ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3p03 |
|---|---|
| Clone Library Name | barley_pub |
>VATF_ARATH (Q9ZQX4) Probable vacuolar ATP synthase subunit F (EC 3.6.3.14)| (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 128 Score = 143 bits (360), Expect = 4e-34 Identities = 72/103 (69%), Positives = 86/103 (83%) Frame = -1 Query: 535 LLGF*WLGLAMLICARKQITFLWITKPQVKQIEDAFKEFTAREDIAIVLISQYIANMIRF 356 ++GF G+ + RK + +K V+QIEDAFKEF+AR+DIAI+L+SQYIANMIRF Sbjct: 24 VVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDIAIILLSQYIANMIRF 83 Query: 355 LVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSVA 227 LVDSYNKP+PAILEIPSKDHPYDPA DSVLSRVKYLFSA+SV+ Sbjct: 84 LVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVS 126 Score = 67.8 bits (164), Expect = 2e-11 Identities = 31/37 (83%), Positives = 36/37 (97%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 IA+IADEDTV GFLMAGVGNVD+R+KTNYL+VD+KTT Sbjct: 15 IAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTT 51
>VATF_RAT (P50408) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 119 Score = 92.0 bits (227), Expect(2) = 2e-26 Identities = 39/74 (52%), Positives = 58/74 (78%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 + +IED F++F R+DI I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS Sbjct: 45 INEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDS 104 Query: 271 VLSRVKYLFSADSV 230 +L R K +F+A+ + Sbjct: 105 ILRRAKGMFTAEDL 118 Score = 46.2 bits (108), Expect(2) = 2e-26 Identities = 19/37 (51%), Positives = 28/37 (75%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 IA+I DEDTVTGFL+ G+G ++ + N+L+V+ TT Sbjct: 8 IAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTT 44
>VATF_MOUSE (Q9D1K2) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 119 Score = 92.0 bits (227), Expect(2) = 2e-26 Identities = 39/74 (52%), Positives = 58/74 (78%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 + +IED F++F R+DI I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS Sbjct: 45 INEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDS 104 Query: 271 VLSRVKYLFSADSV 230 +L R K +F+A+ + Sbjct: 105 ILRRAKGMFTAEDL 118 Score = 46.2 bits (108), Expect(2) = 2e-26 Identities = 19/37 (51%), Positives = 28/37 (75%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 IA+I DEDTVTGFL+ G+G ++ + N+L+V+ TT Sbjct: 8 IAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTT 44
>VATF_HUMAN (Q16864) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 119 Score = 90.5 bits (223), Expect(2) = 2e-25 Identities = 38/74 (51%), Positives = 58/74 (78%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 + +IED F++F R+DI I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS Sbjct: 45 INEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDS 104 Query: 271 VLSRVKYLFSADSV 230 +L R + +F+A+ + Sbjct: 105 ILRRARGMFTAEDL 118 Score = 44.7 bits (104), Expect(2) = 2e-25 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = -3 Query: 560 AIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 A+I DEDTVTGFL+ G+G ++ + N+L+V+ TT Sbjct: 9 AVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTT 44
>VATF_BOVIN (Q28029) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Fragment) Length = 110 Score = 90.9 bits (224), Expect(2) = 5e-25 Identities = 38/74 (51%), Positives = 58/74 (78%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 + +IED F++F R+DI I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS Sbjct: 36 INEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDS 95 Query: 271 VLSRVKYLFSADSV 230 +L R + +F+A+ + Sbjct: 96 ILRRARGMFTAEDL 109 Score = 43.1 bits (100), Expect(2) = 5e-25 Identities = 17/35 (48%), Positives = 26/35 (74%) Frame = -3 Query: 557 IIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 +I DEDTVTGFL+ G+G ++ + N+L+V+ TT Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTT 35
>VATF_ANOGA (Q17029) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 127 Score = 89.7 bits (221), Expect(2) = 3e-24 Identities = 40/78 (51%), Positives = 57/78 (73%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 V +IED FK F R+DI I+LI+Q A +IR ++DS+ P PA+LEIPSKDHPYD + DS Sbjct: 49 VSEIEDCFKRFIKRDDIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDS 108 Query: 271 VLSRVKYLFSADSVASDR 218 +L R K +F+ + + ++R Sbjct: 109 ILRRAKGMFNPEDMIANR 126 Score = 41.6 bits (96), Expect(2) = 3e-24 Identities = 16/36 (44%), Positives = 25/36 (69%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKT 456 I++I DEDT GFL+ GVG ++ + N+++VD T Sbjct: 12 ISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNT 47
>VATF_MANSE (P31478) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 124 Score = 86.7 bits (213), Expect(2) = 3e-23 Identities = 35/74 (47%), Positives = 56/74 (75%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 V +IE+ FK F R+DI I+LI+Q +A ++R ++D++ P+P++LEIPSKDHPYD + DS Sbjct: 49 VSEIEECFKRFVKRDDIDIILINQNVAELVRHVIDAHTAPVPSVLEIPSKDHPYDASKDS 108 Query: 271 VLSRVKYLFSADSV 230 +L R K +F+ + + Sbjct: 109 ILRRAKGMFNPEDL 122 Score = 41.2 bits (95), Expect(2) = 3e-23 Identities = 15/36 (41%), Positives = 25/36 (69%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKT 456 I++I DEDT GFL+ G+G ++ + N+++VD T Sbjct: 12 ISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNT 47
>VATF1_DROME (Q24583) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 124 Score = 86.3 bits (212), Expect(2) = 3e-23 Identities = 36/74 (48%), Positives = 55/74 (74%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDS 272 V ++ED FK F R+DI I+LI+Q A +IR ++D++ P+PA+LEIPSKDHPYD + DS Sbjct: 49 VSELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDS 108 Query: 271 VLSRVKYLFSADSV 230 +L R + +F+ + + Sbjct: 109 ILRRARGMFNPEDL 122 Score = 41.6 bits (96), Expect(2) = 3e-23 Identities = 16/36 (44%), Positives = 25/36 (69%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKT 456 I++I DEDT GFL+ GVG ++ + N+++VD T Sbjct: 12 ISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNT 47
>VATF_YEAST (P39111) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 118 Score = 84.0 bits (206), Expect(2) = 3e-22 Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 1/73 (1%) Frame = -1 Query: 460 KPQVKQIEDAFKEFTA-REDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDP 284 K ++I D F FT R+DIAI+LI+Q+IA IR VDS+ PAILEIPSKDHPYDP Sbjct: 44 KTTKEEITDKFNHFTEERDDIAILLINQHIAENIRARVDSFTNAFPAILEIPSKDHPYDP 103 Query: 283 ASDSVLSRVKYLF 245 DSVL RV+ LF Sbjct: 104 EKDSVLKRVRKLF 116 Score = 40.4 bits (93), Expect(2) = 3e-22 Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNV--DLRKKTNYLLVDNKTTGE 447 IA+IADEDT TG L+AG+G + + ++K ++ + KTT E Sbjct: 8 IAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKE 48
>VATF_NEUCR (Q9Y756) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 124 Score = 79.7 bits (195), Expect(2) = 1e-21 Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Frame = -1 Query: 442 IEDAFKEFTA-REDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVL 266 IE AF FT R+DI IVLI+Q+IA+ IR VD++ P +LEIPSKDHPYDP DSVL Sbjct: 56 IEAAFDRFTTERKDIGIVLINQHIADRIRHRVDTHTAAFPTVLEIPSKDHPYDPEKDSVL 115 Query: 265 SRVKYLF 245 RV+ LF Sbjct: 116 RRVRRLF 122 Score = 42.7 bits (99), Expect(2) = 1e-21 Identities = 20/38 (52%), Positives = 29/38 (76%), Gaps = 2/38 (5%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDL--RKKTNYLLVDNKT 456 +A+I DED+VTG L+AG+G+V + N+L+VDNKT Sbjct: 14 LAVIGDEDSVTGLLLAGIGHVTAPPDSQKNFLVVDNKT 51
>VATF_CAEEL (Q23680) Probable vacuolar ATP synthase subunit F (EC 3.6.3.14)| (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 121 Score = 94.7 bits (234), Expect = 2e-19 Identities = 48/100 (48%), Positives = 72/100 (72%) Frame = -1 Query: 535 LLGF*WLGLAMLICARKQITFLWITKPQVKQIEDAFKEFTAREDIAIVLISQYIANMIRF 356 ++GF G+ L ARK + + V++IE+AF F AR+DIAI+LI+Q+IA MIR+ Sbjct: 19 VVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILINQHIAEMIRY 78 Query: 355 LVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSAD 236 VD++ + IPA+LEIPSK+ PYDP+ DS+L+R + LF+ + Sbjct: 79 AVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/37 (56%), Positives = 29/37 (78%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 +A+I DEDTV GFL+ GVG ++ +K NYL+VD +TT Sbjct: 10 LAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTT 46
>VATF1_DROPS (O44091) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Fragment) Length = 90 Score = 74.3 bits (181), Expect(2) = 3e-18 Identities = 31/55 (56%), Positives = 43/55 (78%) Frame = -1 Query: 451 VKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYD 287 V ++ED FK F R+DI I+LI+Q A +IR ++D++ P+PA+LEIPSKDHPYD Sbjct: 33 VSELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYD 87 Score = 37.0 bits (84), Expect(2) = 3e-18 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -3 Query: 548 DEDTVTGFLMAGVGNVDLRKKTNYLLVDNKT 456 DEDT GFL+ GVG ++ + N+++VD T Sbjct: 1 DEDTCVGFLLGGVGEINKNRHPNFMVVDKNT 31
>VATF_XENLA (Q9I8H3) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Fragment) Length = 110 Score = 85.5 bits (210), Expect = 9e-17 Identities = 43/100 (43%), Positives = 64/100 (64%) Frame = -1 Query: 529 GF*WLGLAMLICARKQITFLWITKPQVKQIEDAFKEFTAREDIAIVLISQYIANMIRFLV 350 GF G+ L RK + + V +IE+ F+ F R+DI I+LI+Q+IA MIR ++ Sbjct: 10 GFLLGGIGELNKNRKPNFLVVEKETSVTEIEETFRSFLNRDDIGIILINQFIAEMIRHVI 69 Query: 349 DSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 230 D++ IPA+LEIPSK+HPYD DS+L R K +F+ + + Sbjct: 70 DTHTISIPAVLEIPSKEHPYDATKDSILRRAKGMFTMEDL 109 Score = 44.7 bits (104), Expect = 2e-04 Identities = 17/35 (48%), Positives = 28/35 (80%) Frame = -3 Query: 557 IIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTT 453 +I DEDTVTGFL+ G+G ++ +K N+L+V+ +T+ Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRKPNFLVVEKETS 35
>VATF2_DROME (Q9VNL3) Probable vacuolar ATP synthase subunit F 2 (EC 3.6.3.14)| (V-ATPase F subunit 2) (Vacuolar proton pump F subunit 2) (V-ATPase 14 kDa subunit 2) Length = 129 Score = 80.5 bits (197), Expect = 3e-15 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 14/118 (11%) Frame = -1 Query: 565 SSPS-SLMRTLLLGF*WLGLAMLICARKQITFLW-------------ITKPQVKQIEDAF 428 S+P+ +L RT + F W+ L + ++ W I KQIE+ F Sbjct: 2 STPTHNLPRTRVSAFCWVALERSTRIERPTSWSWKELSHYSLIVFHCIPDTTPKQIEECF 61 Query: 427 KEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVK 254 K+F R DI I+LI+Q A+MIR VD++N +P +LEIPSK HPYD + DS+L R + Sbjct: 62 KKFLRRPDIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQHPYDSSRDSILKRAQ 119
>VATF_SCHPO (O43046) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 120 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = -1 Query: 475 FLWITKPQVKQIEDAFKEFTA-REDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKD 299 F+ K +QI +AF ++T R+DIAIVLI+Q+ A IR ++++ + PA+LEIPSKD Sbjct: 41 FIITQKTTDEQIAEAFDDYTTKRKDIAIVLINQFAAERIRDRIENHVQAFPAVLEIPSKD 100 Query: 298 HPYDPASDSVLSRVK 254 PYDP DS+L RV+ Sbjct: 101 DPYDPEKDSILRRVR 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = -3 Query: 563 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTGE 447 +++I D+DTVTG L+AG G V+ N+ ++ KTT E Sbjct: 12 VSVIGDDDTVTGMLLAGTGQVNENGDKNFFIITQKTTDE 50
>END4_MYCPN (P75457) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 286 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -1 Query: 370 NMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSA 239 N++RF+ K IP +LE PS H Y + + R++ F A Sbjct: 242 NLMRFIAQPQIKQIPIVLETPSDKHNYPAVYGAEIERIRAWFGA 285
>SC160_YEAST (P06105) Protein SCP160 (Protein HX)| Length = 1222 Score = 33.5 bits (75), Expect = 0.43 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Frame = -1 Query: 472 LWITKPQVKQIEDAFK-------EFTAREDIAIVLISQYIANMI---RFLVDSYNKPIPA 323 L ITKP++ +I + K E T ++ L+S AN+ R LV KPI A Sbjct: 121 LSITKPELSRIVQSVKKNHDVSVESTLSKNARTFLVSGVAANVHEAKRELVKKLTKPINA 180 Query: 322 ILEIPSK 302 ++E+PSK Sbjct: 181 VIEVPSK 187
>VNS1_BTV20 (P32931) Nonstructural protein NS1| Length = 552 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = +2 Query: 218 PIRSNRVSRK*ILHTRKDRITCWIIWMVL---GWDFQYRRDWLVVAIHQKSNHVCNILAD 388 P R + + + + W++ MVL G D Q + +WL+ + +K H+C + Sbjct: 285 PTRDRNIVEARVKRSGDENWQSWLLPMVLVREGLDQQEKWEWLLEYMDRK--HICQLCYL 342 Query: 389 EHNSNILPCS 418 +H+ I CS Sbjct: 343 KHSKQIQTCS 352
>VNS1_BTV1A (P33471) Nonstructural protein NS1| Length = 552 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = +2 Query: 218 PIRSNRVSRK*ILHTRKDRITCWIIWMVL---GWDFQYRRDWLVVAIHQKSNHVCNILAD 388 P R + + + + W++ MVL G D Q + +WL+ + +K H+C + Sbjct: 285 PTRDRNIVEARVKRSGDENWQSWLLPMVLVREGLDQQEKWEWLLEYMDRK--HICQLCYL 342 Query: 389 EHNSNILPCS 418 +H+ I CS Sbjct: 343 KHSKQIQTCS 352
>ANFC_RANCA (P20968) C-type natriuretic peptide 1 precursor (CNP I)| Length = 129 Score = 30.4 bits (67), Expect = 3.6 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +3 Query: 183 DAPVINKVATQRLSEATESAENRYFTRERTESLAGSYGWSLDGISNIAGIG 335 D+P +N++ Q+L RY R + G +G LD I +G+G Sbjct: 78 DSPHVNEMTLQQLLNDPVGTSRRYRQRNKKGYSRGCFGVKLDRIGAFSGLG 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,376,795 Number of Sequences: 219361 Number of extensions: 1787099 Number of successful extensions: 4673 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4672 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
