>RL22B_ARATH (Q9M9W1) 60S ribosomal protein L22-2|
          Length = 124

 Score =  150 bits (379), Expect = 2e-36
 Identities = 78/102 (76%), Positives = 85/102 (83%)
 Frame = -2

Query: 482 KPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXX 303
           KPV+DKIMEIASLEKFLQERIKV GGKAG LGDSVT+TR+KSK+TVT+DG FS       
Sbjct: 24  KPVDDKIMEIASLEKFLQERIKV-GGKAGALGDSVTITREKSKITVTADGQFSKRYLKYL 82

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 KHNVRDWLRVIAANK+ N+YELRYFNIAENEGEEED
Sbjct: 83  TKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124

>RL22C_ARATH (Q9FE58) 60S ribosomal protein L22-3|
          Length = 124

 Score =  146 bits (369), Expect = 3e-35
 Identities = 76/102 (74%), Positives = 84/102 (82%)
 Frame = -2

Query: 482 KPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXX 303
           KPV+DKIMEIASLEKFLQERIKV GGKAG LGDSV++TR+KSK+TVT+DG FS       
Sbjct: 24  KPVDDKIMEIASLEKFLQERIKV-GGKAGALGDSVSITREKSKITVTADGQFSKRYLKYL 82

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 KHNVRDWLRVIAANK+ N+YELRYFNIAENE EEED
Sbjct: 83  TKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEAEEED 124

>RL22A_ARATH (Q9SRX7) 60S ribosomal protein L22-1|
          Length = 127

 Score =  102 bits (253), Expect = 7e-22
 Identities = 54/102 (52%), Positives = 70/102 (68%)
 Frame = -2

Query: 482 KPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXX 303
           KPV+D I+EIA+LEKFLQERIKV G KAG LG+SV++TR   K+ V ++  FS       
Sbjct: 26  KPVDDTILEIATLEKFLQERIKVRG-KAGALGNSVSITRYNGKINVNANSNFSKRYLKYL 84

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 K+N+RDWLRVIA+NK+ NVYE+RYF I +     E+
Sbjct: 85  TKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126

>RL22_RAT (P47198) 60S ribosomal protein L22|
          Length = 127

 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSV-TVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED IM+ A+ E+FLQERIKV  GKAGNLG  V T+ R KSK+TVTS+  FS       
Sbjct: 27  PVEDGIMDAANFEQFLQERIKV-NGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYL 85

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 K+N+RDWLRV+A +KE   YELRYF I ++E EEED
Sbjct: 86  TKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125

>RL22_PIG (P67985) 60S ribosomal protein L22 (Heparin-binding protein HBp15)|
          Length = 127

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSV-TVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED IM+ A+ E+FLQERIKV  GKAGNLG  V T+ R KSK+TVTS+  FS       
Sbjct: 27  PVEDGIMDAANFEQFLQERIKV-NGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYL 85

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 K+N+RDWLRV+A +KE   YELRYF I ++E EEED
Sbjct: 86  TKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125

>RL22_MOUSE (P67984) 60S ribosomal protein L22 (Heparin-binding protein HBp15)|
          Length = 127

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSV-TVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED IM+ A+ E+FLQERIKV  GKAGNLG  V T+ R KSK+TVTS+  FS       
Sbjct: 27  PVEDGIMDAANFEQFLQERIKV-NGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYL 85

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 K+N+RDWLRV+A +KE   YELRYF I ++E EEED
Sbjct: 86  TKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125

>RL22_HUMAN (P35268) 60S ribosomal protein L22 (Epstein-Barr virus small|
           RNA-associated protein) (EBER-associated protein) (EAP)
           (Heparin-binding protein HBp15)
          Length = 127

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSV-TVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED IM+ A+ E+FLQERIKV  GKAGNLG  V T+ R KSK+TVTS+  FS       
Sbjct: 27  PVEDGIMDAANFEQFLQERIKV-NGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYL 85

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 K+N+RDWLRV+A +KE   YELRYF I ++E EEED
Sbjct: 86  TKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125

>RL22_TRIGR (P13732) 60S ribosomal protein L22 (Development-specific protein|
           217)
          Length = 130

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 55/101 (54%), Positives = 69/101 (68%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXXX 300
           PVED IM+ ++ E+FLQERIKV  GK  NL  ++ + R KSKVTVTS+ AFS        
Sbjct: 32  PVEDGIMDASNFEQFLQERIKV-NGKTKNLTTNIVIERKKSKVTVTSEIAFSKRYLKYLT 90

Query: 299 XXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                K+N+RDWLRV+AANKE   YELRYF I +++ EEED
Sbjct: 91  KKYLKKNNLRDWLRVVAANKES--YELRYFQINQDDEEEED 129

>RL22_XENLA (P50886) 60S ribosomal protein L22|
          Length = 127

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSV-TVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED IM+ A+ E+FL +RIKV  GK GNLG  V ++ R KSK+TV+S+  FS       
Sbjct: 27  PVEDGIMDAANFEQFLHDRIKV-NGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYL 85

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                 K+N+RDWLRV+A +KE   YELRYF I ++E EEED
Sbjct: 86  TKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125

>RL22_GADMO (P52865) 60S ribosomal protein L22 (Fragment)|
          Length = 124

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 50/99 (50%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSV-TVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED IM+ A+ E+FLQERIKV  GK+GNLG+ V ++ R  SK++V S+  FS       
Sbjct: 24  PVEDGIMDAANFEQFLQERIKV-NGKSGNLGNGVVSIERXXSKISVNSEVPFSKRYLKYL 82

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGE 186
                 K+N+RDWLRV+A  KE   YELRYF I ++E E
Sbjct: 83  TKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEE 119

>RL22_DROME (P50887) 60S ribosomal protein L22|
          Length = 299

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 43/99 (43%), Positives = 63/99 (63%)
 Frame = -2

Query: 473 EDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXXXXX 294
           ED IM++A  EK+++ R+KV  GK  NLG++VT  R K K+ V+SD  FS          
Sbjct: 202 EDSIMDVADFEKYIKARLKV-NGKVNNLGNNVTFERSKLKLIVSSDVHFSKAYLKYLTKK 260

Query: 293 XXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
              K+++RDW+RV+A  K+   YELRYF I+ N+ E++D
Sbjct: 261 YLKKNSLRDWIRVVANEKDS--YELRYFRISSNDDEDDD 297

>RL22_SCHPO (Q09668) 60S ribosomal protein L22|
          Length = 117

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -2

Query: 488 APKPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRD-KSKVTVTSDGAFSXXXX 312
           A   V DKI ++A+ EK+L +RIKV  GK GNLG SV V+R+  SK+ V +   FS    
Sbjct: 16  ATAAVNDKIFDVAAFEKYLIDRIKV-DGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYL 74

Query: 311 XXXXXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEE 180
                    KH++RDWLRV++  K   VYELRY+N+     EEE
Sbjct: 75  KYLTKKFLKKHSLRDWLRVVSTKK--GVYELRYYNVVVGNDEEE 116

>RL22_CAEEL (P52819) 60S ribosomal protein L22|
          Length = 130

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLG-DSVTVTRDKSKVTVTSDGAFSXXXXXXX 303
           PVED I+ I  LE FL E+IKV  GK G+L  ++V V   KSKV+V S+  FS       
Sbjct: 30  PVEDGILRIEDLEAFLNEKIKV-NGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYL 88

Query: 302 XXXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEE 183
                 ++++RDWLRV+A NK  N YE+RYF+I  N+GE+
Sbjct: 89  TKKYLKRNSLRDWLRVVAVNK--NTYEVRYFHI--NDGED 124

>RL22A_YEAST (P05749) 60S ribosomal protein L22-A (YL31) (RP4)|
          Length = 120

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 38/101 (37%), Positives = 55/101 (54%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXXX 300
           P E+ + + AS  K+L + IKV G   GNLG++VTVT D + VTV S   FS        
Sbjct: 21  PTENGVFDPASYAKYLIDHIKVEGA-VGNLGNAVTVTEDGTVVTVVSTAKFSGKYLKYLT 79

Query: 299 XXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                K+ +RDW+R ++   + N Y L ++ +   E EEED
Sbjct: 80  KKYLKKNQLRDWIRFVST--KTNEYRLAFYQVTPEEDEEED 118

>RL22B_YEAST (P56628) 60S ribosomal protein L22-B|
          Length = 121

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 34/101 (33%), Positives = 55/101 (54%)
 Frame = -2

Query: 479 PVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKSKVTVTSDGAFSXXXXXXXX 300
           P E+ + + AS  K+L + IKV G   GNLG+++ VT D S VTV S   FS        
Sbjct: 21  PTENGVFDPASYSKYLIDHIKVDGA-VGNLGNAIEVTEDGSIVTVVSSAKFSGKYLKYLT 79

Query: 299 XXXXXKHNVRDWLRVIAANKEXNVYELRYFNIAENEGEEED 177
                K+ +RDW+R ++  +  N Y+L ++ +   + +EE+
Sbjct: 80  KKYLKKNQLRDWIRFVSIRQ--NQYKLVFYQVTPEDADEEE 118

>SAPC_SHIFL (P0AGH7) Peptide transport system permease protein sapC|
          Length = 296

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 406 PPATLMRSWRNFSSDAISMI 465
           PP TL  +WR F SDA +M+
Sbjct: 12  PPGTLRTAWRKFYSDASAMV 31

>SAPC_ECOLI (P0AGH5) Peptide transport system permease protein sapC|
          Length = 296

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 406 PPATLMRSWRNFSSDAISMI 465
           PP TL  +WR F SDA +M+
Sbjct: 12  PPGTLRTAWRKFYSDASAMV 31

>SAPC_ECOL6 (P0AGH6) Peptide transport system permease protein sapC|
          Length = 296

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 406 PPATLMRSWRNFSSDAISMI 465
           PP TL  +WR F SDA +M+
Sbjct: 12  PPGTLRTAWRKFYSDASAMV 31

>PURBA_XENLA (Q6PAC9) Transcriptional activator protein Pur-beta-A (Purine-rich|
           element-binding protein B-A)
          Length = 322

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
 Frame = +2

Query: 5   IGSQTYGSTVEV*QNIRILQIKPSMFN------RAQHKIGG*LGRYSDQVSKLNKHYNIT 166
           +GS  YG        +R+ ++KPS  N      +A  K GG   RYS+++ ++ +     
Sbjct: 238 VGSNKYGVF------LRVSEVKPSYRNSITVPLKAWGKFGGAFCRYSEEMKEIQERQRDK 291

Query: 167 MRSNLPPRPRSR 202
           M     P  R R
Sbjct: 292 MYERRGPGDRER 303


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,175,600
Number of Sequences: 219361
Number of extensions: 826304
Number of successful extensions: 2282
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2266
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)