ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3m02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463817.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
2dbj|AB110187.1| Oryza sativa (japonica cultivar-group) mRNA for ... 178 1e-41
3dbj|AK069014.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
5dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
6dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
7gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 70 1e-08
8gb|AY107636.1| Zea mays PCO064382 mRNA sequence 68 4e-08
9ref|XM_467400.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
10dbj|AK068408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
11gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence 46 0.14
12dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
13gb|AC012327.6|AC012327 Arabidopsis thaliana chromosome 3 BAC T14... 44 0.54
14gb|AC018660.1|AC018660 Genomic Sequence For Arabidopsis thaliana... 44 0.54
15gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
16gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, co... 42 2.2
17gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
18gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, co... 42 2.2
19gb|AF542394.1| Mus musculus Fps/Fes protein tyrosine kinase regi... 42 2.2
20emb|CR450778.7| Zebrafish DNA sequence from clone DKEY-14I6 in l... 42 2.2
21emb|CR394564.8| Zebrafish DNA sequence from clone DKEY-1K1 in li... 42 2.2
22gb|AY122086.1| Drosophila melanogaster GH02773 full insert cDNA 42 2.2
23gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswel... 42 2.2
24gb|AC093006.4| Homo sapiens 3 BAC RP11-394D14 (Roswell Park Canc... 42 2.2
25ref|NM_138199.2| Drosophila melanogaster Rhythmically expressed ... 42 2.2
26dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
27gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 ... 42 2.2
28gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 f... 42 2.2
29gb|AF230340.1|AF230340 Mus musculus nuclear RNA polymerase I sma... 42 2.2
30gb|AF173882.1|AF173882 Bos taurus N-type calcium channel alpha1B... 42 2.2
31ref|NM_174632.2| Bos taurus calcium channel, voltage-dependent, ... 42 2.2
32emb|BX677669.2| Zebrafish DNA sequence from clone DKEY-29I9 in l... 42 2.2
33emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 ... 42 2.2
34gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 ... 42 2.2
35gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 ... 42 2.2
36gb|U65492.1|DMU65492 Drosophila melanogaster Dreg-2 protein mRNA... 42 2.2
37gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 2.2
38emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, c... 42 2.2
39gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
40emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chrom... 42 2.2
41gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Ca... 40 8.5
42gb|AC167202.8| Mus musculus BAC RP24-243A15 (Roswell Park Cance... 40 8.5
43ref|XM_871105.1| PREDICTED: Bos taurus similar to Zinc finger pr... 40 8.5
44gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 8.5
45gb|AC124621.18| Mus musculus chromosome 1, clone RP23-393P20, co... 40 8.5
46gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, com... 40 8.5
47gb|AC166157.5| Mus musculus BAC clone RP24-193D9 from chromosome... 40 8.5
48gb|AC157545.12| Mus musculus chromosome 1, clone RP23-317L18, co... 40 8.5
49gb|AC163615.5| Mus musculus BAC clone RP23-104L12 from chromosom... 40 8.5
50gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome ... 40 8.5
51ref|XM_542214.2| PREDICTED: Canis familiaris similar to plastici... 40 8.5
52gb|AC102157.12| Mus musculus chromosome 1, clone RP23-393K4, com... 40 8.5
53gb|AC122386.3| Mus musculus BAC clone RP24-72H18 from chromosome... 40 8.5
54gb|AC124746.3| Mus musculus BAC clone RP23-242B22 from 15, compl... 40 8.5
55gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, compl... 40 8.5
56gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 40 8.5
57gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 8.5
58emb|AL450999.5| Human DNA sequence from clone RP11-152M6 on chro... 40 8.5
59gb|AC090246.9| Homo sapiens chromosome 18, clone RP11-699C17, co... 40 8.5
60gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, comp... 40 8.5
61gb|AC104018.3| Homo sapiens chromosome 8, clone RP11-354A14, com... 40 8.5
62gb|AC105227.6| Homo sapiens chromosome 18, clone RP11-1030E3, co... 40 8.5
63gb|AC171386.3| Sorex araneus clone SA_Ba-429O4, complete sequence 40 8.5
64gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, co... 40 8.5
65gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, comp... 40 8.5
66gb|AC174742.8| Mus musculus BAC RP24-258O12 (Roswell Park Cance... 40 8.5
67gb|DQ019314.1| Chlamydomonas reinhardtii soluble starch synthase... 40 8.5
68gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse... 40 8.5
69gb|AC146266.4| Pan troglodytes BAC clone RP43-30L11 from chromos... 40 8.5
70dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.5
71gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.5
72gb|AC079248.5| Homo sapiens BAC clone RP11-24J11 from 2, complet... 40 8.5
73gb|AC009263.6|AC009263 Homo sapiens clone RP11-377B19 from 7q31.... 40 8.5
74gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Can... 40 8.5
75gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 8.5
76gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 8.5
77gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple... 40 8.5
78gb|AC172027.4| Mus musculus BAC RP24-219P17 (Roswell Park Cance... 40 8.5
79gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer... 40 8.5 
>ref|XM_463817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2162

 Score =  178 bits (90), Expect = 1e-41
 Identities = 210/250 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  cgaacaggttctccagcgacttctgcttccggttccgggaccgccctgcctccttcagca 434
            |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 1782 cgaaaaggttttccagcgatttctgcttcctgttccgggaccgccctgcctccttcagaa 1723

                                                                        
Query: 435  gctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtgcccagcttctcct 494
            ||||||||||||    |||||||||||| || |||||||| || ||||| |||||||| |
Sbjct: 1722 gctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtgccgagcttctctt 1663

                                                                        
Query: 495  cacgcactttcagcacgtgctccaggatctcgatcgcgtcttccacccttcccatggcat 554
            | | ||| || || ||||| ||||| || || || ||||| || ||||| ||||| ||||
Sbjct: 1662 ccctcaccttaagtacgtgttccagtatttcaatggcgtcctcaaccctgcccatagcat 1603

                                                                        
Query: 555  catagatcgcagccaggttgctgtacacaccaagagtatccggatgagaggcgccacact 614
            | ||||| |||||||  || ||||| || || |||||||| ||||||||||| |||||||
Sbjct: 1602 cgtagattgcagccaaattactgtagacgccgagagtatctggatgagaggcaccacact 1543

                      
Query: 615  cctgctctag 624
            |||| |||||
Sbjct: 1542 cctgttctag 1533
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>dbj|AB110187.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, partial cds, clone: 15FPR003
          Length = 1219

 Score =  178 bits (90), Expect = 1e-41
 Identities = 210/250 (84%)
 Strand = Plus / Minus

                                                                       
Query: 375 cgaacaggttctccagcgacttctgcttccggttccgggaccgccctgcctccttcagca 434
           |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 864 cgaaaaggttttccagcgatttctgcttcctgttccgggaccgccctgcctccttcagaa 805

                                                                       
Query: 435 gctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtgcccagcttctcct 494
           ||||||||||||    |||||||||||| || |||||||| || ||||| |||||||| |
Sbjct: 804 gctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtgccgagcttctctt 745

                                                                       
Query: 495 cacgcactttcagcacgtgctccaggatctcgatcgcgtcttccacccttcccatggcat 554
           | | ||| || || ||||| ||||| || || || ||||| || ||||| ||||| ||||
Sbjct: 744 ccctcaccttaagtacgtgttccagtatttcaatggcgtcctcaaccctgcccatagcat 685

                                                                       
Query: 555 catagatcgcagccaggttgctgtacacaccaagagtatccggatgagaggcgccacact 614
           | ||||| |||||||  || ||||| || || |||||||| ||||||||||| |||||||
Sbjct: 684 cgtagattgcagccaaattactgtagacgccgagagtatctggatgagaggcaccacact 625

                     
Query: 615 cctgctctag 624
           |||| |||||
Sbjct: 624 cctgttctag 615
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>dbj|AK069014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170A02, full
            insert sequence
          Length = 2162

 Score =  178 bits (90), Expect = 1e-41
 Identities = 210/250 (84%)
 Strand = Plus / Minus

                                                                        
Query: 375  cgaacaggttctccagcgacttctgcttccggttccgggaccgccctgcctccttcagca 434
            |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 1781 cgaaaaggttttccagcgatttctgcttcctgttccgggaccgccctgcctccttcagaa 1722

                                                                        
Query: 435  gctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtgcccagcttctcct 494
            ||||||||||||    |||||||||||| || |||||||| || ||||| |||||||| |
Sbjct: 1721 gctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtgccgagcttctctt 1662

                                                                        
Query: 495  cacgcactttcagcacgtgctccaggatctcgatcgcgtcttccacccttcccatggcat 554
            | | ||| || || ||||| ||||| || || || ||||| || ||||| ||||| ||||
Sbjct: 1661 ccctcaccttaagtacgtgttccagtatttcaatggcgtcctcaaccctgcccatagcat 1602

                                                                        
Query: 555  catagatcgcagccaggttgctgtacacaccaagagtatccggatgagaggcgccacact 614
            | ||||| |||||||  || ||||| || || |||||||| ||||||||||| |||||||
Sbjct: 1601 cgtagattgcagccaaattactgtagacgccgagagtatctggatgagaggcaccacact 1542

                      
Query: 615  cctgctctag 624
            |||| |||||
Sbjct: 1541 cctgttctag 1532
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 7e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                          
Query: 375    cgaacaggttctccagcgacttctgcttccggttccgggaccgccctgcctccttcagca 434
              |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 535343 cgaaaaggttttccagcgatttctgcttcctgttccgggaccgccctgcctccttcagaa 535402

                                                                        
Query: 435    gctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtgcccagcttctc 492
              ||||||||||||    |||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 535403 gctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtgccgagcttctc 535460



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                          
Query: 545    cccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatgagag 604
              ||||| ||||| ||||| |||||||  || ||||| || || |||||||| |||||||||
Sbjct: 536321 cccatagcatcgtagattgcagccaaattactgtagacgccgagagtatctggatgagag 536380

                                  
Query: 605    gcgccacactcctgctctag 624
              || ||||||||||| |||||
Sbjct: 536381 gcaccacactcctgttctag 536400



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                            
Query: 422      gcctccttcagcagctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtg 481
                |||||||| || ||||| ||||||| |  ||| ||||| || ||||| ||||| || |||
Sbjct: 29306656 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 29306715

                           
Query: 482      cccagcttctc 492
                |||||||||||
Sbjct: 29306716 cccagcttctc 29306726



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                            
Query: 541      ccttcccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatg 600
                ||||||||||||||||||  |  |||| || ||||||||||| || | |||||| |||||
Sbjct: 29307743 ccttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatg 29307802

                 
Query: 601      a 601
                |
Sbjct: 29307803 a 29307803
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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score =  123 bits (62), Expect = 7e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                         
Query: 375   cgaacaggttctccagcgacttctgcttccggttccgggaccgccctgcctccttcagca 434
             |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 13396 cgaaaaggttttccagcgatttctgcttcctgttccgggaccgccctgcctccttcagaa 13455

                                                                       
Query: 435   gctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtgcccagcttctc 492
             ||||||||||||    |||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 13456 gctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtgccgagcttctc 13513



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 545   cccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatgagag 604
             ||||| ||||| ||||| |||||||  || ||||| || || |||||||| |||||||||
Sbjct: 14374 cccatagcatcgtagattgcagccaaattactgtagacgccgagagtatctggatgagag 14433

                                 
Query: 605   gcgccacactcctgctctag 624
             || ||||||||||| |||||
Sbjct: 14434 gcaccacactcctgttctag 14453
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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017C12
          Length = 135356

 Score =  123 bits (62), Expect = 7e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                          
Query: 375    cgaacaggttctccagcgacttctgcttccggttccgggaccgccctgcctccttcagca 434
              |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 131584 cgaaaaggttttccagcgatttctgcttcctgttccgggaccgccctgcctccttcagaa 131643

                                                                        
Query: 435    gctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtgcccagcttctc 492
              ||||||||||||    |||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 131644 gctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtgccgagcttctc 131701



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                          
Query: 545    cccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatgagag 604
              ||||| ||||| ||||| |||||||  || ||||| || || |||||||| |||||||||
Sbjct: 132562 cccatagcatcgtagattgcagccaaattactgtagacgccgagagtatctggatgagag 132621

                                  
Query: 605    gcgccacactcctgctctag 624
              || ||||||||||| |||||
Sbjct: 132622 gcaccacactcctgttctag 132641
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>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                         
Query: 422   gcctccttcagcagctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtg 481
             ||||||||||||| ||| || |||| |  ||||||||| || ||||| ||||||||||||
Sbjct: 41659 gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 41600

                                
Query: 482   cccagcttctcctcacgca 500
             || |||||||| |||||||
Sbjct: 41599 cctagcttctcttcacgca 41581
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>gb|AY107636.1| Zea mays PCO064382 mRNA sequence
          Length = 388

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 374 ccgaacaggttctccagcgacttctgcttccggt 407
           ||||||||||||||||||||||||||||||||||
Sbjct: 355 ccgaacaggttctccagcgacttctgcttccggt 388



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 288 cctcggctcagctcctg-aacccgaagttggtccacc 323
           |||| |||||||||||| ||||||||||||| |||||
Sbjct: 280 cctcagctcagctcctgnaacccgaagttggaccacc 316
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>ref|XM_467400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2712

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 144/181 (79%), Gaps = 2/181 (1%)
 Strand = Plus / Minus

                                                                        
Query: 422  gcctccttcagcagctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtg 481
            |||||||| || ||||| ||||||| |  ||| ||||| || ||||| ||||| || |||
Sbjct: 2256 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 2197

                                                                        
Query: 482  cccagcttctcctcacgcactttcagc-acgtgctccaggatctcgatcgcgtcttccac 540
            ||||||||||| || |||| |  || | || || |||| |||||| || || || |||| 
Sbjct: 2196 cccagcttctcttcgcgca-tcccaactacatgttccaagatctcaatggcctcatccag 2138

                                                                        
Query: 541  ccttcccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatg 600
            ||||||||||||||||||  |  |||| || ||||||||||| || | |||||| |||||
Sbjct: 2137 ccttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatg 2078

             
Query: 601  a 601
            |
Sbjct: 2077 a 2077
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>dbj|AK068408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151N03, full
            insert sequence
          Length = 2712

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 144/181 (79%), Gaps = 2/181 (1%)
 Strand = Plus / Minus

                                                                        
Query: 422  gcctccttcagcagctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtg 481
            |||||||| || ||||| ||||||| |  ||| ||||| || ||||| ||||| || |||
Sbjct: 2256 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 2197

                                                                        
Query: 482  cccagcttctcctcacgcactttcagc-acgtgctccaggatctcgatcgcgtcttccac 540
            ||||||||||| || |||| |  || | || || |||| |||||| || || || |||| 
Sbjct: 2196 cccagcttctcttcgcgca-tcccaactacatgttccaagatctcaatggcctcatccag 2138

                                                                        
Query: 541  ccttcccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatg 600
            ||||||||||||||||||  |  |||| || ||||||||||| || | |||||| |||||
Sbjct: 2137 ccttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatg 2078

             
Query: 601  a 601
            |
Sbjct: 2077 a 2077
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>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 422   gcctccttcagcagctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtg 481
             |||||||| || ||||| ||||||| |  ||| ||||| || ||||| ||||| || |||
Sbjct: 55975 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 55916

                        
Query: 482   cccagcttctc 492
             |||||||||||
Sbjct: 55915 cccagcttctc 55905



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 541   ccttcccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatg 600
             ||||||||||||||||||  |  |||| || ||||||||||| || | |||||| |||||
Sbjct: 54888 ccttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatg 54829

              
Query: 601   a 601
             |
Sbjct: 54828 a 54828
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>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0060O16
          Length = 164373

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                          
Query: 422    gcctccttcagcagctccgcaagccgcttcttctcgtcctccacgtccgggttcgccgtg 481
              |||||||| || ||||| ||||||| |  ||| ||||| || ||||| ||||| || |||
Sbjct: 104001 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 104060

                         
Query: 482    cccagcttctc 492
              |||||||||||
Sbjct: 104061 cccagcttctc 104071



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 541    ccttcccatggcatcatagatcgcagccaggttgctgtacacaccaagagtatccggatg 600
              ||||||||||||||||||  |  |||| || ||||||||||| || | |||||| |||||
Sbjct: 105088 ccttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatg 105147

               
Query: 601    a 601
              |
Sbjct: 105148 a 105148
to top
>gb|AC012327.6|AC012327 Arabidopsis thaliana chromosome 3 BAC T14A11 genomic sequence, complete
             sequence
          Length = 86585

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 63    aaaacaaaagaactcccaacat 84
             ||||||||||||||||||||||
Sbjct: 35233 aaaacaaaagaactcccaacat 35254
to top
>gb|AC018660.1|AC018660 Genomic Sequence For Arabidopsis thaliana Clone F11P10, Chromosome V,
             complete sequence
          Length = 105589

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 63    aaaacaaaagaactcccaacat 84
             ||||||||||||||||||||||
Sbjct: 69957 aaaacaaaagaactcccaacat 69936
to top
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12,
              complete sequence
          Length = 147801

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 449    ttcttctcgtcctccacgtcc 469
              |||||||||||||||||||||
Sbjct: 127619 ttcttctcgtcctccacgtcc 127599
to top
>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence
          Length = 228842

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 100    aagtacacagcaaccaagaca 120
              |||||||||||||||||||||
Sbjct: 198112 aagtacacagcaaccaagaca 198092
to top
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0062E06, complete sequence
          Length = 158842

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 449  ttcttctcgtcctccacgtcc 469
            |||||||||||||||||||||
Sbjct: 7532 ttcttctcgtcctccacgtcc 7512
to top
>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence
          Length = 219863

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    cctgcctccttcagcagctcc 439
              |||||||||||||||||||||
Sbjct: 159503 cctgcctccttcagcagctcc 159483
to top
>gb|AF542394.1| Mus musculus Fps/Fes protein tyrosine kinase region, complete
            sequence
          Length = 13758

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 419  cctgcctccttcagcagctcc 439
            |||||||||||||||||||||
Sbjct: 7055 cctgcctccttcagcagctcc 7075
to top
>emb|CR450778.7| Zebrafish DNA sequence from clone DKEY-14I6 in linkage group 8,
            complete sequence
          Length = 120755

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 5    tatatatattgcttaaatatc 25
            |||||||||||||||||||||
Sbjct: 1852 tatatatattgcttaaatatc 1872



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    tatatatattgcttaaatat 24
            ||||||||||||||||||||
Sbjct: 1801 tatatatattgcttaaatat 1782
to top
>emb|CR394564.8| Zebrafish DNA sequence from clone DKEY-1K1 in linkage group 8, complete
              sequence
          Length = 227475

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      tatatatattgcttaaatatc 25
              |||||||||||||||||||||
Sbjct: 227327 tatatatattgcttaaatatc 227347



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      tatatatattgcttaaatat 24
              ||||||||||||||||||||
Sbjct: 227276 tatatatattgcttaaatat 227257
to top
>gb|AY122086.1| Drosophila melanogaster GH02773 full insert cDNA
          Length = 890

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 424 ctccttcagcagctccgcaag 444
           |||||||||||||||||||||
Sbjct: 425 ctccttcagcagctccgcaag 445
to top
>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 164597

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    ctccttcagcagctccgcaag 444
              |||||||||||||||||||||
Sbjct: 120453 ctccttcagcagctccgcaag 120433
to top
>gb|AC093006.4| Homo sapiens 3 BAC RP11-394D14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 215577

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    agacatgtagaacatgtagaa 136
              |||||||||||||||||||||
Sbjct: 204793 agacatgtagaacatgtagaa 204813
to top
>ref|NM_138199.2| Drosophila melanogaster Rhythmically expressed gene 2 CG3200-RA
           (Reg-2), mRNA
          Length = 872

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 424 ctccttcagcagctccgcaag 444
           |||||||||||||||||||||
Sbjct: 425 ctccttcagcagctccgcaag 445
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 449      ttcttctcgtcctccacgtcc 469
                |||||||||||||||||||||
Sbjct: 17717771 ttcttctcgtcctccacgtcc 17717751
to top
>gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 from the MHC region,
             complete sequence
          Length = 153869

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   aagtacacagcaaccaagaca 120
             |||||||||||||||||||||
Sbjct: 29779 aagtacacagcaaccaagaca 29799
to top
>gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 from the MHC region,
              complete sequence
          Length = 172199

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    aagtacacagcaaccaagaca 120
              |||||||||||||||||||||
Sbjct: 124195 aagtacacagcaaccaagaca 124215
to top
>gb|AF230340.1|AF230340 Mus musculus nuclear RNA polymerase I small specific subunit Rpa12
            gene, complete cds
          Length = 4591

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 100  aagtacacagcaaccaagaca 120
            |||||||||||||||||||||
Sbjct: 2214 aagtacacagcaaccaagaca 2194
to top
>gb|AF173882.1|AF173882 Bos taurus N-type calcium channel alpha1B subunit (CACNA1B) mRNA,
            complete cds
          Length = 7121

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 383  ttctccagcgacttctgcttccggt 407
            |||||||| ||||||||||||||||
Sbjct: 6301 ttctccagggacttctgcttccggt 6277
to top
>ref|NM_174632.2| Bos taurus calcium channel, voltage-dependent, L type, alpha 1B
            subunit (CACNA1B), mRNA
          Length = 7121

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 383  ttctccagcgacttctgcttccggt 407
            |||||||| ||||||||||||||||
Sbjct: 6301 ttctccagggacttctgcttccggt 6277
to top
>emb|BX677669.2| Zebrafish DNA sequence from clone DKEY-29I9 in linkage group 22,
            complete sequence
          Length = 35534

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 280  tgttttctcctcggctcagct 300
            |||||||||||||||||||||
Sbjct: 1104 tgttttctcctcggctcagct 1084
to top
>emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 in linkage group 22,
           complete sequence
          Length = 206348

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 280 tgttttctcctcggctcagct 300
           |||||||||||||||||||||
Sbjct: 897 tgttttctcctcggctcagct 917
to top
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete
              sequence
          Length = 307657

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    ctccttcagcagctccgcaag 444
              |||||||||||||||||||||
Sbjct: 285692 ctccttcagcagctccgcaag 285672
to top
>gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 from the MHC region, complete
              sequence
          Length = 158414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    aagtacacagcaaccaagaca 120
              |||||||||||||||||||||
Sbjct: 124177 aagtacacagcaaccaagaca 124197
to top
>gb|U65492.1|DMU65492 Drosophila melanogaster Dreg-2 protein mRNA, complete cds
          Length = 934

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 424 ctccttcagcagctccgcaag 444
           |||||||||||||||||||||
Sbjct: 475 ctccttcagcagctccgcaag 495
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 453     tctcgtcctccacgtccgggt 473
               |||||||||||||||||||||
Sbjct: 3017279 tctcgtcctccacgtccgggt 3017299
to top
>emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, complete sequence
          Length = 186380

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     tatatatattgcttaaatatc 25
             |||||||||||||||||||||
Sbjct: 53345 tatatatattgcttaaatatc 53365



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tatatatattgcttaaatat 24
             ||||||||||||||||||||
Sbjct: 53340 tatatatattgcttaaatat 53321
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 449      ttcttctcgtcctccacgtcc 469
                |||||||||||||||||||||
Sbjct: 17812197 ttcttctcgtcctccacgtcc 17812177
to top
>emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chromosome 17, complete
             sequence
          Length = 202624

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 100   aagtacacagcaaccaagaca 120
             |||||||||||||||||||||
Sbjct: 61607 aagtacacagcaaccaagaca 61587
to top
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190042

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 48431 aaccaagacatgtagaacat 48450
to top
>gb|AC167202.8| Mus musculus  BAC RP24-243A15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 180658

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 19798 aaccaagacatgtagaacat 19779
to top
>ref|XM_871105.1| PREDICTED: Bos taurus similar to Zinc finger protein 319 (LOC618783),
            mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 444  gccgcttcttctcgtcctcc 463
            ||||||||||||||||||||
Sbjct: 1385 gccgcttcttctcgtcctcc 1404
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 518     aggatctcgatcgcgtcttc 537
               ||||||||||||||||||||
Sbjct: 2660291 aggatctcgatcgcgtcttc 2660310
to top
>gb|AC124621.18| Mus musculus chromosome 1, clone RP23-393P20, complete sequence
          Length = 180208

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 10518 aaccaagacatgtagaacat 10537
to top
>gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, complete sequence
          Length = 197426

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 36513 aaccaagacatgtagaacat 36532
to top
>gb|AC166157.5| Mus musculus BAC clone RP24-193D9 from chromosome 1, complete sequence
          Length = 160305

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 16546 aaccaagacatgtagaacat 16527
to top
>gb|AC157545.12| Mus musculus chromosome 1, clone RP23-317L18, complete sequence
          Length = 197367

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 50398 aaccaagacatgtagaacat 50379
to top
>gb|AC163615.5| Mus musculus BAC clone RP23-104L12 from chromosome 8, complete sequence
          Length = 222950

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 436    ctccgcaagccgcttcttctcgtcctcc 463
              |||| ||||| |||||||||||||||||
Sbjct: 215543 ctcctcaagcagcttcttctcgtcctcc 215516
to top
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence
          Length = 181548

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    caaactgcaaccacaatcat 164
              ||||||||||||||||||||
Sbjct: 179511 caaactgcaaccacaatcat 179492
to top
>ref|XM_542214.2| PREDICTED: Canis familiaris similar to plasticity-related protein 2
            (LOC485096), mRNA
          Length = 2202

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  ctccagcgacttctgcttcc 404
            ||||||||||||||||||||
Sbjct: 1251 ctccagcgacttctgcttcc 1232
to top
>gb|AC102157.12| Mus musculus chromosome 1, clone RP23-393K4, complete sequence
          Length = 220638

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 22696 aaccaagacatgtagaacat 22715
to top
>gb|AC122386.3| Mus musculus BAC clone RP24-72H18 from chromosome 7, complete sequence
          Length = 161949

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    caaactgcaaccacaatcat 164
              ||||||||||||||||||||
Sbjct: 135025 caaactgcaaccacaatcat 135044
to top
>gb|AC124746.3| Mus musculus BAC clone RP23-242B22 from 15, complete sequence
          Length = 183209

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    aaccaagacatgtagaacat 130
              ||||||||||||||||||||
Sbjct: 181485 aaccaagacatgtagaacat 181466
to top
>gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, complete sequence
          Length = 200339

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 37996 aaccaagacatgtagaacat 37977
to top
>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    acatgtagaacatgtagaaa 137
              ||||||||||||||||||||
Sbjct: 134557 acatgtagaacatgtagaaa 134576
to top
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    gcactgttttctcctcggct 295
              ||||||||||||||||||||
Sbjct: 818556 gcactgttttctcctcggct 818537
to top
>emb|AL450999.5| Human DNA sequence from clone RP11-152M6 on chromosome 1 Contains the
             OR1C1 gene for olfactory receptor, family 1, subfamily C,
             member 1 and a  7 transmembrane receptor (rhodopsin
             family) protein pseudogene, complete sequence
          Length = 31887

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tatatatattgcttaaatat 24
             ||||||||||||||||||||
Sbjct: 26607 tatatatattgcttaaatat 26626
to top
>gb|AC090246.9| Homo sapiens chromosome 18, clone RP11-699C17, complete sequence
          Length = 176433

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   cctccttcagcagctccgcaagcc 446
             ||||||||||||||||| ||||||
Sbjct: 35673 cctccttcagcagctccccaagcc 35650
to top
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence
          Length = 186799

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aaccaagacatgtagaacat 130
              ||||||||||||||||||||
Sbjct: 107147 aaccaagacatgtagaacat 107166
to top
>gb|AC104018.3| Homo sapiens chromosome 8, clone RP11-354A14, complete sequence
          Length = 186256

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   acagcaaccaagacatgtag 125
             ||||||||||||||||||||
Sbjct: 61560 acagcaaccaagacatgtag 61579
to top
>gb|AC105227.6| Homo sapiens chromosome 18, clone RP11-1030E3, complete sequence
          Length = 185568

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 423    cctccttcagcagctccgcaagcc 446
              ||||||||||||||||| ||||||
Sbjct: 171107 cctccttcagcagctccccaagcc 171084
to top
>gb|AC171386.3| Sorex araneus clone SA_Ba-429O4, complete sequence
          Length = 144034

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     taaaacaaaagaactcccaa 81
              ||||||||||||||||||||
Sbjct: 120260 taaaacaaaagaactcccaa 120241
to top
>gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, complete sequence
          Length = 187574

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    aacaaaagaactcccaacat 84
             ||||||||||||||||||||
Sbjct: 73666 aacaaaagaactcccaacat 73685
to top
>gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, complete sequence
          Length = 161775

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    aacaaaagaactcccaacat 84
             ||||||||||||||||||||
Sbjct: 88767 aacaaaagaactcccaacat 88786
to top
>gb|AC174742.8| Mus musculus  BAC RP24-258O12 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 163118

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 65849 aaccaagacatgtagaacat 65868
to top
>gb|DQ019314.1| Chlamydomonas reinhardtii soluble starch synthase III mRNA,
           complete cds
          Length = 3729

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 gcctccttcagcagctccgc 441
           ||||||||||||||||||||
Sbjct: 128 gcctccttcagcagctccgc 109
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>gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse BAC) complete sequence
          Length = 142488

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaccaagacatgtagaacat 130
             ||||||||||||||||||||
Sbjct: 90097 aaccaagacatgtagaacat 90078
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>gb|AC146266.4| Pan troglodytes BAC clone RP43-30L11 from chromosome 7, complete sequence
          Length = 187603

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    catcttccttcctactctac 186
              ||||||||||||||||||||
Sbjct: 140804 catcttccttcctactctac 140823
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 459     cctccacgtccgggttcgcc 478
               ||||||||||||||||||||
Sbjct: 4874400 cctccacgtccgggttcgcc 4874381
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 350     gcgccccgcgcagcaccgcc 369
               ||||||||||||||||||||
Sbjct: 4362810 gcgccccgcgcagcaccgcc 4362791



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    gccccgcgcagcaccgccgg 371
              ||||||||||||||||||||
Sbjct: 693174 gccccgcgcagcaccgccgg 693155
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>gb|AC079248.5| Homo sapiens BAC clone RP11-24J11 from 2, complete sequence
          Length = 128535

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    actgtaaaacaaaagaactc 77
             ||||||||||||||||||||
Sbjct: 20916 actgtaaaacaaaagaactc 20897
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>gb|AC009263.6|AC009263 Homo sapiens clone RP11-377B19 from 7q31.3, complete sequence
          Length = 182502

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    catcttccttcctactctac 186
              ||||||||||||||||||||
Sbjct: 105545 catcttccttcctactctac 105564
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>gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 182105

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    aaccaagacatgtagaacat 130
              ||||||||||||||||||||
Sbjct: 133375 aaccaagacatgtagaacat 133356
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 351     cgccccgcgcagcaccgccg 370
               ||||||||||||||||||||
Sbjct: 1709970 cgccccgcgcagcaccgccg 1709989
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      gcagcagaagagccgttaac 55
               ||||||||||||||||||||
Sbjct: 2393773 gcagcagaagagccgttaac 2393754
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>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 436   ctccgcaagccgcttcttctcgtcctcc 463
             |||| ||||| |||||||||||||||||
Sbjct: 15461 ctcctcaagcagcttcttctcgtcctcc 15434
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>gb|AC172027.4| Mus musculus  BAC RP24-219P17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 185679

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aaccaagacatgtagaacat 130
              ||||||||||||||||||||
Sbjct: 115983 aaccaagacatgtagaacat 116002
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>gb|AC171183.6| Mus musculus  BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J
            Male) Mouse BAC Library) complete sequence
          Length = 211697

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  aaccaagacatgtagaacat 130
            ||||||||||||||||||||
Sbjct: 1383 aaccaagacatgtagaacat 1402


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,075,492
Number of Sequences: 3902068
Number of extensions: 5075492
Number of successful extensions: 101189
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100557
Number of HSP's gapped (non-prelim): 626
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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