ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3n09 |
|---|---|
| Clone Library Name | barley_pub |
>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 531 Score = 137 bits (344), Expect = 3e-32 Identities = 65/91 (71%), Positives = 79/91 (86%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RARNQLKSS+ LH+DG++ + EDIGRQ L YGRRIP ELFARIDAVD ST++RVAN++I Sbjct: 441 RARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYI 500 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 +D+DIAI+A+GPI+ LPDYN FRRRTY RY Sbjct: 501 YDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 105 bits (261), Expect = 1e-22 Identities = 51/80 (63%), Positives = 63/80 (78%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+N LK+++ L LDGST + EDIGRQ L Y RRIPIPEL ARIDAVD T+RRV ++I Sbjct: 399 RAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYI 458 Query: 387 FDQDIAIAAMGPIKTLPDYN 328 D+ AIAA+GPI+ LPD+N Sbjct: 459 HDKSPAIAALGPIERLPDFN 478
>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 103 bits (258), Expect = 3e-22 Identities = 53/90 (58%), Positives = 65/90 (72%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RARN LK+++ L LDGST + EDIGRQ L Y RRIPIPEL ARIDAV+ TIR V ++I Sbjct: 399 RARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYI 458 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLR 298 +++ AIAA+GPIK LPD+ R LR Sbjct: 459 YNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 488
>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 490 Score = 100 bits (248), Expect = 4e-21 Identities = 48/80 (60%), Positives = 62/80 (77%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+N LK+++ L LDGST + EDIGRQ L Y RRIPIPEL ARIDAV+ IR V ++I Sbjct: 400 RAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYI 459 Query: 387 FDQDIAIAAMGPIKTLPDYN 328 +D+ A+AA+GPI+ LPD+N Sbjct: 460 YDKSPAVAAVGPIEQLPDFN 479
>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 99.8 bits (247), Expect = 5e-21 Identities = 48/80 (60%), Positives = 61/80 (76%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+N LK+++ L LDGST + EDIGRQ L Y RRIPIPEL ARIDAVD +R V ++I Sbjct: 399 RAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYI 458 Query: 387 FDQDIAIAAMGPIKTLPDYN 328 + + AIAA+GPI+ LPD+N Sbjct: 459 YGKSPAIAALGPIERLPDFN 478
>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 489 Score = 99.8 bits (247), Expect = 5e-21 Identities = 49/79 (62%), Positives = 62/79 (78%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RARN LK+++ L LDGST + EDIGRQ L Y RRIPIPEL ARIDAV+ TIR V ++I Sbjct: 399 RARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYI 458 Query: 387 FDQDIAIAAMGPIKTLPDY 331 +++ AIAA+GPI+ LPD+ Sbjct: 459 YNRSPAIAAVGPIEQLPDF 477
>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (BeMPP1) Length = 465 Score = 96.7 bits (239), Expect = 4e-20 Identities = 47/90 (52%), Positives = 64/90 (71%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIF 385 A+ QLK+S+ L LDG+T V E+IGRQ L YGRR+ E+ +DAV ++RVAN FI+ Sbjct: 376 AKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIY 435 Query: 384 DQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 D+D+AI A+GP++ LPDYN R +LRY Sbjct: 436 DRDLAIVAVGPVECLPDYNRIRSAMNLLRY 465
>UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 92.4 bits (228), Expect = 8e-19 Identities = 44/91 (48%), Positives = 62/91 (68%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 R +N L++++ HLDG+T V EDIGR L YGRRIP+ E +RI VD S +R + +++I Sbjct: 390 RGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYI 449 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 +DQ A+A GPI+ LPDYN R + LR+ Sbjct: 450 YDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
>UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/91 (47%), Positives = 60/91 (65%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 R +N L++++ HLDG+T V EDIGR L YGRRIP+ E +RI VD +R V +++ Sbjct: 390 RGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYF 449 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 +DQ A+A GPI+ LPDYN R + LR+ Sbjct: 450 YDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480
>UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 88.6 bits (218), Expect = 1e-17 Identities = 42/91 (46%), Positives = 60/91 (65%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 R +N L++++ HLDG+T V EDIGR L YGRRIP+ E +RI VD +R + +++ Sbjct: 390 RGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYF 449 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 +DQ A+A GPI+ LPDYN R + LR+ Sbjct: 450 YDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 457 Score = 76.6 bits (187), Expect = 4e-14 Identities = 41/91 (45%), Positives = 59/91 (64%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QL++S+ L LD +TA+ EDIGRQ L GRR+ E+ RI + + RVA+ I Sbjct: 367 RAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMI 426 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 +D+DIA++A+G I+ L DYN R M R+ Sbjct: 427 WDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 457
>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (Ubiquinol-cytochrome-c reductase complex core protein I) (EC 1.10.2.2) Length = 476 Score = 76.3 bits (186), Expect = 6e-14 Identities = 43/79 (54%), Positives = 55/79 (69%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QLK+SI L LDG+TAV EDIGRQ + GRR+ E+ IDAV + AN+ I Sbjct: 386 RAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKI 445 Query: 387 FDQDIAIAAMGPIKTLPDY 331 +DQDIAI+A+G I+ L DY Sbjct: 446 WDQDIAISAVGSIEGLFDY 464
>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 466 Score = 75.9 bits (185), Expect = 8e-14 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA++QLK+ + L LDG+TAV EDIGRQ + G+R+ ++ +DAV I+RVA +++ Sbjct: 376 RAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYL 435 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 +D+D A+AA G I L DY R + Y Sbjct: 436 WDKDFALAAFGNIDGLKDYGRIRNDMSSMLY 466
>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 462 Score = 64.3 bits (155), Expect = 2e-10 Identities = 31/85 (36%), Positives = 55/85 (64%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QLK+++ L LDGSTA+VEDIGRQ + G+R+ E+F ++D + I AN + Sbjct: 375 RAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRL 434 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRR 313 ++ +++ A+G T+P+ ++ + Sbjct: 435 QNKPVSMVALGNTSTVPNVSYIEEK 459
>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 482 Score = 59.3 bits (142), Expect = 7e-09 Identities = 30/71 (42%), Positives = 48/71 (67%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+NQLKSS+ ++L+ +ED+GRQ L++GR+IP+ E+ ++I+ + P I RVA I Sbjct: 369 RAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVA-EMI 427 Query: 387 FDQDIAIAAMG 355 F ++ A G Sbjct: 428 FTGNVNNAGNG 438
>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 494 Score = 58.5 bits (140), Expect = 1e-08 Identities = 27/63 (42%), Positives = 39/63 (61%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+NQLK L LDG+T + +DIGRQ L +G R+P+ F ++DA+ + RV R + Sbjct: 386 RAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRVGPRVL 445 Query: 387 FDQ 379 Q Sbjct: 446 LRQ 448
>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 577 Score = 56.2 bits (134), Expect = 6e-08 Identities = 25/60 (41%), Positives = 42/60 (70%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+NQL+SS+ ++L+ +ED+GRQ ++GR+IP+ E+ RI+ + +RRVA R + Sbjct: 470 RAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVV 529
>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) Length = 504 Score = 53.9 bits (128), Expect = 3e-07 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ KS+I ++L+ EDIGRQ L YG R P+ IDAV I V + I Sbjct: 417 RAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLI 476 Query: 387 FDQDIAIAAMGPIKTLPDYN 328 + +A+ G + +LP Y+ Sbjct: 477 -SSPLTMASYGDVLSLPSYD 495
>UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 457 Score = 50.1 bits (118), Expect = 4e-06 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%) Frame = -2 Query: 567 RARNQLKSSI-QLHLDGSTAVVED---IGRQQLIYGRRIPIPELFARIDAVDPSTIRRVA 400 RA++ LK + QL+ G+ V D +G + LI G ++ + E F +IDA+ ++ A Sbjct: 365 RAKSLLKLQLGQLYESGNP--VNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWA 422 Query: 399 NRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 295 + ++DQDIAIA G I+ L DY R M+R+ Sbjct: 423 GKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 457
>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 49.7 bits (117), Expect = 6e-06 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQL-IYGRRIPIPELFARIDAVDPSTIRRVANRF 391 RA+ QL S + ++L+ + ED+GRQ L + R++P EL I V P I+RVA++ Sbjct: 425 RAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP-HELCTLIRNVKPEDIKRVASKM 483 Query: 390 IFDQDIAIAAMGPIKTLPDY 331 + + A+AA+G + LP Y Sbjct: 484 LRGKP-AVAALGDLTDLPTY 502
>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 49.7 bits (117), Expect = 6e-06 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQL-IYGRRIPIPELFARIDAVDPSTIRRVANRF 391 RA+ QL S + ++L+ + ED+GRQ L + R++P EL I V P I+RVA++ Sbjct: 425 RAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP-HELCTLIRNVKPEDIKRVASKM 483 Query: 390 IFDQDIAIAAMGPIKTLPDY 331 + + A+AA+G + LP Y Sbjct: 484 LRGKP-AVAALGDLTDLPTY 502
>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 474 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/78 (37%), Positives = 40/78 (51%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+NQLKSS+ ++L+ VEDIGRQ L +R+ EL I AV + RVA + Sbjct: 368 RAKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALV 427 Query: 387 FDQDIAIAAMGPIKTLPD 334 +A + L D Sbjct: 428 AKPPTMVAVGEDLTKLTD 445
>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 494 Score = 48.1 bits (113), Expect = 2e-05 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQ-QLIYGRRIPIPELFARIDAVDPSTIRRVANRF 391 RA+NQLKSS+ ++L+ +ED+GRQ Q G I E+ +IDA+ PS + RVA R Sbjct: 395 RAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRV 454 Query: 390 I 388 + Sbjct: 455 L 455
>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 525 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QL S + ++L+ + ED+GRQ L R EL I V P ++RVA++ + Sbjct: 426 RAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 485 Query: 387 FDQDIAIAAMGPIKTLPDY 331 + A+AA+G + LP Y Sbjct: 486 RGKP-AVAALGDLTDLPTY 503
>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 525 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QL S + ++L+ + ED+GRQ L R EL I V P ++RVA++ + Sbjct: 426 RAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 485 Query: 387 FDQDIAIAAMGPIKTLPDY 331 + A+AA+G + LP Y Sbjct: 486 RGKP-AVAALGDLTDLPTY 503
>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit| 2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2) Length = 499 Score = 46.2 bits (108), Expect = 6e-05 Identities = 24/85 (28%), Positives = 43/85 (50%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ KS+I ++L+ EDIGRQ L YG R P+ + +D + I ++ + Sbjct: 414 RAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSK-V 472 Query: 387 FDQDIAIAAMGPIKTLPDYNWFRRR 313 + + +A G + +P Y+ +R Sbjct: 473 ITKPLTMATFGDVLNVPSYDSVSKR 497
>Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4.99.-)| Length = 459 Score = 46.2 bits (108), Expect = 6e-05 Identities = 24/74 (32%), Positives = 46/74 (62%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA QL+ S L L+ + A++ IG+ +L +G ++ + ++ ARI +V P +R VA R + Sbjct: 375 RAVGQLQGSTVLGLEDTGALMNRIGKSELCWGEQMSVDDMLARIASVTPDDVRAVA-RDV 433 Query: 387 FDQDIAIAAMGPIK 346 + +++ +GP+K Sbjct: 434 LGRRPSLSVIGPLK 447
>YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III| Length = 471 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/78 (26%), Positives = 42/78 (53%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIF 385 A+NQ ++++ +L+ +T ++ L G + EL A+I VD +R +R ++ Sbjct: 382 AKNQFRTNLYQNLETNTQKAGFNAKELLYTGNLRQLSELEAQIQKVDAGAVREAISRHVY 441 Query: 384 DQDIAIAAMGPIKTLPDY 331 D+D+A +G + P+Y Sbjct: 442 DRDLAAVGVGRTEAFPNY 459
>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit| 1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1) Length = 503 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVAN--R 394 RA+ KS++ ++L+ EDIGRQ L YG R P+ + + +VD T++ +A+ Sbjct: 418 RAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQF---LKSVDQLTLKDIADFTS 474 Query: 393 FIFDQDIAIAAMGPIKTLPDYN 328 + + + + + G + +P Y+ Sbjct: 475 KVISKPLTMGSFGDVLAVPSYD 496
>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 452 Score = 38.5 bits (88), Expect = 0.013 Identities = 18/59 (30%), Positives = 34/59 (57%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 A+N+LK+ + ++ S + +IG Q L G +P P + +IDAV + + + A +F+ Sbjct: 373 AKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFV 431
>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)| Length = 412 Score = 37.4 bits (85), Expect = 0.030 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QL+S++Q+ + +T E+IG+ ++G+ I E+ I ++ I AN+ I Sbjct: 336 RAKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANK-I 394 Query: 387 FDQDIAIAAMGP 352 F A +GP Sbjct: 395 FSGTTTSAIIGP 406
>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)| Length = 412 Score = 37.0 bits (84), Expect = 0.039 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -2 Query: 567 RARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFI 388 RA+ QL+S++Q+ + +T E+IG+ ++G+ I E+ I + I AN+ I Sbjct: 336 RAKMQLRSNLQMAQEQNTYKSEEIGKNYSVFGKYILPEEIIEIITNIRADDIINTANK-I 394 Query: 387 FDQDIAIAAMGP 352 F +A +GP Sbjct: 395 FSGTTTLAIIGP 406
>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/76 (26%), Positives = 41/76 (53%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIF 385 A+N+LK+ + ++ S + +IG Q L G +P + +ID+V + + + A +F+ Sbjct: 374 AKNKLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVS 433 Query: 384 DQDIAIAAMGPIKTLP 337 + ++AA G + P Sbjct: 434 GKK-SMAASGNLGHTP 448
>Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)| Length = 445 Score = 34.7 bits (78), Expect = 0.19 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIF 385 A+ L+ I L L+ S + + +GR +L YG+ I +ID V + +A++ + Sbjct: 360 AKGSLRGGIILGLEDSNSWMSRLGRSELNYGKYRGIEHTLQQIDEVTVEQVNALAHQ-LL 418 Query: 384 DQDIAIAAMGPI---KTLP 337 ++ A +GP KTLP Sbjct: 419 NKRYGAAVLGPYASKKTLP 437
>Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4.99.-)| Length = 438 Score = 33.5 bits (75), Expect = 0.43 Identities = 19/71 (26%), Positives = 35/71 (49%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIF 385 A+ L+ + L L+ S++ + +GR +L YG+ I +I+ V + VA R + Sbjct: 353 AKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVA-RHLL 411 Query: 384 DQDIAIAAMGP 352 + A +GP Sbjct: 412 SRRYGAAVLGP 422
>Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (EC 3.4.99.-)| Length = 438 Score = 33.5 bits (75), Expect = 0.43 Identities = 19/71 (26%), Positives = 35/71 (49%) Frame = -2 Query: 564 ARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRVANRFIF 385 A+ L+ + L L+ S++ + +GR +L YG+ I +I+ V + VA R + Sbjct: 353 AKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVA-RHLL 411 Query: 384 DQDIAIAAMGP 352 + A +GP Sbjct: 412 SRRYGAAVLGP 422
>YNS2_YEAST (P53877) Hypothetical 61.8 kDa Trp-Asp repeats-containing protein| in NPR1-RPS3 intergenic region Length = 555 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 14/73 (19%) Frame = +1 Query: 382 VKDEAVCNTPDSAGINCIYSRK--KLGNRNST------------AIDELLTSNILNNSSG 519 +K A+ N SAG+N + + L RNS A+ +L+ N+LN++ Sbjct: 289 LKGNAIVNLLQSAGVNTVQKGRVFSLVQRNSLTGGENEDLDALYAMGQLVCENVLNSNVS 348 Query: 520 AIKV*LDGRFQLI 558 +++ +DG LI Sbjct: 349 CLEISMDGTLLLI 361
>TR95_MOUSE (Q6PGF3) Thyroid hormone receptor-associated protein complex 95 kDa| component (Trap95) (Thyroid hormone receptor-associated protein 5) (Vitamin D3 receptor-interacting protein complex component DRIP92) Length = 828 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -2 Query: 195 YVPKWRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSI 49 YV +W + + CP LP A SC+ A +TD+ DD +L+ I Sbjct: 5 YVCEWEKWAKSTY-CPSLPLACAWSCRNLTAFTTDLRNDDQDLTHMIHI 52
>OR10A_DROME (Q9VYZ1) Putative odorant receptor 10a| Length = 406 Score = 29.6 bits (65), Expect = 6.2 Identities = 23/56 (41%), Positives = 28/56 (50%) Frame = +3 Query: 222 YTDAKTSNHLAFAXCKHGTLLVESSNGACRSCV*TSCSLEES*LVPWQRWQYPGQR 389 YT A S L + C GTL+ ESS G CR+ SC PWQ ++ P QR Sbjct: 318 YTVAALSQLLVY--CYGGTLVAESSTGLCRAMF--SC--------PWQLFK-PKQR 360
>SPG21_RAT (Q5XIC4) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 261 Score = 29.6 bits (65), Expect = 6.2 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_PONPY (Q5RES2) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 308 Score = 29.6 bits (65), Expect = 6.2 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_MOUSE (Q9CQC8) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) (Acid cluster protein 33) Length = 308 Score = 29.6 bits (65), Expect = 6.2 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_HUMAN (Q9NZD8) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein) (Acid cluster protein 33) Length = 308 Score = 29.6 bits (65), Expect = 6.2 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_BOVIN (Q8MJJ1) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 308 Score = 29.6 bits (65), Expect = 6.2 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)| Length = 470 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = -2 Query: 183 WRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSIFVFGYCC 28 WRN L L F C L F + A +++++Y +D+L + ++FG CC Sbjct: 132 WRN-LGLIFNCTFLLFGSVIQLI---ACASNIYYINDKLDKRTWTYIFGACC 179
>SPG21_XENLA (Q5FVD6) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 310 Score = 29.3 bits (64), Expect = 8.1 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG IK PDYNWFR Sbjct: 1 MGAIKISPDYNWFR 14
>SPG21_MACFA (Q4R5H6) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 308 Score = 29.3 bits (64), Expect = 8.1 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -2 Query: 360 MGPIKTLPDYNWFR 319 MG +K PDYNWFR Sbjct: 1 MGEVKVSPDYNWFR 14 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,245,562 Number of Sequences: 219361 Number of extensions: 1757417 Number of successful extensions: 4762 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4756 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
