ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3p16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 tatatagacaaatctaagacaagaattttggaatggaaggagtac 45 ||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 46676 tatatagacaaatttaagacaagaattttgggacggaaggagtac 46720 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagta 44 ||||||| |||||||||||||||||||| ||| |||||| Sbjct: 46631 tagacaatgctaagacaagaattttggaacggagggagta 46592
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 tatatagacaaatctaagacaagaattttggaatggaaggagta 44 ||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 30500 tatatagacaaatctaagacaagaattttgggacggagggagta 30457
>gb|DQ019631.1| Triticum aestivum alternative splicing regulator (Tra2) mRNA, complete cds Length = 1050 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 476 ctgtctctgtccctccttccggccggggacctcgagcggtccctcgacgacctgct 531 ||||| ||||||||||| ||||||| ||||| || |||||||||||||||||||| Sbjct: 859 ctgtccctgtccctcctcgcggccggcgaccttgaccggtccctcgacgacctgct 804 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 441 ttcagtcgcgcttcctgtccctgct 465 ||||||||||||||||||||||||| Sbjct: 882 ttcagtcgcgcttcctgtccctgct 858
>gb|AY821733.1| Triticum monococcum beta amylase gene, partial cds Length = 1489 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagtacat 47 ||||||||||||||||||||||||||| | ||| ||||||||| Sbjct: 578 tagacaaatctaagacaagaattttgggacggagggagtacat 620 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 9 caaatctaagacaagaattttggaa 33 ||||||||||||||||||||||||| Sbjct: 526 caaatctaagacaagaattttggaa 502
>gb|AY821732.1| Triticum baeoticum beta amylase gene, partial cds Length = 1536 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagtacat 47 ||||||||||||||||||||||||||| | ||| ||||||||| Sbjct: 627 tagacaaatctaagacaagaattttgggacggagggagtacat 669 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 9 caaatctaagacaagaattttggaa 33 ||||||||||||||||||||||||| Sbjct: 575 caaatctaagacaagaattttggaa 551
>gb|DQ175991.1| Hordeum vulgare subsp. vulgare clone 65-21A-RB flanking T-DNA insertion sequence Length = 325 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 9 caaatctaagacaagaattttggaatggaaggagta 44 ||||||||||||||||||||| ||||||| |||||| Sbjct: 272 caaatctaagacaagaattttagaatggagggagta 237
>emb|X73528.1|TAPHOK T.aestivum gene for phosphoglycerate kinase Length = 3557 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 6 agacaaatctaagacaagaattttggaa 33 |||||||||||||||||||||||||||| Sbjct: 239 agacaaatctaagacaagaattttggaa 266 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 ||||||||||||||||||||||||| Sbjct: 224 tagacaaatctaagacaagaatttt 200
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaattttgg 31 ||||||||||||||||||||||||||| Sbjct: 7294 tagacaaatctaagacaagaattttgg 7268 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagta 44 ||||||| ||||||||||||||||||| | ||| |||||| Sbjct: 7342 tagacaattctaagacaagaattttgggacggagggagta 7381
>dbj|BS000240.1| Pan troglodytes chromosome 22 clone:RP43-055A16, map 22, complete sequences Length = 185079 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||||||||||||||||||||||||| Sbjct: 98384 ctatttctgtctctgtctctgtccct 98359 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 98227 tttctgtctctgtctctgtc 98208
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||||||||||||||||||||||||| Sbjct: 2990 ctatttctgtctctgtctctgtccct 2965 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 2813 tttctgtctctgtctctgtc 2794
>emb|AJ011932.1|HSQ4H9 Homo sapiens chromosome 21q22.3, cosmid clone Q4H9 complete sequence bases 1..41604 Length = 41604 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||||||||||||||||||||||||| Sbjct: 31532 ctatttctgtctctgtctctgtccct 31507 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 31355 tttctgtctctgtctctgtc 31336
>gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosome 9, complete sequence Length = 149442 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctccttccg 496 |||||||||||||||||| ||||||||| Sbjct: 7091 tctgtctctgtctctgtctctccttccg 7064
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtccctccttc 494 |||||||||||||||||||| ||||||| Sbjct: 62806 tttctgtctctgtctctgtctctccttc 62779
>emb|AJ704455.1| Hordeum vulgare partial eIF(iso)4E gene for putative eukaryotic translation initiation factor (iso)4E, exons 3-5, line OWB-D Length = 1412 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagta 44 ||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 509 tagacaaatgtaagacaagaattttgggacggagggagta 470 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 15 taagacaagaattttggaatggaaggagtacat 47 ||||||||||||||||| | ||| ||||||||| Sbjct: 568 taagacaagaattttgggacggagggagtacat 600
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtccctc 490 |||||||||||||||||||||||| Sbjct: 17440 tttctgtctctgtctctgtccctc 17417
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagta 44 |||||||||||| |||||||||||||| | ||| |||||| Sbjct: 1099 tagacaaatctatgacaagaattttgggacggagggagta 1060 Score = 44.1 bits (22), Expect = 0.46 Identities = 33/37 (89%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttggaatggaaggagta 44 ||||||||||||| |||||||||| | ||| |||||| Sbjct: 1150 acaaatctaagacnagaattttgggacggagggagta 1186
>gb|AC101658.8| Mus musculus chromosome 7, clone RP23-470G18, complete sequence Length = 185449 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtccctccttc 494 |||||||||||||||||||| ||||||| Sbjct: 165281 tttctgtctctgtctctgtctctccttc 165254
>gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosome 13, complete sequence Length = 223662 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcct 492 |||||||||||||||||||||||| Sbjct: 62178 tctgtctctgtctctgtccctcct 62201
>gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, complete sequence Length = 174388 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 467 tttctgtctctgtctctgtccctc 490 |||||||||||||||||||||||| Sbjct: 29088 tttctgtctctgtctctgtccctc 29111
>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence Length = 166132 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctccttccg 496 |||||||||||||||||| ||||||||| Sbjct: 150107 tctgtctctgtctctgtctctccttccg 150080
>gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, complete sequence Length = 184609 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 467 tttctgtctctgtctctgtccctc 490 |||||||||||||||||||||||| Sbjct: 133154 tttctgtctctgtctctgtccctc 133177
>gb|AC102735.9| Mus musculus chromosome 5, clone RP24-237I4, complete sequence Length = 167871 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 146959 tctgtctctgtctctgtccctcc 146937
>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence Length = 205525 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 8251 tctgtctctgtctctgtccctcc 8229
>gb|AC165964.3| Mus musculus BAC clone RP23-334H24 from chromosome 8, complete sequence Length = 233538 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctccttcc 495 ||||||||||||||| ||||||||||| Sbjct: 101935 tctgtctctgtctctctccctccttcc 101909
>gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosome 13, complete sequence Length = 185965 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 103344 ctatctctgtctctgtctctgtccctc 103370
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 11536 tctgtctctgtctctgtccctcc 11514 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 11550 tttctgtctctgtctctgtc 11531
>gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, complete sequence Length = 193588 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctccttcc 495 |||||||||||||||||| |||||||| Sbjct: 148988 tctgtctctgtctctgtctctccttcc 148962
>gb|AC158141.8| Mus musculus chromosome 5, clone RP23-281M20, complete sequence Length = 220396 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 219751 tctgtctctgtctctgtccctcc 219773
>gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, complete sequence Length = 204025 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 11659 tctgtctctgtctctgtccctcc 11637
>gb|AC166112.2| Mus musculus BAC clone RP23-63L7 from chromosome 9, complete sequence Length = 243289 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtc 486 ||||||||||||||||||||||| Sbjct: 167686 ctatttctgtctctgtctctgtc 167708 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtc 486 ||||||||||||||||||||||| Sbjct: 103858 ctatttctgtctctgtctctgtc 103836
>gb|AC159249.3| Mus musculus BAC clone RP24-177C7 from chromosome y, complete sequence Length = 146406 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 34119 ctatctctgtctctgtctctgtccctc 34145
>gb|AC167019.4| Mus musculus BAC clone RP23-262K24 from chromosome 15, complete sequence Length = 207785 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctccttcc 495 ||||||||||||||| ||||||||||| Sbjct: 25726 tctgtctctgtctctttccctccttcc 25752
>gb|AC168049.2| Mus musculus BAC clone RP23-246L6 from chromosome 10, complete sequence Length = 229657 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 11463 tctgtctctgtctctgtccctcc 11485
>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence Length = 174202 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtc 486 ||||||||||||||||||||||| Sbjct: 170560 ctatttctgtctctgtctctgtc 170582
>gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, complete sequence Length = 140039 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 1081 tctgtctctgtctctgtccctcc 1103
>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence Length = 173306 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 30805 tctgtctctgtctctgtccctcc 30783
>gb|AC132276.4| Mus musculus BAC clone RP24-344B8 from chromosome Y, complete sequence Length = 168601 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 47840 ctatctctgtctctgtctctgtccctc 47814
>gb|AC145562.5| Mus musculus BAC clone RP24-67L21 from chromosome Y, complete sequence Length = 156048 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 109968 ctatctctgtctctgtctctgtccctc 109994 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 32966 ctatctctgtctctgtctctgtccctc 32992
>gb|AC147268.5| Mus musculus BAC clone RP24-263J19 from chromosome Y, complete sequence Length = 129831 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 66344 ctatctctgtctctgtctctgtccctc 66318
>gb|AC145598.5| Mus musculus BAC clone RP24-324I11 from chromosome Y, complete sequence Length = 225035 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 33809 ctatctctgtctctgtctctgtccctc 33835
>gb|AC147996.3| Mus musculus BAC clone RP24-253L14 from chromosome Y, complete sequence Length = 149579 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 145702 ctatctctgtctctgtctctgtccctc 145728
>gb|AC147109.2| Mus musculus BAC clone RP24-75P8 from chromosome Y, complete sequence Length = 216878 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 145105 ctatctctgtctctgtctctgtccctc 145131
>gb|AC147107.2| Mus musculus BAC clone RP24-69F17 from chromosome Y, complete sequence Length = 202338 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 68832 ctatctctgtctctgtctctgtccctc 68806
>gb|AC147252.4| Mus musculus BAC clone RP24-116A5 from chromosome Y, complete sequence Length = 197602 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 51621 ctatctctgtctctgtctctgtccctc 51595
>gb|AC147372.3| Mus musculus BAC clone RP24-212L10 from chromosome Y, complete sequence Length = 187032 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 38459 ctatctctgtctctgtctctgtccctc 38433
>gb|AC140239.3| Mus musculus BAC clone RP24-280O4 from chromosome Y, complete sequence Length = 156577 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 17758 ctatctctgtctctgtctctgtccctc 17732
>gb|AC147149.2| Mus musculus BAC clone RP24-248P15 from chromosome Y, complete sequence Length = 144382 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 132680 ctatctctgtctctgtctctgtccctc 132706
>gb|AC144934.3| Mus musculus BAC clone RP24-327C7 from chromosome Y, complete sequence Length = 194335 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 191075 ctatctctgtctctgtctctgtccctc 191049
>gb|AC147150.2| Mus musculus BAC clone RP24-386L15 from chromosome Y, complete sequence Length = 171912 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 23547 ctatctctgtctctgtctctgtccctc 23521
>gb|AC132254.3| Mus musculus BAC clone RP24-469M1 from chromosome Y, complete sequence Length = 163018 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 115013 ctatctctgtctctgtctctgtccctc 115039 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 101034 tctgtctctgtctctgtccctcc 101056 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 19848 ctatctctgtctctgtctctgtccctc 19874
>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete sequence Length = 178936 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 41274 tctgtctctgtctctgtccctcc 41296
>gb|AC129289.4| Mus musculus BAC clone RP24-482E11 from chromosome Y, complete sequence Length = 181755 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 181334 ctatctctgtctctgtctctgtccctc 181308
>gb|AC140223.3| Mus musculus BAC clone RP24-477G22 from chromosome Y, complete sequence Length = 189728 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 166513 tctgtctctgtctctgtccctcc 166491 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 152534 ctatctctgtctctgtctctgtccctc 152508
>gb|AC175743.2| Mus musculus BAC clone RP24-44F3 from chromosome y, complete sequence Length = 176317 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 74010 tctgtctctgtctctgtccctcc 73988
>gb|AC183415.1| Mus musculus BAC clone RP24-121M4 from chromosome y, complete sequence Length = 188947 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 42817 ctatctctgtctctgtctctgtccctc 42791
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctccttcc 495 ||||||||||||||| ||||||||||| Sbjct: 120528 tctgtctctgtctctttccctccttcc 120554
>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence Length = 205869 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 202898 ctatctctgtctctgtctctgtccctc 202872
>gb|AC132283.4| Mus musculus BAC clone RP24-351L16 from chromosome Y, complete sequence Length = 165828 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 109672 ctatctctgtctctgtctctgtccctc 109698
>gb|AC144647.3| Mus musculus BAC clone RP24-369F17 from chromosome Y, complete sequence Length = 199733 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 174688 ctatctctgtctctgtctctgtccctc 174662
>gb|AC139297.4| Mus musculus BAC clone RP24-62H18 from chromosome Y, complete sequence Length = 206783 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 146392 ctatctctgtctctgtctctgtccctc 146418
>gb|AC134579.5| Mus musculus BAC clone RP24-82I10 from chromosome Y, complete sequence Length = 233924 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 226439 ctatctctgtctctgtctctgtccctc 226465
>gb|AC129191.4| Mus musculus BAC clone RP24-81F10 from chromosome Y, complete sequence Length = 241616 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 94629 ctatctctgtctctgtctctgtccctc 94603
>gb|AC145292.2| Mus musculus BAC clone RP24-84H20 from chromosome Y, complete sequence Length = 203944 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 178918 ctatctctgtctctgtctctgtccctc 178892
>gb|AC147113.2| Mus musculus BAC clone RP24-120I13 from chromosome Y, complete sequence Length = 196099 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 46304 ctatctctgtctctgtctctgtccctc 46278
>gb|AC140493.3| Mus musculus BAC clone RP24-137I9 from chromosome Y, complete sequence Length = 150186 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 84522 ctatctctgtctctgtctctgtccctc 84548
>gb|AC134567.4| Mus musculus BAC clone RP24-199C24 from chromosome Y, complete sequence Length = 163892 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 111103 ctatctctgtctctgtctctgtccctc 111129
>gb|AC136452.4| Mus musculus BAC clone RP24-274L23 from chromosome Y, complete sequence Length = 155057 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 94944 ctatctctgtctctgtctctgtccctc 94970
>gb|AC140473.3| Mus musculus BAC clone RP24-405H7 from chromosome Y, complete sequence Length = 133519 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 88689 ctatctctgtctctgtctctgtccctc 88715
>gb|AC136975.2| Mus musculus BAC clone RP24-403M20 from chromosome Y, complete sequence Length = 189490 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 133866 ctatctctgtctctgtctctgtccctc 133840
>gb|AC147142.2| Mus musculus BAC clone RP24-391G7 from chromosome Y, complete sequence Length = 162132 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 148216 ctatctctgtctctgtctctgtccctc 148242
>gb|AC136638.4| Mus musculus BAC clone RP24-369F2 from chromosome Y, complete sequence Length = 165290 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 163639 ctatctctgtctctgtctctgtccctc 163665
>gb|AC133082.3| Mus musculus BAC clone RP24-298C1 from chromosome Y, complete sequence Length = 152853 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 2622 ctatctctgtctctgtctctgtccctc 2648
>gb|AC144851.3| Mus musculus BAC clone RP24-329H15 from chromosome Y, complete sequence Length = 171646 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 16600 ctatctctgtctctgtctctgtccctc 16626
>gb|AC147156.2| Mus musculus BAC clone RP24-343M19 from chromosome Y, complete sequence Length = 214399 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 148382 ctatctctgtctctgtctctgtccctc 148408
>gb|AC123550.5| Mus musculus BAC clone RP24-289C13 from chromosome 7, complete sequence Length = 169206 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 31598 tctgtctctgtctctgtccctcc 31620
>gb|AC125138.4| Mus musculus BAC clone RP24-324N8 from chromosome 5, complete sequence Length = 171978 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 128862 tctgtctctgtctctgtccctcc 128840
>gb|AC114826.6| Mus musculus BAC clone RP24-156O12 from chromosome 5, complete sequence Length = 179886 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 89965 tctgtctctgtctctgtccctcc 89943
>gb|AC121930.3| Mus musculus BAC clone RP24-205C1 from chromosome 15, complete sequence Length = 148390 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 467 tttctgtctctgtctctgtccct 489 ||||||||||||||||||||||| Sbjct: 32631 tttctgtctctgtctctgtccct 32653
>emb|CR925759.7| Wallaby DNA sequence from clone MEKBa-346C2, complete sequence Length = 146757 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 115417 tctgtctctgtctctgtccctcc 115439
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtc 486 ||||||||||||||||||||||| Sbjct: 97479 ctatttctgtctctgtctctgtc 97457
>gb|AC127789.4| Rattus norvegicus 1 BAC CH230-15M17 (Children's Hospital Oakland Research Institute) complete sequence Length = 240825 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctccttcc 495 ||||||||||||||| ||||||||||| Sbjct: 232503 tctgtctctgtctctctccctccttcc 232477
>gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, complete sequence Length = 130226 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 105187 tctgtctctgtctctgtccctcc 105209
>gb|AC182483.3| Mus musculus BAC clone RP24-458L18 from chromosome y, complete sequence Length = 132653 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 76831 ctatctctgtctctgtctctgtccctc 76805
>emb|AL662876.23| Mouse DNA sequence from clone RP23-288K19 on chromosome 11 Contains the 5' end of a novel gene, a pseudogene similar to human polymerase (RNA) II (DNA directed) polypeptide D POLR2D, two novel genes, the Xbp1 gene for X-box binding protein 1, the gene for a novel ankyrin repeat containing protein and three CpG islands, complete sequence Length = 232225 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 ttctgtctctgtctctgtccctc 490 ||||||||||||||||||||||| Sbjct: 75925 ttctgtctctgtctctgtccctc 75903
>gb|AC184108.1| Mus musculus chromosome UNK clone CH26-73N11, complete sequence Length = 204663 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 137 ctatctctgtctctgtctctgtccctc 163
>gb|AC181981.2| Mus musculus BAC clone RP24-56E16 from chromosome y, complete sequence Length = 212637 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 82413 ctatctctgtctctgtctctgtccctc 82387
>gb|AC142261.5| Mus musculus BAC clone RP24-469C3 from chromosome unknown, complete sequence Length = 179858 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 38395 ctatctctgtctctgtctctgtccctc 38421
>gb|AC177805.2| Mus musculus BAC clone RP24-82J12 from chromosome y, complete sequence Length = 205800 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 61182 ctatctctgtctctgtctctgtccctc 61208
>gb|AC175387.3| Mus musculus BAC clone RP24-166B21 from chromosome y, complete sequence Length = 163736 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 141546 ctatctctgtctctgtctctgtccctc 141520
>gb|AC182449.4| Mus musculus BAC clone RP24-361G20 from chromosome y, complete sequence Length = 156599 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 89305 ctatctctgtctctgtctctgtccctc 89331
>gb|AC182038.2| Mus musculus BAC clone RP24-95H15 from chromosome y, complete sequence Length = 183498 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 21519 ctatctctgtctctgtctctgtccctc 21545
>gb|AC173705.5| Mus musculus BAC clone RP24-244N11 from chromosome y, complete sequence Length = 157985 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 48107 ctatctctgtctctgtctctgtccctc 48133
>gb|AC181982.2| Mus musculus BAC clone RP24-36K1 from chromosome y, complete sequence Length = 209549 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 205837 ctatctctgtctctgtctctgtccctc 205811 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 132281 ctatctctgtctctgtctctgtccctc 132255
>gb|AC177798.3| Mus musculus BAC clone RP24-456H11 from chromosome y, complete sequence Length = 171533 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 76736 ctatctctgtctctgtctctgtccctc 76762
>gb|AC181978.2| Mus musculus BAC clone RP24-394P22 from chromosome y, complete sequence Length = 165800 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 161451 ctatctctgtctctgtctctgtccctc 161425
>gb|AC182426.3| Mus musculus BAC clone RP24-81E19 from chromosome y, complete sequence Length = 219905 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 85317 ctatctctgtctctgtctctgtccctc 85291
>gb|AC175671.2| Mus musculus BAC clone RP24-313O14 from chromosome y, complete sequence Length = 176687 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 119728 ctatctctgtctctgtctctgtccctc 119754
>gb|AC177800.3| Mus musculus BAC clone RP24-323K10 from chromosome y, complete sequence Length = 168735 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 71348 ctatctctgtctctgtctctgtccctc 71322
>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete sequence Length = 155247 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 82636 ctatatctgtctctgtctctgtccctc 82662
>gb|AC183416.2| Mus musculus BAC clone RP24-68E17 from chromosome y, complete sequence Length = 177325 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 145969 ctatctctgtctctgtctctgtccctc 145943 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 8795 ctatctctgtctctgtctctgtccctc 8769 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccct 489 ||||||||||||||||||||| Sbjct: 141274 tctgtctctgtctctgtccct 141294
>gb|AC175491.3| Mus musculus BAC clone RP24-90O21 from chromosome y, complete sequence Length = 202657 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 68975 ctatctctgtctctgtctctgtccctc 69001
>gb|AC177799.3| Mus musculus BAC clone RP24-374O22 from chromosome y, complete sequence Length = 128487 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 35892 ctatctctgtctctgtctctgtccctc 35866
>gb|AC175120.3| Mus musculus BAC clone RP24-26J9 from chromosome y, complete sequence Length = 212433 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 146101 ctatctctgtctctgtctctgtccctc 146127
>dbj|AK156549.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830029F03 product:hypothetical protein, full insert sequence Length = 2305 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 1003 tctgtctctgtctctgtccctcc 981 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 1035 tttctgtctctgtctctgtc 1016
>gb|AC182254.2| Mus musculus BAC clone RP24-66O22 from chromosome y, complete sequence Length = 175381 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 120442 ctatctctgtctctgtctctgtccctc 120468
>gb|AC173998.3| Mus musculus BAC clone RP24-446E18 from chromosome y, complete sequence Length = 142829 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 8565 ctatctctgtctctgtctctgtccctc 8539
>gb|AC147606.2| Mus musculus BAC clone RP24-359I4 from chromosome y, complete sequence Length = 154511 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 2738 ctatctctgtctctgtctctgtccctc 2712
>gb|AC175462.3| Mus musculus BAC clone RP24-24E12 from chromosome y, complete sequence Length = 202215 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 146201 ctatctctgtctctgtctctgtccctc 146175
>gb|AC174475.4| Mus musculus BAC clone RP24-169K6 from chromosome y, complete sequence Length = 199928 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 49416 ctatctctgtctctgtctctgtccctc 49442
>gb|AC156035.5| Mus musculus BAC clone RP23-302M20 from chromosome 12, complete sequence Length = 187168 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctccttcc 495 ||||||||||||||| ||||||||||| Sbjct: 92121 tctgtctctgtctctctccctccttcc 92095
>gb|AC147264.5| Mus musculus BAC clone RP24-225P12 from chromosome y, complete sequence Length = 178650 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 32516 ctatctctgtctctgtctctgtccctc 32490
>gb|AC175662.3| Mus musculus BAC clone RP24-425D4 from chromosome y, complete sequence Length = 188505 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 71298 ctatctctgtctctgtctctgtccctc 71272
>gb|AC175391.3| Mus musculus BAC clone RP24-92G16 from chromosome y, complete sequence Length = 239400 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 8153 ctatctctgtctctgtctctgtccctc 8179
>gb|AC175317.3| Mus musculus BAC clone RP24-65G8 from chromosome y, complete sequence Length = 199276 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 109925 ctatctctgtctctgtctctgtccctc 109899
>gb|AC174442.3| Mus musculus BAC clone RP24-542K12 from chromosome y, complete sequence Length = 195770 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 149574 ctatctctgtctctgtctctgtccctc 149600
>gb|AC175672.2| Mus musculus BAC clone RP24-254K21 from chromosome y, complete sequence Length = 189044 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 7832 ctatctctgtctctgtctctgtccctc 7858
>emb|BX511202.3|RN217N9 Rattus norvegicus chromosome 1 BAC RP32-217N9, complete sequence Length = 178012 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 473 tctctgtctctgtccctccttcc 495 ||||||||||||||||||||||| Sbjct: 4536 tctctgtctctgtccctccttcc 4514 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 34603 tttctgtctctgtctctgtc 34584
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 attttggaatggaaggagtacat 47 ||||||||||||||||||||||| Sbjct: 17635881 attttggaatggaaggagtacat 17635903 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 attttggaatggaaggagtac 45 ||||||||||||||||||||| Sbjct: 20820710 attttggaatggaaggagtac 20820690 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 attttggaatggaaggagtacata 48 ||||||||||||| |||||||||| Sbjct: 27572332 attttggaatggagggagtacata 27572309 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 attttggaatggaaggagta 44 |||||||||||||||||||| Sbjct: 3053449 attttggaatggaaggagta 3053430
>gb|AC145558.5| Mus musculus BAC clone RP24-502L18 from Y, complete sequence Length = 175294 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 71248 ctatctctgtctctgtctctgtccctc 71222
>gb|AC107675.13| Mus musculus chromosome 1, clone RP24-471N7, complete sequence Length = 127374 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 79178 tctgtctctgtctctgtccctcc 79156
>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete sequence Length = 211214 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 467 tttctgtctctgtctctgtccct 489 ||||||||||||||||||||||| Sbjct: 161853 tttctgtctctgtctctgtccct 161875
>gb|DQ316901.1| Hordeum vulgare subsp. vulgare cultivar Priekulu 1 beta-amylase (Bmy1) gene, intron III Length = 1087 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttg 30 ||||||||||||||||||||||| Sbjct: 143 acaaatctaagacaagaattttg 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 |||||||| |||||||||||||||| Sbjct: 91 tagacaaagctaagacaagaatttt 67
>gb|DQ316900.1| Hordeum vulgare subsp. vulgare cultivar Malva beta-amylase (Bmy1) gene, intron III Length = 1083 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttg 30 ||||||||||||||||||||||| Sbjct: 143 acaaatctaagacaagaattttg 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 |||||||| |||||||||||||||| Sbjct: 91 tagacaaagctaagacaagaatttt 67
>gb|DQ316899.1| Hordeum vulgare subsp. vulgare cultivar Rasa beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttg 30 ||||||||||||||||||||||| Sbjct: 143 acaaatctaagacaagaattttg 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 |||||||| |||||||||||||||| Sbjct: 91 tagacaaagctaagacaagaatttt 67
>gb|DQ316898.1| Hordeum vulgare subsp. vulgare cultivar Kombainieris beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttg 30 ||||||||||||||||||||||| Sbjct: 143 acaaatctaagacaagaattttg 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 |||||||| |||||||||||||||| Sbjct: 91 tagacaaagctaagacaagaatttt 67
>gb|DQ316897.1| Hordeum vulgare subsp. vulgare cultivar Ansis beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttg 30 ||||||||||||||||||||||| Sbjct: 143 acaaatctaagacaagaattttg 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 |||||||| |||||||||||||||| Sbjct: 91 tagacaaagctaagacaagaatttt 67
>gb|AC175709.2| Mus musculus BAC clone RP24-7D4 from chromosome y, complete sequence Length = 160976 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 38570 ctatctctgtctctgtctctgtccctc 38596
>gb|AC175460.3| Mus musculus BAC clone RP24-48K24 from chromosome y, complete sequence Length = 184160 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 24762 ctatctctgtctctgtctctgtccctc 24736
>gb|AC175384.2| Mus musculus BAC clone RP24-168P1 from chromosome y, complete sequence Length = 183854 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 149476 ctatctctgtctctgtctctgtccctc 149450
>gb|AC122335.4| Mus musculus BAC clone RP23-350F7 from chromosome 10, complete sequence Length = 193300 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 75872 tctgtctctgtctctgtccctcc 75850
>gb|AC175748.1| Mus musculus chromosome Y clone RP24-269D6, complete sequence Length = 145592 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 118099 ctatctctgtctctgtctctgtccctc 118073
>gb|AC175746.1| Mus musculus chromosome Y clone RP24-387C1, complete sequence Length = 143806 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 130449 ctatctctgtctctgtctctgtccctc 130475
>gb|AC173997.2| Mus musculus BAC clone RP24-190A13 from chromosome y, complete sequence Length = 156779 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 50151 ctatctctgtctctgtctctgtccctc 50177
>gb|AC134255.4| Mus musculus BAC clone RP24-81J5 from chromosome unknown, complete sequence Length = 193021 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 173527 ctatctctgtctctgtctctgtccctc 173553
>gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amylase (beta-amy1) gene, complete cds Length = 5126 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttg 30 ||||||||||||||||||||||| Sbjct: 2692 acaaatctaagacaagaattttg 2714 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaatttt 29 |||||||| |||||||||||||||| Sbjct: 2640 tagacaaagctaagacaagaatttt 2616
>emb|AL772343.17| Mouse DNA sequence from clone RP23-196N14 on chromosome 4, complete sequence Length = 154059 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtc 486 ||||||||||||||||||||||| Sbjct: 39222 ctatttctgtctctgtctctgtc 39200
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 attttggaatggaaggagtacat 47 ||||||||||||||||||||||| Sbjct: 112531 attttggaatggaaggagtacat 112553
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 attttggaatggaaggagtacat 47 ||||||||||||||||||||||| Sbjct: 21270 attttggaatggaaggagtacat 21292
>gb|AC174445.2| Mus musculus BAC clone RP24-115O3 from chromosome y, complete sequence Length = 183031 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 13873 ctatctctgtctctgtctctgtccctc 13847
>gb|AC155729.3| Mus musculus 6 BAC RP24-173B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198782 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 152894 tctgtctctgtctctgtccctcc 152872 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtc 486 |||||||||||||||||||| Sbjct: 152908 tttctgtctctgtctctgtc 152889
>emb|BX255946.6| Mouse DNA sequence from clone RP23-82A14 on chromosome 4, complete sequence Length = 116194 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 80399 tctgtctctgtctctgtccctcc 80421
>gb|AC145373.4| Mus musculus BAC clone RP24-155N24 from Y, complete sequence Length = 159348 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 101847 tctgtctctgtctctgtccctcc 101825
>gb|AC147622.3| Mus musculus BAC clone RP24-318A22 from Y, complete sequence Length = 154280 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 8956 ctatctctgtctctgtctctgtccctc 8930
>gb|AC148329.3| Mus musculus BAC clone RP24-176F13 from Y, complete sequence Length = 149159 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 78762 ctatctctgtctctgtctctgtccctc 78788
>gb|AC147183.3| Mus musculus BAC clone RP24-373J6 from Y, complete sequence Length = 153001 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 96117 ctatctctgtctctgtctctgtccctc 96143
>gb|AC134541.6| Mus musculus BAC clone RP24-405G18 from Y, complete sequence Length = 183142 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||| |||||||||||||||||||||| Sbjct: 154763 ctatctctgtctctgtctctgtccctc 154789
>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete sequence Length = 171593 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 37214 tctgtctctgtctctgtccctcc 37192
>gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complete sequence Length = 240997 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 203333 tctgtctctgtctctgtccctcc 203355
>gb|AC147230.3| Mus musculus BAC clone RP23-239N12 from 15, complete sequence Length = 255976 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 467 tttctgtctctgtctctgtccct 489 ||||||||||||||||||||||| Sbjct: 155534 tttctgtctctgtctctgtccct 155512
>emb|CT025668.10| Mouse DNA sequence from clone RP24-370M11 on chromosome 17, complete sequence Length = 230212 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 206330 tctgtctctgtctctgtccctcc 206352
>emb|CT025556.12| Mouse DNA sequence from clone RP24-91G8 on chromosome 13, complete sequence Length = 225239 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccctc 490 |||||||||||||||||||| |||||| Sbjct: 85882 ctatttctgtctctgtctctctccctc 85856
>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence Length = 190996 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctcc 491 ||||||||||||||||||||||| Sbjct: 16922 tctgtctctgtctctgtccctcc 16944
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 14 ctaagacaagaattttggaatggaaggagta 44 |||||||||||||||||||| ||| |||||| Sbjct: 7209 ctaagacaagaattttggaacggagggagta 7239
>emb|AL672066.10| Mouse DNA sequence from clone RP23-311G7 on chromosome X, complete sequence Length = 152281 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtc 486 ||||||||||||||||||||||| Sbjct: 6113 ctatttctgtctctgtctctgtc 6091
>gb|AC147479.17| Mus musculus chromosome 17, clone RP24-178C19, complete sequence Length = 178820 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 63850 tctgtctctgtctctgtccctc 63829
>gb|AC151292.2| Mus musculus BAC clone RP23-138P14 from chromosome 17, complete sequence Length = 216585 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 170146 tctgtctctgtctctgtccctc 170167
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence Length = 197609 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 126339 tatttctgtctctgtctctgtc 126360
>gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosome 8, complete sequence Length = 231778 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 203648 tctgtctctgtctctgtccctc 203669
>ref|NM_009276.1| Mus musculus simple repeat sequence-containing transcript (Srst), mRNA Length = 1263 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||| ||||||||||||||||||||| Sbjct: 732 ctatctctgtctctgtctctgtccct 707
>gb|AC139217.8| Mus musculus chromosome 1, clone RP23-428E11, complete sequence Length = 188052 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 470 ctgtctctgtctctgtccctccttcc 495 ||||||||||||||||| |||||||| Sbjct: 41008 ctgtctctgtctctgtctctccttcc 40983
>gb|AC113469.9| Mus musculus chromosome 8, clone RP23-261B5, complete sequence Length = 198937 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 150109 tctgtctctgtctctgtccctc 150130
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 8 acaaatctaagacaagaattttggaatgga 37 |||||| ||||||||||||||||| ||||| Sbjct: 84385 acaaatgtaagacaagaattttgggatgga 84414 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagta 44 ||||||||||||||||||| | || |||| ||| |||||| Sbjct: 179918 tagacaaatctaagacaagtaattcggaacggagggagta 179957 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 5 tagacaaatctaagacaagaattttggaatggaaggagta 44 |||||||||| || ||||| | ||||||||||| |||||| Sbjct: 179822 tagacaaatccaaaacaagtaatttggaatggagggagta 179783
>gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, complete sequence Length = 169209 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 58222 ttctgtctctgtctctgtccct 58243
>gb|AC102523.9| Mus musculus chromosome 15, clone RP24-184F9, complete sequence Length = 171422 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 154288 tatttctgtctctgtctctgtc 154267
>gb|AC146440.5| Pan troglodytes BAC clone RP43-11P11 from 7, complete sequence Length = 181369 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 ctgtctctgtctctgtccctcc 491 |||||||||||||||||||||| Sbjct: 65617 ctgtctctgtctctgtccctcc 65596
>gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's Hospital Oakland Research Institute) complete sequence Length = 133054 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 23690 tctgtctctgtctctgtccctc 23711 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 23644 tctgtctctgtctctgtccctc 23665
>gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's Hospital Oakland Research Institute) complete sequence Length = 209228 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 129313 tctgtctctgtctctgtccctc 129292
>ref|NM_015070.2| Homo sapiens zinc finger CCCH-type containing 13 (ZC3H13), mRNA Length = 6409 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 4203 ttctgtctctgtctctgtccct 4182
>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence Length = 253420 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 162188 tctgtctctgtctctgtccctc 162167
>gb|AF292513.1| Zea luxurians cultivar M018 granule-bound starch synthase (waxy) gene, partial cds Length = 1365 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 749 tctgtctctgtctctgtccctc 728
>gb|AC158556.9| Mus musculus chromosome 15, clone RP23-140F20, complete sequence Length = 203053 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 93074 tctgtctctgtctctgtccctc 93053
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence Length = 294716 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||| ||||||||||||||||||||| Sbjct: 281494 ctatctctgtctctgtctctgtccct 281469
>gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, complete sequence Length = 176471 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 67907 tctgtctctgtctctgtccctc 67886
>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence Length = 167687 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 36397 tctgtctctgtctctgtccctc 36376
>gb|AC162447.5| Mus musculus chromosome 1, clone RP24-84B18, complete sequence Length = 217720 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 35682 tctgtctctgtctctgtccctc 35703
>gb|AC157790.10| Mus musculus chromosome 7, clone RP24-151M10, complete sequence Length = 167728 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 67847 tctgtctctgtctctgtccctc 67826
>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence Length = 241184 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 66324 tctgtctctgtctctgtccctc 66303
>gb|AC124751.4| Mus musculus BAC clone RP23-274P18 from chromosome 13, complete sequence Length = 160979 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 13774 tctgtctctgtctctgtccctc 13753
>emb|CR974489.8| Mouse DNA sequence from clone RP23-78L13 on chromosome 12, complete sequence Length = 232346 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 70374 tctgtctctgtctctgtccctc 70353
>ref|XM_542572.2| PREDICTED: Canis familiaris similar to Protein KIAA0853 (LOC485453), mRNA Length = 5026 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 4148 ttctgtctctgtctctgtccct 4127
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 ctgtctctgtctctgtccctcc 491 |||||||||||||||||||||| Sbjct: 30231 ctgtctctgtctctgtccctcc 30252
>gb|AC122502.5| Mus musculus BAC clone RP24-413E14 from chromosome 17, complete sequence Length = 187423 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgtccct 489 |||| ||||||||||||||||||||| Sbjct: 91497 ctatctctgtctctgtctctgtccct 91522
>gb|AC125188.4| Mus musculus BAC clone RP23-303O19 from chromosome 9, complete sequence Length = 194053 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 ctgtctctgtctctgtccctcc 491 |||||||||||||||||||||| Sbjct: 22181 ctgtctctgtctctgtccctcc 22160
>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178905 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 471 tgtctctgtctctgtccctcct 492 |||||||||||||||||||||| Sbjct: 37130 tgtctctgtctctgtccctcct 37109
>gb|AC122393.3| Mus musculus BAC clone RP24-83E21 from chromosome 15, complete sequence Length = 223656 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 35437 tatttctgtctctgtctctgtc 35416
>gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosome 5, complete sequence Length = 162871 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 48517 tatttctgtctctgtctctgtc 48538
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 157404 tctgtctctgtctctgtccctc 157383
>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence Length = 208152 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 22941 tatttctgtctctgtctctgtc 22962
>gb|AC127311.3| Mus musculus BAC clone RP23-301C7 from 6, complete sequence Length = 224182 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 14418 tctgtctctgtctctgtccctc 14439
>gb|AC117233.3| Mus musculus BAC clone RP23-408M8 from 6, complete sequence Length = 187083 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 21910 tctgtctctgtctctgtccctc 21889
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence Length = 183991 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 162805 tctgtctctgtctctgtccctc 162784
>gb|AC136913.7| Mus musculus chromosome 15, clone RP23-315N11, complete sequence Length = 127286 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 10920 tatttctgtctctgtctctgtc 10899
>gb|AC166936.1| Mus musculus BAC clone RP24-244M17 from chromosome 12, complete sequence Length = 167608 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 26324 tctgtctctgtctctgtccctc 26345
>gb|AC153789.11| Mus musculus chromosome 8, clone RP23-466N7, complete sequence Length = 187150 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 117200 tctgtctctgtctctgtccctc 117221
>emb|AL445232.5| Human DNA sequence from clone RP11-71J12 on chromosome 13 Contains the 3' end of a novel gene (contains FLJ31860 and KIAA0853), possible ortholog of mouse 3110050K21Rik protein, complete sequence Length = 148103 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 102144 ttctgtctctgtctctgtccct 102165
>emb|AL357352.11| Human DNA sequence from clone RP11-799G19 on chromosome 6 Contains part of the TRDN gene for triadin (TDN, TRIADIN), complete sequence Length = 106601 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 14760 tctgtctctgtctctgtccctc 14781
>gb|AC095402.7| Rattus norvegicus 2 BAC CH230-7A22 (Children's Hospital Oakland Research Institute) complete sequence Length = 224026 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 118287 tctgtctctgtctctgtccctc 118266
>emb|AL157892.23| Human DNA sequence from clone RP11-309N24 on chromosome 10 Contains a novel gene, complete sequence Length = 25342 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 7903 tctgtctctgtctctgtccctc 7882
>emb|AL133352.12| Human DNA sequence from clone RP11-411B6 on chromosome 10 Contains the 3' end of the WNT8B gene for wingless-type MMTV integration site family member 8B, the gene for secretory pathway component Sec31B-1 (SEC31B-1), the NDUFB8 gene for NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8, 19kDa, the HIF1AN gene for hypoxia-inducible factor 1, alpha subunit inhibitor and four CpG islands, complete sequence Length = 157808 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 111495 ttctgtctctgtctctgtccct 111516
>gb|AC111678.6| Rattus norvegicus 18 BAC CH230-60A14 (Children's Hospital Oakland Research Institute) complete sequence Length = 146568 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 111086 tctgtctctgtctctgtccctc 111107
>emb|AL022333.1|HS474I12 Human DNA sequence from clone RP3-474I12 on chromosome 22q13.1-13.2, complete sequence Length = 80343 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 ctgtctctgtctctgtccctcc 491 |||||||||||||||||||||| Sbjct: 19240 ctgtctctgtctctgtccctcc 19261
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5' end of the Arf-1 gene for ADP-ribosylation factor 1, the Wnt3a gene for wingless-related MMTV integration site 3A, the Wnt9a gene for wingless-type MMTV integration site 9A, two novel genes, the 5' end of a novel gene and five CpG islands, complete sequence Length = 225396 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 467 tttctgtctctgtctctgtccctcct 492 ||||||||||||||||| |||||||| Sbjct: 28477 tttctgtctctgtctctctccctcct 28502 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 ctgtctctgtctctgtccctc 490 ||||||||||||||||||||| Sbjct: 168516 ctgtctctgtctctgtccctc 168536
>gb|AC154318.3| Mus musculus BAC clone RP23-316D19 from chromosome 12, complete sequence Length = 176391 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 126850 tctgtctctgtctctgtccctc 126871
>gb|AY283618.1| Homo sapiens hypothetical protein mRNA, complete cds Length = 6409 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 4203 ttctgtctctgtctctgtccct 4182
>gb|AC141020.2| Rattus norvegicus BAC CH230-497A18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 168022 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 127811 tctgtctctgtctctgtccctc 127832
>gb|AC162692.2| Mus musculus chromosome 1, clone RP23-445K23, complete sequence Length = 181625 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 164092 tctgtctctgtctctgtccctc 164113
>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224664 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 51630 tatttctgtctctgtctctgtc 51609
>gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome 12, complete sequence Length = 215236 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 212728 tctgtctctgtctctgtccctc 212749
>gb|AC163654.2| Mus musculus BAC clone RP23-259M14 from chromosome 16, complete sequence Length = 159273 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 118184 tctgtctctgtctctgtccctc 118163
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 8 acaaatctaagacaagaattttggaatggaaggagtac 45 ||||||||||||||| |||||||| | ||| ||||||| Sbjct: 222826 acaaatctaagacaataattttgggacggagggagtac 222789
>gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosome 9, complete sequence Length = 176943 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 ctgtctctgtctctgtccctcc 491 |||||||||||||||||||||| Sbjct: 133934 ctgtctctgtctctgtccctcc 133913
>emb|AL136745.1|HSM801713 Homo sapiens mRNA; cDNA DKFZp434D1812 (from clone DKFZp434D1812) Length = 5469 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 3241 ttctgtctctgtctctgtccct 3220
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 323226 tatttctgtctctgtctctgtc 323247
>gb|AC114147.5| Rattus norvegicus BAC CH230-144F3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 214988 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 68804 tctgtctctgtctctgtccctc 68825
>dbj|AK074924.1| Homo sapiens cDNA FLJ90443 fis, clone NT2RP3001061 Length = 4793 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 1259 ttctgtctctgtctctgtccct 1238
>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence Length = 186105 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 30256 tctgtctctgtctctgtccctc 30277
>gb|U34613.1|MMCOL18A08 Mus musculus alpha-1(XVIII) collagen (COL18A1) gene, exon 31-33, and partial cds Length = 2099 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 669 tctgtctctgtctctgtccctc 690
>dbj|AK157257.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830208G10 product:unclassifiable, full insert sequence Length = 4637 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 2101 tctgtctctgtctctgtccctc 2122
>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence Length = 175606 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 116448 tctgtctctgtctctgtccctc 116469
>dbj|AK165436.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530001E14 product:potassium inwardly-rectifying channel, subfamily J, member 15, full insert sequence Length = 4412 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 ttctgtctctgtctctgtccct 489 |||||||||||||||||||||| Sbjct: 3663 ttctgtctctgtctctgtccct 3684
>gb|AF371281.1|AH010774S3 Drosophila melanogaster voltage-dependent calcium channel alpha13 subunit mRNA, partial cds Length = 1970 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||| ||||||||||||||||||||| Sbjct: 392 ctatctctgtctctgtctctgtccct 367
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 79622 tctgtctctgtctctgtccctc 79601
>dbj|AK047539.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930086G04 product:unclassifiable, full insert sequence Length = 2638 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 1901 tctgtctctgtctctgtccctc 1922
>gb|AC151052.4| Mus musculus BAC clone RP24-72K12 from chromosome 7, complete sequence Length = 216989 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 87159 tctgtctctgtctctgtccctc 87180
>gb|AC116732.10| Mus musculus chromosome 3, clone RP23-347F4, complete sequence Length = 187006 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 41607 tctgtctctgtctctgtccctc 41628
>gb|AC099860.13| Mus musculus chromosome 1, clone RP23-5C23, complete sequence Length = 230538 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 214464 tctgtctctgtctctgtccctc 214485
>gb|AC074019.7| Homo sapiens BAC clone RP11-271M11 from 2, complete sequence Length = 127559 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 464 ctatttctgtctctgtctctgt 485 |||||||||||||||||||||| Sbjct: 122717 ctatttctgtctctgtctctgt 122738
>emb|AL929027.10| Mouse DNA sequence from clone RP23-217F24 on chromosome 2, complete sequence Length = 174282 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 117977 tctgtctctgtctctgtccctc 117998
>gb|AC133209.4| Mus musculus BAC clone RP23-21E5 from chromosome 3, complete sequence Length = 164837 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 467 tttctgtctctgtctctgtccctcct 492 |||||||||||||||||||| ||||| Sbjct: 51451 tttctgtctctgtctctgtcactcct 51476
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 181814 tctgtctctgtctctgtccctc 181793
>gb|AC105333.16| Mus musculus chromosome 18, clone RP23-259G13, complete sequence Length = 210768 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 142462 tctgtctctgtctctgtccctc 142483
>gb|AF007544.1|AF007544 Homo sapiens prostate-specific membrane antigen (PSM) gene, complete cds Length = 93525 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 461 ctgctatttctgtctctgtctctgtc 486 ||||| |||||||||||||||||||| Sbjct: 77615 ctgctgtttctgtctctgtctctgtc 77640
>emb|CT010449.10| Mouse DNA sequence from clone RP23-347O24 on chromosome 12, complete sequence Length = 203697 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 75897 tctgtctctgtctctgtccctc 75918
>gb|AC162298.4| Mus musculus chromosome 1, clone RP24-285P15, complete sequence Length = 138146 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 45093 tctgtctctgtctctgtccctc 45114
>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete sequence Length = 219568 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 20966 tctgtctctgtctctgtccctc 20987
>emb|AL928598.7| Mouse DNA sequence from clone RP23-326I20 on chromosome 2, complete sequence Length = 148583 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 37472 tctgtctctgtctctgtccctc 37493
>emb|AL929465.6| Mouse DNA sequence from clone RP23-395N7 on chromosome 4, complete sequence Length = 197037 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 46891 tctgtctctgtctctgtccctc 46912
>gb|AC149587.5| Mus musculus BAC clone RP23-472J13 from 5, complete sequence Length = 188522 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 51512 tctgtctctgtctctgtccctc 51533
>gb|AC139155.3| Mus musculus BAC clone RP24-209E3 from 13, complete sequence Length = 161907 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 ctgtctctgtctctgtccctcc 491 |||||||||||||||||||||| Sbjct: 142746 ctgtctctgtctctgtccctcc 142767
>gb|AC132103.3| Mus musculus BAC clone RP24-363K20 from 9, complete sequence Length = 192053 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 125417 tctgtctctgtctctgtccctc 125438
>gb|AC149064.3| Mus musculus BAC clone RP23-140I7 from 18, complete sequence Length = 183953 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 37466 tatttctgtctctgtctctgtc 37445
>gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence Length = 211774 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 48404 tctgtctctgtctctgtccctc 48425
>gb|AC172750.1| Mus musculus BAC clone RP24-177J9 from chromosome 7, complete sequence Length = 145766 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 64598 tatttctgtctctgtctctgtc 64619
>emb|AL627077.14| Mouse DNA sequence from clone RP23-384D6 on chromosome 4, complete sequence Length = 190647 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 73405 tctgtctctgtctctgtccctc 73384
>emb|AL670462.8| Mouse DNA sequence from clone RP23-225F2 on chromosome X, complete sequence Length = 199841 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 461 ctgctatttctgtctctgtctctgtccctccttc 494 ||||| ||||| |||||||||||||| ||||||| Sbjct: 118234 ctgctctttctctctctgtctctgtctctccttc 118267
>emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chromosome 4, complete sequence Length = 212647 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 49373 tctgtctctgtctctgtccctc 49352
>emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on chromosome 4, complete sequence Length = 209339 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 135072 tctgtctctgtctctgtccctc 135093
>emb|X67863.1|MMT2 M.musculus T2 mRNA Length = 1263 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 ctatttctgtctctgtctctgtccct 489 |||| ||||||||||||||||||||| Sbjct: 732 ctatctctgtctctgtctctgtccct 707
>gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosome 7, complete sequence Length = 172485 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 tatttctgtctctgtctctgtc 486 |||||||||||||||||||||| Sbjct: 3781 tatttctgtctctgtctctgtc 3802
>gb|AC171111.2| Mus musculus BAC clone RP24-131J20 from chromosome 17, complete sequence Length = 167872 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 tctgtctctgtctctgtccctc 490 |||||||||||||||||||||| Sbjct: 160557 tctgtctctgtctctgtccctc 160536 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,618,946 Number of Sequences: 3902068 Number of extensions: 5618946 Number of successful extensions: 237311 Number of sequences better than 10.0: 1205 Number of HSP's better than 10.0 without gapping: 1211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 223041 Number of HSP's gapped (non-prelim): 13987 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
