ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3o14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185075.1| Oryza sativa (japonica cultivar-group), mRNA 174 2e-40
2ref|XM_507356.1| PREDICTED Oryza sativa (japonica cultivar-group... 172 7e-40
3ref|XM_476865.1| Oryza sativa (japonica cultivar-group), mRNA 172 7e-40
4ref|XM_507355.1| PREDICTED Oryza sativa (japonica cultivar-group... 172 7e-40
5ref|XM_507354.1| PREDICTED Oryza sativa (japonica cultivar-group... 172 7e-40
6ref|XM_506197.2| PREDICTED Oryza sativa (japonica cultivar-group... 172 7e-40
7dbj|AK104504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
8dbj|AK104629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
9dbj|AK104447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
10dbj|AK060963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
11dbj|AK060711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
12gb|BT016602.1| Zea mays clone Contig435 mRNA sequence 145 2e-31
13gb|AY109806.1| Zea mays CL21852_1 mRNA sequence 141 3e-30
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
15dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
16gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genom... 96 1e-16
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 1e-16
18gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genom... 96 1e-16
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
20gb|BT016670.1| Zea mays clone Contig503 mRNA sequence 92 2e-15
21ref|NM_120365.2| Arabidopsis thaliana structural constituent of ... 74 5e-10
22emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BA... 74 5e-10
23gb|AY136320.1| Arabidopsis thaliana 60S ribosomal protein-like (... 74 5e-10
24gb|AY133608.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, co... 74 5e-10
25gb|AY114639.1| Arabidopsis thaliana 60S ribosomal protein-like p... 74 5e-10
26gb|AY093384.1| Arabidopsis thaliana 60S ribosomal protein-like (... 74 5e-10
27gb|AF367314.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, co... 74 5e-10
28gb|AY062452.1| Arabidopsis thaliana 60S ribosomal protein-like (... 74 5e-10
29gb|AY059886.1| Arabidopsis thaliana 60S ribosomal protein-like (... 74 5e-10
30gb|AY054479.1| Arabidopsis thaliana 60S ribosomal protein-like (... 74 5e-10
31dbj|AK117624.1| Arabidopsis thaliana At5g02870 mRNA for putative... 74 5e-10
32gb|BT002088.1| Arabidopsis thaliana 60S ribosomal protein-like (... 74 5e-10
33gb|BT017333.1| Zea mays clone EL01N0321A08.c mRNA sequence 68 3e-08
34gb|S81259.1|S81259S1 CCAAT-binding factor B subunit=HAP2 subunit... 66 1e-07
35gb|AC079605.13|AC079605 Arabidopsis thaliana chromosome 1 BAC T3... 66 1e-07
36gb|U33884.1|BNU33884 Brassica napus clone bncbf-b1 CCAAT-binding... 66 1e-07
37ref|NM_111797.2| Arabidopsis thaliana structural constituent of ... 44 0.44
38ref|NM_001035586.1| Arabidopsis thaliana structural constituent ... 44 0.44
39emb|Z84466.2|HS230G1 Human DNA sequence from clone RP1-230G1 on ... 44 0.44
40gb|BT008495.1| Arabidopsis thaliana At3g09630 gene, complete cds 44 0.44
41gb|AY056781.1| Arabidopsis thaliana AT3g09630/F11F8_22 mRNA, com... 44 0.44
42gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11... 44 0.44
43gb|AY087963.1| Arabidopsis thaliana clone 39947 mRNA, complete s... 44 0.44
44gb|BT002438.1| Arabidopsis thaliana putative 60S ribosomal prote... 44 0.44
45ref|XM_414178.1| PREDICTED: Gallus gallus similar to chromosome ... 42 1.7
46gb|AC129510.15| Homo sapiens chromosome 17, clone RP11-1376P16, ... 42 1.7
47emb|BX842704.15| Zebrafish DNA sequence from clone DKEY-177D20 i... 42 1.7
48gb|AC124634.24| Mus musculus chromosome 18, clone RP23-450K16, c... 42 1.7
49gb|AC123719.10| Mus musculus chromosome 13, clone RP23-412A14, c... 40 6.8
50gb|AC144758.2| Danio rerio, complete sequence 40 6.8
51gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome... 40 6.8
52gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete se... 40 6.8
53gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosom... 40 6.8
54dbj|AK126138.1| Homo sapiens cDNA FLJ44150 fis, clone THYMU20310... 40 6.8
55gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, com... 40 6.8
56gb|DQ363993.1| Saccharum hybrid cultivar putative 60S ribosomal ... 40 6.8
57emb|BX247877.13| Zebrafish DNA sequence from clone DKEY-16J24, c... 40 6.8
58gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, co... 40 6.8
59gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Can... 40 6.8
60gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, com... 40 6.8
61dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.8
62emb|BX511306.10| Zebrafish DNA sequence from clone DKEY-219L12 i... 40 6.8
63emb|Z73316.1|SCYLR144C S.cerevisiae chromosome XII reading frame... 40 6.8
64gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.8
65gb|U53879.1|YSCL9634 Saccharomyces cerevisiae chromosome XII cos... 40 6.8 
>ref|NM_185075.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1464

 Score =  174 bits (88), Expect = 2e-40
 Identities = 182/212 (85%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||| |||||||| ||||||||||||||||| | |||||| ||||| || |||||||||
Sbjct: 1230 aactctgtgtagtcactgtcagaaatcatggttttgtaccatgcctttccagcagccttg 1171

                                                                        
Query: 342  atcttagatgcctcctccgcgctgagcttggtcctcttggagttaatcttgtccttcctg 401
            |||||||| | |||||||| |||||||||||||||||||||||  | ||| ||  |||||
Sbjct: 1170 atcttagaagactcctccgggctgagcttggtcctcttggagtcgagcttctcagtcctg 1111

                                                                        
Query: 402  gccttgacccgggcagcctcagcaagaactgccatcctgcgggcagtcccaaagtagggg 461
            |||||||| || ||||||||||| ||| |||||||| |||| ||||| || ||||| |||
Sbjct: 1110 gccttgacacgcgcagcctcagcgagagctgccatcttgcgcgcagtgccgaagta-ggg 1052

                                            
Query: 462  gttgagcttgagcacggcagcagcattcttca 493
            ||| ||||||||||| || ||  |||||||||
Sbjct: 1051 gttcagcttgagcacagcggccacattcttca 1020
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>ref|XM_507356.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA
          Length = 1487

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1262 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1203

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1202 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1143

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1142 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1083

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1082 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1045
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>ref|XM_476865.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1395

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1266 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1207

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1206 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1147

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1146 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1087

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1086 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1049
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>ref|XM_507355.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA
          Length = 1641

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1266 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1207

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1206 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1147

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1146 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1087

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1086 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1049
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>ref|XM_507354.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA
          Length = 1480

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1267 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1208

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1207 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1148

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1147 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1088

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1087 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1050
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>ref|XM_506197.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA
          Length = 1486

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1267 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1208

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1207 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1148

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1147 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1088

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1087 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1050
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>dbj|AK104504.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F06, full
            insert sequence
          Length = 1486

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1267 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1208

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1207 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1148

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1147 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1088

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1087 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1050
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>dbj|AK104629.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C02, full
            insert sequence
          Length = 1487

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1262 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1203

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1202 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1143

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1142 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1083

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1082 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1045
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>dbj|AK104447.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B12, full
            insert sequence
          Length = 1480

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1267 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1208

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1207 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1148

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1147 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1088

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1087 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1050
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>dbj|AK060963.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-A09, full
            insert sequence
          Length = 1395

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1266 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1207

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1206 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1147

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1146 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1087

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1086 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1049
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>dbj|AK060711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B02, full
            insert sequence
          Length = 1641

 Score =  172 bits (87), Expect = 7e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 1266 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 1207

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||| ||||| ||||||||||| | |||||  |||||||||| ||| ||||||||||||
Sbjct: 1206 taccatgcctttcctgcagccttaaccttagcagcctcctccgggctaagcttggtcctc 1147

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||||| || ||| ||||||||||||||||  |||||||||||||||||    ||||||
Sbjct: 1146 ttggagtcaagcttctccttcctggccttgatgcgggcagcctcagcaagggtggccatc 1087

                                                   
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcac 476
             |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 1086 ttgcgtgcagtgccgaagta-ggggttgagcttgagcac 1049
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>gb|BT016602.1| Zea mays clone Contig435 mRNA sequence
          Length = 1376

 Score =  145 bits (73), Expect = 2e-31
 Identities = 188/225 (83%), Gaps = 1/225 (0%)
 Strand = Plus / Minus

                                                                        
Query: 258  ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
            ||||||||||||| ||||   || |||||||||||||| ||||| || |||||||||| |
Sbjct: 1240 ccgagccacttggtgaagttctcaaactcggtgtagtcactgtccgagatcatggtcttg 1181

                                                                        
Query: 318  taccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtcctc 377
            ||||||||||| || |||||||||| ||| |  | |||||||| | | ||||||||||||
Sbjct: 1180 taccacgccttgccggcagccttgaccttggcagtctcctccgaggtaagcttggtcctc 1121

                                                                        
Query: 378  ttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgccatc 437
            ||||| | || ||| ||||||| ||||||||| |||||||||||||||||    ||||||
Sbjct: 1120 ttggaatcaagcttctccttccgggccttgactcgggcagcctcagcaagggtggccatc 1061

                                                         
Query: 438  ctgcgggcagtcccaaagtagggggttgagcttgagcacggcagc 482
             | |||||||| || | ||| |||||| ||||||||||| |||||
Sbjct: 1060 ttccgggcagtgccgaggta-ggggttcagcttgagcacagcagc 1017
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>gb|AY109806.1| Zea mays CL21852_1 mRNA sequence
          Length = 863

 Score =  141 bits (71), Expect = 3e-30
 Identities = 198/239 (82%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                       
Query: 244 atcactggctgacgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcag 303
           |||||||  |||| || |||||||||| ||||   || ||||| |||||||||||||| |
Sbjct: 669 atcactgtgtgacaccaagccacttggtgaagttctcaaactctgtgtagtcgctgtctg 610

                                                                       
Query: 304 aaatcatggtctggtaccacgccttccctgcagccttgatcttagatgcctcctccgcgc 363
           | |||||||||| |||||||||||| || |||||||||| |||||| | |||||| | ||
Sbjct: 609 agatcatggtcttgtaccacgcctttccagcagccttgaccttagaagtctcctctgggc 550

                                                                       
Query: 364 tgagcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctcag 423
           ||||||||||||||||||||| || ||| | ||||||||||||||| || || ||||| |
Sbjct: 549 tgagcttggtcctcttggagtcaagcttctgcttcctggccttgacacgcgctgcctctg 490

                                                                      
Query: 424 caagaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcacggcagc 482
           | ||  |||||||| | || ||||| || | |||  ||||| ||||||||||| |||||
Sbjct: 489 ctagggctgccatctttcgtgcagtaccgaggta-cgggttcagcttgagcactgcagc 432
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  101 bits (51), Expect = 2e-18
 Identities = 97/111 (87%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                           
Query: 366     agcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctcagca 425
               ||||||||||||||||||| || ||| ||||||||||||||||  |||||||||||||||
Sbjct: 4296482 agcttggtcctcttggagtcaagcttctccttcctggccttgatgcgggcagcctcagca 4296423

                                                                  
Query: 426     agaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcac 476
               ||    |||||| |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 4296422 agggtggccatcttgcgtgcagtgccgaagta-ggggttgagcttgagcac 4296373



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                           
Query: 258     ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
               ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 4297494 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 4297435

                                                         
Query: 318     taccacgccttccctgcagccttgatcttagatgcctcctcc 359
               ||||| ||||| ||||||||||| | |||||  |||||||||
Sbjct: 4297434 taccatgcctttcctgcagccttaaccttagcagcctcctcc 4297393
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>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score =  101 bits (51), Expect = 2e-18
 Identities = 97/111 (87%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                          
Query: 366    agcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctcagca 425
              ||||||||||||||||||| || ||| ||||||||||||||||  |||||||||||||||
Sbjct: 117536 agcttggtcctcttggagtcaagcttctccttcctggccttgatgcgggcagcctcagca 117477

                                                                 
Query: 426    agaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcac 476
              ||    |||||| |||| ||||| || ||||| ||||||||||||||||||
Sbjct: 117476 agggtggccatcttgcgtgcagtgccgaagta-ggggttgagcttgagcac 117427



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                          
Query: 258    ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
              ||||||||||| ||||||  ||||||||| |  ||||| ||||| || |||||||||| |
Sbjct: 118548 ccgagccacttcgagaagttgtcgaactcagcatagtcactgtctgagatcatggtcttg 118489

                                                        
Query: 318    taccacgccttccctgcagccttgatcttagatgcctcctcc 359
              ||||| ||||| ||||||||||| | |||||  |||||||||
Sbjct: 118488 taccatgcctttcctgcagccttaaccttagcagcctcctcc 118447
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>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete
             sequence
          Length = 141582

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 112/132 (84%), Gaps = 1/132 (0%)
 Strand = Plus / Minus

                                                                         
Query: 362   gctgagcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctc 421
             |||||||||||||||||||||||  | ||| ||  ||||||||||||| || ||||||||
Sbjct: 38574 gctgagcttggtcctcttggagtcgagcttctcagtcctggccttgacacgcgcagcctc 38515

                                                                         
Query: 422   agcaagaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcacggcag 481
             ||| ||| |||||||| |||| ||||| || ||||| |||||| ||||||||||| || |
Sbjct: 38514 agcgagagctgccatcttgcgcgcagtgccgaagta-ggggttcagcttgagcacagcgg 38456

                         
Query: 482   cagcattcttca 493
             |  |||||||||
Sbjct: 38455 ccacattcttca 38444



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                         
Query: 282   aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
             ||||| |||||||| ||||||||||||||||| | |||||| ||||| || |||||||||
Sbjct: 39607 aactctgtgtagtcactgtcagaaatcatggttttgtaccatgcctttccagcagccttg 39548

                               
Query: 342   atcttagatgcctcctcc 359
             |||||||| | |||||||
Sbjct: 39547 atcttagaagactcctcc 39530
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 112/132 (84%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                            
Query: 362      gctgagcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctc 421
                |||||||||||||||||||||||  | ||| ||  ||||||||||||| || ||||||||
Sbjct: 32840967 gctgagcttggtcctcttggagtcgagcttctcagtcctggccttgacacgcgcagcctc 32841026

                                                                            
Query: 422      agcaagaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcacggcag 481
                ||| ||| |||||||| |||| ||||| || ||||| |||||| ||||||||||| || |
Sbjct: 32841027 agcgagagctgccatcttgcgcgcagtgccgaagta-ggggttcagcttgagcacagcgg 32841085

                            
Query: 482      cagcattcttca 493
                |  |||||||||
Sbjct: 32841086 ccacattcttca 32841097



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 282      aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
                ||||| |||||||| ||||||||||||||||| | |||||| ||||| || |||||||||
Sbjct: 32839934 aactctgtgtagtcactgtcagaaatcatggttttgtaccatgcctttccagcagccttg 32839993

                                  
Query: 342      atcttagatgcctcctcc 359
                |||||||| | |||||||
Sbjct: 32839994 atcttagaagactcctcc 32840011
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>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete
              sequence
          Length = 151479

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 112/132 (84%), Gaps = 1/132 (0%)
 Strand = Plus / Minus

                                                                          
Query: 362    gctgagcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctc 421
              |||||||||||||||||||||||  | ||| ||  ||||||||||||| || ||||||||
Sbjct: 149208 gctgagcttggtcctcttggagtcgagcttctcagtcctggccttgacacgcgcagcctc 149149

                                                                          
Query: 422    agcaagaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcacggcag 481
              ||| ||| |||||||| |||| ||||| || ||||| |||||| ||||||||||| || |
Sbjct: 149148 agcgagagctgccatcttgcgcgcagtgccgaagta-ggggttcagcttgagcacagcgg 149090

                          
Query: 482    cagcattcttca 493
              |  |||||||||
Sbjct: 149089 ccacattcttca 149078



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                          
Query: 282    aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
              ||||| |||||||| ||||||||||||||||| | |||||| ||||| || |||||||||
Sbjct: 150241 aactctgtgtagtcactgtcagaaatcatggttttgtaccatgcctttccagcagccttg 150182

                                
Query: 342    atcttagatgcctcctcc 359
              |||||||| | |||||||
Sbjct: 150181 atcttagaagactcctcc 150164
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 112/132 (84%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                            
Query: 362      gctgagcttggtcctcttggagttaatcttgtccttcctggccttgacccgggcagcctc 421
                |||||||||||||||||||||||  | ||| ||  ||||||||||||| || ||||||||
Sbjct: 32931477 gctgagcttggtcctcttggagtcgagcttctcagtcctggccttgacacgcgcagcctc 32931536

                                                                            
Query: 422      agcaagaactgccatcctgcgggcagtcccaaagtagggggttgagcttgagcacggcag 481
                ||| ||| |||||||| |||| ||||| || ||||| |||||| ||||||||||| || |
Sbjct: 32931537 agcgagagctgccatcttgcgcgcagtgccgaagta-ggggttcagcttgagcacagcgg 32931595

                            
Query: 482      cagcattcttca 493
                |  |||||||||
Sbjct: 32931596 ccacattcttca 32931607



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 282      aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
                ||||| |||||||| ||||||||||||||||| | |||||| ||||| || |||||||||
Sbjct: 32930444 aactctgtgtagtcactgtcagaaatcatggttttgtaccatgcctttccagcagccttg 32930503

                                  
Query: 342      atcttagatgcctcctcc 359
                |||||||| | |||||||
Sbjct: 32930504 atcttagaagactcctcc 32930521
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>gb|BT016670.1| Zea mays clone Contig503 mRNA sequence
          Length = 1384

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 184/228 (80%), Gaps = 4/228 (1%)
 Strand = Plus / Minus

                                                                        
Query: 255  acgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtc 314
            |||||||||||||| ||||||   || |||||||||||||||||||| || | |||||||
Sbjct: 1236 acgccgagccactttgagaagttctcaaactcggtgtagtcgctgtccgagaccatggtc 1177

                                                                        
Query: 315  tggtaccacgccttccctgcagccttgatcttagatgcctcctccgcgctgagcttggtc 374
            | |||||| ||||| || |||||||| | |||    ||   ||||| | | |||||||||
Sbjct: 1176 ttgtaccatgccttgccagcagccttaacctt---ggcagtctccggggtaagcttggtc 1120

                                                                        
Query: 375  ctcttggagttaatcttgtccttcctggccttgacccgggcagcctcagcaagaactgcc 434
            ||||||||||  | |||  ||||||||||||| || || ||||||||||||||    |||
Sbjct: 1119 ctcttggagtcgagcttcaccttcctggccttcacacgagcagcctcagcaagggtggcc 1060

                                                            
Query: 435  atcctgcgggcagtcccaaagtagggggttgagcttgagcacggcagc 482
            ||| | |||||||| || | ||| ||||||||| |||||||| |||||
Sbjct: 1059 atcttccgggcagtgcccaggta-ggggttgagtttgagcacagcagc 1013
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>ref|NM_120365.2| Arabidopsis thaliana structural constituent of ribosome AT5G02870
            mRNA, complete cds
          Length = 1460

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1257 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1198

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1197 gataccaagccttgcctgctgctttgatc 1169
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>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project)
          Length = 104769

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                         
Query: 256   cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
             |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 54991 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 54932

                                          
Query: 316   ggtaccacgccttccctgcagccttgatc 344
             | ||||| ||||| ||||| || ||||||
Sbjct: 54931 gataccaagccttgcctgctgctttgatc 54903
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>gb|AY136320.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA,
            complete cds
          Length = 1391

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1235 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1176

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1175 gataccaagccttgcctgctgctttgatc 1147
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>gb|AY133608.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, complete cds
          Length = 924

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 256 cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
           |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 913 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 854

                                        
Query: 316 ggtaccacgccttccctgcagccttgatc 344
           | ||||| ||||| ||||| || ||||||
Sbjct: 853 gataccaagccttgcctgctgctttgatc 825
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>gb|AY114639.1| Arabidopsis thaliana 60S ribosomal protein-like protein (At5g02870)
            mRNA, complete cds
          Length = 1278

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1213 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1154

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1153 gataccaagccttgcctgctgctttgatc 1125
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>gb|AY093384.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA,
            complete cds
          Length = 1278

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1213 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1154

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1153 gataccaagccttgcctgctgctttgatc 1125
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>gb|AF367314.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, complete cds
          Length = 1417

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1229 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1170

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1169 gataccaagccttgcctgctgctttgatc 1141
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>gb|AY062452.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870;
            F9G14_180) mRNA, complete cds
          Length = 1376

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1234 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1175

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1174 gataccaagccttgcctgctgctttgatc 1146
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>gb|AY059886.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870;
            F9G14_180) mRNA, complete cds
          Length = 1424

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1257 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1198

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1197 gataccaagccttgcctgctgctttgatc 1169
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>gb|AY054479.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870;
            F9G14_180) mRNA, complete cds
          Length = 1436

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1234 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1175

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1174 gataccaagccttgcctgctgctttgatc 1146
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>dbj|AK117624.1| Arabidopsis thaliana At5g02870 mRNA for putative 60S ribosomal
            protein, complete cds, clone: RAFL17-28-D01
          Length = 2686

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1254 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1195

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1194 gataccaagccttgcctgctgctttgatc 1166
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>gb|BT002088.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA,
            complete cds
          Length = 1278

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  cgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtct 315
            |||| |||||||||| ||||   ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 1213 cgccaagccacttggtgaagttatcgaactcggtgtagtcactgtctgaaatcatagtct 1154

                                         
Query: 316  ggtaccacgccttccctgcagccttgatc 344
            | ||||| ||||| ||||| || ||||||
Sbjct: 1153 gataccaagccttgcctgctgctttgatc 1125
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>gb|BT017333.1| Zea mays clone EL01N0321A08.c mRNA sequence
          Length = 710

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 255 acgccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtc 314
           |||||||||||||| ||||||   || |||||||||||||||||||| || | |||||||
Sbjct: 569 acgccgagccactttgagaagttctcaaactcggtgtagtcgctgtccgagaccatggtc 510

                         
Query: 315 tggtaccacgcctt 328
           | |||||| |||||
Sbjct: 509 ttgtaccatgcctt 496
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>gb|S81259.1|S81259S1 CCAAT-binding factor B subunit=HAP2 subunit homolog,
           CBF-B=CCAAT-binding factor B subunit [Brassica napus,
           cv. Westar, Genomic, 423 nt, segment 1 of 2]
          Length = 423

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/64 (89%), Gaps = 2/64 (3%)
 Strand = Plus / Minus

                                                                       
Query: 282 aactcggtgtagtcgctgtcagaaat--catggtctggtaccacgccttccctgcagcct 339
           |||||||||||||| |||||||| ||  ||| ||||| ||||||||||||||||| ||||
Sbjct: 377 aactcggtgtagtcactgtcagagatatcatagtctgctaccacgccttccctgctgcct 318

               
Query: 340 tgat 343
           ||||
Sbjct: 317 tgat 314
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>gb|AC079605.13|AC079605 Arabidopsis thaliana chromosome 1 BAC T32G9 genomic sequence, complete
             sequence
          Length = 104807

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 258   ccgagccacttggagaagacgtcgaactcggtgtagtcgctgtcagaaatcatggtctgg 317
             ||||||||||| ||||||  ||| ||||||| |||||| ||||| || |||||||||| |
Sbjct: 17972 ccgagccacttagagaagttgtcaaactcggggtagtcactgtccgagatcatggtcttg 17913

                              
Query: 318   taccacgccttccctgc 334
             ||||| | |||||||||
Sbjct: 17912 taccatgacttccctgc 17896
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>gb|U33884.1|BNU33884 Brassica napus clone bncbf-b1 CCAAT-binding factor B subunit
           homolog mRNA, complete cds
          Length = 1220

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/64 (89%), Gaps = 2/64 (3%)
 Strand = Plus / Minus

                                                                       
Query: 282 aactcggtgtagtcgctgtcagaaat--catggtctggtaccacgccttccctgcagcct 339
           |||||||||||||| |||||||| ||  ||| ||||| ||||||||||||||||| ||||
Sbjct: 92  aactcggtgtagtcactgtcagagatatcatagtctgctaccacgccttccctgctgcct 33

               
Query: 340 tgat 343
           ||||
Sbjct: 32  tgat 29
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>ref|NM_111797.2| Arabidopsis thaliana structural constituent of ribosome AT3G09630
            transcript variant AT3G09630.1 mRNA, complete cds
          Length = 1560

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 1254 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 1195

              
Query: 342  at 343
            ||
Sbjct: 1194 at 1193
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>ref|NM_001035586.1| Arabidopsis thaliana structural constituent of ribosome AT3G09630
            transcript variant AT3G09630.2 mRNA, complete cds
          Length = 1598

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 1257 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 1198

              
Query: 342  at 343
            ||
Sbjct: 1197 at 1196
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>emb|Z84466.2|HS230G1 Human DNA sequence from clone RP1-230G1 on chromosome Xp11.3 Contains
             5'UTR of the ZNF41 gene for zinc finger protein 41, a
             novel gene (LOC203414), a chromosome 6 open reading frame
             68 pseudogene (LOC286402), the ARAF1 gene for v-raf murine
             sarcoma 3611 viral oncogene homolog 1, the 3' end of the
             SYN1 gene for synapsin I, the TIMP1 gene for tissue
             inhibitor of metalloproteinase 1 (erythroid potentiating
             activity, collagenase inhibitor) and five CpG islands,
             complete sequence
          Length = 125517

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 78    aaaaaggcatccacagataaaa 99
             ||||||||||||||||||||||
Sbjct: 10091 aaaaaggcatccacagataaaa 10112
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>gb|BT008495.1| Arabidopsis thaliana At3g09630 gene, complete cds
          Length = 1221

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 1184 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 1125

              
Query: 342  at 343
            ||
Sbjct: 1124 at 1123
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>gb|AY056781.1| Arabidopsis thaliana AT3g09630/F11F8_22 mRNA, complete cds
          Length = 1416

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 1251 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 1192

              
Query: 342  at 343
            ||
Sbjct: 1191 at 1190
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>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete
             sequence
          Length = 107603

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 282   aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
             ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 53780 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 53721

               
Query: 342   at 343
             ||
Sbjct: 53720 at 53719
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>gb|AY087963.1| Arabidopsis thaliana clone 39947 mRNA, complete sequence
          Length = 1406

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 1254 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 1195

              
Query: 342  at 343
            ||
Sbjct: 1194 at 1193
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>gb|BT002438.1| Arabidopsis thaliana putative 60S ribosomal protein L1 (At3g09630)
            mRNA, complete cds
          Length = 1437

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 282  aactcggtgtagtcgctgtcagaaatcatggtctggtaccacgccttccctgcagccttg 341
            ||||||||||| || ||||| || ||||| |||| |||||||| ||| ||||| || |||
Sbjct: 1252 aactcggtgtaatcactgtcggagatcatagtcttgtaccacgacttgcctgctgctttg 1193

              
Query: 342  at 343
            ||
Sbjct: 1192 at 1191
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>ref|XM_414178.1| PREDICTED: Gallus gallus similar to chromosome 16 open reading
           frame 44 (LOC415816), mRNA
          Length = 2430

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 413 ggcagcctcagcaagaactgc 433
           |||||||||||||||||||||
Sbjct: 429 ggcagcctcagcaagaactgc 409
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>gb|AC129510.15| Homo sapiens chromosome 17, clone RP11-1376P16, complete sequence
          Length = 83521

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   accacgccttccctgcagcct 339
             |||||||||||||||||||||
Sbjct: 26001 accacgccttccctgcagcct 26021
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>emb|BX842704.15| Zebrafish DNA sequence from clone DKEY-177D20 in linkage group 20
             Contains four CpG islands, complete sequence
          Length = 154958

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   gacacaatgacaaaatcatac 175
             |||||||||||||||||||||
Sbjct: 37291 gacacaatgacaaaatcatac 37271
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>gb|AC124634.24| Mus musculus chromosome 18, clone RP23-450K16, complete sequence
          Length = 178989

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   ctggtaccacgccttccctgc 334
             |||||||||||||||||||||
Sbjct: 19419 ctggtaccacgccttccctgc 19399
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>gb|AC123719.10| Mus musculus chromosome 13, clone RP23-412A14, complete sequence
          Length = 202533

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   gagataaccagctaccaaaa 124
             ||||||||||||||||||||
Sbjct: 77575 gagataaccagctaccaaaa 77594
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>gb|AC144758.2| Danio rerio, complete sequence
          Length = 177787

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   caatgacaaaatcatacttt 178
             ||||||||||||||||||||
Sbjct: 43519 caatgacaaaatcatacttt 43538
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>gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome 9, complete sequence
          Length = 157088

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   taaccagctaccaaaacagc 128
             ||||||||||||||||||||
Sbjct: 42556 taaccagctaccaaaacagc 42537
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>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence
          Length = 104878

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ataagagtatatgaaaaaca 20
             ||||||||||||||||||||
Sbjct: 88002 ataagagtatatgaaaaaca 87983
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>gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosome 9, complete sequence
          Length = 191882

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    taaccagctaccaaaacagc 128
              ||||||||||||||||||||
Sbjct: 130627 taaccagctaccaaaacagc 130608
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>dbj|AK126138.1| Homo sapiens cDNA FLJ44150 fis, clone THYMU2031046, moderately
            similar to Copine III
          Length = 2292

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  cagcctcagcaagaactgcc 434
            ||||||||||||||||||||
Sbjct: 1311 cagcctcagcaagaactgcc 1330
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>gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, complete sequence
          Length = 196808

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    tcttgtccttcctggccttg 407
              ||||||||||||||||||||
Sbjct: 190224 tcttgtccttcctggccttg 190243
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>gb|DQ363993.1| Saccharum hybrid cultivar putative 60S ribosomal protein L1 mRNA,
           partial cds
          Length = 212

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 459 ggggttgagcttgagcacggcagc 482
           |||||||||||||||||| |||||
Sbjct: 211 ggggttgagcttgagcacagcagc 188
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>emb|BX247877.13| Zebrafish DNA sequence from clone DKEY-16J24, complete sequence
          Length = 189537

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    tgccacagaacatgtctcgaaaaa 82
             |||||||||||||||||| |||||
Sbjct: 90088 tgccacagaacatgtctccaaaaa 90065
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>gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, complete sequence
          Length = 198253

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    cagcctcagcaagaactgcc 434
              ||||||||||||||||||||
Sbjct: 116595 cagcctcagcaagaactgcc 116576
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>gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 201801

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     taagagtatatgaaaaacag 21
             ||||||||||||||||||||
Sbjct: 61275 taagagtatatgaaaaacag 61256
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>gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, complete sequence
          Length = 217521

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   cagcctcagcaagaactgcc 434
             ||||||||||||||||||||
Sbjct: 32283 cagcctcagcaagaactgcc 32264
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 387     atcttgtccttcctggccttgacc 410
               |||||||||||| |||||||||||
Sbjct: 4275777 atcttgtccttcttggccttgacc 4275754
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>emb|BX511306.10| Zebrafish DNA sequence from clone DKEY-219L12 in linkage group 19,
             complete sequence
          Length = 223646

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   acacaatgacaaaatcatac 175
             ||||||||||||||||||||
Sbjct: 55500 acacaatgacaaaatcatac 55481
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>emb|Z73316.1|SCYLR144C S.cerevisiae chromosome XII reading frame ORF YLR144c
          Length = 2781

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 168  aatcatactttagggtctcaaagg 191
            ||||||||||||| ||||||||||
Sbjct: 2183 aatcatactttagcgtctcaaagg 2160
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     agacgtcgaactcggtgtag 293
               ||||||||||||||||||||
Sbjct: 4727569 agacgtcgaactcggtgtag 4727550
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>gb|U53879.1|YSCL9634 Saccharomyces cerevisiae chromosome XII cosmid 9634
          Length = 39322

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 168  aatcatactttagggtctcaaagg 191
            ||||||||||||| ||||||||||
Sbjct: 1962 aatcatactttagcgtctcaaagg 1939


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,060,314
Number of Sequences: 3902068
Number of extensions: 4060314
Number of successful extensions: 76780
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76560
Number of HSP's gapped (non-prelim): 194
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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