ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags4c23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139B06, full insert sequence Length = 1030 Score = 739 bits (373), Expect = 0.0 Identities = 535/589 (90%) Strand = Plus / Minus Query: 79 aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 138 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 733 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 674 Query: 139 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 198 |||| || ||||| |||||| | |||||||||||||||||||||||||| | ||||| Sbjct: 673 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 614 Query: 199 ctggtcatcctttttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacag 258 |||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || Sbjct: 613 ctggtcatccttcttgaagtcgggcagattcttggttgcctccttctctgtctcaaaaag 554 Query: 259 ctccccttcagtcttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaa 318 || || || |||||||| ||| | ||||||||||||| |||||||||||||||||||| Sbjct: 553 ttcaccctcggtcttcttggcctttgccttcttgtcccgggcaaagtacttgtcatcaaa 494 Query: 319 cttctccaccttaacaccagagatgtcaacctttgtggatgtggcaatgacataagcctg 378 ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 493 cttatccaccttaacaccagagatgtcaaccttcgtggatgtggcaatgacgtaggcctg 434 Query: 379 gttcacccggcgaactgggacaccattgatcttgaaaggtccagtgatgaggagcaggcc 438 |||||| ||||| | || || ||||||||||| |||||||| ||||||||||||||||| Sbjct: 433 gttcacacggcggatgggcactccattgatcttaaaaggtccggtgatgaggagcaggcc 374 Query: 439 agacttgagctgcttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggat 498 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 373 ggacttgagctgcttgaggaacacgacgcgcttccccatgtacctcccggcgagcaggat 314 Query: 499 cagcaccgtgccgggcgtgatggtcgacctgagcttggtaggtttgggcttgcgggtgct 558 ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 313 cagcaccgtccccggcgtgatggtcgacctgagcttggtagggttggccttgcgggtgct 254 Query: 559 ggcggtgcggggcttgacgtcgtcggcggggtagaacttgggctcggcgacggcggctgg 618 || || ||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 253 gggggcgcggggcttgacgtcgtcggcggggtagaacttgggctcggcggcggcggcggg 194 Query: 619 cttctcggcctttgggaaggctccgccgttcttggccttgatggcccag 667 ||| ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 193 cttgccggccttggggaaggtgccgccgttcttggccttgatggcccag 145
>ref|XM_466485.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 733 bits (370), Expect = 0.0 Identities = 532/586 (90%) Strand = Plus / Minus Query: 82 ttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagata 141 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 660 ttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaagata 601 Query: 142 gttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctg 201 | || ||||| |||||| | |||||||||||||||||||||||||| | |||||||| Sbjct: 600 ggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagccttctg 541 Query: 202 gtcatcctttttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctc 261 ||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || || Sbjct: 540 gtcatccttcttgaagtcgggcagattcttggttgcctccttctctgtctcaaaaagttc 481 Query: 262 cccttcagtcttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaactt 321 || || |||||||| ||| | ||||||||||||| ||||||||||||||||||||||| Sbjct: 480 accctcggtcttcttggcctttgccttcttgtcccgggcaaagtacttgtcatcaaactt 421 Query: 322 ctccaccttaacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggtt 381 ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 420 atccaccttaacaccagagatgtcaaccttcgtggatgtggcaatgacgtaggcctggtt 361 Query: 382 cacccggcgaactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccaga 441 ||| ||||| | || || ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 360 cacacggcggatgggcactccattgatcttaaaaggtccggtgatgaggagcaggccgga 301 Query: 442 cttgagctgcttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggatcag 501 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 300 cttgagctgcttgaggaacacgacgcgcttccccatgtacctcccggcgagcaggatcag 241 Query: 502 caccgtgccgggcgtgatggtcgacctgagcttggtaggtttgggcttgcgggtgctggc 561 |||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 240 caccgtccccggcgtgatggtcgacctgagcttggtagggttggccttgcgggtgctggg 181 Query: 562 ggtgcggggcttgacgtcgtcggcggggtagaacttgggctcggcgacggcggctggctt 621 || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 180 ggcgcggggcttgacgtcgtcggcggggtagaacttgggctcggcggcggcggcgggctt 121 Query: 622 ctcggcctttgggaaggctccgccgttcttggccttgatggcccag 667 ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 120 gccggccttggggaaggtgccgccgttcttggccttgatggcccag 75
>gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, complete cds Length = 686 Score = 674 bits (340), Expect = 0.0 Identities = 526/588 (89%) Strand = Plus / Minus Query: 79 aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 138 |||||| |||||||||||||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 682 aacttaaaaggtcatctcatgcggcttgtcgccatccctgagggagaaccgggcaccaag 623 Query: 139 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 198 ||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 622 ataatttttaaggtctgggacggcatcgatagccttgatcaactcagcgtcaatgacctt 563 Query: 199 ctggtcatcctttttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacag 258 |||||||||||| |||||||| |||| ||||||||||||||||| || | |||||| || Sbjct: 562 ctggtcatccttcttgaagtctggcaaattcttggttgcctccttatccgactcaaatag 503 Query: 259 ctccccttcagtcttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaa 318 ||| || ||||||||||||||||| | |||||| |||||||| ||||||||||||||||| Sbjct: 502 ctcgccctcagtcttctttgccctagtcttcttctccctagcgaagtacttgtcatcaaa 443 Query: 319 cttctccaccttaacaccagagatgtcaacctttgtggatgtggcaatgacataagcctg 378 ||||| ||| ||||| ||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 442 cttctgcacattaaccttagagatgtcgacctttgtggatgtggcaatgacgtaagcctg 383 Query: 379 gttcacccggcgaactgggacaccattgatcttgaaaggtccagtgatgaggagcaggcc 438 |||||| | ||| | ||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 382 gttcactctgcggattggcacgccattgatcttgaaaggtccagtgatgaggagaaggcc 323 Query: 439 agacttgagctgcttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggat 498 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 322 ggactggagctgcttgaggaacaccacgcgctttcccatgtacctccccgcgagcaggat 263 Query: 499 cagcaccgtgccgggcgtgatggtcgacctgagcttggtaggtttgggcttgcgggtgct 558 |||||||||||| || ||||||||||||||||||||||| || | ||||||||| ||||| Sbjct: 262 cagcaccgtgcccggtgtgatggtcgacctgagcttggtgggatggggcttgcgtgtgct 203 Query: 559 ggcggtgcggggcttgacgtcgtcggcggggtagaacttgggctcggcgacggcggctgg 618 ||||||| |||||||| || || ||||| ||||||||||||||||||| |||||| || Sbjct: 202 cacggtgcgtggcttgacatcatcagcgggatagaacttgggctcggcgatggcggccgg 143 Query: 619 cttctcggcctttgggaaggctccgccgttcttggccttgatggccca 666 |||||||||||| || ||||| ||||||| |||||||||||||||||| Sbjct: 142 cttctcggccttgggcaaggcgccgccgtgcttggccttgatggccca 95
>ref|XM_472843.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 669 Score = 533 bits (269), Expect = e-148 Identities = 505/585 (86%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 91 catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 150 |||||| ||||||||||| |||||||||||||| ||||| |||||||| || | || || Sbjct: 660 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 601 Query: 151 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 210 || |||||||| || ||||| ||||||||||| ||||| | | |||||||| ||||| Sbjct: 600 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 541 Query: 211 tttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctccccttcagt 270 |||||| || ||||||||||||||||||||||||||||||||||| || || || || || Sbjct: 540 tttgaactccggcaggttcttggttgcctccttctcagtctcaaaaagttcaccctcggt 481 Query: 271 cttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaacttctccacctt 330 |||||| ||| | |||||||||||||| |||||||||||||||||||||||||| || Sbjct: 480 cttcttcgccttctgcttcttgtccctagagaagtacttgtcatcaaacttctccacatt 421 Query: 331 aacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcg 390 |||||||||||| |||||||||||||| || |||||||| || | ||||||||| ||||| Sbjct: 420 aacaccagagatatcaacctttgtggacgtagcaatgacgtagggctggttcacacggcg 361 Query: 391 aactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccagacttgagctg 450 | || || ||||||||||| |||||||| |||| ||| |||||||| || |||||||| Sbjct: 360 gatcggaactccattgatcttaaaaggtccggtgacgagaagcaggccggatttgagctg 301 Query: 451 cttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggatcagcaccgtgcc 510 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| || || Sbjct: 300 cttgaggaacacgacgcgcttccccatgaacctcccggcgagcaggatcagcactgtccc 241 Query: 511 gggcgtgatggtcgacctgagcttggtaggtttgggcttgcgggtgctggcggtgcgggg 570 |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 240 aggcgtgatggacgacctgagcttggtagggttgggcttgcgggtgctgggctggcgggg 181 Query: 571 cttgacgtcgtcggcggggtagaacttgggctcggcgacggcggct---------ggctt 621 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 180 cttgacgtcgtcggcggggtagaacttgggcgcggcggcggcggctgcggcggcgggctt 121 Query: 622 ctcggcctttgggaaggctccgccgttcttggccttgatggccca 666 ||||||||| |||||||| ||||||| |||||||||||||||||| Sbjct: 120 ctcggccttggggaaggcgccgccgtgcttggccttgatggccca 76
>dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D20, full insert sequence Length = 933 Score = 533 bits (269), Expect = e-148 Identities = 505/585 (86%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 91 catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 150 |||||| ||||||||||| |||||||||||||| ||||| |||||||| || | || || Sbjct: 714 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 655 Query: 151 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 210 || |||||||| || ||||| ||||||||||| ||||| | | |||||||| ||||| Sbjct: 654 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 595 Query: 211 tttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctccccttcagt 270 |||||| || ||||||||||||||||||||||||||||||||||| || || || || || Sbjct: 594 tttgaactccggcaggttcttggttgcctccttctcagtctcaaaaagttcaccctcggt 535 Query: 271 cttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaacttctccacctt 330 |||||| ||| | |||||||||||||| |||||||||||||||||||||||||| || Sbjct: 534 cttcttcgccttctgcttcttgtccctagagaagtacttgtcatcaaacttctccacatt 475 Query: 331 aacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcg 390 |||||||||||| |||||||||||||| || |||||||| || | ||||||||| ||||| Sbjct: 474 aacaccagagatatcaacctttgtggacgtagcaatgacgtagggctggttcacacggcg 415 Query: 391 aactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccagacttgagctg 450 | || || ||||||||||| |||||||| |||| ||| |||||||| || |||||||| Sbjct: 414 gatcggaactccattgatcttaaaaggtccggtgacgagaagcaggccggatttgagctg 355 Query: 451 cttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggatcagcaccgtgcc 510 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| || || Sbjct: 354 cttgaggaacacgacgcgcttccccatgaacctcccggcgagcaggatcagcactgtccc 295 Query: 511 gggcgtgatggtcgacctgagcttggtaggtttgggcttgcgggtgctggcggtgcgggg 570 |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 294 aggcgtgatggacgacctgagcttggtagggttgggcttgcgggtgctgggctggcgggg 235 Query: 571 cttgacgtcgtcggcggggtagaacttgggctcggcgacggcggct---------ggctt 621 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 234 cttgacgtcgtcggcggggtagaacttgggcgcggcggcggcggctgcggcggcgggctt 175 Query: 622 ctcggcctttgggaaggctccgccgttcttggccttgatggccca 666 ||||||||| |||||||| ||||||| |||||||||||||||||| Sbjct: 174 ctcggccttggggaaggcgccgccgtgcttggccttgatggccca 130
>gb|AY103559.1| Zea mays PCO112591 mRNA sequence Length = 1361 Score = 492 bits (248), Expect = e-136 Identities = 494/576 (85%) Strand = Plus / Minus Query: 91 catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 150 ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | || || Sbjct: 1055 catctcatggggcttgtcaccatccctgagagagaaccgggcgccaagataggttttcag 996 Query: 151 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 210 || ||||||| |||||||||||||||| ||| ||| | ||||||||||||||||| Sbjct: 995 ctccaggacagcctcgatagccttgatcagagcagaatccacagccttctggtcatcctt 936 Query: 211 tttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctccccttcagt 270 |||||||||||||| ||||| ||||||||| || |||||||| ||||| || || || Sbjct: 935 cttgaagtcaggcagtgacttggatgcctccttttctgtctcaaaaagctcgccctcggt 876 Query: 271 cttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaacttctccacctt 330 |||||| || | |||||| ||||| ||||||||||||||||||||||| | || | Sbjct: 875 cttcttcaccttctgcttcttctccctggcaaagtacttgtcatcaaacttggcgacatc 816 Query: 331 aacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcg 390 |||||||||||||||||| || || ||||| ||||||||||| | ||||||||| ||||| Sbjct: 815 aacaccagagatgtcaactttggttgatgtagcaatgacataggtctggttcacacggcg 756 Query: 391 aactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccagacttgagctg 450 | || || ||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 755 gatcggtactccattgatcttgaaaggcccagagataaggagcaggccagacttgagctg 696 Query: 451 cttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggatcagcaccgtgcc 510 |||||| |||||||| | |||||||||| | | ||| ||||| |||||||||||||| || Sbjct: 695 cttgagaaacaccactctcttccccatgaagcgccctgcgaggaggatcagcaccgtccc 636 Query: 511 gggcgtgatggtcgacctgagcttggtaggtttgggcttgcgggtgctggcggtgcgggg 570 ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||| Sbjct: 635 aggcgtgatgctcgacctgagcttggtaggcttaggcttgcgggtgctgggaacgcgggg 576 Query: 571 cttgacgtcgtcggcggggtagaacttgggctcggcgacggcggctggcttctcggcctt 630 ||||||||||||||| |||||||||||||| || || ||||||| | ||| |||||||| Sbjct: 575 cttgacgtcgtcggcagggtagaacttgggttccacggcggcggcggccttgtcggcctt 516 Query: 631 tgggaaggctccgccgttcttggccttgatggccca 666 |||||||| |||||||||||||||||||||||||| Sbjct: 515 ggggaaggcgccgccgttcttggccttgatggccca 480
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 200 bits (101), Expect = 4e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 79 aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 138 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22901790 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 22901849 Query: 139 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 198 |||| || ||||| |||||| | |||||||||||||||||||||||||| | ||||| Sbjct: 22901850 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 22901909 Query: 199 ctggtcatcctttttgaagtcaggcaggttcttggttgcct 239 |||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 22901910 ctggtcatccttcttgaagtcgggcagattcttggttgcct 22901950 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Plus Query: 524 gacctgagcttggtaggtttgggcttgcgggtgctggcggtgcggggcttgacgtcgtcg 583 ||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||| Sbjct: 22903263 gacctgagcttggtagggttggccttgcgggtgctgggggcgcggggcttgacgtcgtcg 22903322 Query: 584 gcggggtagaacttgggctcggcgacggcggctggcttctcggcctttgggaaggctccg 643 |||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||| ||| Sbjct: 22903323 gcggggtagaacttgggctcggcggcggcggcgggcttgccggccttggggaaggtgccg 22903382 Query: 644 ccgttcttggccttgatggcccag 667 |||||||||||||||||||||||| Sbjct: 22903383 ccgttcttggccttgatggcccag 22903406 Score = 190 bits (96), Expect = 4e-45 Identities = 162/184 (88%) Strand = Plus / Plus Query: 237 cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 296 |||||||||| |||||||| || || || || |||||||| ||| | ||||||||||||| Sbjct: 22902042 cctccttctctgtctcaaaaagttcaccctcggtcttcttggcctttgccttcttgtccc 22902101 Query: 297 tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 356 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 22902102 gggcaaagtacttgtcatcaaacttatccaccttaacaccagagatgtcaaccttcgtgg 22902161 Query: 357 atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 416 ||||||||||||| || ||||||||||| ||||| | || || ||||||||||| |||| Sbjct: 22902162 atgtggcaatgacgtaggcctggttcacacggcggatgggcactccattgatcttaaaag 22902221 Query: 417 gtcc 420 |||| Sbjct: 22902222 gtcc 22902225 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 422 gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 481 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 22903064 gtgatgaggagcaggccggacttgagctgcttgaggaacacgacgcgcttccccatgtac 22903123 Query: 482 ctcccagcgagcaggatcagcaccgtgccgggcgtgatggtcgacctg 529 ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 22903124 ctcccggcgagcaggatcagcaccgtccccggcgtgatggtcgacctg 22903171
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 200 bits (101), Expect = 4e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 79 aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 138 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 21592 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 21651 Query: 139 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 198 |||| || ||||| |||||| | |||||||||||||||||||||||||| | ||||| Sbjct: 21652 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 21711 Query: 199 ctggtcatcctttttgaagtcaggcaggttcttggttgcct 239 |||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21712 ctggtcatccttcttgaagtcgggcagattcttggttgcct 21752 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Plus Query: 524 gacctgagcttggtaggtttgggcttgcgggtgctggcggtgcggggcttgacgtcgtcg 583 ||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||| Sbjct: 23065 gacctgagcttggtagggttggccttgcgggtgctgggggcgcggggcttgacgtcgtcg 23124 Query: 584 gcggggtagaacttgggctcggcgacggcggctggcttctcggcctttgggaaggctccg 643 |||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||| ||| Sbjct: 23125 gcggggtagaacttgggctcggcggcggcggcgggcttgccggccttggggaaggtgccg 23184 Query: 644 ccgttcttggccttgatggcccag 667 |||||||||||||||||||||||| Sbjct: 23185 ccgttcttggccttgatggcccag 23208 Score = 190 bits (96), Expect = 4e-45 Identities = 162/184 (88%) Strand = Plus / Plus Query: 237 cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 296 |||||||||| |||||||| || || || || |||||||| ||| | ||||||||||||| Sbjct: 21844 cctccttctctgtctcaaaaagttcaccctcggtcttcttggcctttgccttcttgtccc 21903 Query: 297 tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 356 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 21904 gggcaaagtacttgtcatcaaacttatccaccttaacaccagagatgtcaaccttcgtgg 21963 Query: 357 atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 416 ||||||||||||| || ||||||||||| ||||| | || || ||||||||||| |||| Sbjct: 21964 atgtggcaatgacgtaggcctggttcacacggcggatgggcactccattgatcttaaaag 22023 Query: 417 gtcc 420 |||| Sbjct: 22024 gtcc 22027 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 422 gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 481 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 22866 gtgatgaggagcaggccggacttgagctgcttgaggaacacgacgcgcttccccatgtac 22925 Query: 482 ctcccagcgagcaggatcagcaccgtgccgggcgtgatggtcgacctg 529 ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 22926 ctcccggcgagcaggatcagcaccgtccccggcgtgatggtcgacctg 22973
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 200 bits (101), Expect = 4e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 79 aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 138 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135128 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 135187 Query: 139 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 198 |||| || ||||| |||||| | |||||||||||||||||||||||||| | ||||| Sbjct: 135188 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 135247 Query: 199 ctggtcatcctttttgaagtcaggcaggttcttggttgcct 239 |||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 135248 ctggtcatccttcttgaagtcgggcagattcttggttgcct 135288 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Plus Query: 524 gacctgagcttggtaggtttgggcttgcgggtgctggcggtgcggggcttgacgtcgtcg 583 ||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||| Sbjct: 136601 gacctgagcttggtagggttggccttgcgggtgctgggggcgcggggcttgacgtcgtcg 136660 Query: 584 gcggggtagaacttgggctcggcgacggcggctggcttctcggcctttgggaaggctccg 643 |||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||| ||| Sbjct: 136661 gcggggtagaacttgggctcggcggcggcggcgggcttgccggccttggggaaggtgccg 136720 Query: 644 ccgttcttggccttgatggcccag 667 |||||||||||||||||||||||| Sbjct: 136721 ccgttcttggccttgatggcccag 136744 Score = 190 bits (96), Expect = 4e-45 Identities = 162/184 (88%) Strand = Plus / Plus Query: 237 cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 296 |||||||||| |||||||| || || || || |||||||| ||| | ||||||||||||| Sbjct: 135380 cctccttctctgtctcaaaaagttcaccctcggtcttcttggcctttgccttcttgtccc 135439 Query: 297 tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 356 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 135440 gggcaaagtacttgtcatcaaacttatccaccttaacaccagagatgtcaaccttcgtgg 135499 Query: 357 atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 416 ||||||||||||| || ||||||||||| ||||| | || || ||||||||||| |||| Sbjct: 135500 atgtggcaatgacgtaggcctggttcacacggcggatgggcactccattgatcttaaaag 135559 Query: 417 gtcc 420 |||| Sbjct: 135560 gtcc 135563 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 422 gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 481 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 136402 gtgatgaggagcaggccggacttgagctgcttgaggaacacgacgcgcttccccatgtac 136461 Query: 482 ctcccagcgagcaggatcagcaccgtgccgggcgtgatggtcgacctg 529 ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 136462 ctcccggcgagcaggatcagcaccgtccccggcgtgatggtcgacctg 136509
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 159 bits (80), Expect = 1e-35 Identities = 133/152 (87%), Gaps = 9/152 (5%) Strand = Plus / Plus Query: 524 gacctgagcttggtaggtttgggcttgcgggtgctggcggtgcggggcttgacgtcgtcg 583 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 80735 gacctgagcttggtagggttgggcttgcgggtgctgggctggcggggcttgacgtcgtcg 80794 Query: 584 gcggggtagaacttgggctcggcgacggcggct---------ggcttctcggcctttggg 634 |||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 80795 gcggggtagaacttgggcgcggcggcggcggctgcggcggcgggcttctcggccttgggg 80854 Query: 635 aaggctccgccgttcttggccttgatggccca 666 ||||| ||||||| |||||||||||||||||| Sbjct: 80855 aaggcgccgccgtgcttggccttgatggccca 80886 Score = 159 bits (80), Expect = 1e-35 Identities = 158/184 (85%) Strand = Plus / Plus Query: 237 cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 296 ||||||||||||||||||| || || || || |||||||| ||| | ||||||||||| Sbjct: 79304 cctccttctcagtctcaaaaagttcaccctcggtcttcttcgccttctgcttcttgtccc 79363 Query: 297 tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 356 ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 79364 tagagaagtacttgtcatcaaacttctccacattaacaccagagatatcaacctttgtgg 79423 Query: 357 atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 416 | || |||||||| || | ||||||||| ||||| | || || ||||||||||| |||| Sbjct: 79424 acgtagcaatgacgtagggctggttcacacggcggatcggaactccattgatcttaaaag 79483 Query: 417 gtcc 420 |||| Sbjct: 79484 gtcc 79487 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 422 gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 481 |||| ||| |||||||| || |||||||||||||||||||| ||||||||||||||| || Sbjct: 80536 gtgacgagaagcaggccggatttgagctgcttgaggaacacgacgcgcttccccatgaac 80595 Query: 482 ctcccagcgagcaggatcagcaccgtgccgggcgtgatggtcgacctg 529 ||||| ||||||||||||||||| || || |||||||||| ||||||| Sbjct: 80596 ctcccggcgagcaggatcagcactgtcccaggcgtgatggacgacctg 80643 Score = 113 bits (57), Expect = 8e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 91 catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 150 |||||| ||||||||||| |||||||||||||| ||||| |||||||| || | || || Sbjct: 79067 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 79126 Query: 151 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 210 || |||||||| || ||||| ||||||||||| ||||| | | |||||||| ||||| Sbjct: 79127 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 79186 Query: 211 tttgaagtcaggcaggttcttggttgcct 239 |||||| || ||||||||||||||||||| Sbjct: 79187 tttgaactccggcaggttcttggttgcct 79215
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 159 bits (80), Expect = 1e-35 Identities = 133/152 (87%), Gaps = 9/152 (5%) Strand = Plus / Plus Query: 524 gacctgagcttggtaggtttgggcttgcgggtgctggcggtgcggggcttgacgtcgtcg 583 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 23638054 gacctgagcttggtagggttgggcttgcgggtgctgggctggcggggcttgacgtcgtcg 23638113 Query: 584 gcggggtagaacttgggctcggcgacggcggct---------ggcttctcggcctttggg 634 |||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 23638114 gcggggtagaacttgggcgcggcggcggcggctgcggcggcgggcttctcggccttgggg 23638173 Query: 635 aaggctccgccgttcttggccttgatggccca 666 ||||| ||||||| |||||||||||||||||| Sbjct: 23638174 aaggcgccgccgtgcttggccttgatggccca 23638205 Score = 159 bits (80), Expect = 1e-35 Identities = 158/184 (85%) Strand = Plus / Plus Query: 237 cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 296 ||||||||||||||||||| || || || || |||||||| ||| | ||||||||||| Sbjct: 23636623 cctccttctcagtctcaaaaagttcaccctcggtcttcttcgccttctgcttcttgtccc 23636682 Query: 297 tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 356 ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 23636683 tagagaagtacttgtcatcaaacttctccacattaacaccagagatatcaacctttgtgg 23636742 Query: 357 atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 416 | || |||||||| || | ||||||||| ||||| | || || ||||||||||| |||| Sbjct: 23636743 acgtagcaatgacgtagggctggttcacacggcggatcggaactccattgatcttaaaag 23636802 Query: 417 gtcc 420 |||| Sbjct: 23636803 gtcc 23636806 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 422 gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 481 |||| ||| |||||||| || |||||||||||||||||||| ||||||||||||||| || Sbjct: 23637855 gtgacgagaagcaggccggatttgagctgcttgaggaacacgacgcgcttccccatgaac 23637914 Query: 482 ctcccagcgagcaggatcagcaccgtgccgggcgtgatggtcgacctg 529 ||||| ||||||||||||||||| || || |||||||||| ||||||| Sbjct: 23637915 ctcccggcgagcaggatcagcactgtcccaggcgtgatggacgacctg 23637962 Score = 113 bits (57), Expect = 8e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 91 catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 150 |||||| ||||||||||| |||||||||||||| ||||| |||||||| || | || || Sbjct: 23636386 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 23636445 Query: 151 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 210 || |||||||| || ||||| ||||||||||| ||||| | | |||||||| ||||| Sbjct: 23636446 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 23636505 Query: 211 tttgaagtcaggcaggttcttggttgcct 239 |||||| || ||||||||||||||||||| Sbjct: 23636506 tttgaactccggcaggttcttggttgcct 23636534
>emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16 Length = 1015 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 302 aagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtggatgtg 361 |||||||||||||||||||||||||| || |||||||| ||||||||||| || || ||| Sbjct: 541 aagtacttgtcatcaaacttctccacattgacaccagaaatgtcaaccttggttgaggtg 482 Query: 362 gcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaaggtcca 421 ||||| ||||| || |||||||| || | | ||||||||||||| ||| ||||| ||| Sbjct: 481 gcaataacataggcttggttcacacgcctcagagggacaccattgaccttaaaaggacca 422 Query: 422 gtga 425 |||| Sbjct: 421 gtga 418 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 571 cttgacgtcgtcggcggggtagaacttggg 600 |||||| |||||||| |||||||||||||| Sbjct: 272 cttgacatcgtcggcagggtagaacttggg 243
>dbj|AB167080.1| Curculigo latifolia NAS-2 mRNA for neoculin acid subunit, complete cds Length = 655 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 446 agctgcttgaggaacaccacgcgcttccccatgtacctcccagcgagcaggatcagcacc 505 |||||||| ||||| || || | |||||||||| ||||||| ||||| |||||||||||| Sbjct: 1 agctgcttcaggaaaacgaccctcttccccatgaacctcccggcgagaaggatcagcacc 60 Query: 506 gtgccgggcgtgatggtcgacctgagcttggtaggtttgggcttg 550 || || || || ||| ||| |||||||||||| || ||||||||| Sbjct: 61 gtccccggagtaatgctcggcctgagcttggtgggcttgggcttg 105
>gb|DQ226579.1| Boechera divaricarpa isolate SLW-2-D10 mRNA sequence Length = 693 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 300 caaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtggatg 359 |||| ||||||||||| || ||||| | || || ||||||||||||||||||||||| | Sbjct: 309 caaaatacttgtcatcgaatttctcaatgttgactccagagatgtcaacctttgtggaag 368 Query: 360 tggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaaggtc 419 | |||| ||||| |||||||| || || | | ||| ||||||||||||||||| |||| Sbjct: 369 ttccaatcacataggcctggttaacacgtctcaatggaacaccattgatcttgaatggtc 428 Query: 420 c 420 | Sbjct: 429 c 429
>ref|NM_106066.3| Arabidopsis thaliana structural constituent of ribosome AT1G74060 mRNA, complete cds Length = 967 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 330 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 389 |||| ||||| ||||||||||||||||| || |||||||||| |||||||| || || | Sbjct: 522 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 463 Query: 390 gaactgggacaccattgatcttgaaaggtccagt 423 | || ||||||||||||||||| |||||||| Sbjct: 462 tcagaggaacaccattgatcttgaatggtccagt 429
>gb|AY062622.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (F2P9.7) mRNA, complete cds Length = 942 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 330 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 389 |||| ||||| ||||||||||||||||| || |||||||||| |||||||| || || | Sbjct: 517 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 458 Query: 390 gaactgggacaccattgatcttgaaaggtccagt 423 | || ||||||||||||||||| |||||||| Sbjct: 457 tcagaggaacaccattgatcttgaatggtccagt 424
>emb|BX814470.1|CNS0ADLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 942 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 330 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 389 |||| ||||| ||||||||||||||||| || |||||||||| |||||||| || || | Sbjct: 514 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 455 Query: 390 gaactgggacaccattgatcttgaaaggtccagt 423 | || ||||||||||||||||| |||||||| Sbjct: 454 tcagaggaacaccattgatcttgaatggtccagt 421
>gb|BT002588.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74060) mRNA, complete cds Length = 789 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 330 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 389 |||| ||||| ||||||||||||||||| || |||||||||| |||||||| || || | Sbjct: 454 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 395 Query: 390 gaactgggacaccattgatcttgaaaggtccagt 423 | || ||||||||||||||||| |||||||| Sbjct: 394 tcagaggaacaccattgatcttgaatggtccagt 361
>ref|NM_106064.2| Arabidopsis thaliana structural constituent of ribosome AT1G74050 mRNA, complete cds Length = 1035 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || | | Sbjct: 575 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 516 Query: 395 gggacaccattgatcttgaaaggtccagt 423 || ||||||||||||||||| |||||||| Sbjct: 515 ggaacaccattgatcttgaatggtccagt 487
>ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 structural constituent of ribosome (CNE03060) partial mRNA Length = 764 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 332 acaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcga 391 ||||| |||||||| ||||| ||||| |||||||||||||| |||||| |||| || ||| Sbjct: 480 acaccggagatgtcgaccttggtggaagtggcaatgacataggcctggctcactcgacga 421 Query: 392 actgggacaccattgatcttg 412 | |||||||| |||| |||| Sbjct: 420 agagggacaccgttgagcttg 400
>gb|AY114641.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050) mRNA, complete cds Length = 891 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || | | Sbjct: 449 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 390 Query: 395 gggacaccattgatcttgaaaggtccagt 423 || ||||||||||||||||| |||||||| Sbjct: 389 ggaacaccattgatcttgaatggtccagt 361
>gb|AY081305.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050) mRNA, complete cds Length = 960 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || | | Sbjct: 501 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 442 Query: 395 gggacaccattgatcttgaaaggtccagt 423 || ||||||||||||||||| |||||||| Sbjct: 441 ggaacaccattgatcttgaatggtccagt 413
>gb|AY054573.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050; F2P9.8) mRNA, complete cds Length = 892 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || | | Sbjct: 505 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 446 Query: 395 gggacaccattgatcttgaaaggtccagt 423 || ||||||||||||||||| |||||||| Sbjct: 445 ggaacaccattgatcttgaatggtccagt 417
>gb|AY087325.1| Arabidopsis thaliana clone 3418 mRNA, complete sequence Length = 985 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || | | Sbjct: 575 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 516 Query: 395 gggacaccattgatcttgaaaggtccagt 423 || ||||||||||||||||| |||||||| Sbjct: 515 ggaacaccattgatcttgaatggtccagt 487
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 332 acaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcga 391 ||||| |||||||| ||||| ||||| |||||||||||||| |||||| |||| || ||| Sbjct: 868852 acaccggagatgtcgaccttggtggaagtggcaatgacataggcctggctcactcgacga 868793 Query: 392 actgggacaccattga 407 | |||||||| |||| Sbjct: 868792 agagggacaccgttga 868777
>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete sequence Length = 108387 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 330 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 389 |||| ||||| ||||||||||||||||| || |||||||||| |||||||| || || | Sbjct: 22757 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 22698 Query: 390 gaactgggacaccattgatcttgaaaggtcc 420 | || ||||||||||||||||| ||||| Sbjct: 22697 tcagaggaacaccattgatcttgaatggtcc 22667 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || | | Sbjct: 25490 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 25431 Query: 395 gggacaccattgatcttgaaaggtcc 420 || ||||||||||||||||| ||||| Sbjct: 25430 ggaacaccattgatcttgaatggtcc 25405
>emb|BX814105.1|CNS0ADRY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 440 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 330 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggtt 381 |||| ||||| ||||||||||||||||| ||| |||| ||||| |||||||| Sbjct: 63 taactccagaaatgtcaacctttgtggaagtgccaatcacataggcctggtt 12
>gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal protein L6 internal polyA variant-like mRNA, complete sequence Length = 950 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 490 gagcaggatcagcaccgtgccgggcgtgatgg 521 ||||||||| |||||||||||||| ||||||| Sbjct: 493 gagcaggatgagcaccgtgccgggggtgatgg 462 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 acctttgtggatgtggcaat 366 |||||||||||||||||||| Sbjct: 636 acctttgtggatgtggcaat 617
>gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal protein L6 internal polyA variant-like mRNA, complete sequence Length = 959 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 490 gagcaggatcagcaccgtgccgggcgtgatgg 521 ||||||||| |||||||||||||| ||||||| Sbjct: 503 gagcaggatgagcaccgtgccgggggtgatgg 472 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 acctttgtggatgtggcaat 366 |||||||||||||||||||| Sbjct: 646 acctttgtggatgtggcaat 627
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence Length = 93173 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 301 aaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtggatgt 360 ||||||||||||||||| || ||||| |||||||| ||||| || || || || ||||| Sbjct: 486 aaagtacttgtcatcaaggttatccacattaacaccggagatatcgactttggttgatgt 427 Query: 361 ggcaatgacataagcctggttcac 384 |||| ||||| ||||| ||||| Sbjct: 426 accaatcacataggcctgattcac 403
>dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal protein L6 CgRPL6, partial cds Length = 609 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 440 gacttgagctgcttgaggaacaccacgcgctt 471 |||| ||||||||||||||| ||||||||||| Sbjct: 224 gactcgagctgcttgaggaataccacgcgctt 193
>emb|BX065431.1|CNS09MNF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC49BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 889 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 505 gcgagcaggatcagcaccttgccgggc 531
>emb|BX065430.1|CNS09MNE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1024 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 440 gcgagcaggatcagcaccttgccgggc 414
>emb|BX062222.1|CNS09K6A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43BF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 932 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 378 gcgagcaggatcagcaccttgccgggc 352
>emb|BX057445.1|CNS09GHL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC37BF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 430 gcgagcaggatcagcaccttgccgggc 404
>emb|BX048593.1|CNS099NP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC23DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 598 gcgagcaggatcagcaccttgccgggc 624
>emb|BX048592.1|CNS099NO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 867 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 434 gcgagcaggatcagcaccttgccgggc 408
>emb|BX047227.1|CNS098LR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 390 gcgagcaggatcagcaccttgccgggc 416
>emb|BX047226.1|CNS098LQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC21BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 904 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 437 gcgagcaggatcagcaccttgccgggc 411
>emb|BX042740.1|CNS09554 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC14DF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 811 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 442 gcgagcaggatcagcaccttgccgggc 416
>ref|XM_321154.2| Anopheles gambiae str. PEST ENSANGP00000020813 (ENSANGG00000018324), partial mRNA Length = 946 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 488 gcgagcaggatcagcaccgtgccgggc 514 |||||||||||||||||| |||||||| Sbjct: 362 gcgagcaggatcagcaccttgccgggc 336
>gb|DQ384529.1| Panax ginseng clone PG6L-6 unknown mRNA Length = 624 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 571 cttgacgtcgtcggcggggtagaacttggg 600 |||||||||||| || |||||||||||||| Sbjct: 288 cttgacgtcgtcagctgggtagaacttggg 259 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 gcaaagtacttgtcatcaaacttctcca 326 |||||||||||||| ||| ||||||||| Sbjct: 560 gcaaagtacttgtcgtcatacttctcca 533
>gb|AY088336.1| Arabidopsis thaliana clone 573 mRNA, complete sequence Length = 832 Score = 44.1 bits (22), Expect = 0.58 Identities = 70/86 (81%) Strand = Plus / Minus Query: 335 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 394 ||||| ||||||||||||||||| || |||| ||||| || ||||| || || | | | Sbjct: 477 ccagaaatgtcaacctttgtggaggttccaatcacataggcttggttaacacgtctcaat 418 Query: 395 gggacaccattgatcttgaaaggtcc 420 || |||||||| |||||||| ||||| Sbjct: 417 ggaacaccattaatcttgaatggtcc 392
>gb|AY674237.1| Ixodes pacificus clone IP_7_60_92_78_CLU ribosomal protein L6 mRNA, complete cds Length = 807 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 431 agcaggccagacttgagctgcttgaggaacaccacgcgctt 471 |||||||| | ||| |||||||| ||||||||||| ||||| Sbjct: 446 agcaggcccgtcttcagctgcttcaggaacaccacacgctt 406
>ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (MG01745.4) partial mRNA Length = 1389 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 cctagcaaagtacttgtcatc 315 ||||||||||||||||||||| Sbjct: 798 cctagcaaagtacttgtcatc 778
>emb|BX649433.4| Zebrafish DNA sequence from clone DKEY-215P16 in linkage group 7, complete sequence Length = 77241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ccaagatagttcttaaggtca 154 ||||||||||||||||||||| Sbjct: 51238 ccaagatagttcttaaggtca 51258
>emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in linkage group 7 Contains a novel gene similar to mouse and rodent CHRNA7 (cholinergic receptor, nicotinic, alpha polypeptide 7), a novel gene and two CpG islands, complete sequence Length = 144076 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ccaagatagttcttaaggtca 154 ||||||||||||||||||||| Sbjct: 62863 ccaagatagttcttaaggtca 62843
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 tcttctttgccctggccttct 290 ||||||||||||||||||||| Sbjct: 139403 tcttctttgccctggccttct 139383
>dbj|AB109375.1| Tribolodon hakonensis GDH mRNA for glutamate dehydrogenase, complete cds Length = 3540 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 446 agctgcttgaggaacaccacgcgcttccc 474 |||||||||||||| ||||| |||||||| Sbjct: 3081 agctgcttgaggaagaccacacgcttccc 3109
>dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-855O10, complete sequence Length = 185766 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 ggcttctcggcctttgggaag 637 ||||||||||||||||||||| Sbjct: 152737 ggcttctcggcctttgggaag 152757
>dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-467L20, complete sequence Length = 188788 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 ggcttctcggcctttgggaag 637 ||||||||||||||||||||| Sbjct: 49824 ggcttctcggcctttgggaag 49844
>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete sequence Length = 198426 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 agtgatgaggagcaggccaga 441 ||||||||||||||||||||| Sbjct: 165237 agtgatgaggagcaggccaga 165257
>gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the hFEN1 gene, complete sequence Length = 185035 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 ggcttctcggcctttgggaag 637 ||||||||||||||||||||| Sbjct: 151494 ggcttctcggcctttgggaag 151474
>gb|BC076927.1| Xenopus tropicalis matrix metalloproteinase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase), mRNA (cDNA clone MGC:89173 IMAGE:7016488), complete cds Length = 2746 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 catcaaacttctccacctta 331 |||||||||||||||||||| Sbjct: 1513 catcaaacttctccacctta 1494
>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete sequence Length = 214489 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 agtgatgaggagcaggccag 440 |||||||||||||||||||| Sbjct: 40024 agtgatgaggagcaggccag 40005
>ref|XM_591972.2| PREDICTED: Bos taurus similar to Sodium/hydrogen exchanger 2 (Na(+)/H(+) exchanger 2) (NHE-2) (Solute carrier family 9 member 2) (H7) (LOC514166), partial mRNA Length = 959 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtacttgtcatcaaacttct 323 |||||||||||||||||||| Sbjct: 25 gtacttgtcatcaaacttct 6
>ref|XM_716459.1| Candida albicans SC5314 putative 26S proteasome regulatory particle subunit Rpn3p (CaO19_3054), mRNA Length = 1446 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtcatcctttttgaagtcag 221 |||||||||||||||||||| Sbjct: 1020 gtcatcctttttgaagtcag 1001
>ref|XM_716188.1| Candida albicans SC5314 putative 26S proteasome regulatory particle subunit Rpn3p (CaO19_10572), mRNA Length = 1446 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtcatcctttttgaagtcag 221 |||||||||||||||||||| Sbjct: 1020 gtcatcctttttgaagtcag 1001
>ref|XM_752221.1| Ustilago maydis 521 hypothetical protein (UM01167.1) partial mRNA Length = 3945 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agaaggtcatctcatggggc 103 |||||||||||||||||||| Sbjct: 2466 agaaggtcatctcatggggc 2485
>ref|XM_533873.2| PREDICTED: Canis familiaris similar to peptidylprolyl isomerase A isoform 1 (LOC609903), mRNA Length = 738 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 aagtacttgtcatcaaacttctcc 325 |||| ||||||||||||||||||| Sbjct: 286 aagttcttgtcatcaaacttctcc 263
>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete sequence Length = 211919 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 agtgatgaggagcaggccag 440 |||||||||||||||||||| Sbjct: 71898 agtgatgaggagcaggccag 71917
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 atggccttctggtcatcctt 210 |||||||||||||||||||| Sbjct: 125642 atggccttctggtcatcctt 125623
>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence Length = 113744 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 aagtacttgtcatcaaactt 321 |||||||||||||||||||| Sbjct: 68034 aagtacttgtcatcaaactt 68015
>gb|AF517879.1| Griffithsia japonica isolate Gj550 ribosome protein L6 mRNA, complete cds Length = 764 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 agctgcttgaggaacaccacgcgc 469 ||||||||||||| |||||||||| Sbjct: 329 agctgcttgaggaccaccacgcgc 306
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cttgatcaactcagcatcaa 191 |||||||||||||||||||| Sbjct: 3482500 cttgatcaactcagcatcaa 3482519
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 cagcaccgtgccgggcgtga 518 |||||||||||||||||||| Sbjct: 143942 cagcaccgtgccgggcgtga 143923
>gb|AY831461.1| Pseudomonas putida plasmid pKW1 putative porin gene, partial cds; ORF2 gene, complete cds; meta operon, complete sequence; and ORF3, and ORF4 genes, complete cds Length = 9632 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tggcaatgacataagcctggttca 383 |||||||| ||||||||||||||| Sbjct: 5022 tggcaatggcataagcctggttca 5045
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 cagcaccgtgccgggcgtga 518 |||||||||||||||||||| Sbjct: 299732 cagcaccgtgccgggcgtga 299713
>ref|NM_001006842.1| Xenopus tropicalis matrix metalloproteinase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) (mmp9), mRNA Length = 2746 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 catcaaacttctccacctta 331 |||||||||||||||||||| Sbjct: 1513 catcaaacttctccacctta 1494
>emb|BX321865.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 10/10 Length = 66094 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 ccgtgccgggcgtgatggtc 523 |||||||||||||||||||| Sbjct: 57135 ccgtgccgggcgtgatggtc 57116
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccagtgatgaggagcaggcc 438 |||||||||||||||||||| Sbjct: 39372 ccagtgatgaggagcaggcc 39353
>emb|AL627426.19| Mouse DNA sequence from clone RP23-168D2 on chromosome 11 Contains the 5' end of a novel gene, complete sequence Length = 96727 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 tcttggccttgatggcccag 667 |||||||||||||||||||| Sbjct: 28543 tcttggccttgatggcccag 28562
>emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on chromosome 11 Contains two novel genes (4930452L02Rik and B430319H21Rik), the 3' end of the gene for a novel protein (1700019I23Rik), the gene for a novel protein (4933407G07Rik), the Pmp22 gene for peripheral myelin protein and a CpG island, complete sequence Length = 219468 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 agtgatgaggagcaggccag 440 |||||||||||||||||||| Sbjct: 90411 agtgatgaggagcaggccag 90430
>dbj|AB226127.1| Aspergillus oryzae cDNA, contig sequence: AoEST2984 Length = 929 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcatctcatggggcttgtcaccgt 113 ||||||| |||||||||||||||| Sbjct: 658 tcatctcgtggggcttgtcaccgt 635
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 600 gctcggcgacggcggctggcttct 623 ||||||||||| |||||||||||| Sbjct: 4556380 gctcggcgacgccggctggcttct 4556403
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 tcatctcatggggcttgtcaccgt 113 ||||||| |||||||||||||||| Sbjct: 769646 tcatctcgtggggcttgtcaccgt 769669
>gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 141266 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aaagtacttgtcatcaaact 320 |||||||||||||||||||| Sbjct: 99726 aaagtacttgtcatcaaact 99707
>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence Length = 189979 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggtcatctcatggggcttgt 107 |||||||||||||||||||| Sbjct: 31984 ggtcatctcatggggcttgt 31965
>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence Length = 137457 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 tcttggccttgatggcccag 667 |||||||||||||||||||| Sbjct: 45590 tcttggccttgatggcccag 45609
>emb|AJ276271.1|CAR276271 Cicer arietinum mRNA for putative 60S ribosomal protein L6 (ORF1) Length = 905 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 632 gggaaggctccgccgttcttggccttgatggcccag 667 ||||| || ||||||| |||||||||||||||||| Sbjct: 158 gggaaagcgccgccgtgtttggccttgatggcccag 123
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 559 ggcggtgcggggcttgacgtcgtcggcg 586 |||| |||||||||||||| |||||||| Sbjct: 2406503 ggcgatgcggggcttgacgccgtcggcg 2406476
>gb|AC078927.20| Homo sapiens 12 BAC RP11-745O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125777 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tcatctcatggggcttgtca 109 |||||||||||||||||||| Sbjct: 108030 tcatctcatggggcttgtca 108049
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttctttgccctggccttc 289 |||||||||||||||||||| Sbjct: 381469 tcttctttgccctggccttc 381488
>emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on chromosome 17, complete sequence Length = 122522 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 tgagctgcttgaggaacaccacgc 467 |||||||| ||||||||||||||| Sbjct: 100732 tgagctgcctgaggaacaccacgc 100709
>gb|U93491.1|MUU93491 Meriones unguiculatus NHE-2 mRNA, partial cds Length = 317 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtacttgtcatcaaacttct 323 |||||||||||||||||||| Sbjct: 83 gtacttgtcatcaaacttct 64
>gb|AY823671.1| Glycine max HDZip I protein mRNA, complete cds Length = 1747 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 644 ccgttcttggccttgatggcccag 667 ||||| |||||||||||||||||| Sbjct: 71 ccgtttttggccttgatggcccag 94 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,552,391 Number of Sequences: 3902068 Number of extensions: 5552391 Number of successful extensions: 121892 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 121453 Number of HSP's gapped (non-prelim): 423 length of query: 667 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 644 effective length of database: 17,143,297,704 effective search space: 11040283721376 effective search space used: 11040283721376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
