ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BYR2_SCHPO (P28829) Protein kinase byr2 (EC 2.7.11.25) (Protein ... 32 0.37
2PKN2_CLOPE (Q8XJL8) Probable serine/threonine protein kinase CPE... 29 3.1

>BYR2_SCHPO (P28829) Protein kinase byr2 (EC 2.7.11.25) (Protein kinase ste8)|
           (MAPK kinase kinase) (MAPKKK)
          Length = 659

 Score = 32.3 bits (72), Expect = 0.37
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 128 PEQEPNFIRSPSPHGPSATTRKGANYVERQNSEMS 24
           P   P+FI  PSP  P++TT +  N +E    + S
Sbjct: 357 PGSSPSFIEQPSPISPTSTTSEDTNTLEEDTDDQS 391



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>PKN2_CLOPE (Q8XJL8) Probable serine/threonine protein kinase CPE1738 (EC|
           2.7.11.1)
          Length = 685

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -1

Query: 146 TIATKFPEQEPNFIRSPSPHGPSATTRKGANYVERQNSEMSYYADDED 3
           TI++K  E E  F R  SP     T    +   E    +  YY DDED
Sbjct: 276 TISSKSAEDEDQFTRVMSPVVVPNTETNNSEPDEDDEDDDEYYEDDED 323


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,155,901
Number of Sequences: 219361
Number of extensions: 245973
Number of successful extensions: 905
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 80,573,946
effective HSP length: 26
effective length of database: 74,870,560
effective search space used: 1796893440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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