ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3n23 |
|---|---|
| Clone Library Name | barley_pub |
>SQV8_CAEEL (Q09363) Probable glucuronosyltransferase sqv-8 (EC 2.4.1.135)| (Vulval invagination protein sqv-8) (Squashed vulva protein 8) Length = 356 Score = 38.5 bits (88), Expect = 0.016 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -3 Query: 565 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQLN 443 G QES F+E L ME LA+ CT++ VW+ E P+L+ Sbjct: 291 GYQESTFLENLGIHRYNMEPLAEMCTKVYVWHTRTEKPKLS 331
>B3GA1_RAT (O35789) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -3 Query: 577 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 277 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_MOUSE (Q9CW73) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -3 Query: 577 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 277 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_HUMAN (Q9P2W7) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -3 Query: 577 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 277 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_CANFA (Q5CB03) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 335 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -3 Query: 577 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 278 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 320
>B3GA2_HUMAN (Q9NPZ5) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 323 Score = 35.8 bits (81), Expect = 0.10 Identities = 16/50 (32%), Positives = 31/50 (62%) Frame = -3 Query: 595 SIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 ++ G + G+QES F++++ E ++E A+NCT+++VW+ E L Sbjct: 260 AVFKRRGSQPGMQESDFLKQITTVE-ELEPKANNCTKVLVWHTRTEKVNL 308
>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 329 Score = 35.8 bits (81), Expect = 0.10 Identities = 16/50 (32%), Positives = 31/50 (62%) Frame = -3 Query: 595 SIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 ++ G + G+QES F++++ E ++E A+NCT+++VW+ E L Sbjct: 266 AVFKRRGSQPGMQESDFLKQITTVE-ELEPKANNCTKVLVWHTRTEKVNL 314
>B3GA1_PANTR (Q5CB04) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 332 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -3 Query: 577 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 275 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 317
>B3GA2_MOUSE (P59270) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 35.4 bits (80), Expect = 0.13 Identities = 16/50 (32%), Positives = 30/50 (60%) Frame = -3 Query: 595 SIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 ++ G + G+QES F++++ E ++E A NCT+++VW+ E L Sbjct: 261 AVFKRRGSQPGMQESDFLKQITTVE-ELEPKASNCTKVLVWHTRTEKVNL 309
>B3GA2_RAT (Q9Z137) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 34.7 bits (78), Expect = 0.23 Identities = 15/50 (30%), Positives = 31/50 (62%) Frame = -3 Query: 595 SIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 ++ G + G+QES F++++ + ++E A+NCT+++VW+ E L Sbjct: 261 AVFKRRGSQPGMQESDFLKQITTVD-ELEPKANNCTKVLVWHTRTEKVNL 309
>B3GA3_HUMAN (O94766) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -3 Query: 565 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G ES + LV D +E A NCTR++VW+ E P++ Sbjct: 278 GHLESSLLSHLV-DPKDLEPRAANCTRVLVWHTRTEKPKM 316
>BGAL_STRTR (P23989) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1026 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -2 Query: 515 NGRPGRQLHPDYGLEFRFGTSSTQLPYWLVAAEE 414 +G+ G P++GLEF G+ T L Y+ AEE Sbjct: 864 DGKAGLPNFPEFGLEFAIGSQFTNLSYYGYGAEE 897
>B3GA3_MOUSE (P58158) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 565 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G ES + LV D +E A NCT+++VW+ E P++ Sbjct: 278 GHLESSLLSHLV-DPKDLEPRAANCTQVLVWHTRTEKPKM 316
>B3GA3_CRIGR (Q9WU47) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 565 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G ES + LV D +E A NCT+++VW+ E P++ Sbjct: 278 GHLESSLLSHLV-DPKDLEPRAANCTQVLVWHTRTEKPKM 316
>YC9E_SCHPO (Q09888) Hypothetical protein C584.14 in chromosome III| Length = 431 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 464 IEIPDHNPGAIVCQAFHLTLILDKPLNKSRLLQATPAT*MEYNRSYAGV 610 +E P + + + HL +LDK + K L++ T A+ ME Y V Sbjct: 274 MEFETSQPSSSISEIIHLLAVLDKRIPKKTLVEKTYASSMELQELYNAV 322
>AKA11_HUMAN (Q9UKA4) A-kinase anchor protein 11 (Protein kinase A-anchoring| protein 11) (PRKA11) (A kinase anchor protein 220 kDa) (AKAP 220) (hAKAP220) Length = 1901 Score = 30.4 bits (67), Expect = 4.2 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Frame = -3 Query: 529 EDESQMEGLADNCTRIMVWNFDLEP----PQLNYPTGWLLQKNLDAT*LSWCPIFLFAHT 362 E E ++EGL + +++ N D+EP PQL WL+ + L+ H Sbjct: 1795 EHEDEVEGLGQDGKTLLITNIDMEPCTVDPQLRIILQWLIASEAEVA-------ELYFHD 1847 Query: 361 SAIDGFLNL 335 SA F+ L Sbjct: 1848 SANKEFMLL 1856
>B3GI_DROME (O97422) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase I (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase I) (Glucuronosyltransferase-I) (DmGlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 306 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -3 Query: 565 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 446 G QES + L + Q++ LA+ CT ++VW+ E +L Sbjct: 249 GYQESEILRHLTTRD-QLQPLANRCTDVLVWHTRTEKTKL 287
>YE35_SCHPO (O13890) UPF0061 protein C20G4.05c| Length = 568 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 65 AMETNFYICKVIYACIITNPNKER 136 +ME Y K++ ACI NPN ER Sbjct: 442 SMENEEYAAKLMQACICLNPNNER 465 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,950,276 Number of Sequences: 219361 Number of extensions: 1387502 Number of successful extensions: 3161 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3161 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
