ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3p19 |
|---|---|
| Clone Library Name | barley_pub |
>PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 174 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -1 Query: 203 RW-ICWFQFQAVDVTYSLFAXICLFVMRVCSIXLCMR 96 RW +CW F+A+ +T S+ L + VC C R Sbjct: 84 RWGVCWVNFEALIITMSVLGGSVLLGITVCCCYCCRR 120
>UDB31_CANFA (Q6K1J1) UDP-glucuronosyltransferase 2B31 precursor (EC 2.4.1.17)| (UDPGT) Length = 530 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = -1 Query: 221 HARPLVRWICWFQFQAVDVTYSLFAXI--CLFVMRVCSIXLCMR 96 H RP + WFQ+ ++DV L A + +FV C + C + Sbjct: 476 HLRPASHDLTWFQYHSLDVIGFLLACVATAIFVTTQCCLFCCRK 519
>PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 174 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -1 Query: 203 RW-ICWFQFQAVDVTYSLFAXICLFVMRVCSIXLCMR 96 RW +CW F+A+ +T S+ L + VC C R Sbjct: 84 RWGVCWVNFEALIITMSVLGGSVLLGITVCCCCCCRR 120
>PTTG_PONPY (Q5NVI6) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 180 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -1 Query: 203 RW-ICWFQFQAVDVTYSLFAXICLFVMRVCSIXLCMR 96 RW +CW F+A+ +T S+ L + +C C R Sbjct: 87 RWGVCWVNFEALIITMSVVGGTLLLGIAICCCCCCRR 123
>PTTG_HUMAN (P53801) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 180 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -1 Query: 203 RW-ICWFQFQAVDVTYSLFAXICLFVMRVCSIXLCMR 96 RW +CW F+A+ +T S+ L + +C C R Sbjct: 87 RWGVCWVNFEALIITMSVVGGTLLLGIAICCCCCCRR 123
>GLMU_XYLFA (Q9PE88) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 457 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +1 Query: 253 QALLPDALHIILGLFALSLPVLLHLA-EARVAFKDNTTVNW 372 QAL PDA+H++ G H + R AF D T ++W Sbjct: 45 QALTPDAIHVVYG----------HAGNQVRAAFADQTDLHW 75
>UDB9_MACFA (O02663) UDP-glucuronosyltransferase 2B9 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 221 HARPLVRWICWFQFQAVDVTYSLFAXIC--LFVMRVCSI 111 H RP + WFQ+ ++DV L A + +FV+ C + Sbjct: 475 HLRPAAHDLTWFQYHSLDVIGFLLACVATVIFVIMKCCL 513
>ENPP1_RAT (Q924C3) Ectonucleotide pyrophosphatase/phosphodiesterase 1 (E-NPP| 1) (Phosphodiesterase I/nucleotide pyrophosphatase 1) (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase ( Length = 906 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 366 DCCVVFEGHSCLCKMKKNWKAQGKKAQDNVQCVRE 262 DCC+ +S +C+ KK+W + + D QC E Sbjct: 157 DCCI---NYSSVCQEKKSWVEEACETIDAPQCPAE 188
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = -3 Query: 363 CCVVFEGHSCLCKMKKNWKAQGKKAQDNVQC 271 C + G+ CLC ++ A +K QD+ +C Sbjct: 1494 CSNIVPGYICLCNPGYHYDASSRKCQDHNEC 1524
>UDB33_MACMU (Q9GLD9) UDP-glucuronosyltransferase 2B33 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 221 HARPLVRWICWFQFQAVDVTYSLFAXIC--LFVMRVCSI 111 H RP + WFQ+ ++DV L A + +F++ C + Sbjct: 475 HLRPAAHDLTWFQYHSLDVIGFLLACVATVIFIIMKCCL 513
>UDB18_MACFA (O97951) UDP-glucuronosyltransferase 2B18 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 221 HARPLVRWICWFQFQAVDVTYSLFAXIC--LFVMRVCSI 111 H RP + WFQ+ ++DV L A + +F++ C + Sbjct: 475 HLRPAAHDLTWFQYHSLDVIGFLLACVATVIFIIMKCCL 513
>GNRR2_HUMAN (Q96P88) Gonadotropin-releasing hormone II receptor (Type II GnRH| receptor) (GnRH-II-R) Length = 379 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -1 Query: 188 FQFQAVDVTYSLFAXICLFVMRVCSIXLC 102 F+ Q + TY+LF CLF++ + ++ +C Sbjct: 194 FKAQWQETTYNLFTFCCLFLLPLTAMAIC 222
>UDB4_HUMAN (P06133) UDP-glucuronosyltransferase 2B4 precursor (EC 2.4.1.17)| (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) Length = 528 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/41 (26%), Positives = 19/41 (46%) Frame = -1 Query: 221 HARPLVRWICWFQFQAVDVTYSLFAXICLFVMRVCSIXLCM 99 H R + WFQ+ ++DVT L A + + + C+ Sbjct: 475 HLRVAAHDLTWFQYHSLDVTGFLLACVATVIFIITKCLFCV 515
>TRY2_XENLA (P70059) Trypsin precursor (EC 3.4.21.4)| Length = 244 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = -3 Query: 396 ISGNVSKVPVDCCVVFEGHSCLCKMKKNWKAQGKKAQDNVQCVREQGLLVSAC 238 +S N+ VP+ G +CL N + G D +QC+ L S C Sbjct: 117 LSANIQSVPLPSACASAGTNCLISGWGNTLSSGTNYPDLLQCLNAPILTDSQC 169
>Y603_ENCCU (Q8STJ4) Hypothetical protein ECU06_0030/ECU06_1690/ECU11_0020| Length = 248 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 208 RGLACTKXLSARTH*QALLPDALHIILGLFALSLP-VLLHLAEARVAFKDNTTVNWN 375 + L+ TK S TH +LPD +H IL +++ E + +TT+ W+ Sbjct: 61 QNLSTTKATSPSTHQSPILPDDIHSILPFAHMNITHTTGQHTENSIRAPSSTTILWH 117
>GLMU_XYLFT (Q87E93) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 457 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +1 Query: 253 QALLPDALHIILGLFALSLPVLLHLA-EARVAFKDNTTVNW 372 +AL PDA+H++ G H + R AF D T ++W Sbjct: 45 RALTPDAIHVVYG----------HAGNQVRAAFADQTDLHW 75
>UDB23_MACFA (Q9TSL6) UDP-glucuronosyltransferase 2B23 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 221 HARPLVRWICWFQFQAVDVTYSLFAXIC--LFVMRVCSI 111 H RP + WFQ+ + DV L A + +F++ C + Sbjct: 475 HLRPAAHDLTWFQYHSFDVIGFLLACVATVIFIIMKCCL 513
>AMIE_HELPY (O25067) Aliphatic amidase (EC 3.5.1.4) (Acylamide amidohydrolase)| Length = 339 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 336 CLCKMKKNWKAQGKKAQDNVQCVREQGLLVSAC 238 C + K W KKAQ+NV+ + + V+AC Sbjct: 299 CPFEFYKTWVNDPKKAQENVEKITRPSVGVAAC 331 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,758,123 Number of Sequences: 219361 Number of extensions: 793110 Number of successful extensions: 1646 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1629 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1646 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
