +DP + S R FR++ + E + KD++ + D A+V ++D + F+LQ NG+ Sbjct: 204 LIDSVDPHGFI-SYRLFRDATRYMEGHHVKDISCLNRDPARVVVVDCKKEAFRLQPFNGV 262 Query: 190 PIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 + W + D L L FL+T+A+ +DVR ++ Sbjct: 263 ALRPWDGNSDDRVLLDLSAFLKTIALNQVEDVRTVL 298
>TIM50_NEUCR (Q874C1) Import inner membrane translocase subunit tim-50,| mitochondrial precursor Length = 540 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A+ ++ ++DP + FRE+ + + KDL+ + DL+KV IID P+ + Q Sbjct: 302 AEPIVRKMDPYRFIMWP-LFREATKYKDGEIVKDLSYLNRDLSKVIIIDTDPKHVRAQPE 360 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLETLAVAD--DVRPII 89 N I + W DP D L L+PFLE + + DVR ++ Sbjct: 361 NAIVLPKWKGDPKDTELVSLVPFLEFIHTMNFPDVRKVL 399
>TIM50_PONPY (Q5RAJ8) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 353 Score = 57.4 bits (137), Expect = 8e-09 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 L+D +DP + S R FR++ + + + KD++ + D A+V ++D + F+LQ NG+ Sbjct: 204 LIDSVDPHGFI-SYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGV 262 Query: 190 PIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 + W + D L L FL+T+A+ +DVR ++ Sbjct: 263 ALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 298
>TIM50_HUMAN (Q3ZCQ8) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 353 Score = 57.4 bits (137), Expect = 8e-09 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 L+D +DP + S R FR++ + + + KD++ + D A+V ++D + F+LQ NG+ Sbjct: 204 LIDSVDPHGFI-SYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGV 262 Query: 190 PIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 + W + D L L FL+T+A+ +DVR ++ Sbjct: 263 ALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 298
>TIM50_BOVIN (Q3SZB3) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 355 Score = 57.4 bits (137), Expect = 8e-09 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 L+D +DP + S R FR++ + + + KD++ + D A+V ++D + F+LQ NG+ Sbjct: 206 LIDSVDPHGFI-SYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGV 264 Query: 190 PIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 + W + D L L FL+T+A+ +DVR ++ Sbjct: 265 ALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 300
>TIM50_PHYIN (Q5S7T7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor (NIF domain protein 3) Length = 409 Score = 55.5 bits (132), Expect = 3e-08 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A++++ +LDP+ R++ + + KDL+ + DL +V I+D+ P +QLQ Sbjct: 220 AEEIVQKLDPKQCALHI-LSRDATRYLNGAHVKDLSNLNRDLRQVVILDDDPAAYQLQPE 278 Query: 199 NGIPIESWYN--DPFDEGLSQLIPFLETLAV--ADDVRPIIAK 83 N IP+ + N D D L LIPFL+ LA D R +I + Sbjct: 279 NAIPVTPFTNGRDRDDHELKDLIPFLKALASERVPDFRQVIGE 321
>TIM50_BRARE (Q6NWD4) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 387 Score = 55.1 bits (131), Expect = 4e-08 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 L+D +DP+ + R FR++ + E + KD++ + D +KV ++D + F LQ NG+ Sbjct: 239 LIDSIDPQGFVMY-RLFRDATRYMEGHHVKDVSCLNRDTSKVIVVDCKREAFGLQPFNGL 297 Query: 190 PIESWYNDPFDEGLSQLIPFLETLAVA--DDVRPII 89 + W + D L L FL+T+A + +DVR ++ Sbjct: 298 ALCKWDGNSEDRTLYDLAAFLKTIATSGVEDVRSVL 333
>TIM50_GIBZE (Q4I099) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 525 Score = 53.5 bits (127), Expect = 1e-07 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%) Frame = -1 Query: 376 DQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNN 197 + ++ +LDP + +RE+ F + KDL+ + DL+KV IID + + Q +N Sbjct: 292 EPVMRKLDPFRLILWP-LYREATKFEDGEIVKDLSYLNRDLSKVIIIDTKAKHVRNQPDN 350 Query: 196 GIPIESWYNDPFDEGLSQLIPFLETLAVA--DDVRPII 89 I ++ W D D+ L LIPFLE + DVR +I Sbjct: 351 AIILDPWKGDKDDKNLVNLIPFLEYIHTMQYSDVRKVI 388
>TIM50_CAEEL (Q22647) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 452 Score = 48.1 bits (113), Expect = 5e-06 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A ++D DP+ + K FR+ + + KDL+ + DL+KV ID + QL Sbjct: 302 AAPVVDSFDPKQRIMYK-LFRDCTKYMNGHHVKDLSKLNRDLSKVIYIDFDAKSGQLNPE 360 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLET--LAVADDVRPII 89 N + + W + D L L L+T L+ A+DVRP++ Sbjct: 361 NMLRVPEWKGNMDDTSLVDLAELLKTIHLSDAEDVRPML 399
>TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit TIM50-C,| mitochondrial precursor Length = 428 Score = 46.6 bits (109), Expect = 1e-05 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 +LD LDP N R R++ F + + K+L + DL KV ++D ++ +N Sbjct: 285 ILDALDP-NGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTF 343 Query: 190 PIESWYNDPFDEGLSQLIPFLETLAV--ADDVRPII 89 + W+ + D L LI FL+ +A DDVR ++ Sbjct: 344 GLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVL 379
>TI50A_DROME (Q9V9P3) Import inner membrane translocase subunit TIM50-A,| mitochondrial precursor Length = 343 Score = 45.8 bits (107), Expect = 2e-05 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGI 191 LLD LDP + R R + E +TK+L + DL++V ++D P L +N + Sbjct: 196 LLDALDPYGYI-KYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHPDNSL 254 Query: 190 PIESWYNDPFDEGLSQLIPFLETLA--VADDVRPII 89 + W + D L L FL+ +A +DVR ++ Sbjct: 255 VLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVL 290
>TIM50_CAEBR (Q61JS7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 456 Score = 45.1 bits (105), Expect = 4e-05 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Frame = -1 Query: 379 ADQLLDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVN 200 A ++D D + + K FR+ + + KDL+ + DL+KV ID + QL Sbjct: 306 AAPVVDSFDQKQRIMYK-LFRDCTKYMNGHHVKDLSKLNRDLSKVIYIDFDAKSGQLNPE 364 Query: 199 NGIPIESWYNDPFDEGLSQLIPFLET--LAVADDVRPII 89 N + + W + D L L L+T L+ A+DVRP++ Sbjct: 365 NMLRVPEWRGNMDDTSLVDLAELLKTIHLSDAEDVRPML 403
>TIM50_ARATH (Q8VYE2) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 376 Score = 43.5 bits (101), Expect = 1e-04 Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Frame = -1 Query: 385 VYADQL-------LDRLDPENTLFSKRFFRESCVFTESGYTKDLTVIGVDLAKVAIIDNT 227 VY+DQ+ ++LDP N + R + + + +DL+ + D K+ + Sbjct: 235 VYSDQMEMYVLPVCEKLDP-NGYIRYKLARGATKYENGKHYRDLSKLNRDPKKILFVSAN 293 Query: 226 PQVFQLQVNNGIPIESWYNDPFDEGLSQLIPFLETLA--VADDVRPIIA 86 LQ N +PI+ + + D L LIPFLE +A D+RP++A Sbjct: 294 AFESTLQPENSVPIKPYKLEADDTALVDLIPFLEYVARNSPADIRPVLA 342
>CTDP1_MOUSE (Q7TSG2) RNA polymerase II subunit A C-terminal domain phosphatase| (EC 3.1.3.16) (TFIIF-associating CTD phosphatase) Length = 960 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFF-RESCV--FTESGYTKDLTVIGVDLAKVAIIDNTPQVF 215 +YA + LDPE LFS R R+ C+ F+++G ++L G + V IID+ V+ Sbjct: 251 LYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSM--VCIIDDREDVW 308 Query: 214 QLQVN 200 + N Sbjct: 309 KFAPN 313
>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase| (EC 3.1.3.16) (TFIIF-associating CTD phosphatase) Length = 961 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = -1 Query: 385 VYADQLLDRLDPENTLFSKRFF-RESCV--FTESGYTKDLTVIGVDLAKVAIIDNTPQVF 215 +YA + LDPE LFS R R+ C+ F+++G ++L G + V IID+ V+ Sbjct: 251 LYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSM--VCIIDDREDVW 308 Query: 214 QLQVN 200 + N Sbjct: 309 KFAPN 313
>TRMU_RICTY (Q68X66) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 358 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Frame = +1 Query: 121 VSPGMESAEIIP--HQRGHYTS--SLWVYHYSLATGKPAECC 234 +S G++S+ + H++GH+ +L +Y Y +A GK CC Sbjct: 8 MSGGVDSSAVAAMLHEQGHHVIGITLQLYDYGIAVGKKNACC 49
>ECR_AEDAE (P49880) Ecdysone receptor (Ecdysteroid receptor)| (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) Length = 675 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +1 Query: 127 PGMESAEIIPHQRGHYTSSLWVYHYSLATGKP 222 PG+E AE++ H + +Y +L +Y + G P Sbjct: 492 PGLEQAELVEHIQSYYIDTLRIYILNRHAGDP 523
>L_EBOZM (Q05318) Large structural protein (L protein) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2212 Score = 29.3 bits (64), Expect = 2.4 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 6/98 (6%) Frame = -1 Query: 346 NTLFSKRFFRESCVFTESGYTKDLTVIG--VDLAKVAIIDNTPQVFQ-LQVNNGIPIESW 176 +T FS R + + G+ +G +D +++ PQV L N P + + Sbjct: 864 HTFFSVRILQYHHLGFNKGFDLGQLTLGKPLDFGTISLALAVPQVLGGLSFLN--PEKCF 921 Query: 175 YN---DPFDEGLSQLIPFLETLAVADDVRPIIAKRFGN 71 Y DP GL QL +L + + D P+IAK GN Sbjct: 922 YRNLGDPVTSGLFQLKTYLRMIEMDDLFLPLIAKNPGN 959
>Y252_DROME (Q9W4C5) Hypothetical sodium-dependent transporter CG3252| Length = 641 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 152 SLIKGVIIPALYGYTIIHLQLENLRSVVNYG 244 SL+ G+ I A+ G +LQ+EN+R VV G Sbjct: 350 SLLGGITIFAILGNLAHNLQIENIRDVVRSG 380
>ATPG_MYCGA (P33257) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 289 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -1 Query: 289 YTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGIPIESWYNDPFDEGLSQLIPFLE 125 YT + + + K+ +I P +FQ + I + N F+ G+ +IP LE Sbjct: 169 YTNYINSLNFEAKKIQLIPADPSIFQADTLDRINDKFPKNISFEPGVDVIIPALE 223
>TRMU_RICPR (Q9ZDM1) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 358 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Frame = +1 Query: 121 VSPGMESAEIIP--HQRGHYTS--SLWVYHYSLATGKPAECC 234 +S G++S+ + H++GH +L +Y Y +A GK CC Sbjct: 8 MSGGVDSSAVAAMLHEQGHNVIGITLQLYDYGIAVGKKNACC 49
>HIS4_THEET (Q9RPQ5) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 237 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -1 Query: 277 LTVIGVDLAKVAIIDNTPQVFQLQVNNGIPIE 182 L V+ +D A+ I NTP + ++ V GIP++ Sbjct: 47 LHVVDLDGARTGQIQNTPIISEMAVKLGIPVQ 78
>PHBC_RHIET (Q52728) Poly-beta-hydroxybutyrate polymerase (EC 2.3.1.-)| (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) Length = 636 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = +1 Query: 43 LENLSHYPFSCQTSWQLWVGRHQQQQVS---PGMESAEIIPHQRGHY 174 LE S P S WQ W+ H ++V+ PG ++ I G Y Sbjct: 585 LEQASETPGSWWPHWQAWIETHDGRRVAARKPGGDALNAIEEAPGSY 631
>NUAM_PONPY (Q5R911) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTE--SGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNN 197 LL+R+D + TL ++ F + T+ S Y + T+ GV+ A V ++ T F+ + N Sbjct: 357 LLNRVDSD-TLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFN 415 Query: 196 GIPIESW-YND 167 +SW +ND Sbjct: 416 ARIRKSWLHND 426
>NUAM_HUMAN (P28331) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTE--SGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNN 197 LL+R+D + TL ++ F + T+ S Y + T+ GV+ A V ++ T F+ + N Sbjct: 357 LLNRVDSD-TLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFN 415 Query: 196 GIPIESW-YND 167 +SW +ND Sbjct: 416 ARIRKSWLHND 426
>NUAM_BOVIN (P15690) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESCVFTE--SGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNN 197 LL+R+D + TL ++ F + T+ S Y + T+ GV+ A V ++ T F+ + N Sbjct: 357 LLNRVDSD-TLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFN 415 Query: 196 GIPIESW-YND 167 +SW +ND Sbjct: 416 ARIRKSWLHND 426
>UBPY_CAEEL (Q09931) Probable ubiquitin carboxyl-terminal hydrolase K02C4.3 (EC| 3.1.2.15) (Ubiquitin thioesterase) (Ubiquitin-specific processing protease) (Deubiquitinating enzyme) Length = 1302 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = -1 Query: 307 VFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNGIPIESWYNDPFDEGLSQLIPFL 128 +F+ YT+ + G K + + N PQ FQLQV G ++ FD GL + Sbjct: 451 IFSSVCYTESVAEDGTVSVK-SNVRNCPQFFQLQVTYGNLHDALEAATFDHGLGNTASHV 509 Query: 127 ETL 119 L Sbjct: 510 RNL 512
>SYH_RICCN (Q92IK8) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 414 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/53 (24%), Positives = 25/53 (47%) Frame = -1 Query: 241 IIDNTPQVFQLQVNNGIPIESWYNDPFDEGLSQLIPFLETLAVADDVRPIIAK 83 I+D+ + Q + N + +Y D E +LI +L+ L V + P + + Sbjct: 207 ILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYLDILGVKYSINPRLVR 259
>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor| Length = 648 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Frame = +1 Query: 58 HYPFSCQTSWQLWVGRHQQQQVSPGMESAEIIPH--------QRGHYTSSLWVYHYSLAT 213 HYP S Q Q G+ Q PG P Q+GHY +SL T Sbjct: 324 HYPASQQEPGQGQQGQIPASQQQPGQGQQGHYPASLQQPGQGQQGHYPTSLQQLGQGQQT 383 Query: 214 GKPAE 228 G+P + Sbjct: 384 GQPGQ 388
>NUAM_MOUSE (Q91VD9) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = -1 Query: 370 LLDRLDPENTLFSKRFFRESC-VFTESGYTKDLTVIGVDLAKVAIIDNTPQVFQLQVNNG 194 LL+++D +N + F E S Y + T+ GV+ A V ++ T F+ + N Sbjct: 357 LLNKVDSDNLCTEEIFPTEGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNA 416 Query: 193 IPIESW-YND 167 +SW +ND Sbjct: 417 RIRKSWLHND 426 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,617,477 Number of Sequences: 219361 Number of extensions: 1110175 Number of successful extensions: 2992 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 2940 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2985 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
