>gb|BT019044.1| Zea mays clone Contig565.F mRNA sequence
          Length = 879

 Score =  129 bits (65), Expect = 1e-26
 Identities = 167/201 (83%)
 Strand = Plus / Minus

                                                                       
Query: 469 ccgaagtgctccccatcagattgcacaaagacgtcgccgttaggcaccacctctgccact 528
           ||||| ||||| || |||||||||||||||||| | ||| ||| |||||||||||| |||
Sbjct: 546 ccgaaatgctctccgtcagattgcacaaagacgccaccgctagccaccacctctgctact 487

                                                                       
Query: 529 tcaattgattgaactcttattgatgacacaccattcaccgttaagtgtgtgcctccatac 588
           ||||||||||| || || ||||| || ||||||||||| | ||  ||||| |||||||| 
Sbjct: 486 tcaattgattggaccctcattgacgaaacaccattcactgatagatgtgtacctccatag 427

                                                                       
Query: 589 agcctatgtagcttaagaagaaaactgcaccacttgaaatcttgtataataacaacctga 648
           ||||| |||||||| |||| |||   | |||| ||||||||||| | ||||||||||| |
Sbjct: 426 agcctgtgtagcttcagaataaagtcgtaccatttgaaatcttgaagaataacaacctca 367

                                
Query: 649 aggtcaccgctaaaaggatca 669
           ||||  || ||||| ||||||
Sbjct: 366 aggttgccactaaacggatca 346

>gb|AY104898.1| Zea mays PCO078090 mRNA sequence
          Length = 1289

 Score =  121 bits (61), Expect = 3e-24
 Identities = 166/201 (82%)
 Strand = Plus / Minus

                                                                        
Query: 469  ccgaagtgctccccatcagattgcacaaagacgtcgccgttaggcaccacctctgccact 528
            ||||| ||||| || |||||||||||||||||| | ||| ||| | |||||||||| |||
Sbjct: 1056 ccgaaatgctctccgtcagattgcacaaagacgccaccgctagccgccacctctgctact 997

                                                                        
Query: 529  tcaattgattgaactcttattgatgacacaccattcaccgttaagtgtgtgcctccatac 588
            ||||||||||| || || ||||| || ||||||||||| | ||  ||||| |||||||| 
Sbjct: 996  tcaattgattggaccctcattgacgaaacaccattcactgatagatgtgtacctccatag 937

                                                                        
Query: 589  agcctatgtagcttaagaagaaaactgcaccacttgaaatcttgtataataacaacctga 648
            ||||| |||||||| |||| |||   | |||| ||||||||||| | ||||||||||| |
Sbjct: 936  agcctgtgtagcttcagaataaagtcgtaccatttgaaatcttgaagaataacaacctca 877

                                 
Query: 649  aggtcaccgctaaaaggatca 669
            ||||  || ||||| ||||||
Sbjct: 876  aggttgccactaaacggatca 856

>dbj|AK101342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J23, full
            insert sequence
          Length = 1281

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                        
Query: 520  tctgccacttcaattgattgaactcttattgatgacacaccattcaccgttaagtgtgtg 579
            ||||| |||||||| || ||||||||||| |||||||||||| |||| | ||  || || 
Sbjct: 1016 tctgctacttcaatcgactgaactcttatcgatgacacaccagtcactgatagatgagtt 957

                                                                        
Query: 580  cctccatacagcctatgtagcttaagaagaaaactgcaccacttgaaatcttgtataata 639
            ||||||||||  ||||| ||||| || || |||     ||| ||||||||||| | ||||
Sbjct: 956  cctccatacaatctatgaagcttgagcaggaaatcatgccatttgaaatcttgaagaata 897

                                          
Query: 640  acaacctgaaggtcaccgctaaaaggatca 669
            || |||| ||||||||| |  |||||||||
Sbjct: 896  acgacctcaaggtcacccccgaaaggatca 867



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                        
Query: 412  tctagctgaagaaatctactgcggcaggcagaaccgagaatctggtcgggagaaaacccg 471
            |||||| ||||||||| |||||  | || ||||| || ||| |||| || ||||||||  
Sbjct: 1123 tctagcagaagaaatcaactgcaccgggaagaactgaaaatttggttggaagaaaaccaa 1064

                                        
Query: 472  aagtgctccccatcagattgcacaaaga 499
            || |||||||||||||||||||||||||
Sbjct: 1063 aa-tgctccccatcagattgcacaaaga 1037

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                           
Query: 412     tctagctgaagaaatctactgcggcaggcagaaccgagaatctggtcgggagaaaacccg 471
               |||||| ||||||||| |||||  | || ||||| || ||| |||| || ||||||||  
Sbjct: 1431478 tctagcagaagaaatcaactgcaccgggaagaactgaaaatttggttggaagaaaaccaa 1431419

                                           
Query: 472     aagtgctccccatcagattgcacaaaga 499
               || |||||||||||||||||||||||||
Sbjct: 1431418 aa-tgctccccatcagattgcacaaaga 1431392

>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                         
Query: 412   tctagctgaagaaatctactgcggcaggcagaaccgagaatctggtcgggagaaaacccg 471
             |||||| ||||||||| |||||  | || ||||| || ||| |||| || ||||||||  
Sbjct: 92981 tctagcagaagaaatcaactgcaccgggaagaactgaaaatttggttggaagaaaaccaa 92922

                                         
Query: 472   aagtgctccccatcagattgcacaaaga 499
             || |||||||||||||||||||||||||
Sbjct: 92921 aa-tgctccccatcagattgcacaaaga 92895

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                           
Query: 412     tctagctgaagaaatctactgcggcaggcagaaccgagaatctggtcgggagaaaacccg 471
               |||||| ||||||||| |||||  | || ||||| || ||| |||| || ||||||||  
Sbjct: 1431476 tctagcagaagaaatcaactgcaccgggaagaactgaaaatttggttggaagaaaaccaa 1431417

                                           
Query: 472     aagtgctccccatcagattgcacaaaga 499
               || |||||||||||||||||||||||||
Sbjct: 1431416 aa-tgctccccatcagattgcacaaaga 1431390

>emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chromosome 1 Contains the
             3' end of the SMYD3 gene for SET and MYND domain
             containing 3 and a CpG island, complete sequence
          Length = 85198

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 599   gcttaagaagaaaactgcacca 620
             ||||||||||||||||||||||
Sbjct: 68399 gcttaagaagaaaactgcacca 68378

>gb|AC149577.3| Medicago truncatula chromosome 2 BAC clone mth2-13b10, complete
             sequence
          Length = 126904

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     acaagaagcagccacattattg 27
             ||||||||||||||||||||||
Sbjct: 51155 acaagaagcagccacattattg 51176

>gb|AC093701.4| Homo sapiens BAC clone RP11-1252L15 from 7, complete sequence
          Length = 51166

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   gcttaagaagaaaactgcac 618
             ||||||||||||||||||||
Sbjct: 39249 gcttaagaagaaaactgcac 39268

>gb|AC123066.4| Mus musculus BAC clone RP23-262I13 from chromosome 19, complete sequence
          Length = 206333

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    gaaatccaacaggaagaaac 401
              ||||||||||||||||||||
Sbjct: 112202 gaaatccaacaggaagaaac 112183

>ref|XM_388523.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08347.1)
           partial mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 acatcgacgactcagctgct 146
           ||||||||||||||||||||
Sbjct: 35  acatcgacgactcagctgct 54

>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 316     cagaagaaatcgaccaggtgaaca 339
               ||||||||||||||||| ||||||
Sbjct: 1868578 cagaagaaatcgaccagttgaaca 1868601

>ref|XM_790346.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9779-PA
           (LOC590752), partial mRNA
          Length = 250

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 518 cctctgccacttcaattgat 537
           ||||||||||||||||||||
Sbjct: 88  cctctgccacttcaattgat 69

>emb|BX649598.17| Zebrafish DNA sequence from clone CH211-214P12 in linkage group 18,
             complete sequence
          Length = 213741

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   ccccatcagattgcacaaag 498
             ||||||||||||||||||||
Sbjct: 39940 ccccatcagattgcacaaag 39921

>emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 in linkage group 18,
             complete sequence
          Length = 215723

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   ccccatcagattgcacaaag 498
             ||||||||||||||||||||
Sbjct: 77628 ccccatcagattgcacaaag 77609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,328,783
Number of Sequences: 3902068
Number of extensions: 5328783
Number of successful extensions: 90996
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90872
Number of HSP's gapped (non-prelim): 124
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)