>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                          
Query: 230    gcattcaacgacgcctcctgtctctgtgctcatctctagaatagcgctcttcataatccc 289
              ||||||||||| ||||||||||||| |  |||||||||||||| |||| |||||| ||||
Sbjct: 147215 gcattcaacgatgcctcctgtctctatattcatctctagaataacgctgttcatagtccc 147156

                                                                     
Query: 290    tccttgagtggttataagagtcatcatatctagacctctttgaatcatggctatc 344
              | |  || || | |||||| ||||||| ||||||||| || | |||| |||||||
Sbjct: 147155 ttcgagaatgatgataagaatcatcatgtctagaccttttcggatcacggctatc 147101

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                            
Query: 230      gcattcaacgacgcctcctgtctctgtgctcatctctagaatagcgctcttcataatccc 289
                ||||||||||| ||||||||||||| |  |||||||||||||| |||| |||||| ||||
Sbjct: 30879694 gcattcaacgatgcctcctgtctctatattcatctctagaataacgctgttcatagtccc 30879635

                                                                       
Query: 290      tccttgagtggttataagagtcatcatatctagacctctttgaatcatggctatc 344
                | |  || || | |||||| ||||||| ||||||||| || | |||| |||||||
Sbjct: 30879634 ttcgagaatgatgataagaatcatcatgtctagaccttttcggatcacggctatc 30879580

>dbj|AK063294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E08, full
            insert sequence
          Length = 1987

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 230  gcattcaacgacgcctcctgtctctgtgctcatctctagaatagcgctcttcataatccc 289
            ||||||||||| ||||||||||||| |  |||||||||||||| |||| |||||| ||||
Sbjct: 1676 gcattcaacgatgcctcctgtctctatattcatctctagaataacgctgttcatagtccc 1617

                                                                   
Query: 290  tccttgagtggttataagagtcatcatatctagacctctttgaatcatggctatc 344
            | |  || || | |||||| ||||||| ||||||||| || | |||| |||||||
Sbjct: 1616 ttcgagaatgatgataagaatcatcatgtctagaccttttcggatcacggctatc 1562

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                         
Query: 230   gcattcaacgacgcctcctgtctctgtgctcatctctagaatagcgctcttcataatccc 289
             ||||||||||| ||||||||||||| |  |||||||||||||| |||| |||||| ||||
Sbjct: 56272 gcattcaacgatgcctcctgtctctatattcatctctagaataacgctgttcatagtccc 56213

                                                                    
Query: 290   tccttgagtggttataagagtcatcatatctagacctctttgaatcatggctatc 344
             | |  || || | |||||| ||||||| ||||||||| || | |||| |||||||
Sbjct: 56212 ttcgagaatgatgataagaatcatcatgtctagaccttttcggatcacggctatc 56158

>gb|AY112080.1| Zea mays CL35574_1 mRNA sequence
          Length = 832

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 239 gacgcctcctgtctctgtgctcatctctagaatagcgctcttcataatccctccttgagt 298
           ||||||| |||||||| |  || |||||||||||||| | |||||||||||||||||| |
Sbjct: 293 gacgccttctgtctctattttcgtctctagaatagcgttgttcataatccctccttgaat 352

              
Query: 299 ggt 301
           |||
Sbjct: 353 ggt 355

>gb|AC093159.3| Homo sapiens BAC clone RP11-642D6 from 2, complete sequence
          Length = 186561

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 418    tttgcatttgggtcatacctatct 441
              ||||||||||||||||||||||||
Sbjct: 172817 tttgcatttgggtcatacctatct 172794



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 514    tttgcgtttgggtcatacctatct 537
              ||||| ||||||||||||||||||
Sbjct: 172817 tttgcatttgggtcatacctatct 172794

>emb|AL672278.12| Mouse DNA sequence from clone RP23-465H23 on chromosome 16, complete
              sequence
          Length = 187418

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 327    ctttgaatcatggctatctgagtatctagctctgtg 362
              |||||||  |||||||||||||||||| ||||||||
Sbjct: 160495 ctttgaagaatggctatctgagtatctggctctgtg 160530

>emb|AL591489.11| Human DNA sequence from clone RP11-814C6 on chromosome Xq22.2-23
             Contains the 5' end of the gene for a likely ortholog of
             mouse neuralin 1 (NRLN1) and a CpG island, complete
             sequence
          Length = 75140

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   aatgagatgcaatttaagata 223
             |||||||||||||||||||||
Sbjct: 61391 aatgagatgcaatttaagata 61411

>gb|AC160638.6| Mus musculus BAC clone RP23-99K6 from chromosome 15, complete sequence
          Length = 218870

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    acaaacatgagcaaacaaaa 46
             ||||||||||||||||||||
Sbjct: 86825 acaaacatgagcaaacaaaa 86844

>emb|BX664015.1| Serratia marcescens plasmid R478
          Length = 274762

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     aacatggccaaaatctggtg 116
              ||||||||||||||||||||
Sbjct: 178440 aacatggccaaaatctggtg 178421

>gb|AC012083.6| Homo sapiens 12 BAC RP11-864A19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 166257

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   actttgcttcatggaaatga 207
             ||||||||||||||||||||
Sbjct: 64417 actttgcttcatggaaatga 64436

>dbj|AK158921.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library,
            clone:K530008M24 product:unclassifiable, full insert
            sequence
          Length = 4044

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   acaaacatgagcaaacaaaa 46
            ||||||||||||||||||||
Sbjct: 2244 acaaacatgagcaaacaaaa 2263

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 70      attgctggatgacagctagc 89
               ||||||||||||||||||||
Sbjct: 1492743 attgctggatgacagctagc 1492762

>emb|AL772150.11| Mouse DNA sequence from clone RP23-457P12 on chromosome 4, complete
            sequence
          Length = 186505

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  tcatcatatctagacctctttgaa 333
            ||||||||| ||||||||||||||
Sbjct: 9464 tcatcatatgtagacctctttgaa 9487

>emb|AL157756.3|CNS01RG4 Human chromosome 14 DNA sequence BAC C-2184C24 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 127544

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   ttcatggaaatgagatgcaattta 218
             ||||||||||||||| ||||||||
Sbjct: 18564 ttcatggaaatgagaagcaattta 18587


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,071,557
Number of Sequences: 3902068
Number of extensions: 4071557
Number of successful extensions: 70703
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70637
Number of HSP's gapped (non-prelim): 66
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)