ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACE_RABIT (P12822) Angiotensin-converting enzyme, somatic isofor... 30 2.1
2ACET_RABIT (P22968) Angiotensin-converting enzyme, testis-specif... 30 2.1
3IL20_HUMAN (Q9NYY1) Interleukin-20 precursor (IL-20) (Four alpha... 29 2.8
4COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibr... 28 8.0

>ACE_RABIT (P12822) Angiotensin-converting enzyme, somatic isoform precursor (EC|
            3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
            [Contains: Angiotensin-converting enzyme, somatic
            isoform, soluble form]
          Length = 1310

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 15   LTTNNGTHGEK*WLASWRWRPNNVKS 92
            L T NG HGEK     + W PN+ +S
Sbjct: 1212 LLTENGRHGEKLGWPQYTWTPNSARS 1237



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>ACET_RABIT (P22968) Angiotensin-converting enzyme, testis-specific isoform|
           precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl
           carboxypeptidase I) (Kininase II) [Contains:
           Angiotensin-converting enzyme, testis-specific isoform,
           soluble form]
          Length = 737

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 15  LTTNNGTHGEK*WLASWRWRPNNVKS 92
           L T NG HGEK     + W PN+ +S
Sbjct: 639 LLTENGRHGEKLGWPQYTWTPNSARS 664



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>IL20_HUMAN (Q9NYY1) Interleukin-20 precursor (IL-20) (Four alpha helix|
           cytokine Zcyto10)
          Length = 176

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 107 SLVFSGFYIIWSPAPGCKPLFFPMCTI 27
           SL+ + FY++W+P+ G K L    C I
Sbjct: 9   SLLSAAFYLLWTPSTGLKTLNLGSCVI 35



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>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)|
          Length = 3124

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 140  FQDPLFLRQTDSLVFSGFYIIWSPAPG 60
            F+ P  LR +DS + S F + W PAPG
Sbjct: 1087 FKPPRNLRTSDSTM-SSFRVTWEPAPG 1112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,756,689
Number of Sequences: 219361
Number of extensions: 678660
Number of successful extensions: 1391
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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