| Clone Name | rbags3m19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 83064 ccactacatcaaatggcg 83047
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 12903 ccactacatcaaatggcg 12886
>ref|XM_381124.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00948.1) partial mRNA Length = 1707 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 tcaaatggcgatgccatg 32 |||||||||||||||||| Sbjct: 560 tcaaatggcgatgccatg 543
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 36.2 bits (18), Expect = 8.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 22 gcgatgccatggagcgggctac 43 |||| ||||||||||||||||| Sbjct: 2336291 gcgaagccatggagcgggctac 2336312
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 1876051 ccactacatcaaatggcg 1876034
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 1941348 ccactacatcaaatggcg 1941331
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tccactacatcaaatggc 23 |||||||||||||||||| Sbjct: 81505 tccactacatcaaatggc 81488
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 catcaaatggcgatgcca 30 |||||||||||||||||| Sbjct: 1997689 catcaaatggcgatgcca 1997706
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 1949129 ccactacatcaaatggcg 1949112
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 1876002 ccactacatcaaatggcg 1875985
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 70741 ccactacatcaaatggcg 70724
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 ccactacatcaaatggcg 24 |||||||||||||||||| Sbjct: 92170 ccactacatcaaatggcg 92187 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 250,081 Number of Sequences: 3902068 Number of extensions: 250081 Number of successful extensions: 13759 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 13689 Number of HSP's gapped (non-prelim): 70 length of query: 61 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 40 effective length of database: 17,151,101,840 effective search space: 686044073600 effective search space used: 686044073600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)