| Clone Name | rbags4e03 |
|---|---|
| Clone Library Name | barley_pub |
>PEL8_ARATH (Q9M8Z8) Probable pectate lyase 8 precursor (EC 4.2.2.2)| Length = 416 Score = 34.7 bits (78), Expect = 0.27 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%) Frame = -2 Query: 662 FSGDLQVVIIQDFKWCSFL------LKLHRLYGGTHLTVNGVSSIRVQSIEVAEVVPNGD 501 F D+ + + Q+ SF + +H + G LT+ V++I V I V + P G+ Sbjct: 139 FKRDMVITLKQELIMNSFKTIDGRGVNVH-IANGACLTIQYVTNIIVHGIHVHDCKPTGN 197 Query: 500 VFVQSDGEHFGF--SPDQILGSACRSRFLQLDRCAVSSCWISTMDRRRMILRRPASVHLV 327 V+S H+GF D S S + +D ++S+C +D ++ A Sbjct: 198 AMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVD---AVMSSTAITVSN 254 Query: 326 DFFCHRS 306 +FF H + Sbjct: 255 NFFTHHN 261
>PEL5_ARATH (Q9FXD8) Probable pectate lyase 5 precursor (EC 4.2.2.2)| Length = 408 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -2 Query: 584 GGTHLTVNGVSSIRVQSIEVAEVVPNGDVFVQSDGEHFGF--SPDQILGSACRSRFLQLD 411 GG +TV V++I + + + + G+ +V+ H+G+ + D S + +D Sbjct: 162 GGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVD 221 Query: 410 RCAVSSC 390 C++S+C Sbjct: 222 HCSLSNC 228
>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 423 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = -2 Query: 602 KLHRLYGGTHLTVNGVSSIRVQSIEVAEVV-PNGDVFVQSDGEHFGF 465 K+HRL GTH + + +++ +++ +VV PN D + + GE G+ Sbjct: 57 KIHRLLLGTHTSDESPNYLQIADVQIPKVVAPNPDDYDEERGEIGGY 103
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.8 bits (68), Expect = 3.9 Identities = 22/87 (25%), Positives = 37/87 (42%) Frame = +1 Query: 16 ATLLHAVLCMADEETTAKFTLVPARPLCCDSTTACL*TSTTQLLQPHTGVHAEKLHGGWL 195 AT L + A + T FT +P+ L T T+Q PH +H Sbjct: 3020 ATTLPVLTSTATKSTATSFTPIPSSTLGT--------TGTSQNRPPHPMATMSTIHPSST 3071 Query: 196 PHSSNLFHLLTTCQKTSEWSNPIAVPS 276 P +++ +LTT T+ ++ ++ PS Sbjct: 3072 PETTHTSTVLTTKATTTRATSSMSTPS 3098
>CXX_CONTE (Q5I4E6) Conotoxin Gla-TxX precursor| Length = 82 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = +1 Query: 13 AATLLHAVLCMADEETTAKFTLVPARPLCCDSTTACL*TSTTQLLQPHTGVHAEKLHG 186 A ++ V+C D E +++F P C + T C Q ++P + A+K +G Sbjct: 16 ALGMVATVICSCDSEFSSEFCERPEESCSCSTHTCCHWARRDQCMKPQRCISAQKGNG 73
>PEL14_ARATH (Q9SVQ6) Putative pectate lyase 14 precursor (EC 4.2.2.2)| Length = 418 Score = 30.8 bits (68), Expect = 3.9 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%) Frame = -2 Query: 662 FSGDLQVVIIQDFKWCSFL------LKLHRLYGGTHLTVNGVSSIRVQSIEVAEVVPNGD 501 F D+ + + Q+ SF + +H + GG LTV V++I + I + + G+ Sbjct: 141 FKRDMVITLSQELIMNSFKTIDGRGVNVH-IAGGACLTVQYVTNIIIHGINIHDCKRTGN 199 Query: 500 VFVQSDGEHFGF--SPDQILGSACRSRFLQLDRCAVSSC 390 V+S H+G+ D S S + +D ++SSC Sbjct: 200 AMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSC 238
>OR2T5_HUMAN (Q6IEZ7) Olfactory receptor 2T5 (Olfactory receptor OR1-62)| Length = 315 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 646 RLLLYKISSGAVFFLSYIGCMEAHT*R*MVCHQ*EFNQLKWQRWCLTATSLCNLMGSTSG 467 ++ LY +G+ FFL + + +CH + L R CL S C +GS G Sbjct: 104 QMFLYLTLAGSEFFLLATMAYDRYV---AICHPLRYPVLMNHRVCLFLASGCWFLGSVDG 160 Query: 466 FLPT 455 F+ T Sbjct: 161 FMLT 164
>O2T29_HUMAN (Q8NH02) Olfactory receptor 2T29| Length = 315 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 646 RLLLYKISSGAVFFLSYIGCMEAHT*R*MVCHQ*EFNQLKWQRWCLTATSLCNLMGSTSG 467 ++ LY +G+ FFL + + +CH + L R CL S C +GS G Sbjct: 104 QMFLYLTLAGSEFFLLATMAYDRYV---AICHPLRYPVLMNHRVCLFLASGCWFLGSVDG 160 Query: 466 FLPT 455 F+ T Sbjct: 161 FMLT 164
>PEL15_ARATH (Q944R1) Probable pectate lyase 15 precursor (EC 4.2.2.2) (Pectate| lyase A11) Length = 470 Score = 30.4 bits (67), Expect = 5.1 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Frame = -2 Query: 647 QVVIIQDFKWCSFLLKLHRLYGGTHLTVNGVSSIRVQSIEVAEVVPNGDVFVQSDGEHFG 468 Q +I+ FK + G +T+ ++++ + + + + P G+ V+S HFG Sbjct: 203 QELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFG 262 Query: 467 F--SPDQILGSACRSRFLQLDRCAVSSC 390 + D S S + +D ++S C Sbjct: 263 WRTMADGDAVSIFGSSHIWIDHNSLSHC 290
>AROB_GEOSL (Q74BL6) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 362 Score = 29.6 bits (65), Expect = 8.7 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%) Frame = -2 Query: 527 VAEVVPNGDVFVQSDGEHFGFSPDQI---LGSACRSRFLQLDRCAVSSCWISTMDRRRMI 357 +AEV+ G V DG+ F F + LG ++ + RC W+ D R Sbjct: 185 LAEVIKYGVVL---DGKFFAFLEQNVSALLGRDRQTLVRAITRCCALKAWVVEQDERETG 241 Query: 356 LRRPASVHLVDFFCHRSRRLPFHT--LA*EGTAIGLLHSLV 240 LR A ++ F H L +T L E AIG++ + V Sbjct: 242 LR--AVLNYGHTFGHAVEALTGYTAVLHGEAVAIGMVRAAV 280
>Y335B_MYCGE (Q9ZB73) Hypothetical protein MG335.2| Length = 341 Score = 29.6 bits (65), Expect = 8.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 395 KKRHSGLAEEIYCGRQNRESGREKTR 472 KK H+ LA E+YC +QN G+ + + Sbjct: 54 KKEHNNLAIEVYCDKQNEGIGKVRDK 79
>GLYA_METKA (Q8TZ19) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 428 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -1 Query: 426 ISSARPLCRFFLLDFDDGQKTHDPSPTR 343 + SA LC LL +DD K+HDPS R Sbjct: 332 LESANILCNKNLLPWDDESKSHDPSGIR 359 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,268,138 Number of Sequences: 219361 Number of extensions: 2179719 Number of successful extensions: 5440 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5439 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)