ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
2gb|AY106981.1| Zea mays PCO102385 mRNA sequence 155 2e-34
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
4dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
5dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
6gb|BT018993.1| Zea mays clone Contig481.F mRNA sequence 98 4e-17
7gb|AY104491.1| Zea mays PCO061820 mRNA sequence 98 4e-17
8dbj|AK067170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
11gb|AC117827.6| Mus musculus chromosome 1, clone RP24-88L2, compl... 42 2.2
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.2
13gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 42 2.2
14gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, c... 42 2.2
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
16gb|AC010090.7| Homo sapiens BAC clone RP11-294G19 from 2, comple... 42 2.2
17gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, compl... 40 8.6
18ref|XM_726323.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.6
19emb|AL445663.10| Human DNA sequence from clone RP11-442A13 on ch... 40 8.6
20emb|AL035563.19|HS1068E13 Human DNA sequence from clone RP5-1068... 40 8.6
21gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 8.6
22gb|BC029555.1| Homo sapiens cDNA clone IMAGE:4799254 40 8.6
23ref|NM_001017545.1| Danio rerio zgc:113339 (zgc:113339), mRNA 40 8.6
24dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 8.6
25gb|BC092160.1| Danio rerio zgc:113339, mRNA (cDNA clone MGC:1133... 40 8.6
26emb|AL138479.4|CNS01DWS Human chromosome 14 DNA sequence BAC R-2... 40 8.6
27emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-7... 40 8.6
28emb|AL953842.8| Zebrafish DNA sequence from clone DKEY-33I11, co... 40 8.6
29gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 8.6 
>dbj|AK065329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I02, full
            insert sequence
          Length = 2023

 Score =  192 bits (97), Expect = 1e-45
 Identities = 202/237 (85%)
 Strand = Plus / Minus

                                                                        
Query: 395  tcaaacagacgtgtaactggtgaatatcttcagtaagctgtcgagtgtttcggggtaaaa 454
            ||||||||| || || |||||||||| |||||||| | |||| || ||||| ||||| ||
Sbjct: 1631 tcaaacagatgtatagctggtgaatagcttcagtaggttgtcaagagtttcagggtagaa 1572

                                                                        
Query: 455  tttcctagcaaaaagatagcatggactctttgatccgttccacaaacatggcttctgtgt 514
             ||||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1571 cttcctagcaaaaagatagcatggtctcttcgatccattccataagcatggcttctgtgt 1512

                                                                        
Query: 515  cacaactttcttgtcatcacttgttacatggatggtctcatcaacggctgttatattctt 574
            || || ||| ||||||||||||||||||||||   | |||||||| ||||||||||||||
Sbjct: 1511 cataagttttttgtcatcacttgttacatggaaattttcatcaacagctgttatattctt 1452

                                                                     
Query: 575  tagtagatcatagctaacatcagcagctgcgtatgaccttggatgccatttcccctc 631
            ||  ||||| ||| | ||||| ||||||   |||||||| ||||||||||| |||||
Sbjct: 1451 taagagatcgtaggtgacatctgcagctctatatgacctcggatgccattttccctc 1395
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>gb|AY106981.1| Zea mays PCO102385 mRNA sequence
          Length = 923

 Score =  155 bits (78), Expect = 2e-34
 Identities = 196/235 (83%), Gaps = 4/235 (1%)
 Strand = Plus / Minus

                                                                       
Query: 397 aaacagacgtgtaactggtgaatatcttcagtaagctgtcgagtgtttcggggtaaaatt 456
           ||||||| ||||||||||| |||  |||||||| | |||| |||| ||| || | ||| |
Sbjct: 582 aaacagatgtgtaactggtaaattgcttcagtaggttgtcaagtgcttcaggattaaact 523

                                                                       
Query: 457 tcctagcaaaaagatagcatggactctttgatccgttccacaaacatggcttctgtgtca 516
           ||||||| ||||||||||| || ||||||||||| ||||||||||| ||||||||  |||
Sbjct: 522 tcctagcgaaaagatagcacggtctctttgatccattccacaaacacggcttctgcatca 463

                                                                       
Query: 517 caactttcttgtcatcacttgttacatggatggtctcatcaacggctgttatattcttta 576
           ||| |||||||||||||||||||||||||| | |||||||||    ||| || ||||| |
Sbjct: 462 caagtttcttgtcatcacttgttacatggaagttctcatcaa----tgtaatgttcttca 407

                                                                  
Query: 577 gtagatcatagctaacatcagcagctgcgtatgaccttggatgccatttcccctc 631
             ||||||||| | |||||| ||||    |||||||||||||||||||| |||||
Sbjct: 406 agagatcataggtgacatcatcagcgctatatgaccttggatgccattttccctc 352
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  117 bits (59), Expect = 5e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                            
Query: 395      tcaaacagacgtgtaactggtgaatatcttcagtaagctgtcgagtgtttcggggtaaaa 454
                ||||||||| || || |||||||||| |||||||| | |||| || ||||| ||||| ||
Sbjct: 26896690 tcaaacagatgtatagctggtgaatagcttcagtaggttgtcaagagtttcagggtagaa 26896749

                                                                            
Query: 455      tttcctagcaaaaagatagcatggactctttgatccgttccacaaacatggcttctgtgt 514
                 ||||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 26896750 cttcctagcaaaaagatagcatggtctcttcgatccattccataagcatggcttctgtgt 26896809

                           
Query: 515      cacaactttct 525
                || || |||||
Sbjct: 26896810 cataagtttct 26896820



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                            
Query: 562      ctgttatattctttagtagatcatagctaacatcagcagctgcgtatgaccttggatgcc 621
                |||||||||||||||  ||||| ||| | ||||| ||||||   |||||||| |||||||
Sbjct: 26897177 ctgttatattctttaagagatcgtaggtgacatctgcagctctatatgacctcggatgcc 26897236

                          
Query: 622      atttcccctc 631
                |||| |||||
Sbjct: 26897237 attttccctc 26897246



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 525      ttgtcatcacttgttacatgga 546
                ||||||||||||||||||||||
Sbjct: 26897052 ttgtcatcacttgttacatgga 26897073
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>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0065C04
          Length = 165270

 Score =  117 bits (59), Expect = 5e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                         
Query: 395   tcaaacagacgtgtaactggtgaatatcttcagtaagctgtcgagtgtttcggggtaaaa 454
             ||||||||| || || |||||||||| |||||||| | |||| || ||||| ||||| ||
Sbjct: 20451 tcaaacagatgtatagctggtgaatagcttcagtaggttgtcaagagtttcagggtagaa 20510

                                                                         
Query: 455   tttcctagcaaaaagatagcatggactctttgatccgttccacaaacatggcttctgtgt 514
              ||||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 20511 cttcctagcaaaaagatagcatggtctcttcgatccattccataagcatggcttctgtgt 20570

                        
Query: 515   cacaactttct 525
             || || |||||
Sbjct: 20571 cataagtttct 20581



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 562   ctgttatattctttagtagatcatagctaacatcagcagctgcgtatgaccttggatgcc 621
             |||||||||||||||  ||||| ||| | ||||| ||||||   |||||||| |||||||
Sbjct: 20938 ctgttatattctttaagagatcgtaggtgacatctgcagctctatatgacctcggatgcc 20997

                       
Query: 622   atttcccctc 631
             |||| |||||
Sbjct: 20998 attttccctc 21007



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 525   ttgtcatcacttgttacatgga 546
             ||||||||||||||||||||||
Sbjct: 20813 ttgtcatcacttgttacatgga 20834
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>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0051O02
          Length = 169532

 Score =  117 bits (59), Expect = 5e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                          
Query: 395    tcaaacagacgtgtaactggtgaatatcttcagtaagctgtcgagtgtttcggggtaaaa 454
              ||||||||| || || |||||||||| |||||||| | |||| || ||||| ||||| ||
Sbjct: 151316 tcaaacagatgtatagctggtgaatagcttcagtaggttgtcaagagtttcagggtagaa 151375

                                                                          
Query: 455    tttcctagcaaaaagatagcatggactctttgatccgttccacaaacatggcttctgtgt 514
               ||||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 151376 cttcctagcaaaaagatagcatggtctcttcgatccattccataagcatggcttctgtgt 151435

                         
Query: 515    cacaactttct 525
              || || |||||
Sbjct: 151436 cataagtttct 151446



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                          
Query: 562    ctgttatattctttagtagatcatagctaacatcagcagctgcgtatgaccttggatgcc 621
              |||||||||||||||  ||||| ||| | ||||| ||||||   |||||||| |||||||
Sbjct: 151803 ctgttatattctttaagagatcgtaggtgacatctgcagctctatatgacctcggatgcc 151862

                        
Query: 622    atttcccctc 631
              |||| |||||
Sbjct: 151863 attttccctc 151872



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 525    ttgtcatcacttgttacatgga 546
              ||||||||||||||||||||||
Sbjct: 151678 ttgtcatcacttgttacatgga 151699
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>gb|BT018993.1| Zea mays clone Contig481.F mRNA sequence
          Length = 1538

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 133/161 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  aaagaatcatgttgaagtcaaacagacgtgtaactggtgaatatcttcagtaagctgtcg 437
            |||||||||||| ||| |||| | || |||||||||| ||||| |||||| | | |||  
Sbjct: 1397 aaagaatcatgtagaactcaagccgatgtgtaactggagaatagcttcagcaggttgttc 1338

                                                                        
Query: 438  agtgtttcggggtaaaatttcctagcaaaaagatagcatggactctttgatccgttccac 497
            |  | ||| |||||||| || ||||||||||||||||| || || |||| ||| ||||||
Sbjct: 1337 aaagattctgggtaaaactttctagcaaaaagatagcagggtctttttgttccattccac 1278

                                                     
Query: 498  aaacatggcttctgtgtcacaactttcttgtcatcacttgt 538
            | ||||||  |||||||||||||||| || |||||||||||
Sbjct: 1277 atacatggggtctgtgtcacaacttttttatcatcacttgt 1237



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 589  taacatcagcagctgcgtatgaccttggatgccatttcccctcgg 633
            ||||||| ||||||   |||||||||||||||||||| |||||||
Sbjct: 1186 taacatctgcagctctatatgaccttggatgccattttccctcgg 1142
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>gb|AY104491.1| Zea mays PCO061820 mRNA sequence
          Length = 891

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 184/229 (80%)
 Strand = Plus / Minus

                                                                       
Query: 405 gtgtaactggtgaatatcttcagtaagctgtcgagtgtttcggggtaaaatttcctagca 464
           ||||||||||  |||| |||||| ||| |||  || | ||| ||||| || || ||||||
Sbjct: 771 gtgtaactggaaaatagcttcagcaagttgttcagagattctgggtagaactttctagca 712

                                                                       
Query: 465 aaaagatagcatggactctttgatccgttccacaaacatggcttctgtgtcacaactttc 524
           ||||| |||||||| || |||| ||| ||||||| ||||||  || ||||||||||||||
Sbjct: 711 aaaaggtagcatggtctttttgttccattccacatacatgggatccgtgtcacaactttc 652

                                                                       
Query: 525 ttgtcatcacttgttacatggatggtctcatcaacggctgttatattctttagtagatca 584
           || ||||||||||| |   |||   ||||||  || |  ||||| |||||||  || |||
Sbjct: 651 ttatcatcacttgtaatgcggaaattctcattgacagacgttatgttctttaagagttca 592

                                                            
Query: 585 tagctaacatcagcagctgcgtatgaccttggatgccatttcccctcgg 633
           ||| ||||||| ||||||   |||||||||||||||||||| |||||||
Sbjct: 591 taggtaacatctgcagctctatatgaccttggatgccattttccctcgg 543
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>dbj|AK067170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098C06, full
            insert sequence
          Length = 1968

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                        
Query: 422  cttcagtaagctgtcgagtgtttcggggtaaaatttcctagcaaaaagatagcatggact 481
            |||||||| | ||| ||| | ||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 1510 cttcagtaggttgttgagagcttctgggtaaaactttctagcaaaaaggtagcatggtct 1451

                                                                     
Query: 482  ctttgatccgttccacaaacatggcttctgtgtcacaactttcttgtcatcacttgt 538
            ||||| ||||||||||| ||| ||  ||  ||||||||||||||| |||||||||||
Sbjct: 1450 ctttgttccgttccacatacagggtgtcattgtcacaactttcttatcatcacttgt 1394



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 38   aaagaatggatcatataataacag 61
            ||||||||||||||||||||||||
Sbjct: 1899 aaagaatggatcatataataacag 1876
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                           
Query: 422     cttcagtaagctgtcgagtgtttcggggtaaaatttcctagcaaaaagatagcatggact 481
               |||||||| | ||| ||| | ||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 4133356 cttcagtaggttgttgagagcttctgggtaaaactttctagcaaaaaggtagcatggtct 4133297

                                                           
Query: 482     ctttgatccgttccacaaacatggcttctgtgtcacaactttct 525
               ||||| ||||||||||| ||| ||  ||  ||||||||||||||
Sbjct: 4133296 ctttgttccgttccacatacagggtgtcattgtcacaactttct 4133253



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 38      aaagaatggatcatataataacag 61
               ||||||||||||||||||||||||
Sbjct: 4133745 aaagaatggatcatataataacag 4133722
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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                         
Query: 422   cttcagtaagctgtcgagtgtttcggggtaaaatttcctagcaaaaagatagcatggact 481
             |||||||| | ||| ||| | ||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 43370 cttcagtaggttgttgagagcttctgggtaaaactttctagcaaaaaggtagcatggtct 43311

                                                         
Query: 482   ctttgatccgttccacaaacatggcttctgtgtcacaactttct 525
             ||||| ||||||||||| ||| ||  ||  ||||||||||||||
Sbjct: 43310 ctttgttccgttccacatacagggtgtcattgtcacaactttct 43267



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 38    aaagaatggatcatataataacag 61
             ||||||||||||||||||||||||
Sbjct: 43759 aaagaatggatcatataataacag 43736
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>gb|AC117827.6| Mus musculus chromosome 1, clone RP24-88L2, complete sequence
          Length = 213655

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   aaacatacaaaaagcacaata 179
             |||||||||||||||||||||
Sbjct: 79904 aaacatacaaaaagcacaata 79924
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 70       caaaaatatgatctccaactccaag 94
                ||||| |||||||||||||||||||
Sbjct: 30515064 caaaactatgatctccaactccaag 30515040
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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
             sequence
          Length = 139872

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 70    caaaaatatgatctccaactccaag 94
             ||||| |||||||||||||||||||
Sbjct: 46637 caaaactatgatctccaactccaag 46613
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>gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, complete sequence
          Length = 188858

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 566   tatattctttagtagatcatagctaacat 594
             |||||||||||||||||||| | ||||||
Sbjct: 41243 tatattctttagtagatcattgttaacat 41215
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 70       caaaaatatgatctccaactccaag 94
                ||||| |||||||||||||||||||
Sbjct: 30606486 caaaactatgatctccaactccaag 30606462
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>gb|AC010090.7| Homo sapiens BAC clone RP11-294G19 from 2, complete sequence
          Length = 115597

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 318   cacaatttttacacgaagaaaagag 342
             ||||||||||| |||||||||||||
Sbjct: 19511 cacaatttttaaacgaagaaaagag 19487
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>gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, complete sequence
          Length = 164190

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    aggaaacatacaaaaagcac 175
              ||||||||||||||||||||
Sbjct: 157144 aggaaacatacaaaaagcac 157163
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>ref|XM_726323.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03412)
           partial mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  aagaatggatcatataataa 58
           ||||||||||||||||||||
Sbjct: 109 aagaatggatcatataataa 128
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>emb|AL445663.10| Human DNA sequence from clone RP11-442A13 on chromosome 9 Contains a
              tumor protein, translationally-controlled 1 (TPT1)
              pseudogene, complete sequence
          Length = 192226

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    aaggacttaaaggaaacata 165
              ||||||||||||||||||||
Sbjct: 124678 aaggacttaaaggaaacata 124697
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>emb|AL035563.19|HS1068E13 Human DNA sequence from clone RP5-1068E13 on chromosome 20p11.21-12.3
            Contains a eukaryotic translation elongation factor 1
            alpha 1 (EEF1A1) pseudogene, a novel gene, the C20orf78
            gene for chromosome 20 open reading frame 78 and the
            C20orf79 gene for chromosome 20 open reading frame 79,
            complete sequence
          Length = 148177

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 44   tggatcatataataacagcatatt 67
            ||||||||||||||| ||||||||
Sbjct: 9459 tggatcatataataatagcatatt 9482
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 416     gaatatcttcagtaagctgt 435
               ||||||||||||||||||||
Sbjct: 2686886 gaatatcttcagtaagctgt 2686867
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>gb|BC029555.1| Homo sapiens cDNA clone IMAGE:4799254
          Length = 1403

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggatcatataataacagcatatt 67
           ||||||||||||||| ||||||||
Sbjct: 917 tggatcatataataatagcatatt 894
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>ref|NM_001017545.1| Danio rerio zgc:113339 (zgc:113339), mRNA
          Length = 3515

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 cttctgtgtcacaactttct 525
           ||||||||||||||||||||
Sbjct: 94  cttctgtgtcacaactttct 75
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     aacccgttgctcgaggccca 296
               ||||||||||||||||||||
Sbjct: 2462230 aacccgttgctcgaggccca 2462249
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>gb|BC092160.1| Danio rerio zgc:113339, mRNA (cDNA clone MGC:113339 IMAGE:7141239),
           complete cds
          Length = 3515

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 cttctgtgtcacaactttct 525
           ||||||||||||||||||||
Sbjct: 94  cttctgtgtcacaactttct 75
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>emb|AL138479.4|CNS01DWS Human chromosome 14 DNA sequence BAC R-242G5 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165228

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 566  tatattctttagtagatcat 585
            ||||||||||||||||||||
Sbjct: 4253 tatattctttagtagatcat 4272
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>emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-785G15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174273

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    tatattctttagtagatcat 585
              ||||||||||||||||||||
Sbjct: 165016 tatattctttagtagatcat 165035
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>emb|AL953842.8| Zebrafish DNA sequence from clone DKEY-33I11, complete sequence
          Length = 225654

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 151   cttaaaggaaacatacaaaaagca 174
             |||||||||||||| |||||||||
Sbjct: 44657 cttaaaggaaacattcaaaaagca 44680
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     aacccgttgctcgaggccca 296
               ||||||||||||||||||||
Sbjct: 1854821 aacccgttgctcgaggccca 1854802


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,581,961
Number of Sequences: 3902068
Number of extensions: 5581961
Number of successful extensions: 103379
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103137
Number of HSP's gapped (non-prelim): 242
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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