>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 89/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                            
Query: 60       tcacatgatgcacacaataaacagacagnctatgacaagtncctacaatgggctggacgg 119
                ||||||||||||||| ||||| ||| || ||||||||  | ||| || || |||||||||
Sbjct: 34633742 tcacatgatgcacacgataaatagatag-ctatgacagatacctccattgtgctggacgg 34633800

                                                              
Query: 120      actttcnagacaagaagaaccctcgatgatgagtaatcaaatgtag 165
                 || |  |||||||||||||||| ||||| |||||||| |||||||
Sbjct: 34633801 tctcttgagacaagaagaacccttgatgacgagtaatcgaatgtag 34633846

>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1520_C09
          Length = 145553

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 89/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                          
Query: 60     tcacatgatgcacacaataaacagacagnctatgacaagtncctacaatgggctggacgg 119
              ||||||||||||||| ||||| ||| || ||||||||  | ||| || || |||||||||
Sbjct: 144682 tcacatgatgcacacgataaatagatag-ctatgacagatacctccattgtgctggacgg 144740

                                                            
Query: 120    actttcnagacaagaagaaccctcgatgatgagtaatcaaatgtag 165
               || |  |||||||||||||||| ||||| |||||||| |||||||
Sbjct: 144741 tctcttgagacaagaagaacccttgatgacgagtaatcgaatgtag 144786

>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1112_G06
          Length = 122580

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 89/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                          
Query: 60     tcacatgatgcacacaataaacagacagnctatgacaagtncctacaatgggctggacgg 119
              ||||||||||||||| ||||| ||| || ||||||||  | ||| || || |||||||||
Sbjct: 100357 tcacatgatgcacacgataaatagatag-ctatgacagatacctccattgtgctggacgg 100415

                                                            
Query: 120    actttcnagacaagaagaaccctcgatgatgagtaatcaaatgtag 165
               || |  |||||||||||||||| ||||| |||||||| |||||||
Sbjct: 100416 tctcttgagacaagaagaacccttgatgacgagtaatcgaatgtag 100461

>ref|XM_468328.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3093

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 111  gctggacggactttcnagacaagaagaaccctcgatgatgagtaatcaaatgtag 165
            ||||||||| || |  |||||||||||||||| ||||| |||||||| |||||||
Sbjct: 3071 gctggacggtctcttgagacaagaagaacccttgatgacgagtaatcgaatgtag 3017

>ref|XM_792804.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA
           5033425B17 (LOC593323), mRNA
          Length = 471

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 102 ctacaatgggctggacggactt 123
           ||||||||||||||||||||||
Sbjct: 424 ctacaatgggctggacggactt 403

>ref|XM_780694.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA
           5033425B17 (LOC580647), mRNA
          Length = 683

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 102 ctacaatgggctggacggactt 123
           ||||||||||||||||||||||
Sbjct: 295 ctacaatgggctggacggactt 274

>gb|AC119735.3| Homo sapiens 3 BAC RP11-78E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 69953

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    catgatgcacacaataaacagaca 86
             ||||||| ||||||||||||||||
Sbjct: 56778 catgatgaacacaataaacagaca 56801

>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence
          Length = 111010

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    atattttacatgtcacatga 67
             ||||||||||||||||||||
Sbjct: 55232 atattttacatgtcacatga 55251

>emb|BX649536.8| Zebrafish DNA sequence from clone DKEY-21N8 in linkage group 3, complete
              sequence
          Length = 203180

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     atgactacacaatcaaagca 35
              ||||||||||||||||||||
Sbjct: 146040 atgactacacaatcaaagca 146059

>gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1537_B05,
             complete sequence
          Length = 129890

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 53    ttacatgtcacatgatgcacaca 75
             ||||||| |||||||||||||||
Sbjct: 31917 ttacatggcacatgatgcacaca 31895

>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
              complete sequence
          Length = 134183

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 53     ttacatgtcacatgatgcacaca 75
              ||||||| |||||||||||||||
Sbjct: 121040 ttacatggcacatgatgcacaca 121018

>emb|AL391595.14| Human DNA sequence from clone RP11-51I15 on chromosome 6 Contains the
             5' part of the BCKDHB gene for branched chain keto acid
             dehydrogenase E1, beta polypeptide (maple syrup urine
             disease) and one CpG island, complete sequence
          Length = 119955

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    atgtcacatgatgcacaca 75
             |||||||||||||||||||
Sbjct: 12916 atgtcacatgatgcacaca 12898

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 53       ttacatgtcacatgatgcacaca 75
                ||||||| |||||||||||||||
Sbjct: 16622301 ttacatggcacatgatgcacaca 16622279

>gb|AC093596.3| Homo sapiens BAC clone RP11-98M12 from 4, complete sequence
          Length = 152347

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    tattttacatgtcacatga 67
             |||||||||||||||||||
Sbjct: 55713 tattttacatgtcacatga 55731

>gb|AC009024.6|AC009024 Homo sapiens chromosome 16 clone RP11-112G1, complete sequence
          Length = 158256

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    atgcacacaataaacagac 85
             |||||||||||||||||||
Sbjct: 15374 atgcacacaataaacagac 15356

>emb|BX284615.6| Mouse DNA sequence from clone RP23-20B20 on chromosome 2, complete
             sequence
          Length = 98233

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 12    acaaatgactacacaatcaaagcataa 38
             ||||||||||||||||| |||| ||||
Sbjct: 84867 acaaatgactacacaattaaaggataa 84841

>emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chromosome 2, complete
             sequence
          Length = 126095

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    attttacatgtcacatgat 68
             |||||||||||||||||||
Sbjct: 15489 attttacatgtcacatgat 15471

>gb|AC140797.10| Mus musculus chromosome 3, clone RP23-137D8, complete sequence
          Length = 153333

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    catgatgcacacaataaac 81
             |||||||||||||||||||
Sbjct: 72116 catgatgcacacaataaac 72134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,057,026
Number of Sequences: 3902068
Number of extensions: 1057026
Number of successful extensions: 76790
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76699
Number of HSP's gapped (non-prelim): 88
length of query: 165
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 143
effective length of database: 17,147,199,772
effective search space: 2452049567396
effective search space used: 2452049567396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)