ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags4b10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 341 bits (172), Expect = 2e-90 Identities = 364/428 (85%) Strand = Plus / Plus Query: 203 cttaatcggccttcacagacgagaagagatagtgcacgaagcagaacgaggagatgaacc 262 ||||||| || ||||| || ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 33976037 cttaatctgctttcacggatgagaaaagatagtggacgaagcagaatgatgaaatgaatc 33976096 Query: 263 caaccgtgccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtaga 322 | || || || || |||||||| || || || ||||||||||| ||||||||||| |||| Sbjct: 33976097 ccactgttccagtagccagcataatagcaataaccatgaagagtgagtagccgagataga 33976156 Query: 323 gggtcgccgacaccggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagt 382 ||||||||||||| || || || | |||||| ||||| || || || ||||||||||||| Sbjct: 33976157 gggtcgccgacacaggtccactcaagctctttaggtcaaaaacaagatagttgatcgagt 33976216 Query: 383 agaggaagatgtagatggccacggatccggacgagaagaatgacttccaccaccacttcc 442 | | ||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| |||| Sbjct: 33976217 acaagaaaatgtagatcgccacagatccagatgagaagaatgatttccaccaccatttcc 33976276 Query: 443 agtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctcggcgcagacgatga 502 | |||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| || | Sbjct: 33976277 aatcctcgacacagagatgcatgtaggtcagaacaagggaaacctcagcgcagacaataa 33976336 Query: 503 ccaggagcagcatcacgatgaagaggaacccgaagacgtagtacacgcggcccatccaga 562 | ||||||| || |||||||||||||| || ||||| |||||||| || |||||||| | Sbjct: 33976337 caaggagcaacaggacgatgaagaggaatccaaagacatagtacacacgccccatccata 33976396 Query: 563 tgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggcac 622 |||| |||||||||||||||||||||||||||||||| || |||||||||||||| || | Sbjct: 33976397 tgctagacatgatgaagaagagctcgatgaacagggtaccaaagggcagtgtgccagcgc 33976456 Query: 623 cgagaacc 630 |||||||| Sbjct: 33976457 cgagaacc 33976464
>dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_D07 Length = 110585 Score = 341 bits (172), Expect = 2e-90 Identities = 364/428 (85%) Strand = Plus / Plus Query: 203 cttaatcggccttcacagacgagaagagatagtgcacgaagcagaacgaggagatgaacc 262 ||||||| || ||||| || ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 3312 cttaatctgctttcacggatgagaaaagatagtggacgaagcagaatgatgaaatgaatc 3371 Query: 263 caaccgtgccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtaga 322 | || || || || |||||||| || || || ||||||||||| ||||||||||| |||| Sbjct: 3372 ccactgttccagtagccagcataatagcaataaccatgaagagtgagtagccgagataga 3431 Query: 323 gggtcgccgacaccggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagt 382 ||||||||||||| || || || | |||||| ||||| || || || ||||||||||||| Sbjct: 3432 gggtcgccgacacaggtccactcaagctctttaggtcaaaaacaagatagttgatcgagt 3491 Query: 383 agaggaagatgtagatggccacggatccggacgagaagaatgacttccaccaccacttcc 442 | | ||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| |||| Sbjct: 3492 acaagaaaatgtagatcgccacagatccagatgagaagaatgatttccaccaccatttcc 3551 Query: 443 agtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctcggcgcagacgatga 502 | |||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| || | Sbjct: 3552 aatcctcgacacagagatgcatgtaggtcagaacaagggaaacctcagcgcagacaataa 3611 Query: 503 ccaggagcagcatcacgatgaagaggaacccgaagacgtagtacacgcggcccatccaga 562 | ||||||| || |||||||||||||| || ||||| |||||||| || |||||||| | Sbjct: 3612 caaggagcaacaggacgatgaagaggaatccaaagacatagtacacacgccccatccata 3671 Query: 563 tgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggcac 622 |||| |||||||||||||||||||||||||||||||| || |||||||||||||| || | Sbjct: 3672 tgctagacatgatgaagaagagctcgatgaacagggtaccaaagggcagtgtgccagcgc 3731 Query: 623 cgagaacc 630 |||||||| Sbjct: 3732 cgagaacc 3739
>dbj|AK069053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004J10, full insert sequence Length = 2414 Score = 341 bits (172), Expect = 2e-90 Identities = 364/428 (85%) Strand = Plus / Minus Query: 203 cttaatcggccttcacagacgagaagagatagtgcacgaagcagaacgaggagatgaacc 262 ||||||| || ||||| || ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 2207 cttaatctgctttcacggatgagaaaagatagtggacgaagcagaatgatgaaatgaatc 2148 Query: 263 caaccgtgccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtaga 322 | || || || || |||||||| || || || ||||||||||| ||||||||||| |||| Sbjct: 2147 ccactgttccagtagccagcataatagcaataaccatgaagagtgagtagccgagataga 2088 Query: 323 gggtcgccgacaccggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagt 382 ||||||||||||| || || || | |||||| ||||| || || || ||||||||||||| Sbjct: 2087 gggtcgccgacacaggtccactcaagctctttaggtcaaaaacaagatagttgatcgagt 2028 Query: 383 agaggaagatgtagatggccacggatccggacgagaagaatgacttccaccaccacttcc 442 | | ||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| |||| Sbjct: 2027 acaagaaaatgtagatcgccacagatccagatgagaagaatgatttccaccaccatttcc 1968 Query: 443 agtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctcggcgcagacgatga 502 | |||||||| ||||| |||||||||||||| || ||||| ||||| |||||||| || | Sbjct: 1967 aatcctcgacacagagatgcatgtaggtcagaacaagggaaacctcagcgcagacaataa 1908 Query: 503 ccaggagcagcatcacgatgaagaggaacccgaagacgtagtacacgcggcccatccaga 562 | ||||||| || |||||||||||||| || ||||| |||||||| || |||||||| | Sbjct: 1907 caaggagcaacaggacgatgaagaggaatccaaagacatagtacacacgccccatccata 1848 Query: 563 tgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggcac 622 |||| |||||||||||||||||||||||||||||||| || |||||||||||||| || | Sbjct: 1847 tgctagacatgatgaagaagagctcgatgaacagggtaccaaagggcagtgtgccagcgc 1788 Query: 623 cgagaacc 630 |||||||| Sbjct: 1787 cgagaacc 1780
>gb|AY105119.1| Zea mays PCO114025 mRNA sequence Length = 1163 Score = 240 bits (121), Expect = 5e-60 Identities = 227/261 (86%), Gaps = 1/261 (0%) Strand = Plus / Minus Query: 370 tagttgatcgagtagaggaagatgtagatggccacggatccggacgagaagaatgacttc 429 |||||||| ||||| | || |||||||| ||||| ||||| || |||||||||| |||| Sbjct: 1125 tagttgatggagtacaagacaatgtagattgccaccgatccagatgagaagaatg-cttc 1067 Query: 430 caccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctcg 489 |||||||||||||| ||||| || || ||||||||||| || || |||||||| || || Sbjct: 1066 caccaccacttccaatcctcaacacacaggtgcatgtaagttagaaccagggaaacttca 1007 Query: 490 gcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacacg 549 || ||||| || ||||||||||||| |||| |||||||||||| ||||| |||||||| Sbjct: 1006 gcacagacaataaccaggagcagcaagacgacgaagaggaacccaaagacatagtacaca 947 Query: 550 cggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggc 609 || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 946 cgacccatccatatgcttgacatgatgaagaagagctcgatgaatagggtgccgaagggc 887 Query: 610 agtgtgccggcaccgagaacc 630 |||||||| ||||| |||||| Sbjct: 886 agtgtgccagcaccaagaacc 866
>ref|NM_122907.1| Arabidopsis thaliana transporter AT5G35160 mRNA, complete cds Length = 1884 Score = 149 bits (75), Expect = 1e-32 Identities = 306/383 (79%) Strand = Plus / Minus Query: 232 tagtgcacgaagcagaacgaggagatgaacccaaccgtgccggtggccagcatgatggcg 291 ||||| ||||| ||||| || |||| ||| ||||| || || || || |||||||| || Sbjct: 1856 tagtgtacgaaccagaaggaagagaggaaaccaacggtacctgttgcgagcatgatagcc 1797 Query: 292 atgaccatgaagagcgagtagccgaggtagagggtcgccgacaccggcccgcttaggctc 351 | |||||| ||||| ||||||||||| || || ||||| || || || || || | ||| Sbjct: 1796 aggaccataaagagagagtagccgagataaagagtcgctgaaacgggtccactcaagctt 1737 Query: 352 ttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagatggccacggatccg 411 ||||||||||| || || ||||| || ||||| | |||||||||||| || |||||||| Sbjct: 1736 ttgaggtcgaagacgagatagtttatggagtatatgaagatgtagattgcaacggatcca 1677 Query: 412 gacgagaagaatgacttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtc 471 || | ||||| || |||||||||||||| |||| || ||||| ||||||||||| || Sbjct: 1676 gatgcaaagaaggatttccaccaccacttatagtcttcaacgcacaggtgcatgtatgtt 1617 Query: 472 aggaccagggagacctcggcgcagacgatgaccaggagcagcatcacgatgaagaggaac 531 || || ||||| |||||||| || || | ||| || || | || || | || ||||| Sbjct: 1616 agcactagggaaacctcggcacacactacgacaagaaggatcaagactacaaaaaggaat 1557 Query: 532 ccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaagaagagctcgatg 591 || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 1556 ccaaagacgtagtagacacggcccatccagatgctggacatgataaagaaaagctcgatg 1497 Query: 592 aacagggtgccgaagggcagtgt 614 || ||||| ||||| || ||||| Sbjct: 1496 aagagggtaccgaatggaagtgt 1474
>gb|AY128866.1| Arabidopsis thaliana putative protein (At5g35160) mRNA, complete cds Length = 1366 Score = 149 bits (75), Expect = 1e-32 Identities = 306/383 (79%) Strand = Plus / Minus Query: 232 tagtgcacgaagcagaacgaggagatgaacccaaccgtgccggtggccagcatgatggcg 291 ||||| ||||| ||||| || |||| ||| ||||| || || || || |||||||| || Sbjct: 1250 tagtgtacgaaccagaaggaagagaggaaaccaacggtacctgttgcgagcatgatagcc 1191 Query: 292 atgaccatgaagagcgagtagccgaggtagagggtcgccgacaccggcccgcttaggctc 351 | |||||| ||||| ||||||||||| || || ||||| || || || || || | ||| Sbjct: 1190 aggaccataaagagagagtagccgagataaagagtcgctgaaacgggtccactcaagctt 1131 Query: 352 ttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagatggccacggatccg 411 ||||||||||| || || ||||| || ||||| | |||||||||||| || |||||||| Sbjct: 1130 ttgaggtcgaagacgagatagtttatggagtatatgaagatgtagattgcaacggatcca 1071 Query: 412 gacgagaagaatgacttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtc 471 || | ||||| || |||||||||||||| |||| || ||||| ||||||||||| || Sbjct: 1070 gatgcaaagaaggatttccaccaccacttatagtcttcaacgcacaggtgcatgtatgtt 1011 Query: 472 aggaccagggagacctcggcgcagacgatgaccaggagcagcatcacgatgaagaggaac 531 || || ||||| |||||||| || || | ||| || || | || || | || ||||| Sbjct: 1010 agcactagggaaacctcggcacacactacgacaagaaggatcaagactacaaaaaggaat 951 Query: 532 ccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaagaagagctcgatg 591 || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 950 ccaaagacgtagtagacacggcccatccagatgctggacatgataaagaaaagctcgatg 891 Query: 592 aacagggtgccgaagggcagtgt 614 || ||||| ||||| || ||||| Sbjct: 890 aagagggtaccgaatggaagtgt 868
>gb|AY099749.1| Arabidopsis thaliana putative protein (At5g35160) mRNA, complete cds Length = 1581 Score = 149 bits (75), Expect = 1e-32 Identities = 306/383 (79%) Strand = Plus / Minus Query: 232 tagtgcacgaagcagaacgaggagatgaacccaaccgtgccggtggccagcatgatggcg 291 ||||| ||||| ||||| || |||| ||| ||||| || || || || |||||||| || Sbjct: 1269 tagtgtacgaaccagaaggaagagaggaaaccaacggtacctgttgcgagcatgatagcc 1210 Query: 292 atgaccatgaagagcgagtagccgaggtagagggtcgccgacaccggcccgcttaggctc 351 | |||||| ||||| ||||||||||| || || ||||| || || || || || | ||| Sbjct: 1209 aggaccataaagagagagtagccgagataaagagtcgctgaaacgggtccactcaagctt 1150 Query: 352 ttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagatggccacggatccg 411 ||||||||||| || || ||||| || ||||| | |||||||||||| || |||||||| Sbjct: 1149 ttgaggtcgaagacgagatagtttatggagtatatgaagatgtagattgcaacggatcca 1090 Query: 412 gacgagaagaatgacttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtc 471 || | ||||| || |||||||||||||| |||| || ||||| ||||||||||| || Sbjct: 1089 gatgcaaagaaggatttccaccaccacttatagtcttcaacgcacaggtgcatgtatgtt 1030 Query: 472 aggaccagggagacctcggcgcagacgatgaccaggagcagcatcacgatgaagaggaac 531 || || ||||| |||||||| || || | ||| || || | || || | || ||||| Sbjct: 1029 agcactagggaaacctcggcacacactacgacaagaaggatcaagactacaaaaaggaat 970 Query: 532 ccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaagaagagctcgatg 591 || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 969 ccaaagacgtagtagacacggcccatccagatgctggacatgataaagaaaagctcgatg 910 Query: 592 aacagggtgccgaagggcagtgt 614 || ||||| ||||| || ||||| Sbjct: 909 aagagggtaccgaatggaagtgt 887
>dbj|AP000421.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T13C12 Length = 72800 Score = 149 bits (75), Expect = 1e-32 Identities = 306/383 (79%) Strand = Plus / Minus Query: 232 tagtgcacgaagcagaacgaggagatgaacccaaccgtgccggtggccagcatgatggcg 291 ||||| ||||| ||||| || |||| ||| ||||| || || || || |||||||| || Sbjct: 67698 tagtgtacgaaccagaaggaagagaggaaaccaacggtacctgttgcgagcatgatagcc 67639 Query: 292 atgaccatgaagagcgagtagccgaggtagagggtcgccgacaccggcccgcttaggctc 351 | |||||| ||||| ||||||||||| || || ||||| || || || || || | ||| Sbjct: 67638 aggaccataaagagagagtagccgagataaagagtcgctgaaacgggtccactcaagctt 67579 Query: 352 ttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagatggccacggatccg 411 ||||||||||| || || ||||| || ||||| | |||||||||||| || |||||||| Sbjct: 67578 ttgaggtcgaagacgagatagtttatggagtatatgaagatgtagattgcaacggatcca 67519 Query: 412 gacgagaagaatgacttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtc 471 || | ||||| || |||||||||||||| |||| || ||||| ||||||||||| || Sbjct: 67518 gatgcaaagaaggatttccaccaccacttatagtcttcaacgcacaggtgcatgtatgtt 67459 Query: 472 aggaccagggagacctcggcgcagacgatgaccaggagcagcatcacgatgaagaggaac 531 || || ||||| |||||||| || || | ||| || || | || || | || ||||| Sbjct: 67458 agcactagggaaacctcggcacacactacgacaagaaggatcaagactacaaaaaggaat 67399 Query: 532 ccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaagaagagctcgatg 591 || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 67398 ccaaagacgtagtagacacggcccatccagatgctggacatgataaagaaaagctcgatg 67339 Query: 592 aacagggtgccgaagggcagtgt 614 || ||||| ||||| || ||||| Sbjct: 67338 aagagggtaccgaatggaagtgt 67316
>gb|AF080121.1|T25C13 Arabidopsis thaliana BAC T25C13 Length = 120067 Score = 149 bits (75), Expect = 1e-32 Identities = 306/383 (79%) Strand = Plus / Minus Query: 232 tagtgcacgaagcagaacgaggagatgaacccaaccgtgccggtggccagcatgatggcg 291 ||||| ||||| ||||| || |||| ||| ||||| || || || || |||||||| || Sbjct: 28411 tagtgtacgaaccagaaggaagagaggaaaccaacggtacctgttgcgagcatgatagcc 28352 Query: 292 atgaccatgaagagcgagtagccgaggtagagggtcgccgacaccggcccgcttaggctc 351 | |||||| ||||| ||||||||||| || || ||||| || || || || || | ||| Sbjct: 28351 aggaccataaagagagagtagccgagataaagagtcgctgaaacgggtccactcaagctt 28292 Query: 352 ttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagatggccacggatccg 411 ||||||||||| || || ||||| || ||||| | |||||||||||| || |||||||| Sbjct: 28291 ttgaggtcgaagacgagatagtttatggagtatatgaagatgtagattgcaacggatcca 28232 Query: 412 gacgagaagaatgacttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtc 471 || | ||||| || |||||||||||||| |||| || ||||| ||||||||||| || Sbjct: 28231 gatgcaaagaaggatttccaccaccacttatagtcttcaacgcacaggtgcatgtatgtt 28172 Query: 472 aggaccagggagacctcggcgcagacgatgaccaggagcagcatcacgatgaagaggaac 531 || || ||||| |||||||| || || | ||| || || | || || | || ||||| Sbjct: 28171 agcactagggaaacctcggcacacactacgacaagaaggatcaagactacaaaaaggaat 28112 Query: 532 ccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaagaagagctcgatg 591 || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 28111 ccaaagacgtagtagacacggcccatccagatgctggacatgataaagaaaagctcgatg 28052 Query: 592 aacagggtgccgaagggcagtgt 614 || ||||| ||||| || ||||| Sbjct: 28051 aagagggtaccgaatggaagtgt 28029
>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086E02, complete sequence Length = 150474 Score = 129 bits (65), Expect = 1e-26 Identities = 275/345 (79%) Strand = Plus / Plus Query: 279 cagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgccgacaccgg 338 |||||||||||| | | |||||| || || ||||| |||||||| || || || ||||| Sbjct: 124995 cagcatgatggcaagggccatgatcagggaatagccaaggtagagcgttgctgagaccgg 125054 Query: 339 cccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagat 398 || ||||||||| | ||||||||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 125055 tccacttaggctcctaaggtcgaacacgaggtagttgattgagtataggaagacgtagaa 125114 Query: 399 ggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcagag 458 ||| || || || || | ||||| | ||||||||||||||||||||||| || || || Sbjct: 125115 ggcgacagaaccagaagcaaagaaggctttccaccaccacttccagtcctccacacaaag 125174 Query: 459 gtgcatgtaggtcaggaccagggagacctcggcgcagacgatgaccaggagcagcatcac 518 ||||||||||| ||||| | || ||||| | ||||| |||||||| || | | || Sbjct: 125175 atgcatgtaggttaggactaaagaaacctcaccacagactatgaccagcaggaaaaggac 125234 Query: 519 gatgaagaggaacccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaa 578 ||||| ||||| || ||||||||||| | | |||| ||| ||||| |||| |||||| Sbjct: 125235 aatgaacaggaagccaaagacgtagtagaacctccccaaccaaatgctagacaggatgaa 125294 Query: 579 gaagagctcgatgaacagggtgccgaagggcagtgtgccggcacc 623 ||| ||||| ||||| |||||||| ||||||| ||| || ||||| Sbjct: 125295 gaaaagctcaatgaagagggtgccaaagggcaatgttccagcacc 125339
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 129 bits (65), Expect = 1e-26 Identities = 275/345 (79%) Strand = Plus / Plus Query: 279 cagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgccgacaccgg 338 |||||||||||| | | |||||| || || ||||| |||||||| || || || ||||| Sbjct: 23162 cagcatgatggcaagggccatgatcagggaatagccaaggtagagcgttgctgagaccgg 23221 Query: 339 cccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagat 398 || ||||||||| | ||||||||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 23222 tccacttaggctcctaaggtcgaacacgaggtagttgattgagtataggaagacgtagaa 23281 Query: 399 ggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcagag 458 ||| || || || || | ||||| | ||||||||||||||||||||||| || || || Sbjct: 23282 ggcgacagaaccagaagcaaagaaggctttccaccaccacttccagtcctccacacaaag 23341 Query: 459 gtgcatgtaggtcaggaccagggagacctcggcgcagacgatgaccaggagcagcatcac 518 ||||||||||| ||||| | || ||||| | ||||| |||||||| || | | || Sbjct: 23342 atgcatgtaggttaggactaaagaaacctcaccacagactatgaccagcaggaaaaggac 23401 Query: 519 gatgaagaggaacccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaa 578 ||||| ||||| || ||||||||||| | | |||| ||| ||||| |||| |||||| Sbjct: 23402 aatgaacaggaagccaaagacgtagtagaacctccccaaccaaatgctagacaggatgaa 23461 Query: 579 gaagagctcgatgaacagggtgccgaagggcagtgtgccggcacc 623 ||| ||||| ||||| |||||||| ||||||| ||| || ||||| Sbjct: 23462 gaaaagctcaatgaagagggtgccaaagggcaatgttccagcacc 23506
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 275/345 (79%) Strand = Plus / Plus Query: 279 cagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgccgacaccgg 338 |||||||||||| | | |||||| || || ||||| |||||||| || || || ||||| Sbjct: 4047130 cagcatgatggcaagggccatgatcagggaatagccaaggtagagcgttgctgagaccgg 4047189 Query: 339 cccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagat 398 || ||||||||| | ||||||||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 4047190 tccacttaggctcctaaggtcgaacacgaggtagttgattgagtataggaagacgtagaa 4047249 Query: 399 ggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcagag 458 ||| || || || || | ||||| | ||||||||||||||||||||||| || || || Sbjct: 4047250 ggcgacagaaccagaagcaaagaaggctttccaccaccacttccagtcctccacacaaag 4047309 Query: 459 gtgcatgtaggtcaggaccagggagacctcggcgcagacgatgaccaggagcagcatcac 518 ||||||||||| ||||| | || ||||| | ||||| |||||||| || | | || Sbjct: 4047310 atgcatgtaggttaggactaaagaaacctcaccacagactatgaccagcaggaaaaggac 4047369 Query: 519 gatgaagaggaacccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaa 578 ||||| ||||| || ||||||||||| | | |||| ||| ||||| |||| |||||| Sbjct: 4047370 aatgaacaggaagccaaagacgtagtagaacctccccaaccaaatgctagacaggatgaa 4047429 Query: 579 gaagagctcgatgaacagggtgccgaagggcagtgtgccggcacc 623 ||| ||||| ||||| |||||||| ||||||| ||| || ||||| Sbjct: 4047430 gaaaagctcaatgaagagggtgccaaagggcaatgttccagcacc 4047474
>dbj|AK100711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115H14, full insert sequence Length = 2407 Score = 129 bits (65), Expect = 1e-26 Identities = 275/345 (79%) Strand = Plus / Minus Query: 279 cagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgccgacaccgg 338 |||||||||||| | | |||||| || || ||||| |||||||| || || || ||||| Sbjct: 2011 cagcatgatggcaagggccatgatcagggaatagccaaggtagagcgttgctgagaccgg 1952 Query: 339 cccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagat 398 || ||||||||| | ||||||||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 1951 tccacttaggctcctaaggtcgaacacgaggtagttgattgagtataggaagacgtagaa 1892 Query: 399 ggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcagag 458 ||| || || || || | ||||| | ||||||||||||||||||||||| || || || Sbjct: 1891 ggcgacagaaccagaagcaaagaaggctttccaccaccacttccagtcctccacacaaag 1832 Query: 459 gtgcatgtaggtcaggaccagggagacctcggcgcagacgatgaccaggagcagcatcac 518 ||||||||||| ||||| | || ||||| | ||||| |||||||| || | | || Sbjct: 1831 atgcatgtaggttaggactaaagaaacctcaccacagactatgaccagcaggaaaaggac 1772 Query: 519 gatgaagaggaacccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaa 578 ||||| ||||| || ||||||||||| | | |||| ||| ||||| |||| |||||| Sbjct: 1771 aatgaacaggaagccaaagacgtagtagaacctccccaaccaaatgctagacaggatgaa 1712 Query: 579 gaagagctcgatgaacagggtgccgaagggcagtgtgccggcacc 623 ||| ||||| ||||| |||||||| ||||||| ||| || ||||| Sbjct: 1711 gaaaagctcaatgaagagggtgccaaagggcaatgttccagcacc 1667
>dbj|AK060842.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D06, full insert sequence Length = 1089 Score = 121 bits (61), Expect = 3e-24 Identities = 274/345 (79%) Strand = Plus / Minus Query: 279 cagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgccgacaccgg 338 |||||||||||| | | |||||| || || ||||| |||||||| || || || ||||| Sbjct: 684 cagcatgatggcaagggccatgatcagggaatagccaaggtagagcgttgctgagaccgg 625 Query: 339 cccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtagat 398 || ||||||||| | ||||||||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 624 tccacttaggctcctaaggtcgaacacgaggtagttgattgagtataggaagacgtagaa 565 Query: 399 ggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcagag 458 ||| || || || || | ||||| | ||||||||||||||||||||||| || || || Sbjct: 564 ggcgacagaaccagaagcaaagaaggctttccaccaccacttccagtcctccacacaaag 505 Query: 459 gtgcatgtaggtcaggaccagggagacctcggcgcagacgatgaccaggagcagcatcac 518 ||||||||||| ||||| | || ||||| | ||||| | |||||| || | | || Sbjct: 504 atgcatgtaggttaggactaaagaaacctcaccacagactacgaccagcaggaaaaggac 445 Query: 519 gatgaagaggaacccgaagacgtagtacacgcggcccatccagatgcttgacatgatgaa 578 ||||| ||||| || ||||||||||| | | |||| ||| ||||| |||| |||||| Sbjct: 444 aatgaacaggaagccaaagacgtagtagaacctccccaaccaaatgctagacaggatgaa 385 Query: 579 gaagagctcgatgaacagggtgccgaagggcagtgtgccggcacc 623 ||| ||||| ||||| |||||||| ||||||| ||| || ||||| Sbjct: 384 gaaaagctcaatgaagagggtgccaaagggcaatgttccagcacc 340
>gb|AY106059.1| Zea mays PCO095932 mRNA sequence Length = 1115 Score = 115 bits (58), Expect = 2e-22 Identities = 232/290 (80%) Strand = Plus / Minus Query: 217 acagacgagaagagatagtgcacgaagcagaacgaggagatgaacccaaccgtgccggtg 276 |||||||||||||| ||||| |||||| |||| ||| | ||| |||| | ||| ||| Sbjct: 1015 acagacgagaagaggtagtggacgaagtagaaggagagcaggaaaccaatggcgccagtg 956 Query: 277 gccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgccgacacc 336 | |||||||| || | | |||||| || || ||||| |||||||| || || || || Sbjct: 955 gagagcatgattgcaagggccatgatcagggaatagccaaggtagagtgtggcagaaact 896 Query: 337 ggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtag 396 || ||||| |||||| |||| ||||||||||||||||| || ||||||||||| | ||| Sbjct: 895 ggtccgctcaggctcctgagatcgaacaccaggtagttaatagagtagaggaacacatag 836 Query: 397 atggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcag 456 | || || || || || | ||||| | |||||||||||| ||||||||||| ||||| Sbjct: 835 aatgcgacagagccagaagcaaagaaggccttccaccaccatttccagtcctccacgcaa 776 Query: 457 aggtgcatgtaggtcaggaccagggagacctcggcgcagacgatgaccag 506 ||||||||||||||||||||||| || ||||| | ||||| |||||||| Sbjct: 775 aggtgcatgtaggtcaggaccagagaaacctcaccacagactatgaccag 726
>ref|XM_483157.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2616 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 337 ggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtag 396 |||||||| ||||| ||||||| || |||| ||||||||| ||||||||||| | ||| Sbjct: 2006 ggcccgctcaggcttctgaggtcaaataccaagtagttgatggagtagaggaacacatag 1947 Query: 397 atggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcag 456 || || || ||||| || | ||||| | |||||||||||| |||||||||| |||||| Sbjct: 1946 attgcaacagatcctgaggcaaagaaagctttccaccaccacctccagtcctccacgcag 1887 Query: 457 aggtgcatgtaggtcaggaccagggagacctcggcgcagacgatgac 503 |||| |||||| ||||| || | |||||||| |||||||| ||||| Sbjct: 1886 aggttcatgtatgtcagaacaacagagacctcagcgcagacaatgac 1840 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 562 atgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggca 621 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||| || ||| Sbjct: 1781 atgcttgacagaataaagaagagctcaatgaacagggttccgaatggcagtgttcctgca 1722 Query: 622 cc 623 || Sbjct: 1721 cc 1720
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 337 ggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtag 396 |||||||| ||||| ||||||| || |||| ||||||||| ||||||||||| | ||| Sbjct: 24531054 ggcccgctcaggcttctgaggtcaaataccaagtagttgatggagtagaggaacacatag 24531113 Query: 397 atggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcag 456 || || || ||||| || | ||||| | |||||||||||| |||||||||| |||||| Sbjct: 24531114 attgcaacagatcctgaggcaaagaaagctttccaccaccacctccagtcctccacgcag 24531173 Query: 457 aggtgcatgtaggtcaggaccagggagacctcggcgcagacgatgac 503 |||| |||||| ||||| || | |||||||| |||||||| ||||| Sbjct: 24531174 aggttcatgtatgtcagaacaacagagacctcagcgcagacaatgac 24531220 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 11454961 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 11454902 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 11454901 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 11454842 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 11454841 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 11454782 Query: 609 cag 611 ||| Sbjct: 11454781 cag 11454779 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 562 atgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggca 621 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||| || ||| Sbjct: 24531279 atgcttgacagaataaagaagagctcaatgaacagggttccgaatggcagtgttcctgca 24531338 Query: 622 cc 623 || Sbjct: 24531339 cc 24531340 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 11455120 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 11455061 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 11455060 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 11455017
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 337 ggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtag 396 |||||||| ||||| ||||||| || |||| ||||||||| ||||||||||| | ||| Sbjct: 39314 ggcccgctcaggcttctgaggtcaaataccaagtagttgatggagtagaggaacacatag 39373 Query: 397 atggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcag 456 || || || ||||| || | ||||| | |||||||||||| |||||||||| |||||| Sbjct: 39374 attgcaacagatcctgaggcaaagaaagctttccaccaccacctccagtcctccacgcag 39433 Query: 457 aggtgcatgtaggtcaggaccagggagacctcggcgcagacgatgac 503 |||| |||||| ||||| || | |||||||| |||||||| ||||| Sbjct: 39434 aggttcatgtatgtcagaacaacagagacctcagcgcagacaatgac 39480 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 562 atgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggca 621 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||| || ||| Sbjct: 39539 atgcttgacagaataaagaagagctcaatgaacagggttccgaatggcagtgttcctgca 39598 Query: 622 cc 623 || Sbjct: 39599 cc 39600
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 337 ggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtag 396 |||||||| ||||| ||||||| || |||| ||||||||| ||||||||||| | ||| Sbjct: 146770 ggcccgctcaggcttctgaggtcaaataccaagtagttgatggagtagaggaacacatag 146829 Query: 397 atggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcag 456 || || || ||||| || | ||||| | |||||||||||| |||||||||| |||||| Sbjct: 146830 attgcaacagatcctgaggcaaagaaagctttccaccaccacctccagtcctccacgcag 146889 Query: 457 aggtgcatgtaggtcaggaccagggagacctcggcgcagacgatgac 503 |||| |||||| ||||| || | |||||||| |||||||| ||||| Sbjct: 146890 aggttcatgtatgtcagaacaacagagacctcagcgcagacaatgac 146936 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 562 atgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggca 621 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||| || ||| Sbjct: 146995 atgcttgacagaataaagaagagctcaatgaacagggttccgaatggcagtgttcctgca 147054 Query: 622 cc 623 || Sbjct: 147055 cc 147056
>dbj|AK102663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101K01, full insert sequence Length = 2616 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 337 ggcccgcttaggctcttgaggtcgaacaccaggtagttgatcgagtagaggaagatgtag 396 |||||||| ||||| ||||||| || |||| ||||||||| ||||||||||| | ||| Sbjct: 2006 ggcccgctcaggcttctgaggtcaaataccaagtagttgatggagtagaggaacacatag 1947 Query: 397 atggccacggatccggacgagaagaatgacttccaccaccacttccagtcctcgacgcag 456 || || || ||||| || | ||||| | |||||||||||| |||||||||| |||||| Sbjct: 1946 attgcaacagatcctgaggcaaagaaagctttccaccaccacctccagtcctccacgcag 1887 Query: 457 aggtgcatgtaggtcaggaccagggagacctcggcgcagacgatgac 503 |||| |||||| ||||| || | |||||||| |||||||| ||||| Sbjct: 1886 aggttcatgtatgtcagaacaacagagacctcagcgcagacaatgac 1840 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 562 atgcttgacatgatgaagaagagctcgatgaacagggtgccgaagggcagtgtgccggca 621 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||| || ||| Sbjct: 1781 atgcttgacagaataaagaagagctcaatgaacagggttccgaatggcagtgttcctgca 1722 Query: 622 cc 623 || Sbjct: 1721 cc 1720
>ref|NM_117335.2| Arabidopsis thaliana transporter AT4G12650 mRNA, complete cds Length = 1813 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggacca 478 |||||||||||| ||||||| || |||||||||||||||||||||| ||||| Sbjct: 1361 ttccaccaccacctccagtcttcaacgcagaggtgcatgtaggtcaagacca 1310
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggacca 478 |||||||||||| ||||||| || |||||||||||||||||||||| ||||| Sbjct: 140557 ttccaccaccacctccagtcttcaacgcagaggtgcatgtaggtcaagacca 140608
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project) Length = 137519 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggacca 478 |||||||||||| ||||||| || |||||||||||||||||||||| ||||| Sbjct: 136025 ttccaccaccacctccagtcttcaacgcagaggtgcatgtaggtcaagacca 136076
>dbj|AK176134.1| Arabidopsis thaliana mRNA for putative protein, partial cds, clone: RAFL22-94-G13 Length = 922 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggacca 478 |||||||||||| ||||||| || |||||||||||||||||||||| ||||| Sbjct: 461 ttccaccaccacctccagtcttcaacgcagaggtgcatgtaggtcaagacca 410
>dbj|AK175697.1| Arabidopsis thaliana mRNA for putative protein, partial cds, clone: RAFL22-22-N08 Length = 922 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggacca 478 |||||||||||| ||||||| || |||||||||||||||||||||| ||||| Sbjct: 461 ttccaccaccacctccagtcttcaacgcagaggtgcatgtaggtcaagacca 410
>ref|XM_481306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2357 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 1848 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 1789 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 1788 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 1729 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 1728 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 1669 Query: 609 cag 611 ||| Sbjct: 1668 cag 1666 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 2007 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 1948 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 1947 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 1904
>ref|XM_481305.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2203 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 1764 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 1705 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 1704 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 1645 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 1644 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 1585 Query: 609 cag 611 ||| Sbjct: 1584 cag 1582 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 1923 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 1864 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 1863 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 1820
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 9095 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 9036 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 9035 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 8976 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 8975 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 8916 Query: 609 cag 611 ||| Sbjct: 8915 cag 8913 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 9254 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 9195 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 9194 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 9151
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 68950 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 68891 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 68890 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 68831 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 68830 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 68771 Query: 609 cag 611 ||| Sbjct: 68770 cag 68768 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 69109 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 69050 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 69049 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 69006
>dbj|AK102738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106D23, full insert sequence Length = 2358 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 1848 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 1789 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 1788 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 1729 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 1728 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 1669 Query: 609 cag 611 ||| Sbjct: 1668 cag 1666 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 2007 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 1948 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 1947 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 1904
>dbj|AK101928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072C14, full insert sequence Length = 2203 Score = 69.9 bits (35), Expect = 1e-08 Identities = 146/183 (79%) Strand = Plus / Minus Query: 429 ccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggaccagggagacctc 488 |||||||||| |||||||||| |||||||| ||||||||| || |||| || ||||| Sbjct: 1764 ccaccaccacctccagtcctccacgcagagccccatgtaggtgagcaccaccgacacctc 1705 Query: 489 ggcgcagacgatgaccaggagcagcatcacgatgaagaggaacccgaagacgtagtacac 548 | |||| ||| ||||| ||| |||||| | | ||||||||||| ||||||||||| Sbjct: 1704 gccgcacacggccaccagcagcgccatcaccaccagcaggaacccgaacacgtagtacac 1645 Query: 549 gcggcccatccagatgcttgacatgatgaagaagagctcgatgaacagggtgccgaaggg 608 | |||| ||| | ||| ||||||||||| | |||||||||||||| || ||||| || Sbjct: 1644 cctccccagccacaggctcgacatgatgaacagcagctcgatgaacagcgtcccgaacgg 1585 Query: 609 cag 611 ||| Sbjct: 1584 cag 1582 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 270 gccggtggccagcatgatggcgatgaccatgaagagcgagtagccgaggtagagggtcgc 329 ||||||||| ||||||| ||||| |||||| ||||||||||||| |||||| | || Sbjct: 1923 gccggtggcgagcatgacggcgagcgccatgagcagcgagtagccgacgtagagcgcggc 1864 Query: 330 cgacaccggcccgcttaggctcttgaggtcgaacaccaggtagt 373 || ||||| ||||| ||||| | |||||||| || ||||||| Sbjct: 1863 ggagaccgggccgctgaggctgtgcaggtcgaagacgaggtagt 1820
>dbj|AK175992.1| Arabidopsis thaliana mRNA for putative protein, partial cds, clone: RAFL22-69-A01 Length = 1126 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggtcaggacca 478 |||||||||||| ||||||| || |||||||||| ||||||||||| ||||| Sbjct: 765 ttccaccaccacctccagtcttcaacgcagaggttcatgtaggtcaagacca 714
>ref|XM_514572.1| PREDICTED: Pan troglodytes similar to Transmembrane 9 superfamily protein member 4 (LOC458164), mRNA Length = 2691 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 2325 gatgaagaagagctcgatgaacatggcgccgaagggca 2288
>gb|BC022850.2| Homo sapiens transmembrane 9 superfamily protein member 4, mRNA (cDNA clone MGC:16564 IMAGE:4098679), complete cds Length = 3752 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1556 gatgaagaagagctcgatgaacatggcgccgaagggca 1519
>ref|NM_014742.2| Homo sapiens transmembrane 9 superfamily protein member 4 (TM9SF4), mRNA Length = 3752 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1556 gatgaagaagagctcgatgaacatggcgccgaagggca 1519
>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21 Contains the 3' end of the HCK for hemopoietic cell kinase, the gene for novel protein (KIAA0255), the RPL24P1 gene for ribosomal protein L24 pseudogene 1 and two CpG Islands, complete sequence Length = 111694 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 83068 gatgaagaagagctcgatgaacatggcgccgaagggca 83031
>gb|BC021107.1| Homo sapiens transmembrane 9 superfamily protein member 4, mRNA (cDNA clone MGC:31858 IMAGE:4896167), complete cds Length = 2068 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1574 gatgaagaagagctcgatgaacatggcgccgaagggca 1537
>emb|CR857760.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0429 (from clone DKFZp469H0429) Length = 3765 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1570 gatgaagaagagctcgatgaacatggcgccgaagggca 1533
>dbj|AK126534.1| Homo sapiens cDNA FLJ44570 fis, clone UTERU3011063, highly similar to Transmembrane 9 superfamily protein member 4 Length = 3428 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1248 gatgaagaagagctcgatgaacatggcgccgaagggca 1211
>emb|CR611710.1| full-length cDNA clone CS0DC015YK21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1607 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1167 gatgaagaagagctcgatgaacatggcgccgaagggca 1130
>emb|CR610143.1| full-length cDNA clone CS0DI087YN17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1184 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 771 gatgaagaagagctcgatgaacatggcgccgaagggca 734
>dbj|D87444.1| Homo sapiens mRNA for KIAA0255 gene, partial cds Length = 4028 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1852 gatgaagaagagctcgatgaacatggcgccgaagggca 1815
>gb|BC005173.2| Homo sapiens cDNA clone IMAGE:3507918, containing frame-shift errors Length = 3775 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggca 610 ||||||||||||||||||||||| || ||||||||||| Sbjct: 1551 gatgaagaagagctcgatgaacatggcgccgaagggca 1514
>gb|AY107658.1| Zea mays PCO112223 mRNA sequence Length = 851 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 427 ttccaccaccacttccagtcctcgacgcagaggtgcatgtaggt 470 |||||||||||| |||||||||| ||||||| ||||||||||| Sbjct: 403 ttccaccaccacctccagtcctccgcgcagagatgcatgtaggt 360 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 256 atgaagaagagctcgatgaa 237
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggcag 611 ||||||||||||||||||||||| | |||||||||||| Sbjct: 26250599 gatgaagaagagctcgatgaacaccgcgccgaagggcag 26250561 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 21608073 atgaagaagagctcgatgaa 21608092
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggcag 611 ||||||||||||||||||||||| | |||||||||||| Sbjct: 115139 gatgaagaagagctcgatgaacaccgcgccgaagggcag 115101
>dbj|AK066545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069A19, full insert sequence Length = 2291 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggcag 611 ||||||||||||||||||||||| | |||||||||||| Sbjct: 1664 gatgaagaagagctcgatgaacaccgcgccgaagggcag 1626
>gb|BT024118.1| Zea mays clone EL01N0506E07 mRNA sequence Length = 1893 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggcag 611 ||||||||||||||||||||||| | |||||||||||| Sbjct: 1238 gatgaagaagagctcgatgaacactgcgccgaagggcag 1200
>ref|XM_534381.2| PREDICTED: Canis familiaris similar to Transmembrane 9 superfamily protein member 4 (LOC477191), mRNA Length = 2132 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaacagggtgccgaagggcag 611 ||||||||| ||||||||||||| || ||||||||||| Sbjct: 1563 gatgaagaaaagctcgatgaacatggcaccgaagggcag 1525
>emb|CR726517.2|CNS0GNIZ Tetraodon nigroviridis full-length cDNA Length = 2288 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaaca 595 ||||||||||||||||||||||| Sbjct: 1516 gatgaagaagagctcgatgaaca 1494
>ref|NM_104386.2| Arabidopsis thaliana transporter AT1G55130 mRNA, complete cds Length = 2041 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 cacgatgaagaggaacccgaagacgtagta 545 ||||||||||||||| ||||||| |||||| Sbjct: 1605 cacgatgaagaggaatccgaagatgtagta 1576 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 1548 gatgaagaagagctcgatgaa 1528
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 cggtggccagcatgatggcgat 293 |||||||||||||||||||||| Sbjct: 113068 cggtggccagcatgatggcgat 113089 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 caccaccacttccagtcctc 449 |||||||||||||||||||| Sbjct: 280536 caccaccacttccagtcctc 280517
>gb|AC138065.25| Pan troglodytes clone rp43-11g4, complete sequence Length = 173247 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 500 tgaccaggagcagcatcacgatgaag 525 |||||||||||||||||| ||||||| Sbjct: 79652 tgaccaggagcagcatcaagatgaag 79677
>gb|AC000029.17| Homo sapiens Chromosome 22q11.2 BAC Clone 865e9 In GNAZ-BCR Region, complete sequence Length = 142979 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 500 tgaccaggagcagcatcacgatgaag 525 |||||||||||||||||| ||||||| Sbjct: 13818 tgaccaggagcagcatcaagatgaag 13793
>dbj|AB200968.1| Paralichthys olivaceus GCSF gene for granulocyte colony-stimulating factor, complete cds Length = 3514 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 517 acgatgaagaggaacccgaaga 538 |||||||||||||||||||||| Sbjct: 1964 acgatgaagaggaacccgaaga 1943
>gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N22 genomic sequence, complete sequence Length = 44540 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 cacgatgaagaggaacccgaagacgtagta 545 ||||||||||||||| ||||||| |||||| Sbjct: 31895 cacgatgaagaggaatccgaagatgtagta 31866 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 31838 gatgaagaagagctcgatgaa 31818
>gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131209 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 500 tgaccaggagcagcatcacgatgaag 525 |||||||||||||||||| ||||||| Sbjct: 89238 tgaccaggagcagcatcaagatgaag 89213
>gb|BT002777.1| Arabidopsis thaliana clone RAFL15-05-K15 (R20179) putative endomembrane protein 70 (At1g55130) mRNA, partial cds Length = 1121 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 cacgatgaagaggaacccgaagacgtagta 545 ||||||||||||||| ||||||| |||||| Sbjct: 669 cacgatgaagaggaatccgaagatgtagta 640 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 612 gatgaagaagagctcgatgaa 592
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 560 agatgcttgacatgatgaagaa 581 |||||||||||||||||||||| Sbjct: 1869286 agatgcttgacatgatgaagaa 1869307
>dbj|AP000362.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone N75A12 Length = 39299 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 500 tgaccaggagcagcatcacgatgaag 525 |||||||||||||||||| ||||||| Sbjct: 31698 tgaccaggagcagcatcaagatgaag 31673
>ref|NM_112228.1| Arabidopsis thaliana transporter AT3G13772 mRNA, complete cds Length = 2105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 1560 gatgaagaagagctcgatgaa 1540
>ref|NM_122419.2| Arabidopsis thaliana transporter AT5G25100 mRNA, complete cds Length = 2303 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 1666 gatgaagaagagctcgatgaa 1646
>ref|NM_121122.2| Arabidopsis thaliana transporter AT5G10840 mRNA, complete cds Length = 1984 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 1618 gatgaagaagagctcgatgaa 1598
>ref|NM_121121.2| Arabidopsis thaliana unknown protein AT5G10830 mRNA, complete cds Length = 1649 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 1458 gatgaagaagagctcgatgaa 1478
>gb|AC005964.1| Arabidopsis thaliana chromosome V map 60.5 cM, complete sequence Length = 91916 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 52428 gatgaagaagagctcgatgaa 52448
>gb|AF360135.1| Arabidopsis thaliana putative multispanning membrane protein (At5g25100) mRNA, complete cds Length = 2296 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 1666 gatgaagaagagctcgatgaa 1646
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 aggaagatgtagatggccacg 405 ||||||||||||||||||||| Sbjct: 267467 aggaagatgtagatggccacg 267487
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project) Length = 98473 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 32904 gatgaagaagagctcgatgaa 32924
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 66931 gatgaagaagagctcgatgaa 66951
>gb|AY103820.1| Zea mays PCO138896 mRNA sequence Length = 965 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 gatgaagaagagctcgatgaa 593 ||||||||||||||||||||| Sbjct: 377 gatgaagaagagctcgatgaa 357
>ref|NM_127978.2| Arabidopsis thaliana transporter AT2G24170 mRNA, complete cds Length = 2169 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 1639 atgaagaagagctcgatgaa 1620
>ref|XM_633336.1| Dictyostelium discoideum hypothetical protein (DDB0186216), partial mRNA Length = 4923 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcacctctcaattcaatgat 182 |||||||||||||||||||| Sbjct: 4478 tcacctctcaattcaatgat 4497
>gb|AF196335.1| Uncultured sulphate-reducing bacterium clone APS3 adenylylsulphate reductase alpha-subunit (apsA) gene, partial cds Length = 374 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 103 ccaggagcagcttcacgatgaaga 80
>gb|AF196337.1| Uncultured sulphate-reducing bacterium clone APS6 adenylylsulphate reductase alpha-subunit (apsA) gene, partial cds Length = 374 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 103 ccaggagcagcttcacgatgaaga 80
>gb|AF196338.1| Uncultured sulphate-reducing bacterium clone APS7 adenylylsulphate reductase alpha-subunit (apsA) gene, partial cds Length = 372 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 100 ccaggagcagcttcacgatgaaga 77
>gb|AY744465.1| Desulfovibrio alkalitolerans adenosine-5'-phosphosulfate reductase alpha subunit (aspA) gene, partial cds Length = 882 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 346 ccaggagcagcttcacgatgaaga 323
>gb|AY749040.1| Desulfovibrio aerotolerans adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 879 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 340 ccaggagcagcttcacgatgaaga 317
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 gaacccgaagacgtagtacacgcggccc 555 |||||||||||||||| |||| |||||| Sbjct: 47758 gaacccgaagacgtaggacacccggccc 47731
>gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosome 3, complete sequence Length = 228648 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 454 cagaggtgcatgtaggtcaggaccagggagac 485 |||||||||||| | |||||||||||| |||| Sbjct: 134398 cagaggtgcatgaatgtcaggaccaggaagac 134367
>ref|XM_503446.1| Yarrowia lipolytica CLIB122, YALI0E02134g predicted mRNA Length = 1032 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ccagatgcttgacatgatga 577 |||||||||||||||||||| Sbjct: 510 ccagatgcttgacatgatga 529
>gb|AY091067.1| Arabidopsis thaliana putative multispanning membrane protein (At2g24170) mRNA, complete cds Length = 2138 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 1639 atgaagaagagctcgatgaa 1620
>gb|AE008720.1| Salmonella typhimurium LT2, section 28 of 220 of the complete genome Length = 23217 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 agaatgacttccaccaccac 438 |||||||||||||||||||| Sbjct: 3269 agaatgacttccaccaccac 3250
>emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 3/20 Length = 240050 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 agaatgacttccaccaccac 438 |||||||||||||||||||| Sbjct: 53353 agaatgacttccaccaccac 53334
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 gaacccgaagacgtagtacacgcggccc 555 |||||||||||||||| |||| |||||| Sbjct: 31353 gaacccgaagacgtaggacacccggccc 31326
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cggtggccagcatgatggcg 291 |||||||||||||||||||| Sbjct: 294126 cggtggccagcatgatggcg 294145
>ref|NM_137443.2| Drosophila melanogaster CG10912-RA (CG10912), mRNA Length = 905 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cggtggccagcatgatggcgatga 295 |||||||||||| ||||||||||| Sbjct: 67 cggtggccagcaggatggcgatga 44
>gb|AC005967.3| Arabidopsis thaliana chromosome 2 clone F27D4 map CIC06C07, complete sequence Length = 96046 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 33639 atgaagaagagctcgatgaa 33658
>gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, complete sequence Length = 144192 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 atgatggcgatgaccatgaa 302 |||||||||||||||||||| Sbjct: 118189 atgatggcgatgaccatgaa 118208
>gb|AF418143.1|AF418143 Desulfovibrio burkinensis DSM 6830 adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 938 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 379 ccaggagcagcttcacgatgaaga 356
>gb|AF418140.1|AF418140 Desulfovibrio africanus DSM 2603 adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 929 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 370 ccaggagcagcttcacgatgaaga 347
>gb|AF418125.1|AF418125 Desulfohalobium retbaense DSM 5692 adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 887 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 349 ccaggagcagcttcacgatgaaga 326
>gb|AF418109.1|AF418109 Desulfovibrio fructosovorans DSM 3604 adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 906 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ccaggagcagcatcacgatgaaga 526 ||||||||||| |||||||||||| Sbjct: 367 ccaggagcagcttcacgatgaaga 344
>gb|AY069060.1| Drosophila melanogaster GH07575 full length cDNA Length = 903 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cggtggccagcatgatggcgatga 295 |||||||||||| ||||||||||| Sbjct: 43 cggtggccagcaggatggcgatga 20
>gb|AC099039.1| Drosophila melanogaster, chromosome 2R, region 55A-55B, BAC clone BACR33K09, complete sequence Length = 162492 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cggtggccagcatgatggcgatga 295 |||||||||||| ||||||||||| Sbjct: 123602 cggtggccagcaggatggcgatga 123579
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 agaatgacttccaccaccac 438 |||||||||||||||||||| Sbjct: 2294115 agaatgacttccaccaccac 2294134
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 165257 atgaagaagagctcgatgaa 165276
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062E01 Length = 161804 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 7004 atgaagaagagctcgatgaa 7023
>dbj|AK071892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059K02, full insert sequence Length = 1416 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 atgaagaagagctcgatgaa 593 |||||||||||||||||||| Sbjct: 779 atgaagaagagctcgatgaa 760
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 agaatgacttccaccaccac 438 |||||||||||||||||||| Sbjct: 2408748 agaatgacttccaccaccac 2408767
>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete sequence Length = 254899 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 cggtggccagcatgatggcgatga 295 |||||||||||| ||||||||||| Sbjct: 254743 cggtggccagcaggatggcgatga 254766
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 agaatgacttccaccaccac 438 |||||||||||||||||||| Sbjct: 623495 agaatgacttccaccaccac 623476
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 atgactacaaacttttcaat 142 |||||||||||||||||||| Sbjct: 1858356 atgactacaaacttttcaat 1858337
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gatggcgatgaccatgaaga 304 |||||||||||||||||||| Sbjct: 759350 gatggcgatgaccatgaaga 759331
>gb|AC004293.1|AC004293 Drosophila melanogaster DNA sequence (P1 DS08109 (D176)), complete sequence Length = 79559 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 cggtggccagcatgatggcgatga 295 |||||||||||| ||||||||||| Sbjct: 60201 cggtggccagcaggatggcgatga 60224
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ccagatgcttgacatgatga 577 |||||||||||||||||||| Sbjct: 229955 ccagatgcttgacatgatga 229974 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,563,014 Number of Sequences: 3902068 Number of extensions: 4563014 Number of successful extensions: 81814 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81109 Number of HSP's gapped (non-prelim): 695 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
