ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3o10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RL3_ORYSA (P35684) 60S ribosomal protein L3 65 4e-23
2RL3A_ARATH (P17094) 60S ribosomal protein L3 58 1e-17
3RL3B_ARATH (P22738) 60S ribosomal protein L3 59 5e-17
4RL3_DROME (O16797) 60S ribosomal protein L3 49 2e-14
5RL3_BOVIN (P39872) 60S ribosomal protein L3 51 8e-14
6RL3_TOXCA (P49149) 60S ribosomal protein L3 50 8e-14
7RL3_RAT (P21531) 60S ribosomal protein L3 (L4) 50 1e-13
8RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein) 50 1e-13
9RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3 50 1e-13
10RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi... 50 1e-13
11RL3_CAEEL (P50880) 60S ribosomal protein L3 51 1e-12
12RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3 51 1e-12
13RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like 50 2e-12
14RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like 50 4e-12
15RL3_DICDI (P34113) 60S ribosomal protein L3 44 9e-11
16RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3 48 1e-10
17RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23) 48 3e-10
18RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten... 43 3e-10
19RL3B_SCHPO (P36584) 60S ribosomal protein L3-B 45 4e-10
20RL3A_SCHPO (P40372) 60S ribosomal protein L3-A 45 4e-10
21RL3_NEUCR (P59671) 60S ribosomal protein L3 45 1e-09
22RL3_ASHGO (Q759R7) 60S ribosomal protein L3 43 3e-09
23RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3 43 6e-09
24RL3_KLULA (Q6CJR7) 60S ribosomal protein L3 43 1e-08
25RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3 43 4e-08
26TILS_AZOSE (Q5P2I9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 29 2.6
27S12A2_HUMAN (P55011) Solute carrier family 12 member 2 (Bumetani... 28 5.8
28ABCC8_HUMAN (Q09428) ATP-binding cassette transporter sub-family... 28 5.8
29Y2028_MYCBO (P64922) Hypothetical protein Mb2028c 28 7.6
30Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061 28 7.6
31VNS1_EHDV2 (P27585) Nonstructural protein NS1 (Hydrophobic tubul... 27 9.9
32YS44_CAEEL (Q09372) Hypothetical protein ZK177.4 27 9.9
33FRMD6_HUMAN (Q96NE9) FERM domain-containing protein 6 27 9.9
34MURB1_BACHK (Q6HEQ5) UDP-N-acetylenolpyruvoylglucosamine reducta... 27 9.9
35MURB1_BACC1 (Q732F9) UDP-N-acetylenolpyruvoylglucosamine reducta... 27 9.9
36MURB1_BACAN (Q81WD1) UDP-N-acetylenolpyruvoylglucosamine reducta... 27 9.9
37SHCBA_XENLA (Q6GPE9) SHC SH2 domain-binding protein 1 homolog A 27 9.9 
>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score = 65.5 bits (158), Expect(2) = 4e-23
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           IKLKF+DTSSKFGHGRFQTTDEKQRF+GKLK
Sbjct: 357 IKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 387



 Score = 60.5 bits (145), Expect(2) = 4e-23
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           MIKGCCVGPKKRVVTLRQSLLKQTSRLAL
Sbjct: 326 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 354
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>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score = 58.2 bits (139), Expect(2) = 1e-17
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           MIKGCCVGPKKRVVTLRQSLL QTSRLAL
Sbjct: 326 MIKGCCVGPKKRVVTLRQSLLTQTSRLAL 354



 Score = 48.9 bits (115), Expect(2) = 1e-17
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 132
           IKLKF+DT+S FGHGRFQT+ EK RFY ++
Sbjct: 357 IKLKFIDTASIFGHGRFQTSLEKMRFYNRV 386
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>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score = 58.5 bits (140), Expect(2) = 5e-17
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           MIKGCCVGPKKRVVTLRQ+LLKQTSRLA+
Sbjct: 326 MIKGCCVGPKKRVVTLRQTLLKQTSRLAM 354



 Score = 46.6 bits (109), Expect(2) = 5e-17
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGK 135
           IKLKF+D +S  GHGRFQT+ EK +FYG+
Sbjct: 357 IKLKFIDAASNGGHGRFQTSQEKAKFYGR 385
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>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score = 48.9 bits (115), Expect(2) = 2e-14
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           MIKGCC+G KKR++TLR+SLLK T R AL
Sbjct: 331 MIKGCCIGSKKRIITLRKSLLKHTKRSAL 359



 Score = 47.8 bits (112), Expect(2) = 2e-14
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           IKLKF+DTSSK GHGRFQT  +K  F G LK
Sbjct: 362 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 392
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>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score = 50.8 bits (120), Expect(2) = 8e-14
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 362 IDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392



 Score = 43.5 bits (101), Expect(2) = 8e-14
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
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>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score = 50.4 bits (119), Expect(2) = 8e-14
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LK++DTSSKFGHGRFQT  EK+ F GKLK
Sbjct: 359 INLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 389



 Score = 43.9 bits (102), Expect(2) = 8e-14
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLA 232
           MI+GCCVG KKR +TLR+SL+ QT R A
Sbjct: 328 MIRGCCVGSKKRPITLRKSLIVQTKRFA 355
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>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score = 50.4 bits (119), Expect(2) = 1e-13
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 362 IDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392



 Score = 43.5 bits (101), Expect(2) = 1e-13
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
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>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score = 50.4 bits (119), Expect(2) = 1e-13
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 362 IDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392



 Score = 43.5 bits (101), Expect(2) = 1e-13
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
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>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score = 50.4 bits (119), Expect(2) = 1e-13
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 362 IDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392



 Score = 43.5 bits (101), Expect(2) = 1e-13
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
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>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score = 50.4 bits (119), Expect(2) = 1e-13
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 362 IDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392



 Score = 43.5 bits (101), Expect(2) = 1e-13
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
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>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score = 50.8 bits (120), Expect(2) = 1e-12
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 239 VSHXRXIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           V+H + I LK++DTSSK GHGRFQTT EK+ F GKLK
Sbjct: 355 VAHEK-INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390



 Score = 39.7 bits (91), Expect(2) = 1e-12
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLA 232
           M++G  +GPKKR++TLR+SL+ QT R+A
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVA 356
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>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score = 50.8 bits (120), Expect(2) = 1e-12
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 239 VSHXRXIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           V+H + I LK++DTSSK GHGRFQTT EK+ F GKLK
Sbjct: 355 VAHEK-INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390



 Score = 39.7 bits (91), Expect(2) = 1e-12
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLA 232
           M++G  +GPKKR++TLR+SL+ QT R+A
Sbjct: 329 MLRGAILGPKKRLITLRKSLITQTKRVA 356
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>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score = 50.1 bits (118), Expect(2) = 2e-12
 Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
 Frame = -2

Query: 242 LVSHXRX----IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           LV H R     I+LKF+DT+SKFGHGRFQT  EK+ F G  K
Sbjct: 351 LVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392



 Score = 39.7 bits (91), Expect(2) = 2e-12
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC  G KKRV+TLR+SLL   SR AL
Sbjct: 331 MLKGCIAGTKKRVITLRKSLLVHHSRQAL 359
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>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score = 50.1 bits (118), Expect(2) = 4e-12
 Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
 Frame = -2

Query: 242 LVSHXRX----IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           LV H R     I+LKF+DT+SKFGHGRFQT  EK+ F G  K
Sbjct: 351 LVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392



 Score = 38.5 bits (88), Expect(2) = 4e-12
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC  G KKRV+TLR+SLL   SR A+
Sbjct: 331 MLKGCIAGTKKRVITLRKSLLVHHSRQAV 359
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>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score = 43.5 bits (101), Expect(2) = 9e-11
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           I LKF+DTSSKFGHG  QT ++K +++G  K
Sbjct: 361 ITLKFIDTSSKFGHGLHQTAEDKTKYFGVKK 391



 Score = 40.4 bits (93), Expect(2) = 9e-11
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC  GP+KR +TLR+S+  QT R AL
Sbjct: 330 MLKGCVAGPRKRALTLRKSITTQTGRAAL 358
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>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score = 47.8 bits (112), Expect(2) = 1e-10
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 215 LKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           +KFVDTSSK GHGRFQT+ EK+ FYG  K
Sbjct: 347 IKFVDTSSKIGHGRFQTSAEKKAFYGARK 375



 Score = 35.8 bits (81), Expect(2) = 1e-10
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQ 247
           M+KG  VG +KRVVTLR+SLL+Q
Sbjct: 317 MVKGAVVGARKRVVTLRKSLLRQ 339
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>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score = 47.8 bits (112), Expect(2) = 3e-10
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           ++LK++DTSSKFGHG FQT +EK+ F G LK
Sbjct: 355 VELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385



 Score = 34.7 bits (78), Expect(2) = 3e-10
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLA 232
           M+KG   G KKRV+TLR++L  QTSR A
Sbjct: 324 MVKGSVPGVKKRVMTLRKTLYPQTSRRA 351
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>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score = 43.1 bits (100), Expect(2) = 3e-10
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFG GRFQT  EK  F G LK
Sbjct: 353 VSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 383



 Score = 38.9 bits (89), Expect(2) = 3e-10
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KGC  G +KR+VTLR+SL   TSR AL
Sbjct: 322 MVKGCIPGNRKRIVTLRKSLYTNTSRKAL 350
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>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score = 45.4 bits (106), Expect(2) = 4e-10
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFGHGRFQT  E ++F G LK
Sbjct: 353 VSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 383



 Score = 36.2 bits (82), Expect(2) = 4e-10
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+ G   GP KRV+TLR+SLL  TSR AL
Sbjct: 322 MLNGATPGPVKRVLTLRKSLLTHTSRKAL 350
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>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score = 45.4 bits (106), Expect(2) = 4e-10
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFGHGRFQT  E ++F G LK
Sbjct: 353 VSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 383



 Score = 36.2 bits (82), Expect(2) = 4e-10
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+ G   GP KRV+TLR+SLL  TSR AL
Sbjct: 322 MLNGATPGPVKRVLTLRKSLLTHTSRKAL 350
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>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score = 45.4 bits (106), Expect(2) = 1e-09
 Identities = 19/31 (61%), Positives = 26/31 (83%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           ++LK++DTSS+FGHG FQT  EK++F G LK
Sbjct: 355 VELKWIDTSSEFGHGAFQTPAEKKQFQGTLK 385



 Score = 34.7 bits (78), Expect(2) = 1e-09
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KG   G KKRV+TLR+S+   TSR AL
Sbjct: 324 MVKGSVPGVKKRVMTLRKSMFVHTSRKAL 352
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>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score = 43.1 bits (100), Expect(2) = 3e-09
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFG GRFQT  EK  F G LK
Sbjct: 355 VNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385



 Score = 35.8 bits (81), Expect(2) = 3e-09
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KG   G +KRVVTLR+SL   TSR AL
Sbjct: 324 MVKGSIPGTRKRVVTLRKSLYTSTSRRAL 352
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>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score = 42.7 bits (99), Expect(2) = 6e-09
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFG GRFQT  EK  F G LK
Sbjct: 354 VTLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384



 Score = 35.0 bits (79), Expect(2) = 6e-09
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           M+KG   G KKRVVTLR+SL   TSR A+
Sbjct: 323 MVKGSIPGCKKRVVTLRKSLYTNTSRKAV 351
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>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score = 42.7 bits (99), Expect(2) = 1e-08
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFG GRFQT  EK  F G LK
Sbjct: 354 VTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLAL 229
           ++KG   G +KRVVTLR+SL   TSR AL
Sbjct: 323 ILKGSIPGTRKRVVTLRKSLYTNTSRKAL 351
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>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score = 43.1 bits (100), Expect(2) = 4e-08
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 221 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 129
           + LK++DT+SKFG GRFQT  EK  F G LK
Sbjct: 354 VNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384



 Score = 32.0 bits (71), Expect(2) = 4e-08
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -1

Query: 315 MIKGCCVGPKKRVVTLRQSLLKQTSRLA 232
           ++KG   G KKR+VT+R+SL   TSR A
Sbjct: 323 LLKGSIPGVKKRIVTIRKSLYVDTSRRA 350
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>TILS_AZOSE (Q5P2I9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 423

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/71 (25%), Positives = 28/71 (39%)
 Frame = -1

Query: 306 GCCVGPKKRVVTLRQSLLKQTSRLALXXNQAQVCRHLFQVWARPFPDHRREAEVLWQAQG 127
           GC    + R+V   + L    + L L    A  C +  ++W  P  D   E  + W+ + 
Sbjct: 259 GCEAPARARLVEAVRQLRATHAPLYLPLGTAACCTYRDRLWLEPQRDGAPEQPLPWRQEP 318

Query: 126 LSCCAISVVSF 94
             C    VV F
Sbjct: 319 ALCWGAGVVRF 329
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>S12A2_HUMAN (P55011) Solute carrier family 12 member 2 (Bumetanide-sensitive|
           sodium-(potassium)-chloride cotransporter 1)
           (Basolateral Na-K-Cl symporter)
          Length = 1212

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 174 TAVPKLGRGVDKLELDXSXVRDERSASAGTGGGSP 278
           TAVP +         D   VRDE  A+AG G G P
Sbjct: 37  TAVPSVPEDAAPASRDGGGVRDEGPAAAGDGLGRP 71
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>ABCC8_HUMAN (Q09428) ATP-binding cassette transporter sub-family C member 8|
           (Sulfonylurea receptor 1)
          Length = 1580

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178 PCPNLEEVSTNLSLIXLQCE-TRGLLQQGLAEGHHTLLW 291
           P  NL  + T + L  L CE   G+L  G+ E HH  L+
Sbjct: 68  PGHNLRWILTFMLLFVLVCEIAEGILSDGVTESHHLHLY 106
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>Y2028_MYCBO (P64922) Hypothetical protein Mb2028c|
          Length = 295

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 157 SSVVWKRPCPNLEEVSTNLSLIXLQCETRGLLQQGL 264
           S +V+  P P + E+S    ++ L    RG L +GL
Sbjct: 93  SELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGL 128
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>Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061|
          Length = 295

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 157 SSVVWKRPCPNLEEVSTNLSLIXLQCETRGLLQQGL 264
           S +V+  P P + E+S    ++ L    RG L +GL
Sbjct: 93  SELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGL 128
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>VNS1_EHDV2 (P27585) Nonstructural protein NS1 (Hydrophobic tubular protein)|
          Length = 552

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 158 RRWSGNGRAQTWKRCRQT 211
           RRW GNGR QT  + R T
Sbjct: 279 RRWEGNGRPQTLVQMRHT 296
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>YS44_CAEEL (Q09372) Hypothetical protein ZK177.4|
          Length = 655

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 178 AVSRPPTRSRGSMASSRLELLRNISCVILSKRTC 77
           +VS+PP +S GS+      L    +CVI  K +C
Sbjct: 444 SVSQPPMKSTGSLEQQLAALKPLAACVISEKVSC 477
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>FRMD6_HUMAN (Q96NE9) FERM domain-containing protein 6|
          Length = 622

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 204 DKLELDXSXVRDERSASAGTGGGSPHASLARHS 302
           D L+LD   +     AS  + G   H  L+RHS
Sbjct: 353 DNLDLDMDQLEKRSRASGSSAGSMKHKRLSRHS 385
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>MURB1_BACHK (Q6HEQ5) UDP-N-acetylenolpyruvoylglucosamine reductase 1 (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 1)
          Length = 301

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 GLETAVPKLGRGVDKLELDXSXVRDERSASAGTGGGSPHASLA 293
           G+E  V +LG G+D LE++   VR         GGG P   L+
Sbjct: 75  GIEGVVIRLGEGLDHLEVEKHRVR--------VGGGYPLIKLS 109
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>MURB1_BACC1 (Q732F9) UDP-N-acetylenolpyruvoylglucosamine reductase 1 (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 1)
          Length = 301

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 GLETAVPKLGRGVDKLELDXSXVRDERSASAGTGGGSPHASLA 293
           G+E  V +LG G+D LE++   VR         GGG P   L+
Sbjct: 75  GIEGVVIRLGEGLDHLEVEKHRVR--------VGGGYPLIKLS 109
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>MURB1_BACAN (Q81WD1) UDP-N-acetylenolpyruvoylglucosamine reductase 1 (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 1)
          Length = 301

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 GLETAVPKLGRGVDKLELDXSXVRDERSASAGTGGGSPHASLA 293
           G+E  V +LG G+D LE++   VR         GGG P   L+
Sbjct: 75  GIEGVVIRLGEGLDHLEVEKHRVR--------VGGGYPLIKLS 109
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>SHCBA_XENLA (Q6GPE9) SHC SH2 domain-binding protein 1 homolog A|
          Length = 699

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = +1

Query: 172 KRPCPN----LEEVSTNLSLIXLQCETRGLLQ 255
           K P PN    +  VST++S++ LQC TR  LQ
Sbjct: 328 KGPRPNGGKVIHVVSTSMSILTLQCLTRERLQ 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,038,660
Number of Sequences: 219361
Number of extensions: 681831
Number of successful extensions: 1931
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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