ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4c15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY337321.1| Triticum aestivum pyridoxal kinase (SOS4) mRNA, c... 781 0.0
2dbj|AK066514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 7e-59
3gb|AY105235.1| Zea mays PCO106437 mRNA sequence 172 9e-40
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
6emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa... 96 2e-16
7gb|BT009172.1| Triticum aestivum clone wl1n.pk0106.e8:fis, full ... 86 2e-13
8ref|NM_123144.2| Arabidopsis thaliana SOS4 (SALT OVERLY SENSITIV... 66 1e-07
9gb|AF404865.2| Arabidopsis thaliana pyridoxal kinase mRNA, compl... 66 1e-07
10gb|BT008815.1| Arabidopsis thaliana At5g37850 mRNA, complete cds 66 1e-07
11gb|AY136333.1| Arabidopsis thaliana pyridoxal kinase-like protei... 66 1e-07
12gb|AY084419.1| Arabidopsis thaliana clone 107973 mRNA, complete ... 66 1e-07
13gb|DQ006813.1| Glycine max pyridoxal kinase mRNA, complete cds 64 6e-07
14gb|BT013971.1| Lycopersicon esculentum clone 133015R, mRNA sequence 54 6e-04
15gb|DQ006812.1| Solanum tuberosum pyridoxal kinase mRNA, complete... 46 0.14
16gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete se... 44 0.54
17gb|AC121804.3| Mus musculus BAC clone RP23-442I5 from chromosome... 42 2.1
18emb|AL645858.5| Human DNA sequence from clone RP11-345D7 on chro... 42 2.1
19gb|AC095060.3| Homo sapiens BAC clone RP11-436F23 from 4, comple... 42 2.1
20gb|AF025656.1|AF025656 Streptomyces albus G HrcA (hrcA) and DnaJ... 42 2.1
21gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.5
22gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosom... 40 8.5
23gb|L05146.3|YSCLTESPO Saccharomyces cerevisiae chromosome I left... 40 8.5
24gb|AC130212.4| Mus musculus BAC clone RP23-461L3 from chromosome... 40 8.5
25gb|AC121810.3| Mus musculus BAC clone RP23-453G13 from chromosom... 40 8.5
26gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 8.5
27gb|AC067717.19| Homo sapiens 3 BAC RP11-484E7 (Roswell Park Canc... 40 8.5
28gb|AC016845.14| Homo sapiens chromosome 11, clone RP11-5E23, com... 40 8.5
29gb|AC011890.4|AC011890 Homo sapiens PAC clone RP4-655L22 from Xq... 40 8.5
30emb|AL845421.9| Zebrafish DNA sequence from clone CH211-199I15 i... 40 8.5
31gb|AC005773.1|AC005773 Homo sapiens chromosome 17, clone hRPK.53... 40 8.5
32gb|AC166752.4| Cavia porcellus, clone Cavia porcellus-25199157I7... 40 8.5
33gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome... 40 8.5
34emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chr... 40 8.5 
>gb|AY337321.1| Triticum aestivum pyridoxal kinase (SOS4) mRNA, complete cds
          Length = 1477

 Score =  781 bits (394), Expect = 0.0
 Identities = 569/624 (91%), Gaps = 13/624 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4    tacataacacatnaataagatgctgtttaatn-ttgtaacaccaacacaacaaagcttca 62
            |||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||
Sbjct: 1394 tacagaacacatcaataagatgctgtttaatcattgtaacaccaacacaacaaagctaca 1335

                                                                        
Query: 63   aagatgcaactgaaccttctgtacaattcagtctcactacaataaataacagtgacaaat 122
            ||||||||||| |||||||||||||||||| ||||||  | | |||||| ||||||| ||
Sbjct: 1334 aagatgcaactaaaccttctgtacaattcattctcacagccacaaataaaagtgacagat 1275

                                                                        
Query: 123  tataacaaaaacatcatggcatatttgctgttttccctaatttggatcctttacgggttt 182
            |||| ||||| ||| ||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1274 tatatcaaaagcatgatgacatatt-gttgttttccctaatttggatcctttacgggttt 1216

                                                                        
Query: 183  gaacctaaggc----tggaaatggctttcccgaaactgaagccagaagccgtgtcagaat 238
            |||||||||||    | |||||||||||||| ||||||||||||||| |||||||   ||
Sbjct: 1215 gaacctaaggcgagctagaaatggctttcccaaaactgaagccagaaaccgtgtcg--at 1158

                                                                        
Query: 239  atgcggtgcacgctgacagtgaagatcccggcatgcttcgaggagaccagaatttgttta 298
            |||||||||| | |||||||||  |||  ||||||||||||||||||||  |||||||||
Sbjct: 1157 atgcggtgcatgttgacagtgacaatcttggcatgcttcgaggagaccaacatttgttta 1098

                                                                        
Query: 299  cagccatccctccttaaactataacagttcgacgaccttaattttgtggcggtgcttgtc 358
            || |||| ||||||||     |||||||| |||| ||| |||||||||| | ||||||||
Sbjct: 1097 caaccattcctcctta-----taacagtttgacggcctcaattttgtggtgatgcttgtc 1043

                                                                        
Query: 359  agaattactatgggatcatttatacttgacggcgttgcacgtaacctgcgggtttctgat 418
            |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1042 agaattactacgggatcatttatacttcacggcgttgcacgtaacctgcgggtttctgat 983

                                                                        
Query: 419  ctcatcctggctctgtatcagtcggatctctaagctgctgcttgatgggtcaaagcctgc 478
            |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 982  ctcatcctggctttgtattaatcggatctctaagctgctgcttgatgggtcaaagcctgc 923

                                                                        
Query: 479  tcttttatagtcttcaactgtcctccttaggagtgcctgcaaactggatactgccagttc 538
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 922  tcttttatagtcttcaactgtccttcttaggagtgcctgcaaactggatactgccagttc 863

                                                                        
Query: 539  cgccgctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagttgt 598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862  cgccgctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagttgt 803

                                    
Query: 599  taaatctccggtccccgtgaaata 622
            ||||||||||||||||||||||||
Sbjct: 802  taaatctccggtccccgtgaaata 779
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>dbj|AK066514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069D01, full
            insert sequence
          Length = 1479

 Score =  236 bits (119), Expect = 7e-59
 Identities = 182/203 (89%)
 Strand = Plus / Minus

                                                                        
Query: 420  tcatcctggctctgtatcagtcggatctctaagctgctgcttgatgggtcaaagcctgct 479
            ||||||||||| || ||||  |||||||||| ||||||| | || |||||||| || |||
Sbjct: 1057 tcatcctggctttgaatcaagcggatctctaggctgctggtggaggggtcaaacccagct 998

                                                                        
Query: 480  cttttatagtcttcaactgtcctccttaggagtgcctgcaaactggatactgccagttcc 539
            |||||||||||||| || || ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 997  cttttatagtcttccacagttctccttaggagtgcctgcaaactggataccgccagttca 938

                                                                        
Query: 540  gccgctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagttgtt 599
            |||||  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 937  gccgccctctcaaggttatcagggtatttattactccatcctagtagaagggcagttgtt 878

                                   
Query: 600  aaatctccggtccccgtgaaata 622
            |||||||| || |||||||||||
Sbjct: 877  aaatctccagtgcccgtgaaata 855
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>gb|AY105235.1| Zea mays PCO106437 mRNA sequence
          Length = 1437

 Score =  172 bits (87), Expect = 9e-40
 Identities = 183/215 (85%)
 Strand = Plus / Minus

                                                                       
Query: 408 gggtttctgatctcatcctggctctgtatcagtcggatctctaagctgctgcttgatggg 467
           ||||||| |||||| |||||||| || ||||  ||||||||| ||||| || | ||||||
Sbjct: 954 gggtttcggatctcgtcctggctttggatcaaccggatctctgagctggtggtcgatggg 895

                                                                       
Query: 468 tcaaagcctgctcttttatagtcttcaactgtcctccttaggagtgcctgcaaactggat 527
           || ||||| ||  ||||||||||||| || || ||  | || ||||||||||||||||| 
Sbjct: 894 tcgaagccggccattttatagtcttccacagttcttttcagaagtgcctgcaaactggaa 835

                                                                       
Query: 528 actgccagttccgccgctttctcaaggttatcagggtatttattgctccatcctagtaga 587
           ||||||||||| || |||||||| ||| ||||||| |||||||| |||||||||||||| 
Sbjct: 834 actgccagttctgctgctttctcgaggctatcaggatatttattactccatcctagtagg 775

                                              
Query: 588 agagcagttgttaaatctccggtccccgtgaaata 622
           ||||||||||| |||||||| || |||||||||||
Sbjct: 774 agagcagttgtcaaatctccagttcccgtgaaata 740
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                            
Query: 420      tcatcctggctctgtatcagtcggatctctaagctgctgcttgatgggtcaaagcctgct 479
                ||||||||||| || ||||  |||||||||| ||||||| | || |||||||| || |||
Sbjct: 25310191 tcatcctggctttgaatcaagcggatctctaggctgctggtggaggggtcaaacccagct 25310132

                                                        
Query: 480      cttttatagtcttcaactgtcctccttaggagtgcctgca 519
                |||||||||||||| || || |||||||||||||||||||
Sbjct: 25310131 cttttatagtcttccacagttctccttaggagtgcctgca 25310092



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                       
Query: 514      cctgcaaactggatactgccagttccgccgctttctcaaggttatcagggtattt 568
                |||||||||||||||| |||||||| |||||  ||||||||||||||||||||||
Sbjct: 25309656 cctgcaaactggataccgccagttcagccgccctctcaaggttatcagggtattt 25309602



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 573      ctccatcctagtagaagagcagttgttaaatctcc 607
                ||||||||||||||||| |||||||||||||||||
Sbjct: 25309473 ctccatcctagtagaagggcagttgttaaatctcc 25309439
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                            
Query: 420      tcatcctggctctgtatcagtcggatctctaagctgctgcttgatgggtcaaagcctgct 479
                ||||||||||| || ||||  |||||||||| ||||||| | || |||||||| || |||
Sbjct: 25238367 tcatcctggctttgaatcaagcggatctctaggctgctggtggaggggtcaaacccagct 25238308

                                                        
Query: 480      cttttatagtcttcaactgtcctccttaggagtgcctgca 519
                |||||||||||||| || || |||||||||||||||||||
Sbjct: 25238307 cttttatagtcttccacagttctccttaggagtgcctgca 25238268



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                       
Query: 514      cctgcaaactggatactgccagttccgccgctttctcaaggttatcagggtattt 568
                |||||||||||||||| |||||||| |||||  ||||||||||||||||||||||
Sbjct: 25237832 cctgcaaactggataccgccagttcagccgccctctcaaggttatcagggtattt 25237778



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 573      ctccatcctagtagaagagcagttgttaaatctcc 607
                ||||||||||||||||| |||||||||||||||||
Sbjct: 25237649 ctccatcctagtagaagggcagttgttaaatctcc 25237615
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>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158927

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                         
Query: 420   tcatcctggctctgtatcagtcggatctctaagctgctgcttgatgggtcaaagcctgct 479
             ||||||||||| || ||||  |||||||||| ||||||| | || |||||||| || |||
Sbjct: 26999 tcatcctggctttgaatcaagcggatctctaggctgctggtggaggggtcaaacccagct 27058

                                                     
Query: 480   cttttatagtcttcaactgtcctccttaggagtgcctgca 519
             |||||||||||||| || || |||||||||||||||||||
Sbjct: 27059 cttttatagtcttccacagttctccttaggagtgcctgca 27098



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 514   cctgcaaactggatactgccagttccgccgctttctcaaggttatcagggtattt 568
             |||||||||||||||| |||||||| |||||  ||||||||||||||||||||||
Sbjct: 27534 cctgcaaactggataccgccagttcagccgccctctcaaggttatcagggtattt 27588



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 573   ctccatcctagtagaagagcagttgttaaatctcc 607
             ||||||||||||||||| |||||||||||||||||
Sbjct: 27717 ctccatcctagtagaagggcagttgttaaatctcc 27751
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>gb|BT009172.1| Triticum aestivum clone wl1n.pk0106.e8:fis, full insert mRNA
           sequence
          Length = 956

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 556 tatcagggtatttattgctccatcctagtagaagagcagttgttaaatctccggtccccg 615
           ||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 955 tatcaggatatttattactccatcctagtaggagagcagttgtcaaatctccagttcccg 896

                  
Query: 616 tgaaata 622
           |||||||
Sbjct: 895 tgaaata 889
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>ref|NM_123144.2| Arabidopsis thaliana SOS4 (SALT OVERLY SENSITIVE 4); kinase
           AT5G37850 (SOS4) mRNA, complete cds
          Length = 1196

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 543 gctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagt 595
           ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 849 gctttgtcaaggttgtcagggtatttattactccaaccaagtagaagagcagt 797
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>gb|AF404865.2| Arabidopsis thaliana pyridoxal kinase mRNA, complete cds
          Length = 930

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 543 gctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagt 595
           ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 761 gctttgtcaaggttgtcagggtatttattactccaaccaagtagaagagcagt 709
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>gb|BT008815.1| Arabidopsis thaliana At5g37850 mRNA, complete cds
          Length = 930

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 543 gctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagt 595
           ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 761 gctttgtcaaggttgtcagggtatttattactccaaccaagtagaagagcagt 709
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>gb|AY136333.1| Arabidopsis thaliana pyridoxal kinase-like protein (At5g37850)
           mRNA, complete cds
          Length = 1135

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 543 gctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagt 595
           ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 849 gctttgtcaaggttgtcagggtatttattactccaaccaagtagaagagcagt 797
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>gb|AY084419.1| Arabidopsis thaliana clone 107973 mRNA, complete sequence
          Length = 1138

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 543 gctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagt 595
           ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 791 gctttgtcaaggttgtcagggtatttattactccaaccaagtagaagagcagt 739
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>gb|DQ006813.1| Glycine max pyridoxal kinase mRNA, complete cds
          Length = 1102

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                       
Query: 512 tgcctgcaaactggatactgccagttccgccgctttctcaaggttatcagggtatttatt 571
           ||||||||| || || ||||| |||||||| ||  |||||||||| || |||||||||||
Sbjct: 907 tgcctgcaagcttgacactgcaagttccgcagcaatctcaaggttgtctgggtatttatt 848

                                   
Query: 572 gctccatcctagtagaagagcagt 595
           |||||| || || ||||| |||||
Sbjct: 847 gctccaaccaagaagaagtgcagt 824
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>gb|BT013971.1| Lycopersicon esculentum clone 133015R, mRNA sequence
          Length = 1334

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 540 gccgctttctcaaggttatcagggtatttattgctccatcctagtagaagagcagttgtt 599
           |||||||| || |||| ||| || |||||||||||||| || || |  | |||||| |||
Sbjct: 941 gccgctttgtcgaggtcatcgggatatttattgctccagccaagcaacaaagcagtcgtt 882

                                  
Query: 600 aaatctccggtccccgtgaaata 622
           |||||||| || |||||||||||
Sbjct: 881 aaatctccagttcccgtgaaata 859
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>gb|DQ006812.1| Solanum tuberosum pyridoxal kinase mRNA, complete cds
          Length = 1339

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 564 tatttattgctccatcctagtagaagagcagttgttaaatctccggtccccgtgaaata 622
           ||||||||||||||||| || |  | |||||| |||||||| || || |||||||||||
Sbjct: 996 tatttattgctccatccaagcaacaaagcagtcgttaaatcccccgttcccgtgaaata 938
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>gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete sequence
          Length = 134674

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 119   aaattataacaaaaacatcatg 140
             ||||||||||||||||||||||
Sbjct: 55732 aaattataacaaaaacatcatg 55753
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>gb|AC121804.3| Mus musculus BAC clone RP23-442I5 from chromosome 12, complete sequence
          Length = 199938

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   ggcatatttgctgttttccct 160
             |||||||||||||||||||||
Sbjct: 55941 ggcatatttgctgttttccct 55961
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>emb|AL645858.5| Human DNA sequence from clone RP11-345D7 on chromosome 1, complete
             sequence
          Length = 30369

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   aataaataacagtgacaaatt 123
             |||||||||||||||||||||
Sbjct: 21488 aataaataacagtgacaaatt 21468
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>gb|AC095060.3| Homo sapiens BAC clone RP11-436F23 from 4, complete sequence
          Length = 111259

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 477   gctcttttatagtcttcaact 497
             |||||||||||||||||||||
Sbjct: 41528 gctcttttatagtcttcaact 41508
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>gb|AF025656.1|AF025656 Streptomyces albus G HrcA (hrcA) and DnaJ (dnaJ2) genes, complete cds
          Length = 2521

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  gcacgctgacagtgaagatcccggc 270
            |||||||||| ||||||||||||||
Sbjct: 1827 gcacgctgacggtgaagatcccggc 1851
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>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete
              sequence
          Length = 1085720

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    aacagttcgacgaccttaat 340
              ||||||||||||||||||||
Sbjct: 621066 aacagttcgacgaccttaat 621085
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>gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosome 15, complete
             sequence
          Length = 205639

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   aaataacagtgacaaattat 125
             ||||||||||||||||||||
Sbjct: 18295 aaataacagtgacaaattat 18276
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>gb|L05146.3|YSCLTESPO Saccharomyces cerevisiae chromosome I left arm sequence
          Length = 29415

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   gttttccctaatttggatcc 171
             ||||||||||||||||||||
Sbjct: 14797 gttttccctaatttggatcc 14816
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>gb|AC130212.4| Mus musculus BAC clone RP23-461L3 from chromosome 15, complete sequence
          Length = 170741

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    aaataacagtgacaaattat 125
              ||||||||||||||||||||
Sbjct: 110798 aaataacagtgacaaattat 110817
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>gb|AC121810.3| Mus musculus BAC clone RP23-453G13 from chromosome 1, complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     acaacaaagcttcaaagatg 68
              ||||||||||||||||||||
Sbjct: 202711 acaacaaagcttcaaagatg 202692
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ttataacaaaaacatcatgg 141
             ||||||||||||||||||||
Sbjct: 89882 ttataacaaaaacatcatgg 89863
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>gb|AC067717.19| Homo sapiens 3 BAC RP11-484E7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 226233

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   gtgacaaattataacaaaaa 133
             ||||||||||||||||||||
Sbjct: 10257 gtgacaaattataacaaaaa 10238
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>gb|AC016845.14| Homo sapiens chromosome 11, clone RP11-5E23, complete sequence
          Length = 167727

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   atatttgctgttttccctaa 162
             ||||||||||||||||||||
Sbjct: 44269 atatttgctgttttccctaa 44288
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>gb|AC011890.4|AC011890 Homo sapiens PAC clone RP4-655L22 from Xq23, complete sequence
          Length = 158907

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 410    gtttctgatctcatcctggc 429
              ||||||||||||||||||||
Sbjct: 106054 gtttctgatctcatcctggc 106035
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>emb|AL845421.9| Zebrafish DNA sequence from clone CH211-199I15 in linkage group 20,
              complete sequence
          Length = 148289

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     caaagatgcaactgaacctt 80
              ||||||||||||||||||||
Sbjct: 104531 caaagatgcaactgaacctt 104550
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>gb|AC005773.1|AC005773 Homo sapiens chromosome 17, clone hRPK.534_P_15, complete sequence
          Length = 99036

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   aataaataacagtgacaaat 122
             ||||||||||||||||||||
Sbjct: 68827 aataaataacagtgacaaat 68846
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>gb|AC166752.4| Cavia porcellus, clone Cavia porcellus-25199157I7, complete sequence
          Length = 38897

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   acaaattataacaaaaacat 136
             ||||||||||||||||||||
Sbjct: 30220 acaaattataacaaaaacat 30201
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>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence
          Length = 209249

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    acaacaaagcttcaaagatg 68
             ||||||||||||||||||||
Sbjct: 60490 acaacaaagcttcaaagatg 60471
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>emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chromosome 4, complete
             sequence
          Length = 207097

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   gctgctgcttgatgggtcaa 471
             ||||||||||||||||||||
Sbjct: 68499 gctgctgcttgatgggtcaa 68480


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,381,204
Number of Sequences: 3902068
Number of extensions: 5381204
Number of successful extensions: 100811
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100694
Number of HSP's gapped (non-prelim): 110
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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