ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3p03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468478.1| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
2gb|AY103927.1| Zea mays PCO061369 mRNA sequence 266 7e-68
3gb|BT012798.1| Lycopersicon esculentum clone 113812R, mRNA sequence 176 5e-41
4gb|DQ317309.1| Musa acuminata putative vacuolar ATP synthase sub... 168 1e-38
5emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4,... 121 3e-24
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9ref|NM_116496.3| Arabidopsis thaliana hydrogen-transporting ATP ... 94 6e-16
10ref|NM_116495.2| Arabidopsis thaliana tryptophan synthase AT4G02... 94 6e-16
11gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome I... 94 6e-16
12gb|AY117236.1| Arabidopsis thaliana putative vacuolar ATPase (At... 94 6e-16
13gb|AY065277.1| Arabidopsis thaliana putative vacuolar ATPase (At... 94 6e-16
14emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c... 94 6e-16
15emb|BX828935.1|CNS0A3F5 Arabidopsis thaliana Full-length cDNA Co... 94 6e-16
16gb|AY084277.1| Arabidopsis thaliana clone 10207 mRNA, complete s... 94 6e-16
17gb|DQ198167.1| Nicotiana tabacum cultivar Samsun NN vacuolar ATP... 72 2e-09
18dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone... 62 2e-06
19ref|XM_471237.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
20emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 i... 52 0.002
21emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in ... 52 0.002
22ref|XM_969923.1| PREDICTED: Tribolium castaneum similar to CG821... 50 0.008
23ref|XM_715957.1| Candida albicans SC5314 vacuolar membrane ATPas... 48 0.031
24gb|AC006974.2| Homo sapiens PAC clone RP5-958B11 from 7, complet... 48 0.031
25gb|AY426266.1| Solanum tarijense blight resistance protein T118 ... 44 0.49
26gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, r... 44 0.49
27gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, r... 44 0.49
28gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56... 44 0.49
29gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 42 1.9
30ref|XM_445592.1| Candida glabrata CBS138, CAGL0D04048g partial mRNA 42 1.9
31emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on ... 42 1.9
32emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 42 1.9
33emb|BX649557.8| Zebrafish DNA sequence from clone DKEYP-61G11 in... 42 1.9
34emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in... 42 1.9
35emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in... 42 1.9
36gb|AC149334.2| Phakopsora pachyrhizi clone JGIAFNA-25D12, comple... 42 1.9
37gb|AC147718.1| Gallus gallus BAC clone CH261-18A20 from chromoso... 42 1.9
38gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 7.7
39ref|XM_715837.1| Candida albicans SC5314 vacuolar H(+)-ATPase (C... 40 7.7
40gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cance... 40 7.7
41gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, co... 40 7.7
42emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 i... 40 7.7
43gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosom... 40 7.7
44gb|AC013454.6|ATAC013454 Arabidopsis thaliana chromosome III BAC... 40 7.7
45gb|AC107769.7| Mus musculus chromosome 16, clone RP23-130N20, co... 40 7.7
46gb|AE014075.1| Escherichia coli CFT073, complete genome 40 7.7
47gb|CP000243.1| Escherichia coli UTI89, complete genome 40 7.7
48emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chr... 40 7.7
49emb|AL589645.10| Human DNA sequence from clone RP11-251H13 on ch... 40 7.7
50emb|AL591030.6| Human DNA sequence from clone RP11-35J1 on chrom... 40 7.7
51emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chr... 40 7.7
52gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 7.7
53gb|DQ443526.1| Agrobacterium vitis NADP-me gene, partial cds; Av... 40 7.7
54dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 7.7
55dbj|AK162877.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 7.7
56gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Canc... 40 7.7
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
58gb|AC171739.3| Cavia porcellus clone CH234-497P15, complete sequ... 40 7.7
59gb|AC018553.6| Homo sapiens chromosome 16 clone RP11-434E6, comp... 40 7.7
60gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome... 40 7.7
61gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 40 7.7
62gb|AC142455.4| Mus musculus BAC clone RP23-179B15 from chromosom... 40 7.7
63gb|AC007343.7| Homo sapiens chromosome 16 clone RP11-463J22, com... 40 7.7
64dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 7.7
65gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 7.7
66dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
67dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
68emb|AL929523.5| Zebrafish DNA sequence from clone CH211-250I3, c... 40 7.7
69gb|U29580.1|ECU29580 Escherichia coli K-12 genome; approximately... 40 7.7
70gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 7.7
71dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.7
72gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 7.7
73emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on ch... 40 7.7
74gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human... 40 7.7
75gb|CP000036.1| Shigella boydii Sb227, complete genome 40 7.7
76gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 7.7
77gb|M12843.1|ECOPYRG E.coli pyrG (complete cds) and eno (partial ... 40 7.7
78dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.7 
>ref|XM_468478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 393

 Score =  297 bits (150), Expect = 2e-77
 Identities = 301/350 (86%), Gaps = 1/350 (0%)
 Strand = Plus / Minus

                                                                       
Query: 216 cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 275
           |||||||| || || ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 389 cgcctatctgatgccaccgattcagcagaaaacaggtacttcacgcgagaaagaacagaa 330

                                                                       
Query: 276 tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 335
           ||   |||||| ||||| ||||| |||||||||||||| |||||||| ||||| |  |||
Sbjct: 329 tcgtgtgctgggtcatacggatgatccttggatgggatctccaatatagcaggaacgggc 270

                                                                       
Query: 336 ttgttgtagctatccaccagaaatctaatcatgtttgcaatatattggctgatgagcaca 395
            ||||||||||||||||||| || || |||||||| |||| ||||||||||||||| |||
Sbjct: 269 ctgttgtagctatccaccaggaaccttatcatgttcgcaacatattggctgatgagaaca 210

                                                                       
Query: 396 atagcaatatcctcccttgcagtaaattctttaaatgcatcttcaatctgtttcacctgt 455
           || ||||| |||||||||| ||| ||||| |||||||||||||| || ||||| | ||||
Sbjct: 209 attgcaatgtcctcccttgtagtgaattccttaaatgcatcttcgatttgtttga-ctgt 151

                                                                       
Query: 456 ggttttgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaacccc 515
            ||||||||||| |||| |||||||||||| || || | |||||||||||||||||| ||
Sbjct: 150 tgttttgttatcaacaataaggtaatttgtctttttcctcagatcaacattgccaactcc 91

                                                             
Query: 516 agccatcaaaaacccagtaacagtgtcctcatcagcgatgatggcgatga 565
           ||||| |||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 90  agccaacaaaaacccagtgaccgtgtcctcgtcggcgatgatggcgatga 41
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>gb|AY103927.1| Zea mays PCO061369 mRNA sequence
          Length = 866

 Score =  266 bits (134), Expect = 7e-68
 Identities = 297/350 (84%), Gaps = 1/350 (0%)
 Strand = Plus / Minus

                                                                       
Query: 216 cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 275
           ||||||||||| || ||||| || ||||| || ||||| ||||| ||||| || || || 
Sbjct: 594 cgcctatcagacgccaccgattctgcagagaacagatatttcactcgagagagcacagag 535

                                                                       
Query: 276 tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 335
           ||    |||||||||||||||||||||||||||||||| ||||  || |||||||  |||
Sbjct: 534 tcgtgcgctggatcatatggatggtccttggatgggatctccagaatagcagggacgggc 475

                                                                       
Query: 336 ttgttgtagctatccaccagaaatctaatcatgtttgcaatatattggctgatgagcaca 395
           ||||||||||||||||||||||| || |||||||| |||||||| || ||||||||||||
Sbjct: 474 ttgttgtagctatccaccagaaaccttatcatgttggcaatatactgactgatgagcaca 415

                                                                       
Query: 396 atagcaatatcctcccttgcagtaaattctttaaatgcatcttcaatctgtttcacctgt 455
           ||||||||||||||||| | |||||||||||| || ||||| || || ||||| | ||||
Sbjct: 414 atagcaatatcctccctcgtagtaaattctttgaacgcatcctcgatttgttt-aactgt 356

                                                                       
Query: 456 ggttttgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaacccc 515
            || ||||| || || || ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 355 cgtcttgttgtcgacgaggaggtagttggttttcttgcgcagatcaacattgccaacgcc 296

                                                             
Query: 516 agccatcaaaaacccagtaacagtgtcctcatcagcgatgatggcgatga 565
            |||||||| || ||||| || |||||||| || |||||||| |||||||
Sbjct: 295 ggccatcaagaagccagtgacggtgtcctcgtcggcgatgattgcgatga 246
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>gb|BT012798.1| Lycopersicon esculentum clone 113812R, mRNA sequence
          Length = 772

 Score =  176 bits (89), Expect = 5e-41
 Identities = 234/281 (83%), Gaps = 1/281 (0%)
 Strand = Plus / Minus

                                                                       
Query: 285 ggatcatatggatggtccttggatgggatttccaatatcgcagggattggcttgttgtag 344
           |||||||||||||||||||| || || || ||||| || || || ||||| |||||||| 
Sbjct: 430 ggatcatatggatggtcctttgaaggaatctccaaaatggctggaattggtttgttgtaa 371

                                                                       
Query: 345 ctatccaccagaaatctaatcatgtttgcaatatattggctgatgagcacaatagcaata 404
           ||||| |||| |||||| |||||||| || | |||||||||||| | ||| || || || 
Sbjct: 370 ctatcaaccaaaaatcttatcatgttggccacatattggctgatcaacactattgcgatg 311

                                                                       
Query: 405 tcctcccttgcagtaaattctttaaatgcatcttcaatctgtttcacctgtggttttgtt 464
           ||||| ||||  || ||||| ||||| |||||||||||||| |||| |||| |||||   
Sbjct: 310 tcctctcttgtggtgaattccttaaaagcatcttcaatctgcttca-ctgttgtttttga 252

                                                                       
Query: 465 atccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagccatcaa 524
           |||||||| |||||||||||||||| | | || ||||||||||||||| |||||||  ||
Sbjct: 251 atccacaataaggtaatttgttttcctcctcaaatcaacattgccaactccagccagtaa 192

                                                    
Query: 525 aaacccagtaacagtgtcctcatcagcgatgatggcgatga 565
           ||| |||||||  ||||||||||||||||| ||||| ||||
Sbjct: 191 aaatccagtaattgtgtcctcatcagcgatcatggcaatga 151
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>gb|DQ317309.1| Musa acuminata putative vacuolar ATP synthase subunit F mRNA,
           partial cds
          Length = 386

 Score =  168 bits (85), Expect = 1e-38
 Identities = 242/293 (82%), Gaps = 1/293 (0%)
 Strand = Plus / Minus

                                                                       
Query: 256 tcacacgagaaaggaccgaatcacttgctggatcatatggatggtccttggatgggattt 315
           |||| |||||||| ||||||||   ||| || ||||||||||| |||||||| || || |
Sbjct: 382 tcactcgagaaagaaccgaatcgtgtgcagggtcatatggatgatccttggagggaatct 323

                                                                       
Query: 316 ccaatatcgcagggattggcttgttgtagctatccaccagaaatctaatcatgtttgcaa 375
           |||| || || || |  || ||||||||||||||||||||||| |  |||||||||||||
Sbjct: 322 ccaagatagctggcacaggtttgttgtagctatccaccagaaaccgtatcatgtttgcaa 263

                                                                       
Query: 376 tatattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcat 435
           |||||||| | || ||||||| |||||||||||||||||  || || ||||| |||||||
Sbjct: 262 tatattggataatcagcacaacagcaatatcctcccttgaggtgaactctttgaatgcat 203

                                                                       
Query: 436 cttcaatctgtttcacctgtggttttgttatccacaagaaggtaatttgttttcttgcgc 495
           |||  ||   ||||| | || |||||    ||||||| |||||||||||| ||  | || 
Sbjct: 202 cttttatagctttca-cagtagtttttgagtccacaataaggtaatttgtctttctccgt 144

                                                                
Query: 496 agatcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatc 548
           |||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 143 agatcaacatcgccaactccagccatcaaaaatccagtaacagtgtcctcatc 91
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>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
              complete sequence
          Length = 138572

 Score =  121 bits (61), Expect = 3e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                          
Query: 211    ctcaacgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaagga 270
              |||| |||||||| || || || || ||||| |||||||| |||||||| ||||||||||
Sbjct: 117573 ctcatcgcctatctgacgccactgattcagcggaaaataggtacttcacgcgagaaagga 117514

                                                                          
Query: 271    ccgaatcacttgctggatcatatggatggtccttggatgggatttccaatatcgcaggga 330
              | |||||   |||||| ||||| ||||| ||||| ||||| || |||||||| ||||| |
Sbjct: 117513 cagaatcgtgtgctgggtcataaggatgatccttcgatggaatctccaatatagcaggaa 117454

                                                           
Query: 331    ttggcttgttgtagctatccaccagaaatctaatcatgtttgcaa 375
                ||  |||||||||||||||| ||||||||||||||||||||||
Sbjct: 117453 ccggtctgttgtagctatccacaagaaatctaatcatgtttgcaa 117409



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                          
Query: 461    tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 520
              ||||||| |||| ||| |||||||| || || | |||||||||||||||||| |||||||
Sbjct: 116190 tgttatcaacaataagataatttgtctttttcctcagatcaacattgccaactccagcca 116131

                                      
Query: 521    tcaaaaacccagtaacagtgtcct 544
               | |||||||||| || |||||||
Sbjct: 116130 actaaaacccagtcaccgtgtcct 116107



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                          
Query: 377    atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 436
              |||||| |||||||| ||||| ||||| |||||||||| ||| || || ||||| |||||
Sbjct: 116886 atattgactgatgagtacaattgcaatgtcctcccttgtagtgaactccttaaacgcatc 116827

                          
Query: 437    ttcaatctgttt 448
              |||||| |||||
Sbjct: 116826 ttcaatttgttt 116815
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 3e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                           
Query: 211     ctcaacgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaagga 270
               |||| |||||||| || || || || ||||| |||||||| |||||||| ||||||||||
Sbjct: 2501671 ctcatcgcctatctgacgccactgattcagcggaaaataggtacttcacgcgagaaagga 2501612

                                                                           
Query: 271     ccgaatcacttgctggatcatatggatggtccttggatgggatttccaatatcgcaggga 330
               | |||||   |||||| ||||| ||||| ||||| ||||| || |||||||| ||||| |
Sbjct: 2501611 cagaatcgtgtgctgggtcataaggatgatccttcgatggaatctccaatatagcaggaa 2501552

                                                            
Query: 331     ttggcttgttgtagctatccaccagaaatctaatcatgtttgcaa 375
                 ||  |||||||||||||||| ||||||||||||||||||||||
Sbjct: 2501551 ccggtctgttgtagctatccacaagaaatctaatcatgtttgcaa 2501507



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                           
Query: 461     tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 520
               ||||||| |||| ||| |||||||| || || | |||||||||||||||||| |||||||
Sbjct: 2500288 tgttatcaacaataagataatttgtctttttcctcagatcaacattgccaactccagcca 2500229

                                       
Query: 521     tcaaaaacccagtaacagtgtcct 544
                |||||||||||| || |||||||
Sbjct: 2500228 acaaaaacccagtcaccgtgtcct 2500205



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                           
Query: 377     atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 436
               |||||| |||||||| ||||| ||||| |||||||||| ||| || || ||||| |||||
Sbjct: 2500984 atattgactgatgagtacaattgcaatgtcctcccttgtagtgaactccttaaacgcatc 2500925

                           
Query: 437     ttcaatctgttt 448
               |||||| |||||
Sbjct: 2500924 ttcaatttgttt 2500913
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  119 bits (60), Expect = 1e-23
 Identities = 135/160 (84%)
 Strand = Plus / Minus

                                                                            
Query: 216      cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 275
                |||||||| || || ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 35448851 cgcctatctgatgccaccgattcagcagaaaacaggtacttcacgcgagaaagaacagaa 35448792

                                                                            
Query: 276      tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 335
                ||   |||||| ||||| ||||| |||||||||||||| |||||||| ||||| |  |||
Sbjct: 35448791 tcgtgtgctgggtcatacggatgatccttggatgggatctccaatatagcaggaacgggc 35448732

                                                        
Query: 336      ttgttgtagctatccaccagaaatctaatcatgtttgcaa 375
                 ||||||||||||||||||| || || |||||||| ||||
Sbjct: 35448731 ctgttgtagctatccaccaggaaccttatcatgttcgcaa 35448692



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 461      tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 520
                ||||||| |||| |||||||||||| || || | |||||||||||||||||| |||||||
Sbjct: 35447306 tgttatcaacaataaggtaatttgtctttttcctcagatcaacattgccaactccagcca 35447247

                                        
Query: 521      tcaaaaacccagtaacagtgtcct 544
                 |||||||||||| || |||||||
Sbjct: 35447246 acaaaaacccagtgaccgtgtcct 35447223



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                            
Query: 377      atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 436
                ||||||||||||||| ||||| ||||| |||||||||| ||| ||||| |||||||||||
Sbjct: 35448022 atattggctgatgagaacaattgcaatgtcctcccttgtagtgaattccttaaatgcatc 35447963

                            
Query: 437      ttcaatctgttt 448
                ||| || |||||
Sbjct: 35447962 ttcgatttgttt 35447951
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>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score =  119 bits (60), Expect = 1e-23
 Identities = 135/160 (84%)
 Strand = Plus / Minus

                                                                         
Query: 216   cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 275
             |||||||| || || ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 60372 cgcctatctgatgccaccgattcagcagaaaacaggtacttcacgcgagaaagaacagaa 60313

                                                                         
Query: 276   tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 335
             ||   |||||| ||||| ||||| |||||||||||||| |||||||| ||||| |  |||
Sbjct: 60312 tcgtgtgctgggtcatacggatgatccttggatgggatctccaatatagcaggaacgggc 60253

                                                     
Query: 336   ttgttgtagctatccaccagaaatctaatcatgtttgcaa 375
              ||||||||||||||||||| || || |||||||| ||||
Sbjct: 60252 ctgttgtagctatccaccaggaaccttatcatgttcgcaa 60213



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                         
Query: 461   tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 520
             ||||||| |||| |||||||||||| || || | |||||||||||||||||| |||||||
Sbjct: 58827 tgttatcaacaataaggtaatttgtctttttcctcagatcaacattgccaactccagcca 58768

                                     
Query: 521   tcaaaaacccagtaacagtgtcct 544
              |||||||||||| || |||||||
Sbjct: 58767 acaaaaacccagtgaccgtgtcct 58744



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                         
Query: 377   atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 436
             ||||||||||||||| ||||| ||||| |||||||||| ||| ||||| |||||||||||
Sbjct: 59543 atattggctgatgagaacaattgcaatgtcctcccttgtagtgaattccttaaatgcatc 59484

                         
Query: 437   ttcaatctgttt 448
             ||| || |||||
Sbjct: 59483 ttcgatttgttt 59472
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>ref|NM_116496.3| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
           mechanism / hydrogen-transporting ATPase, rotational
           mechanism AT4G02620 mRNA, complete cds
          Length = 636

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 443 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 384

                                                                  
Query: 300 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 383 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 329



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 499 tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatcagcgatgatg 558
           |||||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||| || 
Sbjct: 185 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcctcatcggcgatcatt 126

                  
Query: 559 gcgatga 565
           |||||||
Sbjct: 125 gcgatga 119
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>ref|NM_116495.2| Arabidopsis thaliana tryptophan synthase AT4G02610 mRNA, complete cds
          Length = 1216

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                        
Query: 240  gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
            |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 1080 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 1139

                                                                   
Query: 300  tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
            |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 1140 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 1194
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>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM,
             complete sequence
          Length = 113566

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                         
Query: 240   gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
             |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 61653 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 61594

                                                                    
Query: 300   tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
             |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 61593 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 61539



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 499   tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcct 544
             |||||||| ||||| |||||||||||||| |||  |||||||||||
Sbjct: 60724 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcct 60679
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>gb|AY117236.1| Arabidopsis thaliana putative vacuolar ATPase (At4g02620) mRNA,
           complete cds
          Length = 418

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 365 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 306

                                                                  
Query: 300 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 305 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 251



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 499 tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatcagcgatgatg 558
           |||||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||| || 
Sbjct: 107 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcctcatcggcgatcatt 48

                  
Query: 559 gcgatga 565
           |||||||
Sbjct: 47  gcgatga 41
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>gb|AY065277.1| Arabidopsis thaliana putative vacuolar ATPase (At4g02620) mRNA,
           complete cds
          Length = 619

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 419 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 360

                                                                  
Query: 300 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 359 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 305



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 499 tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatcagcgatgatg 558
           |||||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||| || 
Sbjct: 161 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcctcatcggcgatcatt 102

                  
Query: 559 gcgatga 565
           |||||||
Sbjct: 101 gcgatga 95
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>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                          
Query: 240    gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
              |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 185092 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 185151

                                                                     
Query: 300    tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
              |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 185152 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 185206



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 499    tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcct 544
              |||||||| ||||| |||||||||||||| |||  |||||||||||
Sbjct: 186021 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcct 186066
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>emb|BX828935.1|CNS0A3F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL52ZE03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 612

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 443 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 384

                                                                  
Query: 300 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 383 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 329



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 499 tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatcagcgatgatg 558
           |||||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||| || 
Sbjct: 185 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcctcatcggcgatcatt 126

                  
Query: 559 gcgatga 565
           |||||||
Sbjct: 125 gcgatga 119
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>gb|AY084277.1| Arabidopsis thaliana clone 10207 mRNA, complete sequence
          Length = 600

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 299
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 440 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 381

                                                                  
Query: 300 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 354
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 380 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 326



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 499 tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatcagcgatgatg 558
           |||||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||| || 
Sbjct: 182 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcctcatcggcgatcatt 123

                  
Query: 559 gcgatga 565
           |||||||
Sbjct: 122 gcgatga 116
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>gb|DQ198167.1| Nicotiana tabacum cultivar Samsun NN vacuolar ATP-related protein
           mRNA, partial cds
          Length = 455

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 285 ggatcatatggatggtccttggatgggatttccaatatcgcagggattggcttgttgtag 344
           |||||||||||||||||||| || || || ||||  || || || ||||| || ||||||
Sbjct: 123 ggatcatatggatggtcctttgaaggaatctccagaatggctggaattggtttattgtag 64

                                                       
Query: 345 ctatccaccagaaatctaatcatgtttgcaatatattggctgat 388
           ||||| ||||  ||||| ||||||||||| | ||||||||||||
Sbjct: 63  ctatcaaccaagaatctgatcatgtttgcgacatattggctgat 20
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>dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375b,
            complete sequence
          Length = 61653

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                        
Query: 285  ggatcatatggatggtccttggatgggatttccaatatcgcagggattggcttgttgtag 344
            |||||||| || ||||| ||||| || || |||||||| ||||| |  ||||||||||||
Sbjct: 1259 ggatcataagggtggtctttggagggaatctccaatattgcaggaacaggcttgttgtag 1318

                                           
Query: 345  ctatccaccagaaatctaatcatgtttgcaa 375
            ||||| || ||||| || ||||| |||||||
Sbjct: 1319 ctatcaactagaaaccttatcatatttgcaa 1349



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 399  gcaatatcctcccttgcagtaaattctttaaatgcatcttcaatctgttt 448
            |||||||| |||||||  || || ||||| |||||||||||||| |||||
Sbjct: 1637 gcaatatcttcccttgttgtgaactctttgaatgcatcttcaatttgttt 1686
to top
>ref|XM_471237.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 84

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 524 aaaacccagtaacagtgtcctcatcagcgatgatggcgatga 565
           |||||||||| || |||||||| || ||||||||||||||||
Sbjct: 82  aaaacccagtcaccgtgtcctcgtcggcgatgatggcgatga 41
to top
>emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 in linkage group 20
              Contains the gene for a novel protein similar to vertebrate
              bromodomain containing 1 (BRD1), the gene for a novel
              protein similar to vertebrate asparagine-linked
              glycosylation 12 homolog (yeast,
              alpha-1,6-mannosyltransferase) (ALG12), the gene for a
              novel protein similar to vertebrate solute carrier family 6
              (neurotransmitter transporter, GABA), member 1 (SLC6A1),
              the gene for a novel protein similar to vertebrate zinc
              finger, BED domain containing 4 (ZBED4), the gene for a
              novel protein similar to vertebrate cysteine-rich with
              EGF-like domains 1 (CRELD1) (zgc:66383) and three CpG
              islands, complete sequence
          Length = 218596

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 109    cacaacagaatggcatgaataatttaatacagat 142
              ||||||||||||||| ||||||| ||||||||||
Sbjct: 171365 cacaacagaatggcaggaataatataatacagat 171398
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>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4 Contains
              the gene for a novel protein similar to vertebrate TAFA
              protein 5 (TAFA5) and a CpG island, complete sequence
          Length = 174359

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 109    cacaacagaatggcatgaataatttaatacagat 142
              ||||||||||||||| ||||||| ||||||||||
Sbjct: 136790 cacaacagaatggcaggaataatataatacagat 136757
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>ref|XM_969923.1| PREDICTED: Tribolium castaneum similar to CG8210-PA (LOC663894),
           mRNA
          Length = 372

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                    
Query: 279 cttgctgg-atcatatggatggtccttggatgggatttccaatatcgcagggattgg 334
           |||||||| |||||||||||||||||| || || |||||||| |  |||||||||||
Sbjct: 318 cttgctggcatcatatggatggtcctttgacggaatttccaagacagcagggattgg 262
to top
>ref|XM_715957.1| Candida albicans SC5314 vacuolar membrane ATPase subunit F
           (CaO19_8424), mRNA
          Length = 369

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 285 ggatcatatggatggtccttggatgggatttc 316
           |||||||| |||||||| ||||||||||||||
Sbjct: 320 ggatcatacggatggtctttggatgggatttc 289
to top
>gb|AC006974.2| Homo sapiens PAC clone RP5-958B11 from 7, complete sequence
          Length = 90241

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 13    tcccttgttctaatatccaactcc 36
             ||||||||||||||||||||||||
Sbjct: 58332 tcccttgttctaatatccaactcc 58309
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>gb|AY426266.1| Solanum tarijense blight resistance protein T118 gene, partial cds
          Length = 3641

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 234  gagtcagcagaaaatagatact 255
            ||||||||||||||||||||||
Sbjct: 1165 gagtcagcagaaaatagatact 1144
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>gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, region 90B-90C, BAC clone
              BACR11L13, complete sequence
          Length = 171612

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 358    atctaatcatgtttgcaatata 379
              ||||||||||||||||||||||
Sbjct: 144003 atctaatcatgtttgcaatata 144024
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>gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone
             BACR21K03, complete sequence
          Length = 178100

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 358   atctaatcatgtttgcaatata 379
             ||||||||||||||||||||||
Sbjct: 78516 atctaatcatgtttgcaatata 78537
to top
>gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56 of 118 of the complete
              sequence
          Length = 253101

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 358    atctaatcatgtttgcaatata 379
              ||||||||||||||||||||||
Sbjct: 178660 atctaatcatgtttgcaatata 178681
to top
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 419    aaattctttaaatgcatcttc 439
              |||||||||||||||||||||
Sbjct: 357400 aaattctttaaatgcatcttc 357420
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>ref|XM_445592.1| Candida glabrata CBS138, CAGL0D04048g partial mRNA
          Length = 357

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 288 tcatatggatggtccttggatgggatttc 316
           ||||||||||||||||| ||||| |||||
Sbjct: 305 tcatatggatggtccttagatggaatttc 277
to top
>emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on chromosome 6q22.2-23.1
             Contains two novel genes and the 5' end of the PTPRK gene
             for protein tyrosine phosphatase, receptor type K
             (R-PTP-KAPPA) and a CpG island, complete sequence
          Length = 112604

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   taatttaatacagatacatgg 148
             |||||||||||||||||||||
Sbjct: 81094 taatttaatacagatacatgg 81074
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>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 288    tcatatggatggtccttggatgggatttc 316
              ||||||||||||||||| ||||| |||||
Sbjct: 403187 tcatatggatggtccttagatggaatttc 403215
to top
>emb|BX649557.8| Zebrafish DNA sequence from clone DKEYP-61G11 in linkage group 3,
             complete sequence
          Length = 163934

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 418   taaattctttaaatgcatcttcaat 442
             |||||||||||||| ||||||||||
Sbjct: 35643 taaattctttaaattcatcttcaat 35667
to top
>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9,
             complete sequence
          Length = 178929

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    gtaaaaaattattacattaac 66
             |||||||||||||||||||||
Sbjct: 84173 gtaaaaaattattacattaac 84193
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>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9,
              complete sequence
          Length = 160823

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 38     aaagaagagtaaaaaattattacat 62
              |||| ||||||||||||||||||||
Sbjct: 119025 aaagtagagtaaaaaattattacat 119049
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>gb|AC149334.2| Phakopsora pachyrhizi clone JGIAFNA-25D12, complete sequence
          Length = 35801

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    caaaagaagagtaaaaaatta 56
             |||||||||||||||||||||
Sbjct: 22178 caaaagaagagtaaaaaatta 22198
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>gb|AC147718.1| Gallus gallus BAC clone CH261-18A20 from chromosome unknown, complete
             sequence
          Length = 185989

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    aaagaagagtaaaaaattatt 58
             |||||||||||||||||||||
Sbjct: 28843 aaagaagagtaaaaaattatt 28823
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 2867837 tgcatcttcaatctgtttca 2867856
to top
>ref|XM_715837.1| Candida albicans SC5314 vacuolar H(+)-ATPase (CaO19_806), mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 285 ggatcatatggatggtccttggatgggatttc 316
           |||||||| ||||| || ||||||||||||||
Sbjct: 320 ggatcatacggatgatctttggatgggatttc 289
to top
>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 246705

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   gcagtaaattctttaaatgc 433
             ||||||||||||||||||||
Sbjct: 83599 gcagtaaattctttaaatgc 83618
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>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence
          Length = 236274

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aacccgctggtccaatccag 83
             ||||||||||||||||||||
Sbjct: 29718 aacccgctggtccaatccag 29699
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>emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 in linkage group 11,
             complete sequence
          Length = 199426

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    aagagtaaaaaattattacattaa 65
             |||| |||||||||||||||||||
Sbjct: 38161 aagactaaaaaattattacattaa 38184
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>gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosome 14, complete
            sequence
          Length = 226611

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 126  aataatttaatacagatacatgga 149
            |||||||||||| |||||||||||
Sbjct: 7854 aataatttaataaagatacatgga 7877
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>gb|AC013454.6|ATAC013454 Arabidopsis thaliana chromosome III BAC F2O10 genomic sequence,
             complete sequence
          Length = 62271

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    gaagagtaaaaaattattac 60
             ||||||||||||||||||||
Sbjct: 25173 gaagagtaaaaaattattac 25192
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>gb|AC107769.7| Mus musculus chromosome 16, clone RP23-130N20, complete sequence
          Length = 192682

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    aacccgctggtccaatccag 83
             ||||||||||||||||||||
Sbjct: 42044 aacccgctggtccaatccag 42063
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 3183669 tgcatcttcaatctgtttca 3183688
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 3062671 tgcatcttcaatctgtttca 3062690
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>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six
             novel pseudogenes, the FAM27B gene for family with
             sequence similarity 27, member B, a pseudogene similar to
             part of ribosomal protein L10 (RPL10) and four CpG
             islands, complete sequence
          Length = 194246

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tgttttcctgtttcccttgt 20
             ||||||||||||||||||||
Sbjct: 29056 tgttttcctgtttcccttgt 29075
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>emb|AL589645.10| Human DNA sequence from clone RP11-251H13 on chromosome 9, complete
             sequence
          Length = 48323

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   tcacttgctggatcatatgg 295
             ||||||||||||||||||||
Sbjct: 42069 tcacttgctggatcatatgg 42088
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>emb|AL591030.6| Human DNA sequence from clone RP11-35J1 on chromosome 6 Contains putative
              novel gene, complete sequence
          Length = 152361

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 42     aagagtaaaaaattattacattaa 65
              |||||||||||||||||| |||||
Sbjct: 127495 aagagtaaaaaattattatattaa 127518
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>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the
             FAM27C gene for family with sequence similarity 27, member
             C, three novel genes, five novel pseudogenes and six CpG
             islands, complete sequence
          Length = 202081

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tgttttcctgtttcccttgt 20
             ||||||||||||||||||||
Sbjct: 93587 tgttttcctgtttcccttgt 93606
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 2906237 tgcatcttcaatctgtttca 2906256
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>gb|DQ443526.1| Agrobacterium vitis NADP-me gene, partial cds; AvsR (avsR), AvsI
            (avsI), and hypothetical protein genes, complete cds; and
            hypothetical protein gene, partial cds
          Length = 5445

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 490  ttgcgcagatcaacattgcc 509
            ||||||||||||||||||||
Sbjct: 4592 ttgcgcagatcaacattgcc 4611
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 2906871 tgcatcttcaatctgtttca 2906890
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>dbj|AK162877.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230078F09 product:hypothetical
           protein, full insert sequence
          Length = 2700

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtaaaaaattattacatta 64
           ||||||||||||||||||||
Sbjct: 896 agtaaaaaattattacatta 877
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>gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168615

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   ggcatgaataatttaatacagata 143
             |||||| |||||||||||||||||
Sbjct: 20545 ggcatgcataatttaatacagata 20522
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    acagatacatggagcaggaa 156
              ||||||||||||||||||||
Sbjct: 404286 acagatacatggagcaggaa 404267
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>gb|AC171739.3| Cavia porcellus clone CH234-497P15, complete sequence
          Length = 158596

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ccaaaagaagagtaaaaaat 54
             ||||||||||||||||||||
Sbjct: 23060 ccaaaagaagagtaaaaaat 23041
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>gb|AC018553.6| Homo sapiens chromosome 16 clone RP11-434E6, complete sequence
          Length = 172315

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   tcacctgtggttttgttatc 467
             ||||||||||||||||||||
Sbjct: 86894 tcacctgtggttttgttatc 86875
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>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence
          Length = 229269

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 136    tacagatacatggagcaggaagtc 159
              |||| |||||||||||||||||||
Sbjct: 194644 tacatatacatggagcaggaagtc 194621
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>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 136   tacagatacatggagcaggaagtc 159
             |||| |||||||||||||||||||
Sbjct: 10638 tacatatacatggagcaggaagtc 10615
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>gb|AC142455.4| Mus musculus BAC clone RP23-179B15 from chromosome 14, complete
             sequence
          Length = 207514

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aataatttaatacagatacatgga 149
             |||||||||||| |||||||||||
Sbjct: 97536 aataatttaataaagatacatgga 97513
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>gb|AC007343.7| Homo sapiens chromosome 16 clone RP11-463J22, complete sequence
          Length = 186732

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   tcacctgtggttttgttatc 467
             ||||||||||||||||||||
Sbjct: 24985 tcacctgtggttttgttatc 24966
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 291     tatggatggtccttggatgg 310
               ||||||||||||||||||||
Sbjct: 2098945 tatggatggtccttggatgg 2098964
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 2862541 tgcatcttcaatctgtttca 2862560
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0005A05
          Length = 190834

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    acagatacatggagcaggaa 156
              ||||||||||||||||||||
Sbjct: 156124 acagatacatggagcaggaa 156105
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   acagatacatggagcaggaa 156
             ||||||||||||||||||||
Sbjct: 44487 acagatacatggagcaggaa 44468
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>emb|AL929523.5| Zebrafish DNA sequence from clone CH211-250I3, complete sequence
          Length = 133678

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 419    aaattctttaaatgcatcttcaat 442
              ||||||||||||| ||||||||||
Sbjct: 122531 aaattctttaaattcatcttcaat 122554
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>gb|U29580.1|ECU29580 Escherichia coli K-12 genome; approximately 62 minute region
          Length = 13234

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 431  tgcatcttcaatctgtttca 450
            ||||||||||||||||||||
Sbjct: 6080 tgcatcttcaatctgtttca 6099
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 3697912 tgcatcttcaatctgtttca 3697931
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 3630614 tgcatcttcaatctgtttca 3630633
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 2764195 tgcatcttcaatctgtttca 2764214
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>emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on chromosome 2, complete
              sequence
          Length = 191603

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     agtaaaaaattattacatta 64
              ||||||||||||||||||||
Sbjct: 173631 agtaaaaaattattacatta 173650
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>gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human ortholog 4q31.21,
             complete sequence
          Length = 142956

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    aaagaagagtaaaaaattattaca 61
             ||||||||| ||||||||||||||
Sbjct: 45789 aaagaagagaaaaaaattattaca 45812
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 2664928 tgcatcttcaatctgtttca 2664947
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 431     tgcatcttcaatctgtttca 450
               ||||||||||||||||||||
Sbjct: 3077942 tgcatcttcaatctgtttca 3077961
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>gb|M12843.1|ECOPYRG E.coli pyrG (complete cds) and eno (partial cds) mRNAs encoding CTP
            synthetase and enolase, respectively
          Length = 2442

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 431  tgcatcttcaatctgtttca 450
            ||||||||||||||||||||
Sbjct: 1802 tgcatcttcaatctgtttca 1783
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>dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1786D2
          Length = 150409

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   ggttttgttatccacaagaa 475
             ||||||||||||||||||||
Sbjct: 68672 ggttttgttatccacaagaa 68653


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,100,947
Number of Sequences: 3902068
Number of extensions: 6100947
Number of successful extensions: 131429
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130873
Number of HSP's gapped (non-prelim): 550
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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