ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3p24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY341861.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-li... 763 0.0
2gb|AY341862.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-li... 442 e-121
3ref|NM_191905.1| Oryza sativa (japonica cultivar-group), predic... 313 2e-82
4dbj|AK071909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 2e-82
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 182 6e-43
6dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic D... 182 6e-43
7dbj|AK066990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 6e-43
8dbj|AK102504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
9dbj|AK063853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
10dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
11gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete se... 58 2e-05
12dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone... 58 2e-05
13ref|NM_192920.1| Oryza sativa (japonica cultivar-group), predic... 56 9e-05
14gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
15ref|NM_018416.2| Homo sapiens forkhead box J2 (FOXJ2), mRNA 42 1.3
16emb|AL161978.1|HSM802572 Homo sapiens mRNA; cDNA DKFZp762A1712 (... 42 1.3
17emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chr... 42 1.3
18dbj|AK092529.1| Homo sapiens cDNA FLJ35210 fis, clone PROST1000085 42 1.3
19dbj|AK085445.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 1.3
20dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
21gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell... 42 1.3
22gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Can... 42 1.3
23gb|AF155132.1|AF155132 Homo sapiens FOXJ2 forkhead factor mRNA, ... 42 1.3
24dbj|AK099836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
25gb|AF038177.1|AF038177 Homo sapiens clone 23899 mRNA sequence 42 1.3
26emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on ch... 40 5.1
27emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, co... 40 5.1
28emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in... 40 5.1
29gb|AC105957.13| Mus musculus chromosome 18, clone RP24-303O20, c... 40 5.1
30emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 5.1 
>gb|AY341861.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-like protein (Cpl1)
            mRNA, complete cds; alternatively spliced
          Length = 1906

 Score =  763 bits (385), Expect = 0.0
 Identities = 385/385 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtccctctatgtgagtaaccaacaaactcttcctaacacctgctggaaaacctcagccat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 gtccctctatgtgagtaaccaacaaactcttcctaacacctgctggaaaacctcagccat 1640

                                                                        
Query: 61   tatccttttagttgccaaacctcttggcaattatgggtcggacgtcatcagcaacagcaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 tatccttttagttgccaaacctcttggcaattatgggtcggacgtcatcagcaacagcaa 1580

                                                                        
Query: 121  gtgtctccaggaatggaatcagctgagataatccctcatcaaaggggtcattataccagc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 gtgtctccaggaatggaatcagctgagataatccctcatcaaaggggtcattataccagc 1520

                                                                        
Query: 181  tctctatgggtataccattattcacttgcaactggaaaacctgcggagtgttgtcaatta 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 tctctatgggtataccattattcacttgcaactggaaaacctgcggagtgttgtcaatta 1460

                                                                        
Query: 241  tggcaacctttgcaaggtcaactccaataacagtcagatcttttgtgtagccactttccg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 tggcaacctttgcaaggtcaactccaataacagtcagatcttttgtgtagccactttccg 1400

                                                                        
Query: 301  taaatacacatgactcgcggaaaaaacgcttcgagaacaatgtgttctctggatcaagcc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 taaatacacatgactcgcggaaaaaacgcttcgagaacaatgtgttctctggatcaagcc 1340

                                     
Query: 361  tgtcaagcagctggtctgcataaac 385
            |||||||||||||||||||||||||
Sbjct: 1339 tgtcaagcagctggtctgcataaac 1315
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>gb|AY341862.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-like protein (Cpl1)
            gene, complete cds; alternatively spliced
          Length = 5591

 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtccctctatgtgagtaaccaacaaactcttcctaacacctgctggaaaacctcagccat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5406 gtccctctatgtgagtaaccaacaaactcttcctaacacctgctggaaaacctcagccat 5347

                                                                        
Query: 61   tatccttttagttgccaaacctcttggcaattatgggtcggacgtcatcagcaacagcaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5346 tatccttttagttgccaaacctcttggcaattatgggtcggacgtcatcagcaacagcaa 5287

                                                                        
Query: 121  gtgtctccaggaatggaatcagctgagataatccctcatcaaaggggtcattataccagc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5286 gtgtctccaggaatggaatcagctgagataatccctcatcaaaggggtcattataccagc 5227

                                                       
Query: 181  tctctatgggtataccattattcacttgcaactggaaaacctg 223
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5226 tctctatgggtataccattattcacttgcaactggaaaacctg 5184



 Score =  331 bits (167), Expect = 1e-87
 Identities = 167/167 (100%)
 Strand = Plus / Minus

                                                                        
Query: 219  acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 4944

                                                                        
Query: 279  tcttttgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaac 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 tcttttgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaac 4884

                                                           
Query: 339  aatgtgttctctggatcaagcctgtcaagcagctggtctgcataaac 385
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4883 aatgtgttctctggatcaagcctgtcaagcagctggtctgcataaac 4837
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>ref|NM_191905.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1632

 Score =  313 bits (158), Expect = 2e-82
 Identities = 297/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 103
            ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 1628 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 1570

                                                                        
Query: 104  gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 163
             ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 1569 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 1510

                                                                        
Query: 164  ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 223
            |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 1450

                                                                        
Query: 224  cggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatcttt 283
            ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||| ||
Sbjct: 1449 cggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcagatcctt 1390

                                                                        
Query: 284  tgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaacaatgt 343
             ||||||| | | |  ||||||||||||||||| |||||| ||||| | ||||||| | |
Sbjct: 1389 cgtgtagctagtgtttgtaaatacacatgactcccggaaataacgcctagagaacagttt 1330

                                                      
Query: 344  gttctctggatcaagcctgtcaagcagctggtctgcataaac 385
             ||||||||||| |   ||||||||||||| |||||||||||
Sbjct: 1329 tttctctggatccaagatgtcaagcagctgatctgcataaac 1288
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>dbj|AK071909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065H16, full
            insert sequence
          Length = 1852

 Score =  313 bits (158), Expect = 2e-82
 Identities = 297/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 103
            ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 1628 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 1570

                                                                        
Query: 104  gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 163
             ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 1569 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 1510

                                                                        
Query: 164  ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 223
            |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 1450

                                                                        
Query: 224  cggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatcttt 283
            ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||| ||
Sbjct: 1449 cggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcagatcctt 1390

                                                                        
Query: 284  tgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaacaatgt 343
             ||||||| | | |  ||||||||||||||||| |||||| ||||| | ||||||| | |
Sbjct: 1389 cgtgtagctagtgtttgtaaatacacatgactcccggaaataacgcctagagaacagttt 1330

                                                      
Query: 344  gttctctggatcaagcctgtcaagcagctggtctgcataaac 385
             ||||||||||| |   ||||||||||||| |||||||||||
Sbjct: 1329 tttctctggatccaagatgtcaagcagctgatctgcataaac 1288
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 6e-43
 Identities = 159/180 (88%), Gaps = 1/180 (0%)
 Strand = Plus / Plus

                                                                            
Query: 44       tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 103
                ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 27172186 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 27172244

                                                                            
Query: 104      gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 163
                 ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 27172245 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 27172304

                                                                            
Query: 164      ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 223
                |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27172305 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 27172364



 Score =  141 bits (71), Expect = 2e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                            
Query: 219      acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 278
                |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||
Sbjct: 27172550 acctgcggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcaga 27172609

                                                                            
Query: 279      tcttttgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaac 338
                || || ||||||| | | |  ||||||||||||||||| |||||| ||||| | ||||||
Sbjct: 27172610 tccttcgtgtagctagtgtttgtaaatacacatgactcccggaaataacgcctagagaac 27172669

                                                               
Query: 339      aatgtgttctctggatcaagcctgtcaagcagctggtctgcataaac 385
                | | | ||||||||||| |   ||||||||||||| |||||||||||
Sbjct: 27172670 agttttttctctggatccaagatgtcaagcagctgatctgcataaac 27172716



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                            
Query: 163      aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 222
                ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 25133867 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 25133808

                 
Query: 223      g 223
                |
Sbjct: 25133807 g 25133807



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                            
Query: 219      acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 278
                ||||| ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  ||||||
Sbjct: 25133533 acctgtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcaga 25133474

                             
Query: 279      tcttttgtgtagc 291
                || ||||| ||||
Sbjct: 25133473 tcctttgtatagc 25133461
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>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003E08
          Length = 135014

 Score =  182 bits (92), Expect = 6e-43
 Identities = 159/180 (88%), Gaps = 1/180 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 103
             ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 79864 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 79922

                                                                         
Query: 104   gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 163
              ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 79923 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 79982

                                                                         
Query: 164   ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 223
             |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79983 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 80042



 Score =  141 bits (71), Expect = 2e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                         
Query: 219   acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 278
             |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||
Sbjct: 80228 acctgcggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcaga 80287

                                                                         
Query: 279   tcttttgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaac 338
             || || ||||||| | | |  ||||||||||||||||| |||||| ||||| | ||||||
Sbjct: 80288 tccttcgtgtagctagtgtttgtaaatacacatgactcccggaaataacgcctagagaac 80347

                                                            
Query: 339   aatgtgttctctggatcaagcctgtcaagcagctggtctgcataaac 385
             | | | ||||||||||| |   ||||||||||||| |||||||||||
Sbjct: 80348 agttttttctctggatccaagatgtcaagcagctgatctgcataaac 80394
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>dbj|AK066990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093I20, full
            insert sequence
          Length = 3361

 Score =  182 bits (92), Expect = 6e-43
 Identities = 159/180 (88%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   tggaaaacctcagccattatccttttagttgccaaacctcttggcaattatgggtcggac 103
            ||||||| |||||| || |||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 3140 tggaaaatctcagcaat-atcctttttgtcgccaaacttcttggcaattatgggtcggac 3082

                                                                        
Query: 104  gtcatcagcaacagcaagtgtctccaggaatggaatcagctgagataatccctcatcaaa 163
             ||||| |||  |||||| ||||||||||| ||||||||||||| |||| |||||||| |
Sbjct: 3081 atcatccgcagaagcaagggtctccaggaacggaatcagctgaggtaatgcctcatcaga 3022

                                                                        
Query: 164  ggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacctg 223
            |  |||  || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 gtcgtcgctaaaccaactctctatgggtataccattattcacttgcaactggaaaacctg 2962



 Score =  141 bits (71), Expect = 2e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                        
Query: 219  acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 278
            |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||
Sbjct: 2776 acctgcggagtgttgtcaattatgacaactttagcaaggtcaactccaacaactgtcaga 2717

                                                                        
Query: 279  tcttttgtgtagccactttccgtaaatacacatgactcgcggaaaaaacgcttcgagaac 338
            || || ||||||| | | |  ||||||||||||||||| |||||| ||||| | ||||||
Sbjct: 2716 tccttcgtgtagctagtgtttgtaaatacacatgactcccggaaataacgcctagagaac 2657

                                                           
Query: 339  aatgtgttctctggatcaagcctgtcaagcagctggtctgcataaac 385
            | | | ||||||||||| |   ||||||||||||| |||||||||||
Sbjct: 2656 agttttttctctggatccaagatgtcaagcagctgatctgcataaac 2610
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>dbj|AK102504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E13, full
            insert sequence
          Length = 2366

 Score =  113 bits (57), Expect = 4e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 163  aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 222
            ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 2006 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 1947

                                                                        
Query: 223  gcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatctt 282
            | ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  |||||||| |
Sbjct: 1946 gtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcagatcct 1887

                     
Query: 283  ttgtgtagc 291
            |||| ||||
Sbjct: 1886 ttgtatagc 1878
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>dbj|AK063853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D02, full
           insert sequence
          Length = 514

 Score =  113 bits (57), Expect = 4e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                       
Query: 163 aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 222
           ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 150 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 91

                                                                       
Query: 223 gcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcagatctt 282
           | ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  |||||||| |
Sbjct: 90  gtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcagatcct 31

                    
Query: 283 ttgtgtagc 291
           |||| ||||
Sbjct: 30  ttgtatagc 22
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>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0688A04
          Length = 143969

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                          
Query: 163    aggggtcattataccagctctctatgggtataccattattcacttgcaactggaaaacct 222
              ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||||||||
Sbjct: 133475 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactggaaaacct 133416

               
Query: 223    g 223
              |
Sbjct: 133415 g 133415



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                          
Query: 219    acctgcggagtgttgtcaattatggcaacctttgcaaggtcaactccaataacagtcaga 278
              ||||| ||||| ||||||| |||  |||| ||||| ||||||||||||| ||  ||||||
Sbjct: 133141 acctgtggagtattgtcaactattacaacttttgccaggtcaactccaagaattgtcaga 133082

                           
Query: 279    tcttttgtgtagc 291
              || ||||| ||||
Sbjct: 133081 tcctttgtatagc 133069
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>gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete sequence
          Length = 102057

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 175   accagctctctatgggtataccattattcacttgcaactggaaaacctg 223
             |||| |||| |||||| ||||||||||||||||||||  ||||||||||
Sbjct: 76735 accaactctttatggggataccattattcacttgcaaacggaaaacctg 76783
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>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382,
             complete sequence
          Length = 99748

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 175   accagctctctatgggtataccattattcacttgcaactggaaaacctg 223
             |||| |||| |||||| ||||||||||||||||||||  ||||||||||
Sbjct: 88352 accaactctttatgggaataccattattcacttgcaaacggaaaacctg 88400
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>ref|NM_192920.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 163 aggggtcattataccagctctctatgggtataccattattcacttgcaactg 214
           ||||||||| | ||||||||| ||| ||||||||||| | ||||||||||||
Sbjct: 865 aggggtcatcaaaccagctctttattggtataccattgtccacttgcaactg 814
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>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
             complete sequence
          Length = 204649

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 96    ggtcggacgtcatcagcaacagcaa 120
             |||||||||||||| ||||||||||
Sbjct: 41355 ggtcggacgtcatctgcaacagcaa 41331
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>ref|NM_018416.2| Homo sapiens forkhead box J2 (FOXJ2), mRNA
          Length = 5499

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   gccaaacctcttggcaattatgggt 98
            |||||||||||||| ||||||||||
Sbjct: 4433 gccaaacctcttggaaattatgggt 4409
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>emb|AL161978.1|HSM802572 Homo sapiens mRNA; cDNA DKFZp762A1712 (from clone DKFZp762A1712)
          Length = 3019

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   gccaaacctcttggcaattatgggt 98
            |||||||||||||| ||||||||||
Sbjct: 1976 gccaaacctcttggaaattatgggt 1952
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>emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chromosome 11 Contains the
             Flcn gene for folliculin, the gene for a novel
             Phospholipase D Active site motif-containing protein, two
             novel genes, the gene for Rho interacting protein 3
             (Rhoip3), the gene (possible pseudogene) for a novel
             protein similar to olfactory receptor proteins and two CpG
             islands, complete sequence
          Length = 205606

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   aatggaatcagctgagataat 152
             |||||||||||||||||||||
Sbjct: 90120 aatggaatcagctgagataat 90140
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>dbj|AK092529.1| Homo sapiens cDNA FLJ35210 fis, clone PROST1000085
          Length = 2402

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   gccaaacctcttggcaattatgggt 98
            |||||||||||||| ||||||||||
Sbjct: 1374 gccaaacctcttggaaattatgggt 1350
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>dbj|AK085445.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630027A16 product:unclassifiable, full
            insert sequence
          Length = 1626

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 132  aatggaatcagctgagataat 152
            |||||||||||||||||||||
Sbjct: 1325 aatggaatcagctgagataat 1305
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 96       ggtcggacgtcatcagcaacagcaa 120
                |||||||||||||| ||||||||||
Sbjct: 27961190 ggtcggacgtcatctgcaacagcaa 27961166
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>gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell Park Cancer Institute Mouse
             BAC Library) complete sequence
          Length = 147670

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   aatggaatcagctgagataat 152
             |||||||||||||||||||||
Sbjct: 87212 aatggaatcagctgagataat 87192
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>gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186321

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 74    gccaaacctcttggcaattatgggt 98
             |||||||||||||| ||||||||||
Sbjct: 75946 gccaaacctcttggaaattatgggt 75970
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>gb|AF155132.1|AF155132 Homo sapiens FOXJ2 forkhead factor mRNA, complete cds
          Length = 4873

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   gccaaacctcttggcaattatgggt 98
            |||||||||||||| ||||||||||
Sbjct: 3838 gccaaacctcttggaaattatgggt 3814
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>dbj|AK099836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106J19, full
            insert sequence
          Length = 1584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 96   ggtcggacgtcatcagcaacagcaa 120
            |||||||||||||| ||||||||||
Sbjct: 1283 ggtcggacgtcatctgcaacagcaa 1259



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                        
Query: 180  ctctctatgggtataccattattcacttgcaactggaaaacctgcggagtgttgtcaatt 239
            |||||||| ||||||||||| | | | || | | |||||||||  ||||  ||||| |||
Sbjct: 1199 ctctctataggtataccattttcctcctgtagccggaaaacctctggagaattgtcgatt 1140

                                                     
Query: 240  atggcaacctttgcaaggtcaactccaataacagtcagatc 280
            ||  |||||||||| || ||| |  ||||||||||||||||
Sbjct: 1139 atcacaacctttgcgagatcagcaacaataacagtcagatc 1099
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>gb|AF038177.1|AF038177 Homo sapiens clone 23899 mRNA sequence
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 74 gccaaacctcttggcaattatgggt 98
          |||||||||||||| ||||||||||
Sbjct: 77 gccaaacctcttggaaattatgggt 53
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>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete
             sequence
          Length = 113420

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aagtgtctccaggaatggaa 138
             ||||||||||||||||||||
Sbjct: 34363 aagtgtctccaggaatggaa 34344
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>emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, complete sequence
          Length = 84546

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ttttagttgccaaacctctt 85
             ||||||||||||||||||||
Sbjct: 61898 ttttagttgccaaacctctt 61879
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>emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in linkage group 3,
              complete sequence
          Length = 244555

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     ttttagttgccaaacctctt 85
              ||||||||||||||||||||
Sbjct: 206014 ttttagttgccaaacctctt 205995
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>gb|AC105957.13| Mus musculus chromosome 18, clone RP24-303O20, complete sequence
          Length = 167570

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tccttttagttgccaaacct 82
             ||||||||||||||||||||
Sbjct: 23464 tccttttagttgccaaacct 23483
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     agcaacagcaagtgtctcca 129
               ||||||||||||||||||||
Sbjct: 2493591 agcaacagcaagtgtctcca 2493610


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,194,113
Number of Sequences: 3902068
Number of extensions: 3194113
Number of successful extensions: 78024
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77928
Number of HSP's gapped (non-prelim): 90
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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