ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags4e20 |
|---|---|
| Clone Library Name | barley_pub |
>RPTN_HUMAN (Q6XPR3) Repetin| Length = 784 Score = 39.3 bits (90), Expect = 0.007 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 + RDR+THE H+ RD ++ NR + RDR+THE+ H+ Sbjct: 741 QRRDRQTHEHEQSHQRRDRQTHEDKQNR----QRRDRQTHEDEQNHQ 783 Score = 37.0 bits (84), Expect = 0.035 Identities = 16/57 (28%), Positives = 32/57 (56%) Frame = -2 Query: 491 RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRS 321 +DR+TH+D H+ RD ++ + + RDR+THE+ + R +H+ +++ Sbjct: 729 QDRRTHKDEQNHQRRDRQTHEHEQSH----QRRDRQTHEDKQNRQRRDRQTHEDEQN 781
>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25| Length = 415 Score = 38.5 bits (88), Expect = 0.012 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%) Frame = -2 Query: 536 DRYDPNANRLSD-------DENRDRKTHEDYGRHKTRDSDRYDPNANRLSD------DEN 396 +RYD A R + D+ RDR +DY R + S R D ++R D D N Sbjct: 254 ERYDRAARRSASPRPDRRRDDRRDRDQDQDYRRDRNSRSSRRDARSSRDRDTDAFGRDRN 313 Query: 395 RDRKTHEEYGRHRARYSDSH 336 RDR +H G A +D H Sbjct: 314 RDRGSHSRNGNADAN-ADQH 332 Score = 32.3 bits (72), Expect = 0.86 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 21/91 (23%) Frame = -2 Query: 515 NRLSDDENRDRKTHED-------------YGRHKTRDSD-RYDPNANRLSD-------DE 399 +R D DR++H D + + D D RYD A R + D+ Sbjct: 215 DRRHRDREHDRRSHRDRDGERENRVERVYHSSRRDHDRDERYDRAARRSASPRPDRRRDD 274 Query: 398 NRDRKTHEEYGRHRARYSDSHDSKRSRYDDS 306 RDR ++Y R R S D++ SR D+ Sbjct: 275 RRDRDQDQDYRRDRNSRSSRRDARSSRDRDT 305
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 38.1 bits (87), Expect = 0.016 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY 348 D A+R DD +RDR+ + R +TRD D + D RD+ + + R R R Sbjct: 35 DRKASRYDDDYSRDRERDRERERDRTRDYRDRDRDY-----DRRRDKDRYRDDDRDRRRR 89 Query: 347 SDSHDSKRSRYD 312 D D +R D Sbjct: 90 DDKDDRRREERD 101 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -2 Query: 515 NRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD 342 +R D +RDR DY R + +D R D R DD++ R+ + G R R S+ Sbjct: 58 DRTRDYRDRDR----DYDRRRDKDRYRDDDRDRRRRDDKDDRRREERDRGSDRKRDSE 111 Score = 29.3 bits (64), Expect = 7.3 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = -2 Query: 458 HKTRDSDRYDPN-ANRLSDDENRDRKTHEEYGRHRAR-YSD-SHDSKRSRYDDSY 303 H + S R D A+R DD +RDR+ E R R R Y D D R R D Y Sbjct: 25 HPSSSSRRQDDRKASRYDDDYSRDRERDRERERDRTRDYRDRDRDYDRRRDKDRY 79
>TOP1_XENLA (P41512) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| Length = 829 Score = 37.4 bits (85), Expect = 0.027 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Frame = -2 Query: 527 DPNANRLSDD-ENRDRKTHEDYGRHKTRDSDRY-DPNANRLSDDEN---RDRKTHEEYGR 363 DP+ + D +N D+ +D +H+ RD +++ D N + D E +D + H+E + Sbjct: 53 DPSEKKHKDKHKNNDKHREKDGEKHRERDGEKHRDKNGEKHRDGEKHKEKDIEKHKEVEK 112 Query: 362 HRARYSDSHDSK 327 HR + + H K Sbjct: 113 HRVKDGEKHKEK 124 Score = 28.9 bits (63), Expect = 9.5 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Frame = -2 Query: 527 DPNANRLSDDEN---RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 D N + D E +D + H++ +H+ +D +++ + + +D + H + +H+ Sbjct: 87 DKNGEKHRDGEKHKEKDIEKHKEVEKHRVKDGEKH--KEKDVEKHKEKDVEKHRDGEKHK 144 Query: 356 ARYSDSHDSKRSRYDDS 306 R D K + S Sbjct: 145 HRDKDREKKKEEKMKSS 161
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 37.0 bits (84), Expect = 0.035 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = -2 Query: 533 RYDPNANRLSD--DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 360 R D + +R D DE+ R + D R + R DR DD + RK+ E + Sbjct: 61 RRDRSVDRRDDHRDEDSYRSSRRDRSRDRRRSRDR--------GDDRDHRRKSRER--DY 110 Query: 359 RARYSDSHDSKRSRYDDS 306 R+R DS D R R DDS Sbjct: 111 RSRRDDSRDRARRRTDDS 128
>RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-rich 7 (p54)| Length = 452 Score = 37.0 bits (84), Expect = 0.035 Identities = 25/70 (35%), Positives = 33/70 (47%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY 348 D + R D +R R D R ++R DR +R D+++RDRK R R R Sbjct: 300 DRDRRRSRDRRSRSRDRDRDRDRKRSRSRDR--KRRSRSRDNKDRDRK--RSRSRDRRRR 355 Query: 347 SDSHDSKRSR 318 S S D KR R Sbjct: 356 SKSRDRKRER 365 Score = 33.9 bits (76), Expect = 0.29 Identities = 23/75 (30%), Positives = 36/75 (48%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 R P+ R D +RDR D R ++R DR + +R D + + ++ + R R+ Sbjct: 281 RRSPSPRRRRDSRDRDRD--RDRDRRRSR--DRRSRSRDRDRDRDRKRSRSRDRKRRSRS 336 Query: 353 RYSDSHDSKRSRYDD 309 R + D KRSR D Sbjct: 337 RDNKDRDRKRSRSRD 351
>YP62_CAEEL (Q09437) Putative serine/threonine-protein kinase B0495.2 (EC| 2.7.11.1) Length = 719 Score = 36.6 bits (83), Expect = 0.045 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 12/84 (14%) Frame = -2 Query: 521 NANRLSDDENRDRKTHEDYGRHKTRDSDRYD---PNANRLSDD-------ENRDRKTHE- 375 NA + +D RD++ D R K + DR D P+A + D RD+K HE Sbjct: 75 NAQKAKEDRYRDKE--RDKKREKDKRDDRRDVRGPDARQKDRDFKGRQERSGRDQKVHEH 132 Query: 374 -EYGRHRARYSDSHDSKRSRYDDS 306 + HR +D H + RS D S Sbjct: 133 RHHHHHRKHETDGHRTNRSNRDRS 156 Score = 30.8 bits (68), Expect = 2.5 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = -2 Query: 491 RDRKTHE--DYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEY-GRHRARYSDSHDSKRS 321 RD+K HE + H+ ++D + N + RD + H+ + RH+ + S D+ +S Sbjct: 125 RDQKVHEHRHHHHHRKHETDGHRTNRSNRDRSSERDSEKHKRHIDRHKKSSTTSPDNDKS 184 Query: 320 RYDDS 306 + S Sbjct: 185 PHKKS 189
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 36.6 bits (83), Expect = 0.045 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 DR D + + + +R+R+ + R + R+ DR L + R+R+ E R R Sbjct: 666 DRVDDRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDR 725 Query: 356 ARYSD-SHDSKRSR 318 R D HD +R R Sbjct: 726 ERDRDRDHDRERER 739 Score = 32.7 bits (73), Expect = 0.66 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRS 321 D +R+R+ + R K R+ +R + R + R+R+ E R RAR D ++ Sbjct: 732 DHDRERERERERDREKEREREREERERER---ERERERERERERERERARERDKERERQR 788 Query: 320 RYDD 309 ++D Sbjct: 789 DWED 792
>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6| Length = 545 Score = 35.8 bits (81), Expect = 0.078 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 ++R R HEDY R ++R+ DR+ D RDR+ EY RHR Sbjct: 504 KSRSRDRHEDYYRERSRERDRH----RERDRDRERDREREREY-RHR 545 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = -2 Query: 530 YDPNANRLSDDENRDR-KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 Y A R RD ++ E RHK+R DR++ + +R+R H E R R Sbjct: 478 YGSVAGRRERSRERDHSRSREKSRRHKSRSRDRHEDYYR----ERSRERDRHRERDRDRE 533 Query: 353 RYSDSHDSKRSR 318 R + R R Sbjct: 534 RDREREREYRHR 545
>IWS1_HUMAN (Q96ST2) IWS1-like protein| Length = 819 Score = 35.8 bits (81), Expect = 0.078 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 14/90 (15%) Frame = -2 Query: 527 DPNANRLSDDENRDR-------KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTH--- 378 +P R+SD E+ + E+ RH+ DS+ + R+SD E+ D H Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261 Query: 377 ----EEYGRHRARYSDSHDSKRSRYDDSYN 300 EE + R S+S D R++ DS N Sbjct: 262 DSENEELPKPRISDSESEDPPRNQASDSEN 291 Score = 33.1 bits (74), Expect = 0.50 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%) Frame = -2 Query: 512 RLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRD-------RKTHEEYGRHRA 354 ++SD E+ E+ RH+ DS+ +P R+SD E+ + EE RH+A Sbjct: 181 QISDSES------EEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQA 234 Query: 353 RYSDSHDSKRSRYDDS 306 S++ + + R DS Sbjct: 235 SDSENEELPKPRISDS 250 Score = 32.3 bits (72), Expect = 0.86 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR-------KTHEEYGRHRARY 348 SD EN ED G+H DS+ + + SD E D EE RH+A Sbjct: 144 SDSEN------EDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASD 197 Query: 347 SDSHDSKRSRYDDS 306 S++ + + R DS Sbjct: 198 SENEEPPKPRMSDS 211
>SNWA_DICDI (P54705) Protein snwA| Length = 685 Score = 35.0 bits (79), Expect = 0.13 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR--KTHEEYGR 363 D + N N S DE+++++T R ++R ++R P+ N DD++R R + GR Sbjct: 370 DSDNDNDNDSSSDEDKNKRTPPMNRRSRSRSTERI-PSRNDNDDDDDRYRIKDNRDNRGR 428 Query: 362 HRARYSDSHDSKRSR 318 D+ DS+ SR Sbjct: 429 DNIDSRDNRDSRDSR 443 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDS-DRYDPNANRLSDDENRDRKTHEEYGRH 360 D D NR S D R + + +RD+ D D NR + D NR R + R+ Sbjct: 429 DNIDSRDNRDSRDSRDSRDSRDSRDSRDSRDNRDSRDSRDNRDNRD-NRRRDDSNDRDRY 487 Query: 359 RARYSDSHDSKRSRYDDS 306 R SDS S DS Sbjct: 488 SKRRSDSDSDSDSDSSDS 505 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRK--THEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGR 363 +R +L++D +R + Y R DSD + N N S DE+++++T R Sbjct: 338 ERKQDMLRKLAEDVRNERSGIIQQRYTRKDNSDSD--NDNDNDSSSDEDKNKRTPPMNRR 395 Query: 362 HRARYSDSHDSKRSRYDD 309 R+R ++ S+ DD Sbjct: 396 SRSRSTERIPSRNDNDDD 413 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDS-DRYDPNANRLSDD-ENRDRKTHEEYGR 363 D D +R S D R + + +RDS D D NR DD +RDR + Sbjct: 435 DNRDSRDSRDSRDSRDSRDSRDSRDNRDSRDSRDNRDNRDNRRRDDSNDRDRYSKRRSDS 494 Query: 362 HRARYSDSHDSKRSR 318 SDS DS+ R Sbjct: 495 DSDSDSDSSDSEDER 509
>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein| 25) (RNA-binding region-containing protein 7) (Protein S164) Length = 784 Score = 35.0 bits (79), Expect = 0.13 Identities = 17/68 (25%), Positives = 28/68 (41%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 S D N+DR + R + R+ +R + R+R+ E R R R D + Sbjct: 315 SSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDR 374 Query: 326 RSRYDDSY 303 +D+Y Sbjct: 375 EEDEEDAY 382 Score = 33.1 bits (74), Expect = 0.50 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 D +RDR D R + RD DR S D N+DR E R R R Sbjct: 289 DRDRDRTKERDRDRDRERDRDR----DRERSSDRNKDRSRSREKSRDRER 334 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%) Frame = -2 Query: 500 DENRDRKTHED------YGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD- 342 D +RDR+ D R K+RD +R + R+R+ E R R R + Sbjct: 307 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 366 Query: 341 SHDSKRSRYDD 309 D KR R +D Sbjct: 367 EKDKKRDREED 377 Score = 30.8 bits (68), Expect = 2.5 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 D +RDR+ D R ++ D ++ + S D R+R+ E R R R Sbjct: 299 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERER 348 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 + +RDR D R + R SDR + S +++RDR+ E R R R Sbjct: 297 ERDRDRDRERDRDRDRERSSDRNKDRSR--SREKSRDRERERERERERER 344 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD-SHDSKR 324 + R+R+ + + K R+ +R + + +RDR + R R R SD + D R Sbjct: 265 EREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSR 324 Query: 323 SR 318 SR Sbjct: 325 SR 326
>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF65) Length = 488 Score = 35.0 bits (79), Expect = 0.13 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNA--NRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 +E RDR + R ++R DR D + +R D +RDR E R R+R + D + Sbjct: 45 EEKRDRDDEDRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRERRRDRSRDRNRDDRR 104 Query: 326 RSRYDD 309 R DD Sbjct: 105 GGRDDD 110
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 34.7 bits (78), Expect = 0.17 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = -2 Query: 500 DENRDRKTHEDYG-RHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHD-SK 327 D +RDR+ D G R ++RD DR + +D +R + H + RHR+R S D S Sbjct: 169 DRDRDRERRRDRGDRDRSRDRDRSHRRSRHEDEDAHRSHR-HRSH-RHRSRSPLSPDRSD 226 Query: 326 RSRYDD 309 R R DD Sbjct: 227 RKRGDD 232
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 34.7 bits (78), Expect = 0.17 Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 13/78 (16%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTR-----DSDRYDPNANRLSDDE--NRDRKTHEEYGRH------ 360 D RDR ++ R R D D Y P+ S D +RDR +Y R Sbjct: 53 DRERDRDSYRRRDRSLDRRADYRDEDTYRPSRRDRSRDRRRSRDRDDDRDYRRRSRDRDF 112 Query: 359 RARYSDSHDSKRSRYDDS 306 R+R DS D R R DDS Sbjct: 113 RSRRDDSRDRARRRTDDS 130
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 34.7 bits (78), Expect = 0.17 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN---RDRKTHEEYGR 363 R D R R R D R RD+ R +A+R DD + RDR+ R Sbjct: 407 RPDVGGGRDRSTSRRSRSPRRDRDRRDDRDNRRGPRDADRRRDDRDLDRRDRRGDRSRDR 466 Query: 362 HRARYSDSHDSKRSRYDDS 306 +R R + D +R R D+ Sbjct: 467 YRDRDYNDRDHRRGRDRDN 485
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 34.3 bits (77), Expect = 0.23 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSR 318 E R + DY R + R ++R +P + DD R R YG R Y S S+ + Sbjct: 38 EYRGGRERSDY-RERERFNNRDNPRSRDRYDDRRRGRDVTGRYGNRRDDYPRSFRSRHNT 96 Query: 317 YDDS 306 DDS Sbjct: 97 RDDS 100
>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25| Length = 444 Score = 34.3 bits (77), Expect = 0.23 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -2 Query: 503 DDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH-RARYSDSHDSK 327 DD K ++ RHK R DD +RD + RH R R SDS D Sbjct: 174 DDSQIAAKGGKEQRRHKHRSHHHRSDRHRDRDDDRDRDSARDRDRDRHSRRRRSDSRDRS 233 Query: 326 RSR 318 RSR Sbjct: 234 RSR 236 Score = 33.5 bits (75), Expect = 0.38 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRD----RKTHEEYG 366 R+ ++ D +RDR D + RD DR+ S D +R R++ E Sbjct: 188 RHKHRSHHHRSDRHRDRDDDRDRDSARDRDRDRHSRRRRSDSRDRSRSRSPRRRSDSEED 247 Query: 365 RHRARYSDSHDSKRSRYDD 309 R + R DS D R R D Sbjct: 248 RSKQRRRDSPDRTRRRDRD 266
>SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2| Length = 523 Score = 34.3 bits (77), Expect = 0.23 Identities = 23/74 (31%), Positives = 32/74 (43%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 DR + R D +RDR D R + D+ RY+ N S +R R T + + R R Sbjct: 388 DRNSERSER-DKDHHRDRDRDRDSRRLEYDDTYRYESRRNG-SSRRDRSRSTSDRHSRRR 445 Query: 356 ARYSDSHDSKRSRY 315 D D + RY Sbjct: 446 KYEGDDGDRRDDRY 459 Score = 30.8 bits (68), Expect = 2.5 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = -2 Query: 455 KTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDDSY 303 K DS+ + +R S+ RD+ H + R R DS+R YDD+Y Sbjct: 376 KRDDSEDWKEERDRNSERSERDKDHHRDRDRDR-------DSRRLEYDDTY 419
>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 34.3 bits (77), Expect = 0.23 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 360 Y P+ + D+ R+R + R + RD DR + RDR+ EE RH Sbjct: 325 YVPSTTKTPRDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKKRH 381
>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6| (RNA-binding protein srp-1) (CeSRp20) Length = 179 Score = 33.9 bits (76), Expect = 0.29 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD----SHD 333 D R R D GR ++RD R D + +R S D +R+R E R R+R SH Sbjct: 104 DRGRSRSRSRDRGRDRSRDRSR-DRSRDR-SRDRSRERSRERERTRSRSRSPQERDRSHS 161 Query: 332 SKRSR 318 RSR Sbjct: 162 KSRSR 166
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 33.9 bits (76), Expect = 0.29 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 11/76 (14%) Frame = -2 Query: 500 DENRD---RKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGR--------HRA 354 D +RD R+ H R RD D Y +RDR +Y R +R+ Sbjct: 54 DRDRDSYRRRDHSVDRRDSHRDEDNYRRRDRSRDRRRSRDRDHDRDYRRRSRSRDRDYRS 113 Query: 353 RYSDSHDSKRSRYDDS 306 R DS D R R DDS Sbjct: 114 RRDDSRDRVRRRTDDS 129
>CWC25_USTMA (Q4P6I3) Pre-mRNA-splicing factor CWC25| Length = 520 Score = 33.9 bits (76), Expect = 0.29 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -2 Query: 503 DDENRDRKTHEDYGRHKTRDSDRY-----DPNANRLSDDENRDRKTHEEYGRHRARYSDS 339 D+E R K H D + RD RY D + +R + NRDR+ + +R S S Sbjct: 327 DEERRSLKRHRD---DQDRDRHRYERRLHDADDSRPASRSNRDRRDKDAVDESSSRQSTS 383 Query: 338 HDSKRSR 318 + RSR Sbjct: 384 YSRSRSR 390 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTR-DSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRS 321 ++RDRK+ + G R D D + R DD++RDR Y R DS + RS Sbjct: 307 DDRDRKSSWNEGSSSRRHDGDEERRSLKRHRDDQDRDR---HRYERRLHDADDSRPASRS 363 Query: 320 RYD 312 D Sbjct: 364 NRD 366
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 33.9 bits (76), Expect = 0.29 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = -2 Query: 506 SDDENRDRKTHEDY---GRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSH 336 S D R+ K H D GR + RDS R + +R D +RDR+ + R R R S H Sbjct: 290 SRDRPREDKHHRDRDQGGRDRDRDSRR---DRDRTRDRGDRDRRDRD---RGRDRTSRDH 343 Query: 335 DSKRSR 318 D RSR Sbjct: 344 DRDRSR 349
>CWC25_SCHPO (Q9Y805) Pre-mRNA-splicing factor cwc25 (Complexed with cdc5| protein 25) (Cell cycle control protein cwf25) Length = 376 Score = 33.9 bits (76), Expect = 0.29 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 R+ +R + D +R+R +E + K S R N D N +TH + RHR Sbjct: 171 RHRDRHHRSNQDRSRERSDNEQHSSDKREHSRRSYRN-----DRNNWRERTHNDRYRHRD 225 Query: 353 RYSDSHDSKRSRYDD 309 +Y + K YDD Sbjct: 226 KYDSGYFKK--HYDD 238
>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)| Length = 1386 Score = 33.9 bits (76), Expect = 0.29 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 16/89 (17%) Frame = -2 Query: 536 DRYDPNANR---------LSD--DENRDRKTHEDYGRHKTRD--SDRYDPNANRLSDDEN 396 DRYD + +R ++D D RDR+TH D R + D DR+D R DD N Sbjct: 926 DRYDRDRDREPYFDRPSNITDHRDFKRDRETHRDRDRDRVLDYERDRFD-RERRPRDDRN 984 Query: 395 ---RDRKTHEEYGRHRARYSDSHDSKRSR 318 RD+K H R S+D K R Sbjct: 985 QSYRDKKDHSS-SRRGGFDRPSYDRKSDR 1012
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 33.9 bits (76), Expect = 0.29 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = -2 Query: 503 DDENRDRKTHEDYGRHKTRDSDRYDPNANRLSD--DENRDRKTHEEYGR 363 DD RD+ EDY R RD DR +R D D + D + +YGR Sbjct: 1071 DDWERDQDMDEDYNREMERDMDRDVDRISRPMDMYDRSLDNEWDRDYGR 1119 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Frame = -2 Query: 530 YDPNANRLSD--DENRDRKTHEDYGRHK---TRDSDRYDPNANRLSD--DENRDRKTHEE 372 +D +N ++D D RDR+TH D R + D DR+D D RD+K H Sbjct: 1501 FDRQSNVIADHRDFKRDRETHRDRDRDRGVIDYDRDRFDRERRPRDDRAQSYRDKKDHSS 1560 Query: 371 YGRHRARYSDSHDSKRSR 318 R S+D K R Sbjct: 1561 -SRRGGFDRPSYDRKSDR 1577
>SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2| Length = 358 Score = 33.5 bits (75), Expect = 0.38 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDS-----DRYDPNANRLSDDENRDRKTHEE 372 DR D +R S D +RDR D R + RD+ DR++ ++R S D++ R Sbjct: 84 DRSDRRRDR-SRDRDRDRNRDGDRNRDRRRDNRSQDRDRHNNRSSRPSRDDDASRSRRRS 142 Query: 371 YGRHRARYSDSHDSK 327 R R R D K Sbjct: 143 TSRSRDRDHKPKDPK 157 Score = 33.5 bits (75), Expect = 0.38 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDSDR-----YDPNANRLSDDENRDRKTHEEYGRHRARYSDSHD 333 ENRDR D R ++RD DR D N +R D+ ++DR H +R D+ Sbjct: 81 ENRDRS---DRRRDRSRDRDRDRNRDGDRNRDRRRDNRSQDRDRHNNRSSRPSRDDDASR 137 Query: 332 SKR 324 S+R Sbjct: 138 SRR 140
>U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 auxiliary factor| 59 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF59) Length = 517 Score = 33.5 bits (75), Expect = 0.38 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Frame = -2 Query: 518 ANRLSDDENRDRKTHEDYGRHKTRDS------DRYDPNANRLSDDENRDRKTHEEYGRH- 360 ++RLS +R K H DY + R R DP + S+ R R+ ++ RH Sbjct: 4 SSRLSSGSSRIPKRHRDYRDEEPRRERGSGGIGREDPRGHYGSERPRRRRRDESDFRRHR 63 Query: 359 ----RARYSDSHDSKRSRYDD 309 R+ D + RYDD Sbjct: 64 ESRERSYREDERPRRERRYDD 84
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 33.5 bits (75), Expect = 0.38 Identities = 24/73 (32%), Positives = 32/73 (43%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 DR N D +R+R + D R + RD DR S D +RDR+ + R R Sbjct: 1870 DRERDNDRAKEWDRSRERSRNRDRDRERRRDRDR------SRSRDRDRDRERARDRDRDR 1923 Query: 356 ARYSDSHDSKRSR 318 R D D +SR Sbjct: 1924 GR--DRKDRSKSR 1934 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDS 330 D+ RDR ++ D + RD+DR +D + R S + +RDR+ + R R+R D D Sbjct: 1860 DKGRDRSSNRD----RERDNDRAKEWDRSRER-SRNRDRDRERRRDRDRSRSRDRD-RDR 1913 Query: 329 KRSRYDD 309 +R+R D Sbjct: 1914 ERARDRD 1920
>STC_DROME (P40798) Protein shuttle craft| Length = 1106 Score = 33.1 bits (74), Expect = 0.50 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = -2 Query: 518 ANRLSDDEN--RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR-ARY 348 AN + N R+R+ D R + RD DR D + +R D +RDR G R R Sbjct: 224 ANNQCSNHNYERERERERDRDRDRERDRDR-DRDRDR---DRDRDRDRDSRPGNTRQQRR 279 Query: 347 SDSHDSKRSRYDDS 306 SD D + RY+ S Sbjct: 280 SDYRDDREDRYERS 293 Score = 32.0 bits (71), Expect = 1.1 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSD--DENRDRKTHEEYGRHRARYSDSHDSK 327 D +RDR D R + RDS + R SD D+ DR +E R R + +D+ Sbjct: 250 DRDRDRDRDRDRDRDRDRDSRPGNTRQQRRSDYRDDREDR--YERSDRRRPQKQQRYDNH 307 Query: 326 RS--RYDD 309 RS R DD Sbjct: 308 RSNKRRDD 315
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 32.7 bits (73), Expect = 0.66 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = -2 Query: 503 DDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKR 324 + + + R+THE+ H+ + N R + R+R+THEE + +Y D R Sbjct: 1010 NQQRQHRQTHEENHDHQHGRHHEDEHNHRRQDHHQQRERQTHEE----KEKYQGGQDQSR 1065 Query: 323 S 321 S Sbjct: 1066 S 1066 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 9/77 (11%) Frame = -2 Query: 527 DPNANRLSDDEN----RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEE---- 372 D + + + D EN ++ +THE+ H+T D + N+ + + R+THEE Sbjct: 970 DWDRHSVEDQENLYEMQNWQTHEEEQSHQTSDRQTHVDEQNQ----QRQHRQTHEENHDH 1025 Query: 371 -YGRHRARYSDSHDSKR 324 +GRH + D H+ +R Sbjct: 1026 QHGRH---HEDEHNHRR 1039 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Frame = -2 Query: 521 NANRLSDDENRDRKTHEDYGRHK-TRDSDRYDPNANR--LSDDEN----RDRKTHEEYG- 366 N R + R+R+THE+ +++ +D R PN + +S+D+ + R+ H +G Sbjct: 1036 NHRRQDHHQQRERQTHEEKEKYQGGQDQSRSFPNREKSHMSEDDQCEGPQGRRFHPTHGG 1095 Query: 365 --RHRARYSDSHDSKRSRY 315 R S +H +K + Y Sbjct: 1096 GKSQRREKSGNHPTKPANY 1114
>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 570 Score = 32.3 bits (72), Expect = 0.86 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -2 Query: 521 NANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE-EYGRHRARYS 345 N+ + DE R R ++ DYG R +R+ A+R ++ + R+ E E GRH++ S Sbjct: 469 NSMAMCSDEERYR-SYRDYG---DRGYERHRERASREKEERHGGRRHREKEEGRHKSSRS 524 Query: 344 DSHDSKRSRYDDSY 303 S S DS+ Sbjct: 525 SSRRRHESEEGDSH 538
>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA| helicase (EC 3.6.1.-) Length = 1168 Score = 32.3 bits (72), Expect = 0.86 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Frame = -2 Query: 512 RLSDDENRDRKTHE-----DYGRHKTRDS--DRYDPNANRLSDDENRDRKT---HEEYGR 363 R +D NRDR E D R++ RD DR+ D+E DR++ H E GR Sbjct: 122 RREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHRERGR 181 Query: 362 HRARYSDSHDSKRSR 318 + D +R R Sbjct: 182 GDG--GEGEDRRRDR 194
>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA| helicase mog-5 (EC 3.6.1.-) (Sex determination protein mog-5) (Masculinization of germ line protein 5) Length = 1200 Score = 32.3 bits (72), Expect = 0.86 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDD----ENRDRKTHEEYGRHRARYSDSHD 333 + +R R D R ++R DR +R +D + RDR + GR R D Sbjct: 155 NRSRSRSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQR 214 Query: 332 SKRSRYDD 309 +R R DD Sbjct: 215 DRRDRRDD 222
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 32.3 bits (72), Expect = 0.86 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Frame = -2 Query: 536 DRYDPNA---NRLSDDENRDRKTH-----EDYGRHKTRDSDRYDPNANRLSDDENRD--- 390 D Y PNA + DD DR+ + H +DS+R + R S+D+ RD Sbjct: 373 DSYRPNAGGYQKRGDDRRHDRRDQPTARGDTSSWHSRQDSER----SYRESNDDTRDRSN 428 Query: 389 ---RKTHEEYGRHRARYSDSHDSKR 324 R+ H++ + S+ HDS R Sbjct: 429 KRSRRHHDDVPQQSRSRSERHDSHR 453 Score = 28.9 bits (63), Expect = 9.5 Identities = 21/75 (28%), Positives = 32/75 (42%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 RY+ +++ D+ R H+ RD DR + R D +RDR + R R Sbjct: 475 RYEAHSHTRHDEHTR---RHDSSSTAARRDEDR---RSERSRHDRDRDRDRDRDRDRERE 528 Query: 353 RYSDSHDSKRSRYDD 309 + D R R+DD Sbjct: 529 HRRRTED--RRRHDD 541
>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 32.3 bits (72), Expect = 0.86 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 Y + R E ++ E RHK+R DR+D + +R+R+ H + R R R Sbjct: 485 YGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRDR 540 Query: 350 YSDSHDSKRSR 318 D R R Sbjct: 541 ERDREREYRHR 551
>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6| (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68-kDa subunit) (Protein HPBRII-4/7) Length = 551 Score = 32.3 bits (72), Expect = 0.86 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 Y + R E ++ E RHK+R DR+D + +R+R+ H + R R R Sbjct: 485 YGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRDR 540 Query: 350 YSDSHDSKRSR 318 D R R Sbjct: 541 ERDREREYRHR 551
>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 32.3 bits (72), Expect = 0.86 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 Y + R E ++ E RHK+R DR+D + +R+R+ H + R R R Sbjct: 485 YGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRDR 540 Query: 350 YSDSHDSKRSR 318 D R R Sbjct: 541 ERDREREYRHR 551
>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6| Length = 552 Score = 32.3 bits (72), Expect = 0.86 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -2 Query: 530 YDPNANRLSDDENRDR-KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 Y + R RD ++ E RHK+R DR+D + +R+R+ H + R R Sbjct: 485 YGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRD 540 Query: 353 RYSDSHDSKRSR 318 R D R R Sbjct: 541 RERDREREYRHR 552
>SWC5_KLULA (Q6CKH1) SWR1-complex protein 5| Length = 315 Score = 32.3 bits (72), Expect = 0.86 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 21/94 (22%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSD-------DENRDRKTHEE 372 +D + S+DE+ D + E R T D+ + D NAN +SD DE D + EE Sbjct: 17 FDEESYHESEDEDFD-PSKEQNKRKTTNDNKKTDVNAN-ISDSDQDEDEDEEYDEEAQEE 74 Query: 371 YGRH--------------RARYSDSHDSKRSRYD 312 ++ RAR + HD+ +++Y+ Sbjct: 75 EKKYSSIVSESGGLIKTRRARLQEEHDALKNKYE 108
>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6| Length = 548 Score = 32.0 bits (71), Expect = 1.1 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -2 Query: 530 YDPNANRLSDDENRDR-KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 Y + R RD ++ E RHK+R DR+D + +R+R+ H + R R Sbjct: 481 YGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRERDRD 536 Query: 353 RYSDSHDSKRSR 318 R D R R Sbjct: 537 RERDREREYRHR 548
>NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD protein)| Length = 380 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/68 (32%), Positives = 27/68 (39%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 S + NRDR + R + RD DR D +RDR E R R R D Sbjct: 191 SHERNRDRDRDRERDRDRDRDRDR------ERDRDRDRDRDRDRERDRDRERDRDRDREG 244 Query: 326 RSRYDDSY 303 R DS+ Sbjct: 245 PFRRSDSF 252
>PDPK1_DROME (Q9W0V1) 3-phosphoinositide-dependent protein kinase 1 (EC| 2.7.11.1) (dPDK-1) (Serine/threonine-protein kinase 61C) (dSTPK61) Length = 836 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -2 Query: 518 ANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDS 339 +N DDE+ DR +ED D YD ++ L D ++ ++ + RHR R + Sbjct: 413 SNSDEDDEDSDRLENED--------EDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNR 464 Query: 338 H 336 H Sbjct: 465 H 465
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 32.0 bits (71), Expect = 1.1 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 DR +R D +RDR D R + R R DP R S R+R+ R R Sbjct: 27 DRSRDERDRFRDVRDRDRD--RDRDRERDRGGYRQDPRDRRYSRSRERERRGSGSRDRSR 84 Query: 356 ARYSD-SHDSKR 324 R D S D+ R Sbjct: 85 DRSRDRSRDAHR 96
>NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD protein)| Length = 375 Score = 31.6 bits (70), Expect = 1.5 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 DR + D+ RDR D R + +D DR D +RDR E R Sbjct: 189 DRSHDRSRDRDRDKERDRDRDRDRDRDRDKDKDRDRDRDRDKERDRDRDRDRDRERDREG 248 Query: 356 A-RYSDSHDSKRS 321 R SDS +R+ Sbjct: 249 PFRRSDSFPERRA 261 Score = 31.2 bits (69), Expect = 1.9 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 S D +RDR ++ R + RD DR D + ++ D +RDR +E R R R D + Sbjct: 191 SHDRSRDRDRDKERDRDRDRDRDR-DRDKDK---DRDRDRDRDKERDRDRDRDRDRERDR 246 Query: 326 RS--RYDDSY 303 R DS+ Sbjct: 247 EGPFRRSDSF 256
>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25| Length = 561 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 19/92 (20%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDD--------ENRDRKT 381 D D R + E R+ D R + R+ +R DP+ + DD E RDRK+ Sbjct: 189 DSRDRRNRRDMEREGERRRRRRDGERTRRRERNR-DPSPSVSDDDRGYRQSSREERDRKS 247 Query: 380 HEEYG-----------RHRARYSDSHDSKRSR 318 E G R R RY D +RSR Sbjct: 248 SREEGGRSRSRDRYRNRSRERYRDRSREERSR 279 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%) Frame = -2 Query: 527 DPNANRLSDD--------ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEE 372 DP+ + DD E RDRK+ + G ++R DRY + D +R+ ++ + Sbjct: 223 DPSPSVSDDDRGYRQSSREERDRKSSREEG-GRSRSRDRYRNRSRERYRDRSREERSRDR 281 Query: 371 YGRHRARYSDSHDSKRSRYDD 309 R R R D R R D Sbjct: 282 -SRERLRSRRDRDRDRDRDRD 301
>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (SBP)| Length = 279 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 11/87 (12%) Frame = -2 Query: 536 DRYDPNAN-RLSDDENRDRKTHEDYG----------RHKTRDSDRYDPNANRLSDDENRD 390 D +D N + + DD+ D ED+G H D D+ D N + D+ RD Sbjct: 154 DDFDDNDDDKEDDDDEHDDDNEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDV--DDERD 211 Query: 389 RKTHEEYGRHRARYSDSHDSKRSRYDD 309 K +E + +D D + S DD Sbjct: 212 DKDDDEEDDDNDKENDKDDGEGSGDDD 238
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPN--ANRLSD--DENRDRKTHEEYGRHRARYSDS 339 + D++RD ++ +GR + RDSD+ D + A +D D+ R+ + +G +Y D Sbjct: 174 AQDKDRDDRS---FGRDRNRDSDKTDTDWRARPTTDSFDDYPPRRGDDSFG---DKYRDR 227 Query: 338 HDSKRSR--YDDSY 303 +DS R R Y D Y Sbjct: 228 YDSDRYRDGYRDGY 241
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPN--ANRLSD--DENRDRKTHEEYGRHRARYSDS 339 + D++RD ++ +GR + RDSD+ D + A +D D+ R+ + +G +Y D Sbjct: 174 AQDKDRDDRS---FGRDRNRDSDKTDTDWRARPATDSFDDYPPRRGDDSFG---DKYRDR 227 Query: 338 HDSKRSR--YDDSY 303 +DS R R Y D Y Sbjct: 228 YDSDRYRDGYRDGY 241
>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)| Length = 749 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH--- 360 ++P DE+R+RK H R + R S P D +R+ K + GRH Sbjct: 675 FEPVEEMKRTDEDRERKRHRKRSRSRRR-SRSCSPR------DRSREHKKSRKSGRHHRS 727 Query: 359 --RARYSDSHDSKRSRYDD 309 R+ D H RSR D Sbjct: 728 RSRSSSRDRHRRNRSRSRD 746
>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 360 Y P+ + D+ R+R + R + RD +R + +R+R+ EE RH Sbjct: 325 YVPSTTKTPRDKERERYRERERDRERDRDRERDRERDRERERERDREREREEEKKRH 381
>SRP2_SCHPO (P78814) Pre-mRNA-splicing factor srp2| Length = 365 Score = 31.6 bits (70), Expect = 1.5 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Frame = -2 Query: 536 DRYDPNANRLSDDENRD------RKTHEDYGRHKTRDSDRYDPNAN--RLSDDENRDRKT 381 D Y P DDE R R+ + D R RD R + ++ R DDE R R Sbjct: 208 DAYRPGR----DDERRYAPRGEYRRNNRDEYRRGGRDEYRRNSRSDYRRPHDDEYR-RPR 262 Query: 380 HEEYGRHRARYSDSHDSKRSRYDDSY 303 +EY R Y S D R +DD Y Sbjct: 263 GDEYRPGRDEYRRSRDDGRPSHDDEY 288
>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 459 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 437 RYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDDSY 303 RY + R S ++R K G HR RY D DS+ R +DSY Sbjct: 391 RYSRSPKRSSRRDSRSPKR----GLHRNRYRDRSDSRSPRREDSY 431 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRY--------DPNANRLSDDENRDRKTH 378 RY + R S ++R K R++ R R D N R +DE RDR+ Sbjct: 391 RYSRSPKRSSRRDSRSPKRGLHRNRYRDRSDSRSPRREDSYRDRNRERSYNDERRDRRDD 450 Query: 377 EEYGRHRAR 351 + Y R R Sbjct: 451 DRYRERRRR 459
>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)| Length = 511 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 13/79 (16%) Frame = -2 Query: 515 NRLSDDENRDRKTHEDYGRHKTR----DSDRYDPNANRL---------SDDENRDRKTHE 375 NRLS E RD +T R + ++ Y+ +A+ SDDE ++K + Sbjct: 396 NRLSQLEGRDLRTTPKVVREAKKVEMTEARAYNADADTAKAASDSESDSDDEEEEKKEKK 455 Query: 374 EYGRHRARYSDSHDSKRSR 318 E R R DS DSK+++ Sbjct: 456 EKKRKRDDDEDSKDSKKAK 474
>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Frame = -2 Query: 536 DRYDPNANRLSDDENRD---------RKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 384 +R + R ++E R+ RK RH +R SDR + +RDR+ Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRDRR 323 Query: 383 THEEYGRHRARYSDSHDSK-RSRYDD 309 R R+R D + K RSR D Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRD 349
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 31.2 bits (69), Expect = 1.9 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYG----------RHKTRDSDRYDPNANRLSDDENRDRKT 381 +D N R + NRDR+ D G R++ R+ DR S + +RD+ Sbjct: 2147 WDRNRERSA---NRDREREADRGKEWDRSRERSRNRERERDRRRDRDRSRSRERDRDKAR 2203 Query: 380 HEEYGRHRARYSDSHDSKR 324 E GR R S S +S R Sbjct: 2204 DRERGRDRKDRSKSKESAR 2222 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHED----------YGRHKTRDSDRYDPNANRLSDDENRDR 387 DR+ + D NR+R + D + R + R +R R D +R R Sbjct: 2136 DRHRDKDSSRDWDRNRERSANRDREREADRGKEWDRSRERSRNRERERDRRRDRDRSRSR 2195 Query: 386 KTHEEYGRHRARYSDSHDSKRSR 318 + + R R R D D +S+ Sbjct: 2196 ERDRDKARDRERGRDRKDRSKSK 2218 Score = 29.3 bits (64), Expect = 7.3 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 15/88 (17%) Frame = -2 Query: 527 DPNAN-RLSDDENRDRK------------THEDYGRHKTRDSDR-YDPNANRLSD-DENR 393 +P+A R S+D R+R+ ++ RH+ +DS R +D N R ++ D R Sbjct: 2102 EPDAQGRASEDRRRERERGRNWSRERDWDRPREWDRHRDKDSSRDWDRNRERSANRDRER 2161 Query: 392 DRKTHEEYGRHRARYSDSHDSKRSRYDD 309 + +E+ R R R S + + +R R D Sbjct: 2162 EADRGKEWDRSRER-SRNRERERDRRRD 2188
>YEMA_DROME (P25992) Yemanuclein-alpha| Length = 1002 Score = 31.2 bits (69), Expect = 1.9 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -2 Query: 503 DDENRDRKTHEDYGRHKTRDSDRYD-PNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 DDEN D ED DS+ D ++ S+ E+ + + + ++Y D+H +K Sbjct: 220 DDENDDGNNEEDDESDSEDDSEENDESDSEDDSESESLEDEDSAATAKSSSKYKDNHQAK 279 Query: 326 RSR 318 R++ Sbjct: 280 RAK 282
>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 581 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR---KTHEEYGRHRA--RYS 345 D +R+R+ D R +TR+ +R + P + + DE R R Y RHRA Sbjct: 453 DRDRERERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 512 Query: 344 DSHDSKRSR 318 + H +R R Sbjct: 513 ERHRERRHR 521
>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 605 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 S +NR R R + R DRY ++ DD DR+ + + R RY D Sbjct: 416 SRQQNRSRSP-----RPRDRSRDRY----HKPRDDRRGDRRDRDRRDQDRNRYRDRDHRD 466 Query: 326 RSRYDDSY 303 R R D Y Sbjct: 467 RGREKDRY 474 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR-KTHEEYGR 363 DR ++ DD DR RD DR D + NR D ++RDR + + YGR Sbjct: 429 DRSRDRYHKPRDDRRGDR-----------RDRDRRDQDRNRYRDRDHRDRGREKDRYGR 476
>YOD2_CAEEL (P34594) Hypothetical protein ZC262.2| Length = 233 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 9/60 (15%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRD---------SDRYDPNANRLSDDENRDRK 384 DR+ P N ++RD++ DYGR+ RD +DR D N +R +D + RD K Sbjct: 53 DRH-PEKNESRRHDDRDQERRRDYGRNDRRDDRRGDGSWKTDRNDRN-DRRNDFQRRDDK 110 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -2 Query: 518 ANRLSDDENRDRKTHEDYGR--HKTRDS----DRYDPNANRLSDDENRDRKTHEEYGRHR 357 A R D++ +K D R HK R+ DR+ P N ++RD++ +YGR+ Sbjct: 21 AKRQKDEKKEKKKEKRDRSRSPHKERERSPKRDRH-PEKNESRRHDDRDQERRRDYGRND 79 Query: 356 AR 351 R Sbjct: 80 RR 81
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 515 NRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANR-LSDDENRDRKTHEEYGRHRAR 351 +R D E R++ R ++R D+ + +R S D++RDRK R RAR Sbjct: 245 SRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERAR 300
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY-SDSHDSKR 324 D +RDR D R + R DR D N R +NR+R R R S D +R Sbjct: 78 DRDRDRARDRDNYRRRDRSLDRRDDNHYRGGRRDNRERDRRRSRDRFDDRIRSPMTDRRR 137 Query: 323 SR 318 +R Sbjct: 138 NR 139 Score = 29.6 bits (65), Expect = 5.6 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 357 DR D + D R ++ R + R+SDR +N L + R+R + R R Sbjct: 26 DRRDRDRRNDGRDHRRRTRSRSPDVRRQHRNSDRL--YSNELLHQQPRNRDRDRDRDRDR 83 Query: 356 ARYSDSH---DSKRSRYDDSY 303 AR D++ D R DD++ Sbjct: 84 ARDRDNYRRRDRSLDRRDDNH 104 Score = 28.9 bits (63), Expect = 9.5 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 9/84 (10%) Frame = -2 Query: 533 RYDPNANRLSDDE-------NRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 375 R N++RL +E NRDR D R + RD D Y D + DR+ Sbjct: 52 RQHRNSDRLYSNELLHQQPRNRDRDRDRD--RDRARDRDNYRRR------DRSLDRRDDN 103 Query: 374 EY--GRHRARYSDSHDSKRSRYDD 309 Y GR R D S R R+DD Sbjct: 104 HYRGGRRDNRERDRRRS-RDRFDD 126
>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 536 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR---KTHEEYGRHRA--RYS 345 D +R+R+ D R +TR+ +R + P + + DE R R Y RHRA Sbjct: 408 DRDRERERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 467 Query: 344 DSHDSKRSR 318 + H +R R Sbjct: 468 ERHRERRHR 476
>MAAZ3_SCHCO (P37937) Mating-type protein A-alpha Z3| Length = 891 Score = 30.8 bits (68), Expect = 2.5 Identities = 19/66 (28%), Positives = 25/66 (37%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSR 318 E R K D + + Y P+ SDDE D E + + SDS D S Sbjct: 342 EQRQAKNERDAAQMREEQRASY-PSPEPSSDDEGEDEDDEESTDAYDSEASDSEDDSDSD 400 Query: 317 YDDSYN 300 D Y+ Sbjct: 401 TDSHYS 406
>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 504 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -2 Query: 491 RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYD 312 RDR D + RD +R D + R D RDR+ + + R+R R + + + D Sbjct: 440 RDRDRERDRSPRRDRDRER-DDHDRRDRDRNGRDRERNGDRERYRERSRERENERYRERD 498 Query: 311 D 309 D Sbjct: 499 D 499
>CCD93_MOUSE (Q7TQK5) Coiled-coil domain-containing protein 93| Length = 629 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 458 HKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDD 309 +K R R A L D+E+R T EYGR RY S SK + +D Sbjct: 176 YKPRRKYRRQRGAEELPDEESRVHSTLLEYGR---RYGFSRQSKTEKAED 222
>SECA_STAES (Q8CPZ2) Preprotein translocase secA subunit| Length = 844 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/67 (26%), Positives = 40/67 (59%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M+ K+++ G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MIPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTL 305 G+ ++T+ Sbjct: 129 GVHVITV 135
>SECA_STAEQ (Q5HQX6) Preprotein translocase secA subunit| Length = 844 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/67 (26%), Positives = 40/67 (59%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M+ K+++ G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MIPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTL 305 G+ ++T+ Sbjct: 129 GVHVITV 135
>DEM1_PHYSA (P05422) Dermorphin-1 precursor [Contains: Deltorphin| (Dermenkephalin); Dermorphin] Length = 197 Score = 30.4 bits (67), Expect = 3.3 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = -2 Query: 512 RLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHD 333 R +++EN + + HE+ K D A + +EN + HEE G RY+ + Sbjct: 27 RETEEENENEENHEEGSEMKRYMFHLMDGEAKKRDSEENEIEENHEE-GSEMKRYAFGYP 85 Query: 332 SKRSR 318 S ++ Sbjct: 86 SGEAK 90
>YO87_CAEEL (P34623) Hypothetical protein ZK1236.7| Length = 324 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN-------RDRKTHEEYGRHRARYS 345 E +RK E+ R K RD +R A+ +++E ++RK HEEY +A ++ Sbjct: 155 EREERKRREEE-REKKRDEERAKEEADEKAEEERLRKEREEKERKEHEEYLAMKASFA 211
>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 588 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR---KTHEEYGRHRA--RYS 345 D +R+R D R +TR+ +R + P + + DE R R Y RHRA Sbjct: 460 DRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 519 Query: 344 DSHDSKRSR 318 + H +R R Sbjct: 520 ERHRERRHR 528
>SECA_STAAW (Q7A1G4) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>SECA_STAAU (O06446) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>SECA_STAAS (Q6GB77) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>SECA_STAAR (Q6GIN8) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>SECA_STAAN (Q7A6R5) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>SECA_STAAM (Q99VM2) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>SECA_STAAC (Q5HHR7) Preprotein translocase secA subunit| Length = 843 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/82 (24%), Positives = 43/82 (52%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G++R M K++I G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>MSS4_YEAST (P38994) Probable phosphatidylinositol-4-phosphate 5-kinase MSS4| (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) Length = 779 Score = 30.0 bits (66), Expect = 4.3 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 14/92 (15%) Frame = -2 Query: 536 DRYDPNANRLSDDENR---DRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYG 366 DR PN+N D +R DR H Y +S+ P RLSD E+ + EE Sbjct: 41 DRSVPNSNSNPDSNHRIKKDRNNHTSYHSSSNSESNMESP---RLSDGESSTPTSIEELN 97 Query: 365 RH-------RARYSDS----HDSKRSRYDDSY 303 + YS S HD+ + DD + Sbjct: 98 PTINNSRLVKRNYSISIDPLHDNSNNNTDDDH 129
>YR748_MIMIV (Q5UP04) Putative ankyrin repeat protein R748| Length = 877 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/74 (27%), Positives = 32/74 (43%) Frame = -2 Query: 521 NANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD 342 N + + NRD + ++ + D + +D L R K HE Y H++ Y Sbjct: 634 NISEKIPNNNRDNNCNNNHNNNIQGDKELFD---KPLHLQYTRLTKLHEHY-IHKSLYKL 689 Query: 341 SHDSKRSRYDDSYN 300 H K ++YD YN Sbjct: 690 RHPIKLNQYDTVYN 703
>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| (Factor interacting with PAP) (hFip1) (Rearranged in hypereosinophilia) Length = 594 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Frame = -2 Query: 500 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR---KTHEEYGRHRA--RYS 345 D +R+R D R +TR+ +R + P + + DE R R Y RHRA Sbjct: 466 DRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 525 Query: 344 DSHDSKRSR 318 + H +R R Sbjct: 526 ERHRERRHR 534
>DR111_ARATH (P42698) DNA-damage-repair/toleration protein DRT111, chloroplast| precursor Length = 387 Score = 30.0 bits (66), Expect = 4.3 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2 Query: 512 RLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 384 R +DE RD++ E+ R K R+ D DP+ +S +E R+ Sbjct: 133 RRQEDEERDKREREE--REKERERDNSDPSRLNISGEEAWKRR 173
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 30.0 bits (66), Expect = 4.3 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -2 Query: 500 DENRDRK-THEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKR 324 D +RDR+ +H D R K R+ DR + R D +RDR ++ R R R D + + Sbjct: 372 DRDRDRRRSHRDRERDKDRERDR---DRRR---DRDRDRDRDRDHKRERDR-GDRGEKRE 424 Query: 323 SRYDDS 306 R D+ Sbjct: 425 ERVPDN 430
>CWC25_GIBZE (Q4IRI9) Pre-mRNA-splicing factor CWC25| Length = 393 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Frame = -2 Query: 497 ENRDRKTHEDYGRHKTRDS-DRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRS 321 E+R R+ H RH++ D DR+ S ++ R+ RHR R DS D Sbjct: 181 EDRHRRRH----RHRSADGEDRHHRRRRSYSRSQSPRRRDGSREDRHRRRRDDSRDRHSR 236 Query: 320 RYDD 309 R D Sbjct: 237 RRRD 240
>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 30.0 bits (66), Expect = 4.3 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Frame = -2 Query: 536 DRYDPNANRLSDDENRD---------RKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 384 +R + R ++E R+ RK RH +R SDR + +R+R+ Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323 Query: 383 THEEYGRHRARYSDSHDSK-RSRYDD 309 R R+R D + K RSR D Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRD 349
>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein| (cAMP regulatory element associated protein 1) (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic acid-inducible phosphoprotein OA48-18) Length = 432 Score = 30.0 bits (66), Expect = 4.3 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Frame = -2 Query: 536 DRYDPNANRLSDDENRD---------RKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 384 +R + R ++E R+ RK RH +R SDR + +R+R+ Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323 Query: 383 THEEYGRHRARYSDSHDSK-RSRYDD 309 R R+R D + K RSR D Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRD 349
>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 30.0 bits (66), Expect = 4.3 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Frame = -2 Query: 536 DRYDPNANRLSDDENRD---------RKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 384 +R + R ++E R+ RK RH +R SDR + +R+R+ Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323 Query: 383 THEEYGRHRARYSDSHDSK-RSRYDD 309 R R+R D + K RSR D Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRD 349
>CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator protein 1| Length = 1157 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPN---ANRLSDDENRDRK 384 D Y+P A D + DR+ +D K + D+ D N R S D+ +D+K Sbjct: 873 DDYEPIAAEEDDGDYDDREDDDDDSSSKDKREDKRDGNRYSKERQSKDKEKDKK 926 Score = 29.3 bits (64), Expect = 7.3 Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 21/96 (21%) Frame = -2 Query: 536 DRYDPNANRLSDDE---------NRDRKTHEDYGRHKTRD---SDRYDPNA--------- 420 D P + SDD+ RD + EDY D D Y+P A Sbjct: 829 DEPKPKRRKSSDDKIKLEEKEERKRDDRRKEDYREEDDPDYENQDDYEPIAAEEDDGDYD 888 Query: 419 NRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYD 312 +R DD++ K E R RYS SK D Sbjct: 889 DREDDDDDSSSKDKREDKRDGNRYSKERQSKDKEKD 924
>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2| Length = 875 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Frame = -2 Query: 506 SDDE------NRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYS 345 SDDE ++ R+ DY R + RD R + N D R+R R R Y Sbjct: 4 SDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER-------RSRGEYR 56 Query: 344 DSHDSKRSRY 315 D ++R R+ Sbjct: 57 DYDRNRRERF 66
>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2| Length = 876 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Frame = -2 Query: 506 SDDE------NRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYS 345 SDDE ++ R+ DY R + RD R + N D R+R R R Y Sbjct: 4 SDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER-------RSRGEYR 56 Query: 344 DSHDSKRSRY 315 D ++R R+ Sbjct: 57 DYDRNRRERF 66
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/63 (28%), Positives = 25/63 (39%) Frame = -2 Query: 521 NANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD 342 +A + DD+ RDR + H+ R D D RD + + Y R R R D Sbjct: 17 SARKRKDDDRRDRDRRDGPVDHRRRSRSPIDRRYRDRDRDRGRDGRDRDSY-RRRDRSID 75 Query: 341 SHD 333 D Sbjct: 76 RRD 78
>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial precursor (EC| 3.4.21.-) Length = 1067 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDD-----ENRDRKTHEEYGR 363 +P N+ D++N +KTH + H D + +DD ++ KT E+Y Sbjct: 58 EPKDNKPLDNKNDPKKTHNEDESHTNESLPSTDKKKKKDNDDFKQNLKSSSNKTEEKYSA 117 Query: 362 HRARYSDSHD 333 +A S + + Sbjct: 118 TQASKSKNDE 127 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -2 Query: 431 DPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDDSY 303 +P N+ D++N +KTH E H S D K+ + +D + Sbjct: 58 EPKDNKPLDNKNDPKKTHNEDESHTNESLPSTDKKKKKDNDDF 100
>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box| protein 8) (RNA helicase HRH1) Length = 1220 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYG-RHRAR 351 D NR D + R R R + R+ + + S +DRK ++YG R+ R Sbjct: 189 DRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDKYGERNLDR 248 Query: 350 YSDSH 336 + D H Sbjct: 249 WRDKH 253
>PBPA_BACSU (P39793) Penicillin-binding protein 1A/1B (PBP1) [Includes:| Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)] Length = 914 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNAN-RLSDDENRDRKTHEEYGRH 360 D + + D + D +T +D T D D+ N N SD+ N+D+ + Sbjct: 811 DEKTQDDTQTDDSQKDDGQTDQDQTDDSTNDQDKKQDNTNTNPSDNNNQDQSNDNDNDNS 870 Query: 359 RARYSDSHDSKRSRYDDS 306 + + DS + D + Sbjct: 871 NNQDTSDGDSNSGKNDST 888
>GNL3_DROME (Q8MT06) Guanine nucleotide-binding protein-like 3 homolog| (Nucleostemin homolog) Length = 581 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = -3 Query: 379 TKSMVDTELDTQIAMIQRGLDMMTLITTQGGIMKSAILEMSTETGGV 239 TKSM + ELD++I +I D ++ T GG A+L+ + G V Sbjct: 302 TKSMQEVELDSKIKLI----DCPGIVFTSGGENSHAVLKNAQRVGDV 344
>IWS1_RAT (Q3SWT4) IWS1-like protein| Length = 764 Score = 29.3 bits (64), Expect = 7.3 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Frame = -2 Query: 506 SDDENRD-------RKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY 348 SD E D ED R + DS+ +P R+SD E+ EE + R Sbjct: 144 SDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPKPRISDSES------EELPKPRISD 197 Query: 347 SDSHDSKRSRYDDS 306 S+S D R + DS Sbjct: 198 SESEDPPRPQVSDS 211
>IWS1_MOUSE (Q8C1D8) IWS1-like protein| Length = 766 Score = 29.3 bits (64), Expect = 7.3 Identities = 21/72 (29%), Positives = 29/72 (40%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY 348 DP + SD E+ E+ + + DS+ DP SD E D H+E Sbjct: 228 DPPRPQASDSES------EELPKPRVSDSESEDPQKGPASDSEAEDASRHKE-----KPD 276 Query: 347 SDSHDSKRSRYD 312 SD D + R D Sbjct: 277 SDDSDGENKRED 288 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -2 Query: 473 EDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDDS 306 ED R + DS+ +P R+SD E+ EE + R S+S D R + DS Sbjct: 162 EDPPRPQASDSENEEPPKPRISDSES------EELPKPRVSDSESEDPPRPQASDS 211
>SECA_STAHJ (Q4L4H8) Preprotein translocase secA subunit| Length = 845 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/82 (23%), Positives = 42/82 (51%) Frame = -3 Query: 505 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 326 A+++ G +R M K+++ G+ + D+A M+TG G+ + + T L+ A+ R Sbjct: 73 ALVREGAKRVFN-MTPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128 Query: 325 GLDMMTLITTQGGIMKSAILEM 260 G+ ++T+ + + E+ Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 29.3 bits (64), Expect = 7.3 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 10/76 (13%) Frame = -2 Query: 503 DDENRDRKTHEDYGR---HKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD--- 342 ++++R+R D R K RD DR D + +R +RDR+ + R R R D Sbjct: 346 EEKSRERDRERDRDREKGEKDRDKDR-DRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDR 404 Query: 341 ----SHDSKRSRYDDS 306 H +R R D S Sbjct: 405 ERDKDHKRERDRGDRS 420
>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1 (Cell| cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain) Length = 1150 Score = 29.3 bits (64), Expect = 7.3 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 13/88 (14%) Frame = -2 Query: 536 DRYDPNANRLSDD----ENRDRKTHEDYGRHKTRDS---------DRYDPNANRLSDDEN 396 D P + DD E+RD + ED + ++D D YDP ++DE Sbjct: 823 DEPKPKRRKSGDDKDKKEDRDERKKEDKRKDDSKDDDETEEDNNQDEYDPMEAEEAEDEE 882 Query: 395 RDRKTHEEYGRHRARYSDSHDSKRSRYD 312 DR E R R + + +R D Sbjct: 883 DDRDEEEMTKRDDKRDINRYCKERPSKD 910
>BFR2_EMENI (Q5AW04) Protein bfr2| Length = 576 Score = 29.3 bits (64), Expect = 7.3 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR-KTHEEYGRHRAR 351 DP R SD+E+ D ED D D + + S+DE + K H GR A Sbjct: 86 DPFRARSSDEESEDESDLEDEDEDGDEDEDE---DISEGSEDERPSKSKAHSLKGREDAD 142 Query: 350 YS-DSHDSKRSR----YDDSYN 300 DS DS+ +DD ++ Sbjct: 143 VGMDSDDSEEDEDGEGFDDGFS 164
>YBE7_YEAST (P34216) Protein YBL047C| Length = 1381 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/74 (27%), Positives = 29/74 (39%) Frame = -2 Query: 521 NANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD 342 N NR+ DDE + +T D DR P SD EN + + G A + Sbjct: 934 NVNRVKDDEEKTERTESDV-------FDRDVPTLGSQSDSENANTNNGTQSGNETAN-PN 985 Query: 341 SHDSKRSRYDDSYN 300 ++ R+D N Sbjct: 986 LTETLSDRFDGDLN 999
>TLE1_MOUSE (Q62440) Transducin-like enhancer protein 1 (Groucho-related| protein 1) (Grg-1) Length = 770 Score = 29.3 bits (64), Expect = 7.3 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Frame = -2 Query: 491 RDRKTHEDYGRHKTRDSDRYD----PNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKR 324 +D K H D RH+ R+S + P++ R +D + + + + D++DS Sbjct: 180 KDDKKHHDAERHRDRESGTSNSLLVPDSLRSTDKRRNGPEFSSDIKKRKVDDKDNYDSDG 239 Query: 323 SRYDDS 306 + DD+ Sbjct: 240 DKSDDN 245
>GBG_YARLI (Q6CHP5) Guanine nucleotide-binding protein gamma subunit| Length = 108 Score = 28.9 bits (63), Expect = 9.5 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = -2 Query: 437 RYDPNANRLSDDENRDRKTHEEYGRHRARYSDS 339 RY+ RL ++++R+R+T + GR +Y+ S Sbjct: 40 RYETAVQRLQEEQDRERQTARQAGRDLIKYTTS 72
>YP158_YEAST (Q99299) Protein YPL158C| Length = 758 Score = 28.9 bits (63), Expect = 9.5 Identities = 15/63 (23%), Positives = 26/63 (41%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 +D R ++E D +D + D + + + DDE + K E GR+ A+ Sbjct: 643 FDGVTVRADEEEEEDEDDEDDEEEEEENDDEEDEEDEEDDEDDEEEEEKRKEGEGRNLAK 702 Query: 350 YSD 342 D Sbjct: 703 EVD 705
>IFH1_YEAST (P39520) Protein IFH1 (Protein RRP3)| Length = 1085 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = -2 Query: 536 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDS--DRYDPNANRLSDDENRDRKTHEEYGR 363 D Y N SDDEN K+ + GRHK+ S + + +N + +++ + TH Sbjct: 496 DEYIFNVFFQSDDENSGHKSKK--GRHKSGKSHIEHKNKGSNLIKSNDDLEPSTHS---- 549 Query: 362 HRARYSDSHDSKRSRYDD 309 S +DS YD+ Sbjct: 550 -TVLNSGKYDSSDDEYDN 566
>YOW5_CAEEL (P30651) Hypothetical protein ZK643.5| Length = 487 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/72 (25%), Positives = 28/72 (38%) Frame = -2 Query: 515 NRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSH 336 +R DR+ +D R + D DR D + D DRK H++ R Sbjct: 267 SRSRSSSRSDRRRRDDRKRPR-EDRDRKDYRRDGRRDGRRDDRKRHDDRRRDSYHRDSDK 325 Query: 335 DSKRSRYDDSYN 300 D KR + ++ Sbjct: 326 DIKRRKEQSKHS 337
>TOP1_RAT (Q9WUL0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| Length = 767 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = -2 Query: 521 NANRLSDDENRDRK-THEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYS 345 N + D+++DR+ H+++ + K +D ++ + + D E + ++ +E +H+ S Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKDKDKDREKSKHSNSEHKDSEKKHKE--KEKTKHKDGSS 76 Query: 344 DSHDSKRSRYD 312 D H K D Sbjct: 77 DKHKDKHKDRD 87
>SRP1_SCHPO (Q10193) Pre-mRNA-splicing factor srp1| Length = 275 Score = 28.9 bits (63), Expect = 9.5 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -2 Query: 491 RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYD 312 R + H D GR ++R ++ + +DE DR++ R R+R D S+ YD Sbjct: 102 RGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGR-SRSPDYD 160
>PRP40_HUMAN (O75400) Pre-mRNA-processing factor 40 homolog A (Formin-binding| protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein HYPA/FBP11) (Fas ligand-associated factor 1) (NY-REN-6 antigen) Length = 957 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/65 (21%), Positives = 30/65 (46%) Frame = -2 Query: 506 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 327 S+ + K H+ + + SD + +A R D + +DR++ ++ R R+ K Sbjct: 862 SERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKK 921 Query: 326 RSRYD 312 ++ D Sbjct: 922 KTGKD 926
>IF4F1_YEAST (P39935) Eukaryotic initiation factor 4F subunit p150 (eIF4F p150)| (eIF-4F p150) (mRNA cap-binding protein complex subunit p150) Length = 952 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/75 (25%), Positives = 33/75 (44%) Frame = -2 Query: 533 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 354 R+ N++R D N + +D +T ++ R S N DR+++ Y R Sbjct: 497 RFGNNSSRGHDFRNTSVRNMDDRANSRT--------SSKRRSKRMNDDRRSNRSYTSRRD 548 Query: 353 RYSDSHDSKRSRYDD 309 R S+ ++ R DD Sbjct: 549 RERGSYRNEEKREDD 563
>NCAP_SENDO (O57286) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 524 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 518 ANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNA 420 A RL++ D THED GR+ D D D A Sbjct: 484 ARRLAERRQEDATTHEDEGRNNGVDHDEEDDAA 516
>NCAP_SENDA (Q9DUE3) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 524 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 518 ANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNA 420 A RL++ D THED GR+ D D D A Sbjct: 484 ARRLAERRQEDATTHEDEGRNNGVDHDEEDDAA 516
>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)| Length = 641 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/70 (22%), Positives = 29/70 (41%) Frame = -2 Query: 530 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 351 Y P + D++ T ED G + D D++D + D + +E+G Sbjct: 236 YSPELAQRGHDDDMS-STSEDDGYPEDMDQDKHDDSTEDSDTDRSDAESDGDEFGHREDS 294 Query: 350 YSDSHDSKRS 321 D+ + K+S Sbjct: 295 ERDNTEEKKS 304
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 14/73 (19%) Frame = -2 Query: 494 NRDRKTHEDYGRH-KTRDSDRYDPNANR--LSDDENRDRKTHEEYGRHRARYSD------ 342 +RDR + RH +R RYD + S +R R+ +EE +R D Sbjct: 150 DRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRSSRAHDYDYEDL 209 Query: 341 -----SHDSKRSR 318 SH+ KRSR Sbjct: 210 RDDDRSHERKRSR 222
>ELOA1_DROME (Q9VCP0) Transcription elongation factor B polypeptide 3 (RNA| polymerase II transcription factor SIII subunit A) (Elongin A) (dEloA) Length = 643 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/67 (17%), Positives = 31/67 (46%) Frame = -2 Query: 527 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY 348 D + +R E ++ K + G HK++DS + + + ++ T ++ + + + Sbjct: 169 DRDKDREGQKEAKEHKEKKSNGEHKSKDSSKSSSSHKSSKSESHKSEHTKSKHEKDKTSH 228 Query: 347 SDSHDSK 327 S+ + K Sbjct: 229 SELKEVK 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,545,879 Number of Sequences: 219361 Number of extensions: 1106073 Number of successful extensions: 3481 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 2839 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3331 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
