ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_188559.1| Oryza sativa (japonica cultivar-group), predic... 373 e-100
2dbj|AK059314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 373 e-100
3gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, comple... 264 4e-67
4gb|AY103934.1| Zea mays PCO140136 mRNA sequence 262 1e-66
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
6dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
7dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
8gb|AY112460.1| Zea mays CL9078_1 mRNA sequence 84 7e-13
9ref|NM_191117.1| Oryza sativa (japonica cultivar-group), predic... 64 7e-07
10dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
11dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
12dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
13ref|NM_123524.3| Arabidopsis thaliana unknown protein AT5G41600 ... 46 0.16
14gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete se... 46 0.16
15gb|AY150449.1| Arabidopsis thaliana unknown protein (At5g41600) ... 46 0.16
16gb|AY035169.1| Arabidopsis thaliana unknown protein (At5g41600) ... 46 0.16
17gb|AY057638.1| Arabidopsis thaliana AT5g41600/MBK23_13 mRNA, com... 46 0.16
18dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.16
19emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3... 44 0.65
20gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chrom... 42 2.5
21emb|AL450324.10| Human DNA sequence from clone RP11-307F22 on ch... 42 2.5
22gb|AC006649.1| Caenorhabditis elegans fosmid H01M10, complete se... 42 2.5
23gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chrom... 42 2.5
24gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromo... 42 2.5
25gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, comple... 42 2.5
26dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5

>ref|NM_188559.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 840

 Score =  373 bits (188), Expect = e-100
 Identities = 350/404 (86%)
 Strand = Plus / Minus

                                                                       
Query: 332 ctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatcaaa 391
           ||||| |||||||||||||||||||||||| || ||||| ||||| ||||| ||||| | 
Sbjct: 840 ctagtgcttcttgtctttcaaggggccccttggtactttactcaggaccttagcatcgag 781

                                                                       
Query: 392 cacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctgatc 451
           |||||||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||
Sbjct: 780 cacagcatactgtttcttaatctcaacccaccccttctcaccatatgagtcaatctgatc 721

                                                                       
Query: 452 ctcatacttctcgtagattactggaactgtgtgaagaaccacaaaaacaatgtagaacag 511
            ||||||||||| || |  | ||| |||||||| || |||||||| ||||| || | || 
Sbjct: 720 ttcatacttctcatacagaattgggactgtgtgcagcaccacaaacacaatataaaccaa 661

                                                                       
Query: 512 tgtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcacaat 571
            ||||||||||||||||| || |||||||  ||||||| ||| || ||||||||||||||
Sbjct: 660 ggtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcacaat 601

                                                                       
Query: 572 aaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggctctgtt 631
           |||||||||||| ||||| || |||||||||||||||||||| || || ||||| |||||
Sbjct: 600 aaggaacttcttgatgtcccggccaagagcaatctgacgaagattggcaaaggccctgtt 541

                                                                       
Query: 632 gatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatcacctc 691
           |||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 540 gatctcataacgtgtagatagagcaatgttgacaaccaaatcttctggaataatcacctc 481

                                                       
Query: 692 gggaatccttgggggagacttgttgatgaatgacgaggcattag 735
            || ||||  |||||||||||||| || ||||| ||||||||||
Sbjct: 480 tgggatccgcgggggagacttgttaataaatgatgaggcattag 437



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>dbj|AK059314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G12, full
           insert sequence
          Length = 834

 Score =  373 bits (188), Expect = e-100
 Identities = 350/404 (86%)
 Strand = Plus / Minus

                                                                       
Query: 332 ctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatcaaa 391
           ||||| |||||||||||||||||||||||| || ||||| ||||| ||||| ||||| | 
Sbjct: 539 ctagtgcttcttgtctttcaaggggccccttggtactttactcaggaccttagcatcgag 480

                                                                       
Query: 392 cacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctgatc 451
           |||||||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||
Sbjct: 479 cacagcatactgtttcttaatctcaacccaccccttctcaccatatgagtcaatctgatc 420

                                                                       
Query: 452 ctcatacttctcgtagattactggaactgtgtgaagaaccacaaaaacaatgtagaacag 511
            ||||||||||| || |  | ||| |||||||| || |||||||| ||||| || | || 
Sbjct: 419 ttcatacttctcatacagaattgggactgtgtgcagcaccacaaacacaatataaaccaa 360

                                                                       
Query: 512 tgtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcacaat 571
            ||||||||||||||||| || |||||||  ||||||| ||| || ||||||||||||||
Sbjct: 359 ggtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcacaat 300

                                                                       
Query: 572 aaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggctctgtt 631
           |||||||||||| ||||| || |||||||||||||||||||| || || ||||| |||||
Sbjct: 299 aaggaacttcttgatgtcccggccaagagcaatctgacgaagattggcaaaggccctgtt 240

                                                                       
Query: 632 gatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatcacctc 691
           |||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 239 gatctcataacgtgtagatagagcaatgttgacaaccaaatcttctggaataatcacctc 180

                                                       
Query: 692 gggaatccttgggggagacttgttgatgaatgacgaggcattag 735
            || ||||  |||||||||||||| || ||||| ||||||||||
Sbjct: 179 tgggatccgcgggggagacttgttaataaatgatgaggcattag 136



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 95  catgcgacatttaacagatcaaaaatcaaacag 127
           |||||||||| | ||||||||||||||||||||
Sbjct: 756 catgcgacatcttacagatcaaaaatcaaacag 724



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>gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, complete sequence
          Length = 1197

 Score =  264 bits (133), Expect = 4e-67
 Identities = 322/385 (83%)
 Strand = Plus / Plus

                                                                       
Query: 330 ttctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatca 389
           ||||||| |||||||||||||  ||| ||||| || |||||||||||||||||  |||||
Sbjct: 312 ttctagtgcttcttgtctttcgcgggaccccttggtactttgctcagaaccttctcatca 371

                                                                       
Query: 390 aacacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctga 449
           ||||| || ||||| |||||||  ||||||||||| ||||| ||||| |  |||||||||
Sbjct: 372 aacacggcgtactgcttcttaatttcaatccaccctttctcgccatacgagtcaatctga 431

                                                                       
Query: 450 tcctcatacttctcgtagattactggaactgtgtgaagaaccacaaaaacaatgtagaac 509
           ||||| |||||||| || |  || || |||||||| || |||||||| |||||||| | |
Sbjct: 432 tcctcgtacttctcatacaggacaggtactgtgtgcagcaccacaaagacaatgtaaacc 491

                                                                       
Query: 510 agtgtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcaca 569
           |  | ||||||||||||||| || |||||||  ||||||| ||| |  |||||||| || 
Sbjct: 492 aaggacaagaagttgcagcagcttccaagaacagaaagcaaccaaaacccagcaataacc 551

                                                                       
Query: 570 ataaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggctctg 629
           || |||||||||||||| || || |||||||||||||| || || || || ||||| |||
Sbjct: 552 attaggaacttctttatatcccggccaagagcaatctggcggagattggcaaaggccctg 611

                                                                       
Query: 630 ttgatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatcacc 689
           |||||||||| ||| || || ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 612 ttgatctcataacgagtggatagcgcaatgttgacaactaaatcttcaggaatgaccacc 671

                                    
Query: 690 tcgggaatccttgggggagacttgt 714
           || || ||| ||||||||| |||||
Sbjct: 672 tctgggatctttgggggagccttgt 696



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>gb|AY103934.1| Zea mays PCO140136 mRNA sequence
          Length = 1116

 Score =  262 bits (132), Expect = 1e-66
 Identities = 321/384 (83%)
 Strand = Plus / Minus

                                                                       
Query: 331 tctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatcaa 390
           |||||| |||||||||||||   || ||||| || |||||||||||||||||  |||| |
Sbjct: 907 tctagtgcttcttgtctttcgcaggacccctgggtactttgctcagaaccttctcatcga 848

                                                                       
Query: 391 acacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctgat 450
           |||| |||||||| |||||||  |||| |||||||||||| ||||| |  ||||||||||
Sbjct: 847 acacggcatactgcttcttaatttcaacccaccccttctcgccatacgagtcaatctgat 788

                                                                       
Query: 451 cctcatacttctcgtagattactggaactgtgtgaagaaccacaaaaacaatgtagaaca 510
           |||| ||||||||||| |  || || |||||||| || |||||||| |||||||| |  |
Sbjct: 787 cctcgtacttctcgtacaggacaggtactgtgtgcagcaccacaaagacaatgtaaacta 728

                                                                       
Query: 511 gtgtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcacaa 570
             ||||||||||||||||| || |||||||  ||||||| ||| |  |||||||| || |
Sbjct: 727 aggtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaacccagcaataacca 668

                                                                       
Query: 571 taaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggctctgt 630
           | ||||||||||||| ||| || |||||||||||||| || || || || ||||||||||
Sbjct: 667 ttaggaacttctttaggtcccggccaagagcaatctggcggagattggcaaaggctctgt 608

                                                                       
Query: 631 tgatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatcacct 690
           ||||||| | ||| || || ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 607 tgatctcgtaacgagtggatagcgcaatgttgacaactaaatcttcaggaatgatcacct 548

                                   
Query: 691 cgggaatccttgggggagacttgt 714
           | || ||| |||| |||| |||||
Sbjct: 547 ctgggatctttggtggagccttgt 524



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 2e-35
 Identities = 128/144 (88%)
 Strand = Plus / Minus

                                                                           
Query: 567     acaataaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggct 626
               ||||||||||||||||| ||||| || |||||||||||||||||||| || || ||||| 
Sbjct: 6968367 acaataaggaacttcttgatgtcccggccaagagcaatctgacgaagattggcaaaggcc 6968308

                                                                           
Query: 627     ctgttgatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatc 686
               ||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct: 6968307 ctgttgatctcataacgtgtagatagagcaatgttgacaaccaaatcttctggaataatc 6968248

                                       
Query: 687     acctcgggaatccttgggggagac 710
               ||||| || ||||  |||||||||
Sbjct: 6968247 acctctgggatccgcgggggagac 6968224



 Score =  153 bits (77), Expect = 1e-33
 Identities = 143/165 (86%)
 Strand = Plus / Minus

                                                                           
Query: 332     ctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatcaaa 391
               ||||| |||||||||||||||||||||||| || ||||| ||||| ||||| ||||| | 
Sbjct: 6968783 ctagtgcttcttgtctttcaaggggccccttggtactttactcaggaccttagcatcgag 6968724

                                                                           
Query: 392     cacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctgatc 451
               |||||||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||
Sbjct: 6968723 cacagcatactgtttcttaatctcaacccaccccttctcaccatatgagtcaatctgatc 6968664

                                                            
Query: 452     ctcatacttctcgtagattactggaactgtgtgaagaaccacaaa 496
                ||||||||||| || |  | ||| |||||||| || ||||||||
Sbjct: 6968663 ttcatacttctcatacagaattgggactgtgtgcagcaccacaaa 6968619



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                       
Query: 513     gtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcac 568
               ||||||||||||||||| || |||||||  ||||||| ||| || |||||||||||
Sbjct: 6968503 gtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcac 6968448



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 95      catgcgacatttaacagatcaaaaatcaaacag 127
               |||||||||| | ||||||||||||||||||||
Sbjct: 6969000 catgcgacatcttacagatcaaaaatcaaacag 6968968



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 51      ttgcagcaatgcaagtagcaa 71
               |||||||||||||||||||||
Sbjct: 2168422 ttgcagcaatgcaagtagcaa 2168442



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>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492F05
          Length = 159242

 Score =  159 bits (80), Expect = 2e-35
 Identities = 128/144 (88%)
 Strand = Plus / Minus

                                                                          
Query: 567    acaataaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggct 626
              ||||||||||||||||| ||||| || |||||||||||||||||||| || || ||||| 
Sbjct: 136091 acaataaggaacttcttgatgtcccggccaagagcaatctgacgaagattggcaaaggcc 136032

                                                                          
Query: 627    ctgttgatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatc 686
              ||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct: 136031 ctgttgatctcataacgtgtagatagagcaatgttgacaaccaaatcttctggaataatc 135972

                                      
Query: 687    acctcgggaatccttgggggagac 710
              ||||| || ||||  |||||||||
Sbjct: 135971 acctctgggatccgcgggggagac 135948



 Score =  153 bits (77), Expect = 1e-33
 Identities = 143/165 (86%)
 Strand = Plus / Minus

                                                                          
Query: 332    ctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatcaaa 391
              ||||| |||||||||||||||||||||||| || ||||| ||||| ||||| ||||| | 
Sbjct: 136507 ctagtgcttcttgtctttcaaggggccccttggtactttactcaggaccttagcatcgag 136448

                                                                          
Query: 392    cacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctgatc 451
              |||||||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||
Sbjct: 136447 cacagcatactgtttcttaatctcaacccaccccttctcaccatatgagtcaatctgatc 136388

                                                           
Query: 452    ctcatacttctcgtagattactggaactgtgtgaagaaccacaaa 496
               ||||||||||| || |  | ||| |||||||| || ||||||||
Sbjct: 136387 ttcatacttctcatacagaattgggactgtgtgcagcaccacaaa 136343



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 513    gtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcac 568
              ||||||||||||||||| || |||||||  ||||||| ||| || |||||||||||
Sbjct: 136227 gtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcac 136172



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 95     catgcgacatttaacagatcaaaaatcaaacag 127
              |||||||||| | ||||||||||||||||||||
Sbjct: 136724 catgcgacatcttacagatcaaaaatcaaacag 136692



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>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443E07
          Length = 159440

 Score =  159 bits (80), Expect = 2e-35
 Identities = 128/144 (88%)
 Strand = Plus / Minus

                                                                         
Query: 567   acaataaggaacttctttatgtcacgcccaagagcaatctgacgaaggtttgcgaaggct 626
             ||||||||||||||||| ||||| || |||||||||||||||||||| || || ||||| 
Sbjct: 90185 acaataaggaacttcttgatgtcccggccaagagcaatctgacgaagattggcaaaggcc 90126

                                                                         
Query: 627   ctgttgatctcatgacgtgtagagagcgcaatgttgacaaccaaatcttcaggaatgatc 686
             ||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct: 90125 ctgttgatctcataacgtgtagatagagcaatgttgacaaccaaatcttctggaataatc 90066

                                     
Query: 687   acctcgggaatccttgggggagac 710
             ||||| || ||||  |||||||||
Sbjct: 90065 acctctgggatccgcgggggagac 90042



 Score =  153 bits (77), Expect = 1e-33
 Identities = 143/165 (86%)
 Strand = Plus / Minus

                                                                         
Query: 332   ctagttcttcttgtctttcaaggggcccctcggcactttgctcagaaccttggcatcaaa 391
             ||||| |||||||||||||||||||||||| || ||||| ||||| ||||| ||||| | 
Sbjct: 90601 ctagtgcttcttgtctttcaaggggccccttggtactttactcaggaccttagcatcgag 90542

                                                                         
Query: 392   cacagcatactgtttcttaacctcaatccaccccttctcaccataggtatcaatctgatc 451
             |||||||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||
Sbjct: 90541 cacagcatactgtttcttaatctcaacccaccccttctcaccatatgagtcaatctgatc 90482

                                                          
Query: 452   ctcatacttctcgtagattactggaactgtgtgaagaaccacaaa 496
              ||||||||||| || |  | ||| |||||||| || ||||||||
Sbjct: 90481 ttcatacttctcatacagaattgggactgtgtgcagcaccacaaa 90437



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 513   gtcaagaagttgcagcaactcccaagaatggaaagcagccatagaccagcaatcac 568
             ||||||||||||||||| || |||||||  ||||||| ||| || |||||||||||
Sbjct: 90321 gtcaagaagttgcagcagcttccaagaacagaaagcaaccaaaggccagcaatcac 90266



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 95    catgcgacatttaacagatcaaaaatcaaacag 127
             |||||||||| | ||||||||||||||||||||
Sbjct: 90818 catgcgacatcttacagatcaaaaatcaaacag 90786



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>gb|AY112460.1| Zea mays CL9078_1 mRNA sequence
          Length = 686

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 490 ccacaaaaacaatgtagaacagtgtcaagaagttgcagcaactcccaagaatggaaagca 549
           ||||||| ||||| ||||||||||||| |||||||||||| ||||| ||||  ||||| |
Sbjct: 476 ccacaaagacaatatagaacagtgtcaggaagttgcagcagctcccgagaactgaaagaa 535

                                             
Query: 550 gccatagaccagcaatcacaataaggaacttctt 583
           |||| ||||| ||||| ||||| ||||| |||||
Sbjct: 536 gccagagacctgcaataacaattaggaatttctt 569



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>ref|NM_191117.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 128/160 (80%)
 Strand = Plus / Minus

                                                                       
Query: 424 ccttctcaccataggtatcaatctgatcctcatacttctcgtagattactggaactgtgt 483
           ||||||||||| | | ||||| ||  |||||||||||||| || | |||||| || ||||
Sbjct: 670 ccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtactggcacagtgt 611

                                                                       
Query: 484 gaagaaccacaaaaacaatgtagaacagtgtcaagaagttgcagcaactcccaagaatgg 543
             ||  |||||||||| ||||||||||  ||||| ||||| ||||  || |||||||  |
Sbjct: 610 agagcgccacaaaaactatgtagaacaaagtcaaaaagttacagctgctaccaagaactg 551

                                                   
Query: 544 aaagcagccatagaccagcaatcacaataaggaacttctt 583
           | || | ||| || ||||| |||||||| |||||||||||
Sbjct: 550 acagaatccagagtccagcgatcacaatgaggaacttctt 511



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>dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G09, full
           insert sequence
          Length = 1325

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 128/160 (80%)
 Strand = Plus / Minus

                                                                       
Query: 424 ccttctcaccataggtatcaatctgatcctcatacttctcgtagattactggaactgtgt 483
           ||||||||||| | | ||||| ||  |||||||||||||| || | |||||| || ||||
Sbjct: 804 ccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtactggcacagtgt 745

                                                                       
Query: 484 gaagaaccacaaaaacaatgtagaacagtgtcaagaagttgcagcaactcccaagaatgg 543
             ||  |||||||||| ||||||||||  ||||| ||||| ||||  || |||||||  |
Sbjct: 744 agagcgccacaaaaactatgtagaacaaagtcaaaaagttacagctgctaccaagaactg 685

                                                   
Query: 544 aaagcagccatagaccagcaatcacaataaggaacttctt 583
           | || | ||| || ||||| |||||||| |||||||||||
Sbjct: 684 acagaatccagagtccagcgatcacaatgaggaacttctt 645



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>dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H02, full
           insert sequence
          Length = 1181

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 128/160 (80%)
 Strand = Plus / Minus

                                                                       
Query: 424 ccttctcaccataggtatcaatctgatcctcatacttctcgtagattactggaactgtgt 483
           ||||||||||| | | ||||| ||  |||||||||||||| || | |||||| || ||||
Sbjct: 795 ccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtactggcacagtgt 736

                                                                       
Query: 484 gaagaaccacaaaaacaatgtagaacagtgtcaagaagttgcagcaactcccaagaatgg 543
             ||  |||||||||| ||||||||||  ||||| ||||| ||||  || |||||||  |
Sbjct: 735 agagcgccacaaaaactatgtagaacaaagtcaaaaagttacagctgctaccaagaactg 676

                                                   
Query: 544 aaagcagccatagaccagcaatcacaataaggaacttctt 583
           | || | ||| || ||||| |||||||| |||||||||||
Sbjct: 675 acagaatccagagtccagcgatcacaatgaggaacttctt 636



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>dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H05, full
           insert sequence
          Length = 731

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 128/160 (80%)
 Strand = Plus / Minus

                                                                       
Query: 424 ccttctcaccataggtatcaatctgatcctcatacttctcgtagattactggaactgtgt 483
           ||||||||||| | | ||||| ||  |||||||||||||| || | |||||| || ||||
Sbjct: 315 ccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtactggcacagtgt 256

                                                                       
Query: 484 gaagaaccacaaaaacaatgtagaacagtgtcaagaagttgcagcaactcccaagaatgg 543
             ||  |||||||||| ||||||||||  ||||| ||||| ||||  || |||||||  |
Sbjct: 255 agagcgccacaaaaactatgtagaacaaagtcaaaaagttacagctgctaccaagaactg 196

                                                   
Query: 544 aaagcagccatagaccagcaatcacaataaggaacttctt 583
           | || | ||| || ||||| |||||||| |||||||||||
Sbjct: 195 acagaatccagagtccagcgatcacaatgaggaacttctt 156



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>ref|NM_123524.3| Arabidopsis thaliana unknown protein AT5G41600 mRNA, complete cds
          Length = 1095

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 502 tgtagaacagtgtcaagaagttgcagcaactcccaagaatgga 544
           ||||||||| ||||||||||||| |||| || |||| ||||||
Sbjct: 692 tgtagaacaatgtcaagaagttgtagcagctgccaataatgga 650



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>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence
          Length = 89884

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 371   gctcagaaccttggcatcaaacacagcatactgtttctt 409
             ||||| |||||| ||||||| ||| ||||||||||||||
Sbjct: 69135 gctcaaaaccttagcatcaagcactgcatactgtttctt 69097



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>gb|AY150449.1| Arabidopsis thaliana unknown protein (At5g41600) mRNA, complete cds
          Length = 805

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 502 tgtagaacagtgtcaagaagttgcagcaactcccaagaatgga 544
           ||||||||| ||||||||||||| |||| || |||| ||||||
Sbjct: 592 tgtagaacaatgtcaagaagttgtagcagctgccaataatgga 550



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>gb|AY035169.1| Arabidopsis thaliana unknown protein (At5g41600) mRNA, complete cds
          Length = 1061

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 502 tgtagaacagtgtcaagaagttgcagcaactcccaagaatgga 544
           ||||||||| ||||||||||||| |||| || |||| ||||||
Sbjct: 646 tgtagaacaatgtcaagaagttgtagcagctgccaataatgga 604



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>gb|AY057638.1| Arabidopsis thaliana AT5g41600/MBK23_13 mRNA, complete cds
          Length = 1103

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 502 tgtagaacagtgtcaagaagttgcagcaactcccaagaatgga 544
           ||||||||| ||||||||||||| |||| || |||| ||||||
Sbjct: 692 tgtagaacaatgtcaagaagttgtagcagctgccaataatgga 650



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>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23
          Length = 79837

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 502   tgtagaacagtgtcaagaagttgcagcaactcccaagaatgga 544
             ||||||||| ||||||||||||| |||| || |||| ||||||
Sbjct: 32156 tgtagaacaatgtcaagaagttgtagcagctgccaataatgga 32114



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>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE
          Length = 211224

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 439   tatcaatctgatcctcatacttctcgtaga 468
             ||||||||||||| |||||||| |||||||
Sbjct: 70155 tatcaatctgatcgtcatacttttcgtaga 70126



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>gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chromosome 6, complete
             sequence
          Length = 190731

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 564   atcacaataaggaacttcttt 584
             |||||||||||||||||||||
Sbjct: 79300 atcacaataaggaacttcttt 79280



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>emb|AL450324.10| Human DNA sequence from clone RP11-307F22 on chromosome 6, complete
             sequence
          Length = 101846

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 564   atcacaataaggaacttcttt 584
             |||||||||||||||||||||
Sbjct: 97553 atcacaataaggaacttcttt 97533



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>gb|AC006649.1| Caenorhabditis elegans fosmid H01M10, complete sequence
          Length = 14078

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 22   gagttgataaacatcatcaat 42
            |||||||||||||||||||||
Sbjct: 8660 gagttgataaacatcatcaat 8680



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>gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chromosome 6, complete
             sequence
          Length = 173865

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 564   atcacaataaggaacttcttt 584
             |||||||||||||||||||||
Sbjct: 39615 atcacaataaggaacttcttt 39595



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>gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromosome 6, complete
              sequence
          Length = 197430

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 564    atcacaataaggaacttcttt 584
              |||||||||||||||||||||
Sbjct: 111895 atcacaataaggaacttcttt 111875



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>gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, complete sequence
          Length = 166305

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    gtgctgcctctgcattactgt 164
              |||||||||||||||||||||
Sbjct: 126348 gtgctgcctctgcattactgt 126368



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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480E02
          Length = 141862

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    ttgcagcaatgcaagtagcaa 71
             |||||||||||||||||||||
Sbjct: 89534 ttgcagcaatgcaagtagcaa 89554


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,997,629
Number of Sequences: 3902068
Number of extensions: 5997629
Number of successful extensions: 107129
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107019
Number of HSP's gapped (non-prelim): 109
length of query: 735
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 712
effective length of database: 17,143,297,704
effective search space: 12206027965248
effective search space used: 12206027965248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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