>Y5161_ARATH (Q9M015) Protein At5g01610|
          Length = 170

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = -2

Query: 575 VVSYGTEITAFAEKGRIKKVKGIKTRELMVWLPVEEISLD 456
           V+ + T +T   EKG++  V+GIKT+ +M+W+ V  IS D
Sbjct: 101 VLKFTTTVTGHLEKGKLTDVEGIKTK-VMIWVKVTSISTD 139

>FWDF_METJA (Q58566) Polyferredoxin protein fwdF|
          Length = 355

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
 Frame = -2

Query: 479 PVEEISLDEPATGKLI-----CKSIAGFSKIFPASAFHIPEKENKKANCAGPKPLVLMER 315
           P E I +++P  G+LI     C +      I P SA   P+ ++K             E+
Sbjct: 255 PAEAIEVEKPFKGELIIDVNACNACGACISICPCSALEFPKPKDK------------AEK 302

Query: 314 APRVVRTTDPSAV*GAALRSCSFVVLKI 231
            PR++   +   + GA  ++C    +K+
Sbjct: 303 VPRIIVNQNLCVLCGACAKACPVNAIKV 330

>YCF2_SILLA (Q589A6) Protein ycf2|
          Length = 2223

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W  WS LF+C+ +  P S   P+   S RGK+ I
Sbjct: 2021 PRIWTPWSFLFYCIER--PNSLGFPYWAGSLRGKRII 2055

>YCF2_EPIVI (P30072) Protein ycf2|
          Length = 2216

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  +F+C+ +  P     P+   SFRGK+ +
Sbjct: 2013 PRIWRPWGFIFYCIER--PNELGFPYWSRSFRGKRIV 2047

>FLII_BORBU (P52607) Flagellum-specific ATP synthase (EC 3.6.3.14)|
          Length = 436

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 533 GRIKKVKGIKTRELMVWLPVEEISLDEPATGKLICKSIAGFS 408
           GR++K+KG+    L     + ++ L +   GK +C  + GF+
Sbjct: 22  GRVQKIKGLLVESLGPQCAIGDLCLIDQRNGKKVCAEVLGFN 63

>YCF2_TOBAC (P09976) Protein ycf2|
          Length = 2280

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  LF C+ +  P     P+   SFRGK+ I
Sbjct: 2078 PRIWRPWGFLFDCIER--PNELGFPYWSRSFRGKRII 2112

>YCF2_OENHO (Q9MEF2) Protein ycf2|
          Length = 2280

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  LF C+ +  P     P+   SFRGK+ I
Sbjct: 2078 PRIWRPWGFLFDCIER--PNELGFPYWSRSFRGKRII 2112

>YCF2_SPIOL (P08973) Protein ycf2|
          Length = 2131

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W  W  LF C+ +  P     P+   SFRGK++I
Sbjct: 1913 PRIWNPWGFLFDCIER--PNELGFPYWARSFRGKRSI 1947

>YCF2B_ATRBE (Q8S8U1) Protein ycf2|
          Length = 2291

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  LF C+ +  P     P+   SFRGK+ I
Sbjct: 2089 PRIWRPWGFLFDCIER--PNELGFPYWSRSFRGKRII 2123

>YCF2A_ATRBE (Q8S8V2) Protein ycf2|
          Length = 2291

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  LF C+ +  P     P+   SFRGK+ I
Sbjct: 2089 PRIWRPWGFLFDCIER--PNELGFPYWSRSFRGKRII 2123

>YCF2_LYCES (P61242) Protein ycf2|
          Length = 2278

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  LF C+ +  P     P+   SFRGK+ I
Sbjct: 2079 PRIWRPWGFLFDCIER--PNELGFPYWSRSFRGKRII 2113

>YCF2_PANGI (Q68RU4) Protein ycf2|
          Length = 2110

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+ W  LF C+ +  P     P+   SFRGK+ +
Sbjct: 1892 PRIWRPWGFLFDCIER--PNELGFPYWSRSFRGKRIL 1926

>CD69_MOUSE (P37217) Early activation antigen CD69|
          Length = 199

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 208 ICLCTSNVIAQSSAYIAAYGCPGIYKPL-SQPHKLLLC 98
           + L TS +IA  +  +  Y CPG+Y+ L S  H +  C
Sbjct: 48  VVLITSLIIALIALNVGKYNCPGLYEKLESSDHHVATC 85

>YCF2_AMBTC (P61241) Protein ycf2|
          Length = 2304

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 580  PRPWKTWSILFFCLSQTYPVSST*PHSMMSFRGKQAI 690
            PR W+    LF C+ +  P  S  P+   SFRGKQ I
Sbjct: 2093 PRIWRPCGNLFDCIER--PNESRFPYRSRSFRGKQII 2127

>LGT_THEMA (Q9WY05) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 293

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 105 FYVLHSSMLLMYYASVENALILWDGGSTILGXIL 4
           +YVL +   L YY S+ +AL +W+GG  I G ++
Sbjct: 97  YYVLFN---LKYYRSLWDALKIWEGGLAIHGAVI 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,155,924
Number of Sequences: 219361
Number of extensions: 2441146
Number of successful extensions: 6381
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6378
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)