ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017074.1| Zea mays clone EL01N0359G01.c mRNA sequence 50 0.009
2gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome... 48 0.034
3gb|AC158141.8| Mus musculus chromosome 5, clone RP23-281M20, com... 44 0.53
4gb|M98350.1|XXXPKLHO Unknown bacterial sp. pyruvate kinase-like ... 44 0.53
5emb|AJ512946.1|LDE512946 Lactobacillus delbrueckii subsp. lactis... 44 0.53
6dbj|AB234906.1| Verbena x hybrida mRNA for anthocyanidin synthas... 44 0.53
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
8dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
9gb|L48487.2|LBAPRTB Lactobacillus delbrueckii proteinase precurs... 44 0.53
10gb|DQ114966.1| Moneuplotes crassus clone pEC17 unknown sequence;... 44 0.53
11gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 42 2.1
12gb|AC162869.3| Mus musculus chromosome 1, clone RP24-309N24, com... 42 2.1
13gb|AF007261.1| Reclinomonas americana mitochondrion, complete ge... 42 2.1
14dbj|AK054685.1| Homo sapiens cDNA FLJ30123 fis, clone BRACE1000092 42 2.1
15gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, comp... 42 2.1
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
17dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
18gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 42 2.1
19dbj|AB025261.1| Sus scrofa mRNA for myosin heavy chain 2b, compl... 42 2.1
20ref|NM_203195.1| Arabidopsis thaliana transcription factor AT5G5... 40 8.3
21ref|NM_124566.3| Arabidopsis thaliana transcription factor AT5G5... 40 8.3
22gb|BT017083.1| Zea mays clone EL01N0360E05.c mRNA sequence 40 8.3
23gb|BC082537.1| Mus musculus RIKEN cDNA 2900042E01 gene, mRNA (cD... 40 8.3
24ref|NM_175189.4| Mus musculus RIKEN cDNA 2900042E01 gene (290004... 40 8.3
25gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 8.3
26gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 8.3
27gb|AC138284.9| Mus musculus chromosome 9, clone RP23-356D13, com... 40 8.3
28gb|AY141220.1| Arabidopsis thaliana MADS-box protein AGL71 mRNA,... 40 8.3
29emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, B... 40 8.3
30emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BA... 40 8.3
31gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, com... 40 8.3
32dbj|AK138438.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 8.3
33dbj|AK158265.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 8.3
34emb|BX649555.9| Zebrafish DNA sequence from clone CH211-117C13 i... 40 8.3
35dbj|AK013637.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.3
36gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, compl... 40 8.3
37dbj|AK081154.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 8.3
38gb|AC080094.5| Homo sapiens BAC clone RP11-1007E2 from 2, comple... 40 8.3
39gb|AC155241.2| Mus musculus BAC clone RP24-485P18 from chromosom... 40 8.3
40gb|AC010146.13| Homo sapiens BAC clone RP11-355I13 from 2, compl... 40 8.3
41dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 8.3
42gb|AC021068.17|AC021068 Homo sapiens 3 BAC RP11-48O22 (Roswell P... 40 8.3
43gb|AC016138.8| Homo sapiens 3 BAC RP11-91B3 (Roswell Park Cancer... 40 8.3
44dbj|AB025623.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.3
45gb|DQ141335.1| Danio rerio subclone lambdaZf13 II-FBPL gene, par... 40 8.3
46gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 8.3
47gb|AC130211.3| Mus musculus BAC clone RP24-261D2 from 1, complet... 40 8.3
48gb|AC125522.4| Mus musculus BAC clone RP24-363I16 from 1, comple... 40 8.3
49gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromos... 40 8.3
50dbj|AP006359.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.3
51dbj|AP006357.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.3 
>gb|BT017074.1| Zea mays clone EL01N0359G01.c mRNA sequence
          Length = 1307

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 391 tcaatttccatcttcagctcgtcgtggtatttcttctcttgcttctccaactccctcttc 450
           ||||||||| ||||||| || |||  ||||| ||||||| || |||||| || |||||||
Sbjct: 772 tcaatttccttcttcagttcatcgatgtattgcttctctagcatctccagcttcctcttc 713

                    
Query: 451 tttttagca 459
           |||| ||||
Sbjct: 712 ttttcagca 704
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>gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome 15, complete sequence
          Length = 260402

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 375   agagaaagtggttccctcaatttc 398
             ||||||||||||||||||||||||
Sbjct: 95804 agagaaagtggttccctcaatttc 95781
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>gb|AC158141.8| Mus musculus chromosome 5, clone RP23-281M20, complete sequence
          Length = 220396

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 339   atcaggtgcactatcagccttc 360
             ||||||||||||||||||||||
Sbjct: 86876 atcaggtgcactatcagccttc 86897
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>gb|M98350.1|XXXPKLHO Unknown bacterial sp. pyruvate kinase-like protein (PKL) gene, 3'
           end and hydrophobic protein (HI) gene, 5' end
          Length = 2082

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 277 atgtcatcagcatccttttcag 298
           ||||||||||||||||||||||
Sbjct: 290 atgtcatcagcatccttttcag 269
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>emb|AJ512946.1|LDE512946 Lactobacillus delbrueckii subsp. lactis prtB gene for proteinase B
          Length = 6674

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 283  tcagcatccttttcagcttgttcaac 308
            ||||||||||||||||| ||||||||
Sbjct: 5557 tcagcatccttttcagcctgttcaac 5532
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>dbj|AB234906.1| Verbena x hybrida mRNA for anthocyanidin synthase, complete cds,
           cultivar: Tapien Pink
          Length = 1375

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 401 tcttcagctcgtcgtggtatttcttc 426
           ||||||||||||||||| ||||||||
Sbjct: 289 tcttcagctcgtcgtggcatttcttc 264
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 422     tcttctcttgcttctccaactc 443
               ||||||||||||||||||||||
Sbjct: 8944928 tcttctcttgcttctccaactc 8944949
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>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1057_E05
          Length = 103229

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 422   tcttctcttgcttctccaactc 443
             ||||||||||||||||||||||
Sbjct: 71085 tcttctcttgcttctccaactc 71106
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>gb|L48487.2|LBAPRTB Lactobacillus delbrueckii proteinase precursor (prtB) gene, complete
            cds
          Length = 8775

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 283  tcagcatccttttcagcttgttcaac 308
            ||||||||||||||||| ||||||||
Sbjct: 7664 tcagcatccttttcagcctgttcaac 7639
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>gb|DQ114966.1| Moneuplotes crassus clone pEC17 unknown sequence; macronuclear
          Length = 3025

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 421  ttcttctcttgcttctccaact 442
            ||||||||||||||||||||||
Sbjct: 1071 ttcttctcttgcttctccaact 1050
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 293    tttcagcttgttcaacagctg 313
              |||||||||||||||||||||
Sbjct: 813734 tttcagcttgttcaacagctg 813754
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>gb|AC162869.3| Mus musculus chromosome 1, clone RP24-309N24, complete sequence
          Length = 169330

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    aatgcaaaaacaacataaata 54
             |||||||||||||||||||||
Sbjct: 95607 aatgcaaaaacaacataaata 95627
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>gb|AF007261.1| Reclinomonas americana mitochondrion, complete genome
          Length = 69034

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    atccagtcaatgcaaaaacaa 46
             |||||||||||||||||||||
Sbjct: 60796 atccagtcaatgcaaaaacaa 60776
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>dbj|AK054685.1| Homo sapiens cDNA FLJ30123 fis, clone BRACE1000092
          Length = 2258

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 422 tcttctcttgcttctccaactccct 446
           ||||||||||| |||||||||||||
Sbjct: 616 tcttctcttgcctctccaactccct 592
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>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence
          Length = 186403

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 422    tcttctcttgcttctccaactccct 446
              ||||||||||| |||||||||||||
Sbjct: 102897 tcttctcttgcctctccaactccct 102873
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 422      tcttctcttgcttctccaact 442
                |||||||||||||||||||||
Sbjct: 15396475 tcttctcttgcttctccaact 15396455
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   tcttctcttgcttctccaact 442
             |||||||||||||||||||||
Sbjct: 63990 tcttctcttgcttctccaact 63970
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 293    tttcagcttgttcaacagctg 313
              |||||||||||||||||||||
Sbjct: 632781 tttcagcttgttcaacagctg 632801
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>dbj|AB025261.1| Sus scrofa mRNA for myosin heavy chain 2b, complete cds
          Length = 5929

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  tcaatttccatcttcagctcg 411
            |||||||||||||||||||||
Sbjct: 3745 tcaatttccatcttcagctcg 3725
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>ref|NM_203195.1| Arabidopsis thaliana transcription factor AT5G51870 transcript
           variant AT5G51870.2 mRNA, complete cds
          Length = 585

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tcaatttccatcttcagctc 410
           ||||||||||||||||||||
Sbjct: 287 tcaatttccatcttcagctc 268
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>ref|NM_124566.3| Arabidopsis thaliana transcription factor AT5G51870 transcript
           variant AT5G51870.1 mRNA, complete cds
          Length = 624

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tcaatttccatcttcagctc 410
           ||||||||||||||||||||
Sbjct: 287 tcaatttccatcttcagctc 268
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>gb|BT017083.1| Zea mays clone EL01N0360E05.c mRNA sequence
          Length = 1551

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cagccgccttcttcctttgc 183
           ||||||||||||||||||||
Sbjct: 584 cagccgccttcttcctttgc 603
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>gb|BC082537.1| Mus musculus RIKEN cDNA 2900042E01 gene, mRNA (cDNA clone
           IMAGE:5685535), partial cds
          Length = 3027

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 429 ttgcttctccaactccctcttctt 452
           |||||||||||||| |||||||||
Sbjct: 819 ttgcttctccaacttcctcttctt 796
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>ref|NM_175189.4| Mus musculus RIKEN cDNA 2900042E01 gene (2900042E01Rik), mRNA
          Length = 3103

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 429 ttgcttctccaactccctcttctt 452
           |||||||||||||| |||||||||
Sbjct: 905 ttgcttctccaacttcctcttctt 882
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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cagtcaatgcaaaaacaaca 48
             ||||||||||||||||||||
Sbjct: 93309 cagtcaatgcaaaaacaaca 93328
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>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cagtcaatgcaaaaacaaca 48
             ||||||||||||||||||||
Sbjct: 86568 cagtcaatgcaaaaacaaca 86587
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>gb|AC138284.9| Mus musculus chromosome 9, clone RP23-356D13, complete sequence
          Length = 220266

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 429    ttgcttctccaactccctcttctt 452
              |||||||||||||| |||||||||
Sbjct: 169166 ttgcttctccaacttcctcttctt 169143
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>gb|AY141220.1| Arabidopsis thaliana MADS-box protein AGL71 mRNA, complete cds
          Length = 624

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tcaatttccatcttcagctc 410
           ||||||||||||||||||||
Sbjct: 287 tcaatttccatcttcagctc 268
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>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21
          Length = 99492

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    atgcaaaaacaacataaata 54
             ||||||||||||||||||||
Sbjct: 98801 atgcaaaaacaacataaata 98782
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>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19
          Length = 101539

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   atgcaaaaacaacataaata 54
            ||||||||||||||||||||
Sbjct: 6655 atgcaaaaacaacataaata 6636
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>gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, complete sequence
          Length = 178965

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   cttgttcaacagctgcctgg 318
             ||||||||||||||||||||
Sbjct: 72274 cttgttcaacagctgcctgg 72255
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>dbj|AK138438.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230108E16 product:hypothetical
           Immunoglobulin-like containing protein, full insert
           sequence
          Length = 2614

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 429 ttgcttctccaactccctcttctt 452
           |||||||||||||| |||||||||
Sbjct: 429 ttgcttctccaacttcctcttctt 406
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>dbj|AK158265.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930049D15 product:hypothetical
            Immunoglobulin-like/Immunoglobulin C-2
            type/Immunoglobulin subtype/Ig-like domain profile
            containing protein, full insert sequence
          Length = 2445

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 429  ttgcttctccaactccctcttctt 452
            |||||||||||||| |||||||||
Sbjct: 1143 ttgcttctccaacttcctcttctt 1120
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>emb|BX649555.9| Zebrafish DNA sequence from clone CH211-117C13 in linkage group 16,
              complete sequence
          Length = 163314

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    aatgtcatcagcatcctttt 295
              ||||||||||||||||||||
Sbjct: 139675 aatgtcatcagcatcctttt 139694
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>dbj|AK013637.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900042E01 product:hypothetical
           Immunoglobulin and major histocompatibility complex
           domain/Immunoglobulin C-2 type/Immunoglobulin subtype
           containing protein, full insert sequence
          Length = 1613

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 429 ttgcttctccaactccctcttctt 452
           |||||||||||||| |||||||||
Sbjct: 905 ttgcttctccaacttcctcttctt 882
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>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence
          Length = 141513

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   cttctccaactccctcttct 451
             ||||||||||||||||||||
Sbjct: 90764 cttctccaactccctcttct 90783
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>dbj|AK081154.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930093P06 product:hypothetical
           Immunoglobulin-like/Immunoglobulin C-2
           type/Immunoglobulin subtype/Ig-like domain profile
           containing protein, full insert sequence
          Length = 1445

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 429 ttgcttctccaactccctcttctt 452
           |||||||||||||| |||||||||
Sbjct: 821 ttgcttctccaacttcctcttctt 798
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>gb|AC080094.5| Homo sapiens BAC clone RP11-1007E2 from 2, complete sequence
          Length = 134001

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caatgcaaaaacaacataaa 52
             ||||||||||||||||||||
Sbjct: 78854 caatgcaaaaacaacataaa 78835
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>gb|AC155241.2| Mus musculus BAC clone RP24-485P18 from chromosome 12, complete
             sequence
          Length = 144320

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   tatttcttctcttgcttctc 437
             ||||||||||||||||||||
Sbjct: 86061 tatttcttctcttgcttctc 86080
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>gb|AC010146.13| Homo sapiens BAC clone RP11-355I13 from 2, complete sequence
          Length = 211748

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   aaggcctctcttcttcctgg 259
             ||||||||||||||||||||
Sbjct: 74692 aaggcctctcttcttcctgg 74673
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    ttgagcagctcgactttgct 203
              ||||||||||||||||||||
Sbjct: 534428 ttgagcagctcgactttgct 534409
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>gb|AC021068.17|AC021068 Homo sapiens 3 BAC RP11-48O22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159259

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 434   tctccaactccctcttctttttag 457
             |||||||||||||| |||||||||
Sbjct: 73763 tctccaactccctcatctttttag 73740
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>gb|AC016138.8| Homo sapiens 3 BAC RP11-91B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179680

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   cccagatcttcatcacctgg 518
             ||||||||||||||||||||
Sbjct: 84472 cccagatcttcatcacctgg 84491
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>dbj|AB025623.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJM18
          Length = 16203

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  tcaatttccatcttcagctc 410
            ||||||||||||||||||||
Sbjct: 4217 tcaatttccatcttcagctc 4236
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>gb|DQ141335.1| Danio rerio subclone lambdaZf13 II-FBPL gene, partial cds
          Length = 9567

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  ttcttcctggaaacgacaga 269
            ||||||||||||||||||||
Sbjct: 2516 ttcttcctggaaacgacaga 2497
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cagtcaatgcaaaaacaaca 48
             ||||||||||||||||||||
Sbjct: 94474 cagtcaatgcaaaaacaaca 94493
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>gb|AC130211.3| Mus musculus BAC clone RP24-261D2 from 1, complete sequence
          Length = 182051

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    tctcttcttcctggaaacga 265
              ||||||||||||||||||||
Sbjct: 152566 tctcttcttcctggaaacga 152547
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>gb|AC125522.4| Mus musculus BAC clone RP24-363I16 from 1, complete sequence
          Length = 100480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  tctcttcttcctggaaacga 265
            ||||||||||||||||||||
Sbjct: 7786 tctcttcttcctggaaacga 7767
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>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete
              sequence
          Length = 158903

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    tcagcttgttcaacagctgc 314
              ||||||||||||||||||||
Sbjct: 101672 tcagcttgttcaacagctgc 101691
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>dbj|AP006359.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36C13, TM0100c,
             complete sequence
          Length = 25407

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tttcagcttgttcaacagct 312
             ||||||||||||||||||||
Sbjct: 24951 tttcagcttgttcaacagct 24932
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>dbj|AP006357.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36C13, TM0100a,
            complete sequence
          Length = 79575

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  tttcagcttgttcaacagct 312
            ||||||||||||||||||||
Sbjct: 6660 tttcagcttgttcaacagct 6679


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,176,686
Number of Sequences: 3902068
Number of extensions: 6176686
Number of successful extensions: 123396
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123173
Number of HSP's gapped (non-prelim): 223
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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