ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC042934.1| Xenopus laevis hypothetical protein MGC53335, mRN... 264 7e-68
2gb|L38595.1|XELMLC1F Xenopus laevis MLC1f/3f mRNA, complete cds 264 7e-68
3gb|BC061302.1| Xenopus tropicalis hypothetical protein MGC75774,... 133 2e-28
4ref|NM_203623.1| Xenopus tropicalis hypothetical protein MGC7577... 133 2e-28
5emb|CR760864.2| Xenopus tropicalis finished cDNA, clone TTpA003e07 133 2e-28
6emb|CR926445.2| Xenopus tropicalis finished cDNA, clone TTpA007h22 133 2e-28
7gb|BC089727.1| Xenopus tropicalis hypothetical protein MGC75774,... 133 2e-28
8emb|AJ009308.1|XLAJ9308 Xenopus laevis cDNA clone 29G3-1 117 1e-23
9gb|BC041529.1| Xenopus laevis myosin light chain, alkali, fast s... 101 6e-19
10gb|L38596.1|XELMLC1A Xenopus laevis MLC1 mRNA, complete cds 94 1e-16
11gb|AC169502.1| Mus musculus BAC clone RP24-409G12 from chromosom... 40 1.9
12gb|AC007462.3| Homo sapiens BAC clone RP11-85C4 from 2, complete... 40 1.9
13gb|AC091260.10| Mus musculus chromosome 9, clone RP23-208K9, com... 40 1.9
14gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, comp... 38 7.5
15ref|XM_706319.1| Candida albicans SC5314 hypothetical protein (C... 38 7.5
16ref|XM_706318.1| Candida albicans SC5314 hypothetical protein (C... 38 7.5
17gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome... 38 7.5
18gb|AC121902.2| Mus musculus BAC clone RP24-168N14 from 8, comple... 38 7.5
19gb|AY341862.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-li... 38 7.5
20emb|AL513163.8| Human DNA sequence from clone RP11-276B10 on chr... 38 7.5
21emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 38 7.5
22gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, co... 38 7.5
23gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, co... 38 7.5
24gb|AC116035.2| Homo sapiens chromosome 3 clone RP11-261F17, comp... 38 7.5
25gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, com... 38 7.5
26gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, comp... 38 7.5
27gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map... 38 7.5
28gb|AC155162.5| Mus musculus BAC clone RP24-421I19 from chromosom... 38 7.5
29gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete s... 38 7.5
30gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, r... 38 7.5
31gb|AF157613.2|AF157613 Toxoplasma gondii acetyl-CoA carboxylase ... 38 7.5
32gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, r... 38 7.5
33gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome 3R, r... 38 7.5
34gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, co... 38 7.5
35gb|AE003776.2| Drosophila melanogaster chromosome 3R, section 11... 38 7.5
36gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 ... 38 7.5
37gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome 2L, r... 38 7.5
38gb|AC172106.1| Mus musculus BAC clone RP23-395K8 from chromosome... 38 7.5
39gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, com... 38 7.5 
>gb|BC042934.1| Xenopus laevis hypothetical protein MGC53335, mRNA (cDNA clone
           MGC:53335 IMAGE:5570901), complete cds
          Length = 1013

 Score =  264 bits (133), Expect = 7e-68
 Identities = 140/141 (99%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 951 catggtatggtacacagatctgcctag-aagatttcaacaccaactttgttggggaggtt 893

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 833

                                
Query: 121 aaattccagtgatgaaaaatt 141
           |||||||||||||||||||||
Sbjct: 832 aaattccagtgatgaaaaatt 812
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>gb|L38595.1|XELMLC1F Xenopus laevis MLC1f/3f mRNA, complete cds
          Length = 959

 Score =  264 bits (133), Expect = 7e-68
 Identities = 140/141 (99%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 770 catggtatggtacacagatctgcctag-aagatttcaacaccaactttgttggggaggtt 712

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 652

                                
Query: 121 aaattccagtgatgaaaaatt 141
           |||||||||||||||||||||
Sbjct: 651 aaattccagtgatgaaaaatt 631
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>gb|BC061302.1| Xenopus tropicalis hypothetical protein MGC75774, mRNA (cDNA clone
           MGC:75774 IMAGE:5381870), complete cds
          Length = 1083

 Score =  133 bits (67), Expect = 2e-28
 Identities = 124/140 (88%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||  |||
Sbjct: 957 catggtatggtacacagatctgcctag-aagatttcgccaccaactttgtcgggg--gtt 901

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           | ||||||||||| |||||||||   ||||||||| |||||||| ||||||||| |||  
Sbjct: 900 gcatcgtcctgtttgatccgttt---taaatattggcagggttcatgaaagtaaatgttg 844

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 843 aaattccagtgatgaaaaat 824
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>ref|NM_203623.1| Xenopus tropicalis hypothetical protein MGC75774 (MGC75774), mRNA
          Length = 1083

 Score =  133 bits (67), Expect = 2e-28
 Identities = 124/140 (88%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||  |||
Sbjct: 957 catggtatggtacacagatctgcctag-aagatttcgccaccaactttgtcgggg--gtt 901

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           | ||||||||||| |||||||||   ||||||||| |||||||| ||||||||| |||  
Sbjct: 900 gcatcgtcctgtttgatccgttt---taaatattggcagggttcatgaaagtaaatgttg 844

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 843 aaattccagtgatgaaaaat 824
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>emb|CR760864.2| Xenopus tropicalis finished cDNA, clone TTpA003e07
          Length = 1154

 Score =  133 bits (67), Expect = 2e-28
 Identities = 124/140 (88%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||  |||
Sbjct: 926 catggtatggtacacagatctgcctag-aagatttcgccaccaactttgtcgggg--gtt 870

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           | ||||||||||| |||||||||   ||||||||| |||||||| ||||||||| |||  
Sbjct: 869 gcatcgtcctgtttgatccgttt---taaatattggcagggttcatgaaagtaaatgttg 813

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 812 aaattccagtgatgaaaaat 793
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>emb|CR926445.2| Xenopus tropicalis finished cDNA, clone TTpA007h22
          Length = 1013

 Score =  133 bits (67), Expect = 2e-28
 Identities = 124/140 (88%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||  |||
Sbjct: 756 catggtatggtacacagatctgcctag-aagatttcgccaccaactttgtcgggg--gtt 700

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           | ||||||||||| |||||||||   ||||||||| |||||||| ||||||||| |||  
Sbjct: 699 gcatcgtcctgtttgatccgttt---taaatattggcagggttcatgaaagtaaatgttg 643

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 642 aaattccagtgatgaaaaat 623
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>gb|BC089727.1| Xenopus tropicalis hypothetical protein MGC75774, mRNA (cDNA clone
           MGC:108361 IMAGE:7023257), complete cds
          Length = 1182

 Score =  133 bits (67), Expect = 2e-28
 Identities = 124/140 (88%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||  |||
Sbjct: 943 catggtatggtacacagatctgcctag-aagatttcgccaccaactttgtcgggg--gtt 887

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           | ||||||||||| |||||||||   ||||||||| |||||||| ||||||||| |||  
Sbjct: 886 gcatcgtcctgtttgatccgttt---taaatattggcagggttcatgaaagtaaatgttg 830

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 829 aaattccagtgatgaaaaat 810
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>emb|AJ009308.1|XLAJ9308 Xenopus laevis cDNA clone 29G3-1
          Length = 958

 Score =  117 bits (59), Expect = 1e-23
 Identities = 122/140 (87%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||||||||||||||| ||| ||||||||  | |||||||||| ||  |||||
Sbjct: 741 catggtatggtacacagatctgcttag-aagatttcgccgccaactttgtcgg--aggtt 685

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           ||||||||||||| |||||||||    |||||||  |||||||| ||||||||| | |||
Sbjct: 684 gaatcgtcctgtttgatccgtttg---aaatattagcagggttcatgaaagtaaatttca 628

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 627 aaattccagtgatgaaaaat 608
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>gb|BC041529.1| Xenopus laevis myosin light chain, alkali, fast skeletal muscle,
           mRNA (cDNA clone MGC:53175 IMAGE:5542998), complete cds
          Length = 1003

 Score =  101 bits (51), Expect = 6e-19
 Identities = 120/140 (85%), Gaps = 6/140 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           |||||||||| |||||||||||| ||| |||||||   | |||||||||| ||  |||||
Sbjct: 938 catggtatggaacacagatctgcttag-aagatttagccgccaactttgtcgg--aggtt 882

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           ||||||||||||| |||||||||    |||||||  |||||||| ||||||||| | |||
Sbjct: 881 gaatcgtcctgtttgatccgtttg---aaatattagcagggttcatgaaagtaaatttca 825

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 824 aaattccagtgatgaaaaat 805
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>gb|L38596.1|XELMLC1A Xenopus laevis MLC1 mRNA, complete cds
          Length = 1139

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 120/140 (85%), Gaps = 7/140 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggtatggtacacagatctgcctaggaagatttcaacaccaactttgttggggaggtt 60
           ||||||||||| ||||||||||| ||| |||||||   | |||||||||| ||  |||||
Sbjct: 921 catggtatggt-cacagatctgcttag-aagatttagccgccaactttgtcgg--aggtt 866

                                                                       
Query: 61  gaatcgtcctgttagatccgtttatttaaatattgacagggttcttgaaagtaattgtca 120
           ||||||||||||| |||||||||    |||||||  |||||||| ||||||||| | |||
Sbjct: 865 gaatcgtcctgtttgatccgtttg---aaatattagcagggttcatgaaagtaaatttca 809

                               
Query: 121 aaattccagtgatgaaaaat 140
           ||||||||||||||||||||
Sbjct: 808 aaattccagtgatgaaaaat 789
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>gb|AC169502.1| Mus musculus BAC clone RP24-409G12 from chromosome 9, complete sequence
          Length = 146217

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aaaattccagtgatgaaaaa 139
             ||||||||||||||||||||
Sbjct: 95121 aaaattccagtgatgaaaaa 95140
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>gb|AC007462.3| Homo sapiens BAC clone RP11-85C4 from 2, complete sequence
          Length = 163464

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    ttcttgaaagtaattgtcaaaatt 125
              ||||||||||||||| ||||||||
Sbjct: 125697 ttcttgaaagtaattttcaaaatt 125720
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>gb|AC091260.10| Mus musculus chromosome 9, clone RP23-208K9, complete sequence
          Length = 188754

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  aaaattccagtgatgaaaaa 139
            ||||||||||||||||||||
Sbjct: 7914 aaaattccagtgatgaaaaa 7933
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>gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, complete sequence
          Length = 218109

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    tttatttaaatattgacag 99
             |||||||||||||||||||
Sbjct: 11799 tttatttaaatattgacag 11817
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>ref|XM_706319.1| Candida albicans SC5314 hypothetical protein (CaO19.6658), mRNA
          Length = 1632

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 123  attccagtgatgaaaaatt 141
            |||||||||||||||||||
Sbjct: 1211 attccagtgatgaaaaatt 1193
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>ref|XM_706318.1| Candida albicans SC5314 hypothetical protein (CaO19.6657), mRNA
          Length = 384

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 123 attccagtgatgaaaaatt 141
           |||||||||||||||||||
Sbjct: 164 attccagtgatgaaaaatt 182
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>gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome 18, complete sequence
          Length = 179465

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   agtaattgtcaaaattcca 128
             |||||||||||||||||||
Sbjct: 16938 agtaattgtcaaaattcca 16956
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>gb|AC121902.2| Mus musculus BAC clone RP24-168N14 from 8, complete sequence
          Length = 151290

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 84    atttaaatattgacagggt 102
             |||||||||||||||||||
Sbjct: 86210 atttaaatattgacagggt 86192
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>gb|AY341862.1| Hordeum vulgare subsp. vulgare CTD-phosphatase-like protein (Cpl1)
            gene, complete cds; alternatively spliced
          Length = 5591

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 112  taattgtcaaaattccagt 130
            |||||||||||||||||||
Sbjct: 2411 taattgtcaaaattccagt 2393
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>emb|AL513163.8| Human DNA sequence from clone RP11-276B10 on chromosome X, complete
             sequence
          Length = 111786

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   tgtcaaaattccagtgatg 134
             |||||||||||||||||||
Sbjct: 29288 tgtcaaaattccagtgatg 29270
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
             hansenii
          Length = 1349926

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    gatttcaacaccaactttg 49
             |||||||||||||||||||
Sbjct: 30584 gatttcaacaccaactttg 30566
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>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence
          Length = 159617

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 122   aattccagtgatgaaaaat 140
             |||||||||||||||||||
Sbjct: 64338 aattccagtgatgaaaaat 64320
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>gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, complete sequence
          Length = 216006

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     gtttatttaaatattgaca 98
              |||||||||||||||||||
Sbjct: 103437 gtttatttaaatattgaca 103419
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>gb|AC116035.2| Homo sapiens chromosome 3 clone RP11-261F17, complete sequence
          Length = 170258

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     ctaggaagatttcaacacc 42
              |||||||||||||||||||
Sbjct: 155399 ctaggaagatttcaacacc 155417
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>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence
          Length = 203628

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 122    aattccagtgatgaaaaat 140
              |||||||||||||||||||
Sbjct: 201617 aattccagtgatgaaaaat 201599
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>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence
          Length = 142656

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   gtttatttaaatattgaca 98
            |||||||||||||||||||
Sbjct: 2570 gtttatttaaatattgaca 2552
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>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
             sequence
          Length = 92861

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    gatttcaacaccaactttg 49
             |||||||||||||||||||
Sbjct: 22140 gatttcaacaccaactttg 22122
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>gb|AC155162.5| Mus musculus BAC clone RP24-421I19 from chromosome 16, complete
             sequence
          Length = 200912

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    tttaaatattgacagggtt 103
             |||||||||||||||||||
Sbjct: 72081 tttaaatattgacagggtt 72063
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>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence
          Length = 466370

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 79     cgtttatttaaatattgac 97
              |||||||||||||||||||
Sbjct: 323631 cgtttatttaaatattgac 323613
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>gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone
             BACR48E08, complete sequence
          Length = 182726

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    aatcgtcctgttagatccg 80
             |||||||||||||||||||
Sbjct: 36157 aatcgtcctgttagatccg 36175
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>gb|AF157613.2|AF157613 Toxoplasma gondii acetyl-CoA carboxylase 2 (ACC2) gene, partial cds
          Length = 12955

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 8   tggtacacagatctgcctaggaa 30
           ||||||||||||| |||||||||
Sbjct: 270 tggtacacagatcagcctaggaa 248
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>gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, region 100A-100A, BAC clone
             BACR03C06, complete sequence
          Length = 156335

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   ttgaaagtaattgtcaaaa 123
             |||||||||||||||||||
Sbjct: 99193 ttgaaagtaattgtcaaaa 99211
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>gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome 3R, region 100A-100B, BAC clone
             BACR06P08, complete sequence
          Length = 180630

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   ttgaaagtaattgtcaaaa 123
             |||||||||||||||||||
Sbjct: 45485 ttgaaagtaattgtcaaaa 45503
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>gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, complete sequence
          Length = 176340

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 122   aattccagtgatgaaaaat 140
             |||||||||||||||||||
Sbjct: 20730 aattccagtgatgaaaaat 20712
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>gb|AE003776.2| Drosophila melanogaster chromosome 3R, section 114 of 118 of the
             complete sequence
          Length = 225764

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   ttgaaagtaattgtcaaaa 123
             |||||||||||||||||||
Sbjct: 40111 ttgaaagtaattgtcaaaa 40129
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>gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 of 83 of the
            complete sequence
          Length = 308447

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 62   aatcgtcctgttagatccg 80
            |||||||||||||||||||
Sbjct: 9294 aatcgtcctgttagatccg 9276
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>gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome 2L, region 21C5-21D1, P1 clone
             DS07610, complete sequence
          Length = 85095

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    aatcgtcctgttagatccg 80
             |||||||||||||||||||
Sbjct: 80740 aatcgtcctgttagatccg 80722
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>gb|AC172106.1| Mus musculus BAC clone RP23-395K8 from chromosome 16, complete sequence
          Length = 191119

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     tttaaatattgacagggtt 103
              |||||||||||||||||||
Sbjct: 161245 tttaaatattgacagggtt 161227
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>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence
          Length = 170460

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 120    aaaattccagtgatgaaaa 138
              |||||||||||||||||||
Sbjct: 155298 aaaattccagtgatgaaaa 155280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,695,968
Number of Sequences: 3902068
Number of extensions: 1695968
Number of successful extensions: 115377
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115269
Number of HSP's gapped (non-prelim): 86
length of query: 156
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 134
effective length of database: 17,147,199,772
effective search space: 2297724769448
effective search space used: 2297724769448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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