ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags4a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027B16, full insert sequence Length = 5193 Score = 369 bits (186), Expect = 8e-99 Identities = 450/538 (83%) Strand = Plus / Minus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| ||||||||| ||||||||||| |||||||| || |||||| Sbjct: 4867 cgtttctggaagttgaagtacttgatggcatagccaaagatgaagaagaaaacgatgatg 4808 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaaatcatgccgcacacccaaattatcc 214 ||| |||| || | || ||||| || || |||||| |||||||| || | || ||| Sbjct: 4807 tagccaaaatgtgtgagcacaacatatcctaggaaactatgccgcatccctaggttgtcc 4748 Query: 215 tccaaaaattgcttcaccactacagggttcccaccgggtactagaagagaaccaccatgg 274 ||||| ||||||||||| || |||| |||||||||| || |||| | |||||| Sbjct: 4747 tccaagaattgcttcactaccgtagggctcccaccgggaaccgaaagaacatcaccattt 4688 Query: 275 tcaccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtag 334 | ||||||||| || || |||||||||||||||||||| || || ||||| ||||||||| Sbjct: 4687 ttaccaaactgtgacgccacaacaccatagatggtccatgacacggggtttgcccagtag 4628 Query: 335 taccacctccaccaaatcggtatcgccgttctgacaacgaggaacccggcaaacaggttc 394 |||||||||||||||||||||||| || || |||||||||||||| ||||| || ||| Sbjct: 4627 taccacctccaccaaatcggtatcaacggcctaacaacgaggaacccagcaaaaagattc 4568 Query: 395 cagagagggagtacaaaggatacgagtatgcttgcaagcatcgcagacggagtcaatgac 454 |||||||| ||||||||||||| ||| ||| |||||||||| ||||| || || ||| | Sbjct: 4567 cagagaggaagtacaaaggatatgagaatgtttgcaagcattgcagatggggtgcatgcc 4508 Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 ||||||||||| || |||||||||||||||||||| ||||| | ||| |||||||||||| Sbjct: 4507 accaacatcatcccaaacaatgtgaagtagttgaaacttgctacaataaagaacatgaaa 4448 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgtat 574 |||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||| Sbjct: 4447 tagaagaatttgtcggctttccagtcatatccaatcattgcatagatgataatagtgtat 4388 Query: 575 aacatcccttggaggatgttgtagatgacctccatgcatgcctgagctaatgcatagg 632 | ||||| | | |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 4387 agaatccccagtaagatgttgtagatgacctccacgcatgcctgagcaaatgcatagg 4330
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Plus Query: 368 acaacgaggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgctt 427 |||||||||||||| ||||| || ||||||||||| ||||||||||||| ||| ||| || Sbjct: 77250 acaacgaggaacccagcaaaaagattccagagaggaagtacaaaggatatgagaatgttt 77309 Query: 428 gcaagcatcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttg 487 |||||||| ||||| || || ||| |||||||||||| || |||||||||||||||||| Sbjct: 77310 gcaagcattgcagatggggtgcatgccaccaacatcatcccaaacaatgtgaagtagttg 77369 Query: 488 aagcttgcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatcca 547 || ||||| | ||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 77370 aaacttgctacaataaagaacatgaaatagaagaatttgtcggctttccagtcatatcca 77429 Query: 548 atcatcacatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctcc 607 ||||| ||||||||| || ||||||| ||||| || | ||||||||||||||||||| Sbjct: 77430 atcattgcatagatgataatagtgtatagaatcccctgtaagatgttgtagatgacctcc 77489 Query: 608 atgcatgcctg 618 | ||||||||| Sbjct: 77490 acgcatgcctg 77500 Score = 143 bits (72), Expect = 8e-31 Identities = 216/264 (81%) Strand = Plus / Plus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| ||||||||| ||||||||||| |||||||| || |||||| Sbjct: 76882 cgtttctggaagttgaagtacttgatggcatagccaaagatgaagaagaaaacgatgatg 76941 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaaatcatgccgcacacccaaattatcc 214 ||| |||| || | || ||||| || || |||||| |||||||| || | || ||| Sbjct: 76942 tagccaaaatgtgtgagcacaacatatcctaggaaactatgccgcatccctaggttgtcc 77001 Query: 215 tccaaaaattgcttcaccactacagggttcccaccgggtactagaagagaaccaccatgg 274 ||||| ||||||||||| || |||| |||||||||| || |||| | |||||| Sbjct: 77002 tccaagaattgcttcactaccgtagggctcccaccgggaaccgaaagaacatcaccattt 77061 Query: 275 tcaccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtag 334 | ||||||||| || || |||||||||||||||||||| || || ||||| ||||||||| Sbjct: 77062 ttaccaaactgtgacgccacaacaccatagatggtccatgacacggggtttgcccagtag 77121 Query: 335 taccacctccaccaaatcggtatc 358 |||||||||||||||||||||||| Sbjct: 77122 taccacctccaccaaatcggtatc 77145
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Plus Query: 368 acaacgaggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgctt 427 |||||||||||||| ||||| || ||||||||||| ||||||||||||| ||| ||| || Sbjct: 21419500 acaacgaggaacccagcaaaaagattccagagaggaagtacaaaggatatgagaatgttt 21419559 Query: 428 gcaagcatcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttg 487 |||||||| ||||| || || ||| |||||||||||| || |||||||||||||||||| Sbjct: 21419560 gcaagcattgcagatggggtgcatgccaccaacatcatcccaaacaatgtgaagtagttg 21419619 Query: 488 aagcttgcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatcca 547 || ||||| | ||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 21419620 aaacttgctacaataaagaacatgaaatagaagaatttgtcggctttccagtcatatcca 21419679 Query: 548 atcatcacatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctcc 607 ||||| ||||||||| || ||||||| ||||| || | ||||||||||||||||||| Sbjct: 21419680 atcattgcatagatgataatagtgtatagaatcccctgtaagatgttgtagatgacctcc 21419739 Query: 608 atgcatgcctg 618 | ||||||||| Sbjct: 21419740 acgcatgcctg 21419750 Score = 143 bits (72), Expect = 8e-31 Identities = 216/264 (81%) Strand = Plus / Plus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| ||||||||| ||||||||||| |||||||| || |||||| Sbjct: 21419132 cgtttctggaagttgaagtacttgatggcatagccaaagatgaagaagaaaacgatgatg 21419191 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaaatcatgccgcacacccaaattatcc 214 ||| |||| || | || ||||| || || |||||| |||||||| || | || ||| Sbjct: 21419192 tagccaaaatgtgtgagcacaacatatcctaggaaactatgccgcatccctaggttgtcc 21419251 Query: 215 tccaaaaattgcttcaccactacagggttcccaccgggtactagaagagaaccaccatgg 274 ||||| ||||||||||| || |||| |||||||||| || |||| | |||||| Sbjct: 21419252 tccaagaattgcttcactaccgtagggctcccaccgggaaccgaaagaacatcaccattt 21419311 Query: 275 tcaccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtag 334 | ||||||||| || || |||||||||||||||||||| || || ||||| ||||||||| Sbjct: 21419312 ttaccaaactgtgacgccacaacaccatagatggtccatgacacggggtttgcccagtag 21419371 Query: 335 taccacctccaccaaatcggtatc 358 |||||||||||||||||||||||| Sbjct: 21419372 taccacctccaccaaatcggtatc 21419395 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aagacgaagaagatgacaatgatg 154 |||||| ||||||||||||||||| Sbjct: 19320040 aagacgcagaagatgacaatgatg 19320063 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ggatgttgtagatgacctcc 607 |||||||||||||||||||| Sbjct: 16658619 ggatgttgtagatgacctcc 16658638 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 266 ccaccatggtcaccaaactgcgatgcaa 293 ||||||||||||||||||| | |||||| Sbjct: 13244690 ccaccatggtcaccaaacttctatgcaa 13244717
>emb|AJ535052.1|OSA535052 Oryza sativa (japonica cultivar-group) pdr3 gene for PDR-like ABC transporter, exons 1-19 Length = 9133 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 368 acaacgaggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgctt 427 |||||||||||||| ||||| || ||||||||||| ||||||||||||| ||| ||| || Sbjct: 8761 acaacgaggaacccagcaaaaagattccagagaggaagtacaaaggatatgagaatgttt 8702 Query: 428 gcaagcatcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttg 487 |||||||| ||||| || || ||| |||||||||||| || |||||||||||||||||| Sbjct: 8701 gcaagcattgcagatggggtgcatgccaccaacatcatcccaaacaatgtgaagtagttg 8642 Query: 488 aagcttgcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatcca 547 || ||||| | ||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 8641 aaacttgctacaataaagaacatgaaatagaagaatttgtcggctttccagtcatatcca 8582 Query: 548 atcatcacatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctcc 607 ||||| ||||||||| || ||||||| ||||| || | ||||||||||||||||||| Sbjct: 8581 atcattgcatagatgataatagtgtatagaatcccctgtaagatgttgtagatgacctcc 8522 Query: 608 atgcatgcctg 618 | ||||||||| Sbjct: 8521 acgcatgcctg 8511 Score = 143 bits (72), Expect = 8e-31 Identities = 216/264 (81%) Strand = Plus / Minus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| ||||||||| ||||||||||| |||||||| || |||||| Sbjct: 9129 cgtttctggaagttgaagtacttgatggcatagccaaagatgaagaagaaaacgatgatg 9070 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaaatcatgccgcacacccaaattatcc 214 ||| |||| || | || ||||| || || |||||| |||||||| || | || ||| Sbjct: 9069 tagccaaaatgtgtgagcacaacatatcctaggaaactatgccgcatccctaggttgtcc 9010 Query: 215 tccaaaaattgcttcaccactacagggttcccaccgggtactagaagagaaccaccatgg 274 ||||| ||||||||||| || |||| |||||||||| || |||| | |||||| Sbjct: 9009 tccaagaattgcttcactaccgtagggctcccaccgggaaccgaaagaacatcaccattt 8950 Query: 275 tcaccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtag 334 | ||||||||| || || |||||||||||||||||||| || || ||||| ||||||||| Sbjct: 8949 ttaccaaactgtgacgccacaacaccatagatggtccatgacacggggtttgcccagtag 8890 Query: 335 taccacctccaccaaatcggtatc 358 |||||||||||||||||||||||| Sbjct: 8889 taccacctccaccaaatcggtatc 8866
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Plus Query: 368 acaacgaggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgctt 427 |||||||||||||| ||||| || ||||||||||| ||||||||||||| ||| ||| || Sbjct: 21729699 acaacgaggaacccagcaaaaagattccagagaggaagtacaaaggatatgagaatgttt 21729758 Query: 428 gcaagcatcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttg 487 |||||||| ||||| || || ||| |||||||||||| || |||||||||||||||||| Sbjct: 21729759 gcaagcattgcagatggggtgcatgccaccaacatcatcccaaacaatgtgaagtagttg 21729818 Query: 488 aagcttgcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatcca 547 || ||||| | ||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 21729819 aaacttgctacaataaagaacatgaaatagaagaatttgtcggctttccagtcatatcca 21729878 Query: 548 atcatcacatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctcc 607 ||||| ||||||||| || ||||||| ||||| || | ||||||||||||||||||| Sbjct: 21729879 atcattgcatagatgataatagtgtatagaatcccctgtaagatgttgtagatgacctcc 21729938 Query: 608 atgcatgcctg 618 | ||||||||| Sbjct: 21729939 acgcatgcctg 21729949 Score = 143 bits (72), Expect = 8e-31 Identities = 216/264 (81%) Strand = Plus / Plus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| ||||||||| ||||||||||| |||||||| || |||||| Sbjct: 21729331 cgtttctggaagttgaagtacttgatggcatagccaaagatgaagaagaaaacgatgatg 21729390 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaaatcatgccgcacacccaaattatcc 214 ||| |||| || | || ||||| || || |||||| |||||||| || | || ||| Sbjct: 21729391 tagccaaaatgtgtgagcacaacatatcctaggaaactatgccgcatccctaggttgtcc 21729450 Query: 215 tccaaaaattgcttcaccactacagggttcccaccgggtactagaagagaaccaccatgg 274 ||||| ||||||||||| || |||| |||||||||| || |||| | |||||| Sbjct: 21729451 tccaagaattgcttcactaccgtagggctcccaccgggaaccgaaagaacatcaccattt 21729510 Query: 275 tcaccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtag 334 | ||||||||| || || |||||||||||||||||||| || || ||||| ||||||||| Sbjct: 21729511 ttaccaaactgtgacgccacaacaccatagatggtccatgacacggggtttgcccagtag 21729570 Query: 335 taccacctccaccaaatcggtatc 358 |||||||||||||||||||||||| Sbjct: 21729571 taccacctccaccaaatcggtatc 21729594 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aagacgaagaagatgacaatgatg 154 |||||| ||||||||||||||||| Sbjct: 19479589 aagacgcagaagatgacaatgatg 19479612 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ggatgttgtagatgacctcc 607 |||||||||||||||||||| Sbjct: 16752486 ggatgttgtagatgacctcc 16752505 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 266 ccaccatggtcaccaaactgcgatgcaa 293 ||||||||||||||||||| | |||||| Sbjct: 13324869 ccaccatggtcaccaaacttctatgcaa 13324896
>gb|AY109779.1| Zea mays CL36083_1 mRNA sequence Length = 914 Score = 147 bits (74), Expect = 5e-32 Identities = 152/178 (85%) Strand = Plus / Minus Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 |||||||||||||||||||||||||||||||||||||||||| | ||||| | || |||| Sbjct: 424 accaacatcatgccgaacaatgtgaagtagttgaagcttgcagtgatgaaaatcaggaaa 365 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgtat 574 |||||||| || || |||||||||| ||||| |||||| |||| |||| || |||||| Sbjct: 364 tagaagaatttatccgctttccagtcgtatccgatcatcgcatatatgatgactgtgtac 305 Query: 575 aacatcccttggaggatgttgtagatgacctccatgcatgcctgagctaatgcatagg 632 | ||||| || | |||| ||||||||||||||| |||| |||||| |||||||||| Sbjct: 304 agtatcccctgtaagatggtgtagatgacctccacacatgtctgagcaaatgcatagg 247 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 91 ctaacgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaat 150 ||||||||| |||||||| ||||||||||||||||| || || |||||||||| ||||| Sbjct: 788 ctaacgtttctggaagttgaagaacttgatggaataaccgaatacgaagaagaacacaat 729 Query: 151 gatgtaggcaaagtgagctaggacaacgtagccaaggaaatcatgccgcacacccaaatt 210 || |||||| || || | || ||||| ||||| || || |||||| | | || | ||| Sbjct: 728 gacgtaggcgaaatggacgagcacaacatagccgagtaagtcatgctggatgccgagatt 669 Query: 211 atcctccaaaaattgcttcaccactacagggttcccaccgggtactagaagagaaccacc 270 ||||| ||| || ||||||||||| || || |||||||||| ||| ||| ||| | Sbjct: 668 atccttcaagaactgcttcaccaccacgggcgtcccaccgggaactgaaagctcaccttc 609 Query: 271 atggtcaccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggccca 330 | || |||||||| || |||||||| |||||||||||||| || || ||||| ||||| Sbjct: 608 gttctcgccaaactgagacgcaacaacgccatagatggtccacgacacagggttcgccca 549 Query: 331 gtagtaccacctccaccaaatcggtatcgccg 362 ||||||||||||||||||||| ||||| |||| Sbjct: 548 gtagtaccacctccaccaaattggtattgccg 517
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 129 bits (65), Expect = 1e-26 Identities = 200/245 (81%) Strand = Plus / Plus Query: 374 aggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgcttgcaagc 433 |||||||| ||||||| |||||| ||||||||| |||||| || ||| ||| | |||||| Sbjct: 12663309 aggaacccagcaaacaagttccaaagagggagtgcaaaggttatgagaatgttcgcaagc 12663368 Query: 434 atcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttgaagctt 493 | ||||| || || ||| |||||||||||| ||||| ||||||||||||||||||||| Sbjct: 12663369 agtgcagatggggtgcatgccaccaacatcattccgaaaaatgtgaagtagttgaagctt 12663428 Query: 494 gcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatcatc 553 | || ||||||||| | ||||| ||||| ||| | ||||||| || ||||| ||||| Sbjct: 12663429 gaaacaatgaagaatagaaaataaaagaatttgctagctttccaatcgtatccgatcatt 12663488 Query: 554 acatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctccatgcat 613 ||||||||| || ||||| || |||||||| | ||| ||||| |||| ||||| || | Sbjct: 12663489 gcatagatgatgaccgtgtacaaaatcccttgtatgatattgtaaatgaactccacgctt 12663548 Query: 614 gcctg 618 ||||| Sbjct: 12663549 gcctg 12663553 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 278 ccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtac 337 |||||||| ||||||| |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 12663118 ccaaactgtgatgcaatgacaccatatattgtccaggatactgggtttgcccaatagtac 12663177 Query: 338 cacctccaccaaatcggtat 357 |||||||||||||| ||||| Sbjct: 12663178 cacctccaccaaattggtat 12663197 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 6074177 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 6074126
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 129 bits (65), Expect = 1e-26 Identities = 200/245 (81%) Strand = Plus / Plus Query: 374 aggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgcttgcaagc 433 |||||||| ||||||| |||||| ||||||||| |||||| || ||| ||| | |||||| Sbjct: 60368 aggaacccagcaaacaagttccaaagagggagtgcaaaggttatgagaatgttcgcaagc 60427 Query: 434 atcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttgaagctt 493 | ||||| || || ||| |||||||||||| ||||| ||||||||||||||||||||| Sbjct: 60428 agtgcagatggggtgcatgccaccaacatcattccgaaaaatgtgaagtagttgaagctt 60487 Query: 494 gcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatcatc 553 | || ||||||||| | ||||| ||||| ||| | ||||||| || ||||| ||||| Sbjct: 60488 gaaacaatgaagaatagaaaataaaagaatttgctagctttccaatcgtatccgatcatt 60547 Query: 554 acatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctccatgcat 613 ||||||||| || ||||| || |||||||| | ||| ||||| |||| ||||| || | Sbjct: 60548 gcatagatgatgaccgtgtacaaaatcccttgtatgatattgtaaatgaactccacgctt 60607 Query: 614 gcctg 618 ||||| Sbjct: 60608 gcctg 60612 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 278 ccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtac 337 |||||||| ||||||| |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 60177 ccaaactgtgatgcaatgacaccatatattgtccaggatactgggtttgcccaatagtac 60236 Query: 338 cacctccaccaaatcggtat 357 |||||||||||||| ||||| Sbjct: 60237 cacctccaccaaattggtat 60256
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 129 bits (65), Expect = 1e-26 Identities = 200/245 (81%) Strand = Plus / Plus Query: 374 aggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgcttgcaagc 433 |||||||| ||||||| |||||| ||||||||| |||||| || ||| ||| | |||||| Sbjct: 11586 aggaacccagcaaacaagttccaaagagggagtgcaaaggttatgagaatgttcgcaagc 11645 Query: 434 atcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttgaagctt 493 | ||||| || || ||| |||||||||||| ||||| ||||||||||||||||||||| Sbjct: 11646 agtgcagatggggtgcatgccaccaacatcattccgaaaaatgtgaagtagttgaagctt 11705 Query: 494 gcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatcatc 553 | || ||||||||| | ||||| ||||| ||| | ||||||| || ||||| ||||| Sbjct: 11706 gaaacaatgaagaatagaaaataaaagaatttgctagctttccaatcgtatccgatcatt 11765 Query: 554 acatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctccatgcat 613 ||||||||| || ||||| || |||||||| | ||| ||||| |||| ||||| || | Sbjct: 11766 gcatagatgatgaccgtgtacaaaatcccttgtatgatattgtaaatgaactccacgctt 11825 Query: 614 gcctg 618 ||||| Sbjct: 11826 gcctg 11830 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 278 ccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtac 337 |||||||| ||||||| |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 11395 ccaaactgtgatgcaatgacaccatatattgtccaggatactgggtttgcccaatagtac 11454 Query: 338 cacctccaccaaatcggtat 357 |||||||||||||| ||||| Sbjct: 11455 cacctccaccaaattggtat 11474
>emb|AJ535051.1|OSA535051 Oryza sativa (japonica cultivar-group) pdr4 gene for PDR-like ABC transporter, exons 1-22 Length = 19651 Score = 129 bits (65), Expect = 1e-26 Identities = 200/245 (81%) Strand = Plus / Minus Query: 374 aggaacccggcaaacaggttccagagagggagtacaaaggatacgagtatgcttgcaagc 433 |||||||| ||||||| |||||| ||||||||| |||||| || ||| ||| | |||||| Sbjct: 19273 aggaacccagcaaacaagttccaaagagggagtgcaaaggttatgagaatgttcgcaagc 19214 Query: 434 atcgcagacggagtcaatgacaccaacatcatgccgaacaatgtgaagtagttgaagctt 493 | ||||| || || ||| |||||||||||| ||||| ||||||||||||||||||||| Sbjct: 19213 agtgcagatggggtgcatgccaccaacatcattccgaaaaatgtgaagtagttgaagctt 19154 Query: 494 gcaataatgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatcatc 553 | || ||||||||| | ||||| ||||| ||| | ||||||| || ||||| ||||| Sbjct: 19153 gaaacaatgaagaatagaaaataaaagaatttgctagctttccaatcgtatccgatcatt 19094 Query: 554 acatagatgaggattgtgtataacatcccttggaggatgttgtagatgacctccatgcat 613 ||||||||| || ||||| || |||||||| | ||| ||||| |||| ||||| || | Sbjct: 19093 gcatagatgatgaccgtgtacaaaatcccttgtatgatattgtaaatgaactccacgctt 19034 Query: 614 gcctg 618 ||||| Sbjct: 19033 gcctg 19029 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 278 ccaaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtac 337 |||||||| ||||||| |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 19464 ccaaactgtgatgcaatgacaccatatattgtccaggatactgggtttgcccaatagtac 19405 Query: 338 cacctccaccaaatcggtat 357 |||||||||||||| ||||| Sbjct: 19404 cacctccaccaaattggtat 19385
>ref|XM_478448.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4365 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 |||| |||||||| ||||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 3998 accagcatcatgctaaacaatgtgaagtaggcgaaggccgcaatcataaagaacaggaag 3939 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgta 573 |||||||||||||| | ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 3938 tagaagaacttgtccgccttccactcatagccaatcatggaatagatgaggatagtgta 3880 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 279 caaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtacc 338 |||||||||| |||| || |||||||||||||| || || ||||||||||| ||| ||| Sbjct: 4174 caaactgcgacgcaatcactccatagatggtccaggagaccgggttggcccaatagaacc 4115 Query: 339 acctccaccaaa 350 | |||||||||| Sbjct: 4114 atctccaccaaa 4103 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| |||||||| || ||||||| |||||||| || |||| | Sbjct: 4361 cgtttctggaagttcaagcacttgatgccgtatccaaagaggaagaagaagatgatgacg 4302 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaa 189 ||| | || ||||| || ||||||||||| ||||| Sbjct: 4301 tagccgaaatgagccagcacaacgtagccgaggaa 4267
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 |||| |||||||| ||||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 20164461 accagcatcatgctaaacaatgtgaagtaggcgaaggccgcaatcataaagaacaggaag 20164402 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgta 573 |||||||||||||| | ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 20164401 tagaagaacttgtccgccttccactcatagccaatcatggaatagatgaggatagtgta 20164343 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 279 caaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtacc 338 |||||||||| |||| || |||||||||||||| || || ||||||||||| ||| ||| Sbjct: 20164728 caaactgcgacgcaatcactccatagatggtccaggagaccgggttggcccaatagaacc 20164669 Query: 339 acctccaccaaa 350 | |||||||||| Sbjct: 20164668 atctccaccaaa 20164657 Score = 48.1 bits (24), Expect = 0.035 Identities = 81/100 (81%) Strand = Plus / Minus Query: 90 cctaacgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaa 149 |||| ||||| |||||||| ||| |||||||| || ||||||| |||||||| || | Sbjct: 20164920 cctaccgtttctggaagttcaagcacttgatgccgtatccaaagaggaagaagaagatga 20164861 Query: 150 tgatgtaggcaaagtgagctaggacaacgtagccaaggaa 189 ||| |||| | || ||||| || ||||||||||| ||||| Sbjct: 20164860 tgacgtagccgaaatgagccagcacaacgtagccgaggaa 20164821
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 |||| |||||||| ||||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 66849 accagcatcatgctaaacaatgtgaagtaggcgaaggccgcaatcataaagaacaggaag 66790 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgta 573 |||||||||||||| | ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 66789 tagaagaacttgtccgccttccactcatagccaatcatggaatagatgaggatagtgta 66731 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 279 caaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtacc 338 |||||||||| |||| || |||||||||||||| || || ||||||||||| ||| ||| Sbjct: 67116 caaactgcgacgcaatcactccatagatggtccaggagaccgggttggcccaatagaacc 67057 Query: 339 acctccaccaaa 350 | |||||||||| Sbjct: 67056 atctccaccaaa 67045 Score = 48.1 bits (24), Expect = 0.035 Identities = 81/100 (81%) Strand = Plus / Minus Query: 90 cctaacgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaa 149 |||| ||||| |||||||| ||| |||||||| || ||||||| |||||||| || | Sbjct: 67308 cctaccgtttctggaagttcaagcacttgatgccgtatccaaagaggaagaagaagatga 67249 Query: 150 tgatgtaggcaaagtgagctaggacaacgtagccaaggaa 189 ||| |||| | || ||||| || ||||||||||| ||||| Sbjct: 67248 tgacgtagccgaaatgagccagcacaacgtagccgaggaa 67209
>dbj|AK105311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C08, full insert sequence Length = 1686 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 |||| |||||||| ||||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 1128 accagcatcatgctaaacaatgtgaagtaggcgaaggccgcaatcataaagaacaggaag 1069 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgta 573 |||||||||||||| | ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 1068 tagaagaacttgtccgccttccactcatagccaatcatggaatagatgaggatagtgta 1010 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 279 caaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtacc 338 |||||||||| |||| || |||||||||||||| || || ||||||||||| ||| ||| Sbjct: 1304 caaactgcgacgcaatcactccatagatggtccaggagaccgggttggcccaatagaacc 1245 Query: 339 acctccaccaaa 350 | |||||||||| Sbjct: 1244 atctccaccaaa 1233 Score = 48.1 bits (24), Expect = 0.035 Identities = 81/100 (81%) Strand = Plus / Minus Query: 90 cctaacgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaa 149 |||| ||||| |||||||| ||| |||||||| || ||||||| |||||||| || | Sbjct: 1496 cctaccgtttctggaagttcaagcacttgatgccgtatccaaagaggaagaagaagatga 1437 Query: 150 tgatgtaggcaaagtgagctaggacaacgtagccaaggaa 189 ||| |||| | || ||||| || ||||||||||| ||||| Sbjct: 1436 tgacgtagccgaaatgagccagcacaacgtagccgaggaa 1397
>emb|AJ535050.1|OSA535050 Oryza sativa (japonica cultivar-group) pdr5 gene for PDR-like ABC transporter, exons 1-19 Length = 12922 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 455 accaacatcatgccgaacaatgtgaagtagttgaagcttgcaataatgaagaacatgaaa 514 |||| |||||||| ||||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 12464 accagcatcatgctaaacaatgtgaagtaggcgaaggccgcaatcataaagaacaggaag 12405 Query: 515 tagaagaacttgtcaactttccagtcatatccaatcatcacatagatgaggattgtgta 573 |||||||||||||| | ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 12404 tagaagaacttgtccgccttccactcatagccaatcatggaatagatgaggatagtgta 12346 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 279 caaactgcgatgcaacaacaccatagatggtccaagatactgggttggcccagtagtacc 338 |||||||||| |||| || |||||||||||||| || || ||||||||||| ||| ||| Sbjct: 12731 caaactgcgacgcaatcactccatagatggtccaggagaccgggttggcccaatagaacc 12672 Query: 339 acctccaccaaa 350 | |||||||||| Sbjct: 12671 atctccaccaaa 12660 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 95 cgtttttggaagtttaagaacttgatggaatagccaaagacgaagaagatgacaatgatg 154 ||||| |||||||| ||| |||||||| || ||||||| |||||||| || |||| | Sbjct: 12918 cgtttctggaagttcaagcacttgatgccgtatccaaagaggaagaagaagatgatgacg 12859 Query: 155 taggcaaagtgagctaggacaacgtagccaaggaa 189 ||| | || ||||| || ||||||||||| ||||| Sbjct: 12858 tagccgaaatgagccagcacaacgtagccgaggaa 12824
>gb|AY107802.1| Zea mays PCO123761 mRNA sequence Length = 582 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 320 gggttggcccagtagtaccacctccaccaaa 350 ||||||||||||||||||||||||||||||| Sbjct: 53 gggttggcccagtagtaccacctccaccaaa 23
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 307 ggtccaagatactgggttggcccagtagtaccacctccacca 348 |||||| || || |||||||||||||| |||||||||||||| Sbjct: 4033296 ggtccatgacaccgggttggcccagtaataccacctccacca 4033337
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 307 ggtccaagatactgggttggcccagtagtaccacctccacca 348 |||||| || || |||||||||||||| |||||||||||||| Sbjct: 155200 ggtccatgacaccgggttggcccagtaataccacctccacca 155241
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 307 ggtccaagatactgggttggcccagtagtaccacctccacca 348 |||||| || || |||||||||||||| |||||||||||||| Sbjct: 39 ggtccatgacaccgggttggcccagtaataccacctccacca 80
>dbj|AK061474.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F02, full insert sequence Length = 1246 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 307 ggtccaagatactgggttggcccagtagtaccacctccacca 348 |||||| || || |||||||||||||| |||||||||||||| Sbjct: 899 ggtccatgacaccgggttggcccagtaataccacctccacca 858
>dbj|AK058355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E11, full insert sequence Length = 1519 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 307 ggtccaagatactgggttggcccagtagtaccacctccacca 348 |||||| || || |||||||||||||| |||||||||||||| Sbjct: 977 ggtccatgacaccgggttggcccagtaataccacctccacca 936
>emb|AJ535049.1|OSA535049 Oryza sativa (japonica cultivar-group) partial pdr6 gene for PDR-like ABC transporter, exons 1-23 Length = 9355 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 307 ggtccaagatactgggttggcccagtagtaccacctccacca 348 |||||| || || |||||||||||||| |||||||||||||| Sbjct: 9136 ggtccatgacaccgggttggcccagtaataccacctccacca 9095
>emb|AJ831424.1| Nicotiana plumbaginifolia mRNA for PDR-like ABC transporter (pdr2 gene) Length = 4632 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gcccagtagtaccacctccacca 348 ||||||||||||||||||||||| Sbjct: 4238 gcccagtagtaccacctccacca 4216
>gb|AY129073.1| Rattus norvegicus Rh type C glycoprotein mRNA, complete cds Length = 1958 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gaagagaaccaccatggtcacc 279 |||||||||||||||||||||| Sbjct: 132 gaagagaaccaccatggtcacc 111
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 tttgtactacatatatacacat 67 |||||||||||||||||||||| Sbjct: 138129 tttgtactacatatatacacat 138108
>emb|AL137220.8| Human DNA sequence from clone RP11-354I10 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 126482 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cttcaccactacagggttccca 247 |||||||||||||||||||||| Sbjct: 58977 cttcaccactacagggttccca 58956
>ref|NM_183053.1| Rattus norvegicus Rhesus blood group-associated C glycoprotein (Rhcg), mRNA Length = 1958 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gaagagaaccaccatggtcacc 279 |||||||||||||||||||||| Sbjct: 132 gaagagaaccaccatggtcacc 111
>gb|AC024164.6|AC024164 Homo sapiens chromosome 3 clone RP11-350A17 map 3p, complete sequence Length = 152580 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 aagtttaagaacttgatggaat 125 |||||||||||||||||||||| Sbjct: 133151 aagtttaagaacttgatggaat 133130
>gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K24 map 3p, complete sequence Length = 142190 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 aagtttaagaacttgatggaat 125 |||||||||||||||||||||| Sbjct: 95792 aagtttaagaacttgatggaat 95813
>dbj|AB109389.1| Nicotiana tabacum NtPDR2 mRNA for PDR-type ABC transporter 2, partial cds Length = 3411 Score = 44.1 bits (22), Expect = 0.55 Identities = 52/62 (83%) Strand = Plus / Minus Query: 287 gatgcaacaacaccatagatggtccaagatactgggttggcccagtagtaccacctccac 346 |||||||| | |||||| | |||||| | || ||||| |||||||||||||| |||||| Sbjct: 3053 gatgcaaccaaaccatacaaggtccatgcaacagggttagcccagtagtaccatctccac 2994 Query: 347 ca 348 || Sbjct: 2993 ca 2992
>dbj|AB109388.1| Nicotiana tabacum NtPDR1 gene for PDR-type ABC transporter 1, complete cds Length = 11706 Score = 44.1 bits (22), Expect = 0.55 Identities = 52/62 (83%) Strand = Plus / Minus Query: 287 gatgcaacaacaccatagatggtccaagatactgggttggcccagtagtaccacctccac 346 |||||||| | |||||| | |||||| | || ||||| |||||||||||||| |||||| Sbjct: 11500 gatgcaaccaaaccatacaaggtccatgcaacagggttagcccagtagtaccatctccac 11441 Query: 347 ca 348 || Sbjct: 11440 ca 11439
>gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p, complete sequence Length = 185496 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 aagtttaagaacttgatggaat 125 |||||||||||||||||||||| Sbjct: 175878 aagtttaagaacttgatggaat 175899
>gb|AC087589.3| Homo sapiens chromosome 3 clone RP11-1102N22 map 3p, complete sequence Length = 181736 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 aagtttaagaacttgatggaat 125 |||||||||||||||||||||| Sbjct: 148857 aagtttaagaacttgatggaat 148836
>dbj|AB075550.1| Nicotiana tabacum NtPDR1 mRNA for pleiotropic drug resistance like protein, complete cds Length = 4674 Score = 44.1 bits (22), Expect = 0.55 Identities = 52/62 (83%) Strand = Plus / Minus Query: 287 gatgcaacaacaccatagatggtccaagatactgggttggcccagtagtaccacctccac 346 |||||||| | |||||| | |||||| | || ||||| |||||||||||||| |||||| Sbjct: 4321 gatgcaaccaaaccatacaaggtccatgcaacagggttagcccagtagtaccatctccac 4262 Query: 347 ca 348 || Sbjct: 4261 ca 4260
>ref|NM_126376.2| Arabidopsis thaliana unknown protein AT2G03250 mRNA, complete cds Length = 2271 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 agacgaagaagatgacaatgatgta 156 ||||||||||||| ||||||||||| Sbjct: 555 agacgaagaagatcacaatgatgta 579
>ref|NM_128248.1| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances AT2G26910 mRNA, complete cds Length = 4575 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 320 gggttggcccagtagtaccacctccacca 348 ||||| |||||||||||||| |||||||| Sbjct: 4031 gggtttgcccagtagtaccatctccacca 4003
>gb|DQ141107.1| Drosophila mojavensis Dscam gene, partial sequence Length = 75248 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 tttgtactacatatatacacatcacttca 74 |||||||||||| |||| ||||||||||| Sbjct: 10565 tttgtactacatctatatacatcacttca 10593
>gb|AY617628.1| Sterkiella histriomuscorum clone UGC1O0003_M09_F genomic sequence Length = 704 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 aagacgaagaagatgacaatgatgt 155 ||||||| ||||||||||||||||| Sbjct: 137 aagacgatgaagatgacaatgatgt 161
>ref|XM_954778.1| Neurospora crassa OR74A hypothetical protein (NCU05880.1) partial mRNA Length = 3780 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccaaagacgaagaagatgaca 148 ||||||||||||||||||||| Sbjct: 1064 ccaaagacgaagaagatgaca 1084
>ref|XM_325734.1| Neurospora crassa OR74A hypothetical protein (NCU05880.1) partial mRNA Length = 3780 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccaaagacgaagaagatgaca 148 ||||||||||||||||||||| Sbjct: 1064 ccaaagacgaagaagatgaca 1084
>gb|AY507958.1| Arabidopsis thaliana PHO1-like protein (PHO1;H6) mRNA, complete cds Length = 2271 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 agacgaagaagatgacaatgatgta 156 ||||||||||||| ||||||||||| Sbjct: 555 agacgaagaagatcacaatgatgta 579
>emb|CR717555.2|CNS0GGM1 Tetraodon nigroviridis full-length cDNA Length = 463 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 caaagacgaagaagatgacaatgat 153 ||||||||| ||||||||||||||| Sbjct: 403 caaagacgacgaagatgacaatgat 427
>emb|CR710398.2|CNS0GB3E Tetraodon nigroviridis full-length cDNA Length = 451 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 caaagacgaagaagatgacaatgat 153 ||||||||| ||||||||||||||| Sbjct: 391 caaagacgacgaagatgacaatgat 415
>emb|CR708227.2|CNS0G9F3 Tetraodon nigroviridis full-length cDNA Length = 767 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 caaagacgaagaagatgacaatgat 153 ||||||||| ||||||||||||||| Sbjct: 321 caaagacgacgaagatgacaatgat 345
>emb|CR707596.2|CNS0G8XK Tetraodon nigroviridis full-length cDNA Length = 840 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 caaagacgaagaagatgacaatgat 153 ||||||||| ||||||||||||||| Sbjct: 780 caaagacgacgaagatgacaatgat 804
>emb|CR857569.1| Pongo pygmaeus mRNA; cDNA DKFZp468J236 (from clone DKFZp468J236) Length = 1915 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 acgaagaagatgacaatgatg 154 ||||||||||||||||||||| Sbjct: 818 acgaagaagatgacaatgatg 838
>gb|AC005313.3| Arabidopsis thaliana chromosome 2 clone T18E12 map CIC11A04, complete sequence Length = 91318 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 agacgaagaagatgacaatgatgta 156 ||||||||||||| ||||||||||| Sbjct: 28169 agacgaagaagatcacaatgatgta 28193
>gb|AC005168.3| Arabidopsis thaliana chromosome 2 clone F12C20 map B68, complete sequence Length = 87978 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 320 gggttggcccagtagtaccacctccacca 348 ||||| |||||||||||||| |||||||| Sbjct: 16884 gggtttgcccagtagtaccatctccacca 16912
>tpg|BK001003.1| TPA: TPA_exp: Arabidopsis thaliana PDR4 ABC transporter (At2g29940) gene, complete cds Length = 6252 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 320 gggttggcccagtagtaccacctccacca 348 ||||| |||||||||||||| |||||||| Sbjct: 6020 gggtttgcccagtagtaccatctccacca 5992
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 aagacgaagaagatgacaatg 151 ||||||||||||||||||||| Sbjct: 20083957 aagacgaagaagatgacaatg 20083937 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 ccaccatggtcaccaaactgcgatgcaa 293 ||||||||||||||||||| | |||||| Sbjct: 4996308 ccaccatggtcaccaaacttctatgcaa 4996281
>gb|AF167433.1|AF167433 Thermus thermophilus gyrase B (gyrB) gene, complete cds Length = 1905 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 tggaggatgttgtagatgacctcca 608 |||||| |||||||||||||||||| Sbjct: 287 tggagggtgttgtagatgacctcca 263
>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa273B05 Length = 41326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 aagacgaagaagatgacaatg 151 ||||||||||||||||||||| Sbjct: 18883 aagacgaagaagatgacaatg 18863
>gb|AY305856.1| Macaca fascicularis histidine-rich calcium binding protein (HRC) mRNA, complete cds Length = 2182 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 acgaagaagatgacaatgatg 154 ||||||||||||||||||||| Sbjct: 875 acgaagaagatgacaatgatg 895
>ref|NM_105366.3| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances AT1G66950 mRNA, complete cds Length = 4557 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 326 gcccagtagtaccacctccaccaaatcggtat 357 |||||||||||||| |||||||| || ||||| Sbjct: 4164 gcccagtagtaccatctccaccatataggtat 4133
>gb|AF193810.1| Mus musculus Rh type C glycoprotein (Rhcg) mRNA, complete cds Length = 2097 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagagaaccaccatggtcac 278 |||||||||||||||||||| Sbjct: 199 aagagaaccaccatggtcac 180
>gb|AC165149.5| Mus musculus BAC clone RP24-114C10 from chromosome 13, complete sequence Length = 191162 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 actgtttgtactacatatat 61 |||||||||||||||||||| Sbjct: 108895 actgtttgtactacatatat 108876
>ref|XM_464576.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4335 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 3935 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 3884
>gb|AC102614.11| Mus musculus chromosome 8, clone RP23-421L10, complete sequence Length = 197194 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tacatatatacacatcactt 72 |||||||||||||||||||| Sbjct: 154517 tacatatatacacatcactt 154498
>gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035N09, complete sequence Length = 129468 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 266 ccaccatggtcaccaaactgcgatgcaa 293 ||||||||||||||||||| | |||||| Sbjct: 63501 ccaccatggtcaccaaacttctatgcaa 63528
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ggatgttgtagatgacctcc 607 |||||||||||||||||||| Sbjct: 122391 ggatgttgtagatgacctcc 122410
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aagacgaagaagatgacaatgatg 154 |||||| ||||||||||||||||| Sbjct: 38591 aagacgcagaagatgacaatgatg 38614
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ggatgttgtagatgacctcc 607 |||||||||||||||||||| Sbjct: 39777 ggatgttgtagatgacctcc 39796
>gb|AC102445.11| Mus musculus chromosome 14, clone RP24-196M4, complete sequence Length = 157416 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgtttgtactacatatatac 63 |||||||||||||||||||| Sbjct: 129409 tgtttgtactacatatatac 129428
>gb|AC158582.2| Mus musculus chromosome 7, clone RP24-173K12, complete sequence Length = 169636 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagagaaccaccatggtcac 278 |||||||||||||||||||| Sbjct: 140509 aagagaaccaccatggtcac 140490
>gb|AY077730.1| Podospora anserina Bck1-like MAP kinase kinase kinase (ask1) gene, complete cds Length = 6016 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agttatataacaacaaagct 20 |||||||||||||||||||| Sbjct: 5800 agttatataacaacaaagct 5781
>gb|AY254686.1| Mus musculus Rhesus associated C glycoprotein (Rhcg) mRNA, complete cds Length = 1541 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagagaaccaccatggtcac 278 |||||||||||||||||||| Sbjct: 83 aagagaaccaccatggtcac 64
>gb|AC005028.2| Homo sapiens BAC clone GS1-539F22 from 7, complete sequence Length = 189279 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccaaattatcctccaaaaat 223 |||||||||||||||||||| Sbjct: 103752 ccaaattatcctccaaaaat 103771
>ref|XR_002592.1| PREDICTED: Mus musculus hypothetical protein LOC669607 (LOC669607), mRNA Length = 1001 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 catcatgccgaacaatgtgaagta 483 |||||| ||||||||||||||||| Sbjct: 358 catcattccgaacaatgtgaagta 381
>ref|XR_002252.1| PREDICTED: Mus musculus hypothetical protein LOC668797 (LOC668797), mRNA Length = 1001 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 catcatgccgaacaatgtgaagta 483 |||||| ||||||||||||||||| Sbjct: 358 catcattccgaacaatgtgaagta 381
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tacatatatacacatcactt 72 |||||||||||||||||||| Sbjct: 26368 tacatatatacacatcactt 26349
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 326 gcccagtagtaccacctccaccaaatcggtat 357 |||||||||||||| |||||||| || ||||| Sbjct: 13929 gcccagtagtaccatctccaccatataggtat 13898
>emb|CR388064.10| Zebrafish DNA sequence from clone CH211-80E15 in linkage group 16, complete sequence Length = 119301 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 agtcaatgacaccaacatca 464 |||||||||||||||||||| Sbjct: 96445 agtcaatgacaccaacatca 96464
>gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, complete sequence Length = 192692 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ctagaagagaaccaccatgg 274 |||||||||||||||||||| Sbjct: 87883 ctagaagagaaccaccatgg 87864
>gb|U40953.1| Caenorhabditis elegans cosmid F53B1, complete sequence Length = 37476 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaagaagatgacaatgatgt 155 |||||||||||||||||||| Sbjct: 3752 gaagaagatgacaatgatgt 3771
>gb|AC142328.1| Pan troglodytes BAC clone RP43-24E4 from 7, complete sequence Length = 192006 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccaaattatcctccaaaaat 223 |||||||||||||||||||| Sbjct: 77023 ccaaattatcctccaaaaat 77004
>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence Length = 143015 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tacatatatacacatcactt 72 |||||||||||||||||||| Sbjct: 32251 tacatatatacacatcactt 32270
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aagacgaagaagatgacaatgatg 154 ||||||||||||||||| |||||| Sbjct: 171212 aagacgaagaagatgacgatgatg 171235
>gb|AF509740.1| Loofa yellow mosaic virus DNA-B, complete sequence Length = 2713 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 caaagacgaagaagatgaca 148 |||||||||||||||||||| Sbjct: 1142 caaagacgaagaagatgaca 1161
>emb|AL035467.23|HS288M22 Human DNA sequence from clone RP1-288M22 on chromosome 6q12-13 Contains a novel gene, the gene for a novel protein (FLJ13189) and a CpG Island, complete sequence Length = 155960 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 taacgtttttggaagtttaagaac 115 |||| ||||||||||||||||||| Sbjct: 25205 taacatttttggaagtttaagaac 25228
>ref|XM_963711.1| PREDICTED: Tribolium castaneum similar to CG10936-PA, isoform A (LOC657242), mRNA Length = 3633 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 tagtaccacctccaccaaatcggt 355 |||||||||| ||||||||||||| Sbjct: 2013 tagtaccaccaccaccaaatcggt 2036
>gb|AC020708.6| Homo sapiens BAC clone RP11-425B17 from 4, complete sequence Length = 208360 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 aaagacgaagaagatgacaa 149 |||||||||||||||||||| Sbjct: 48579 aaagacgaagaagatgacaa 48560
>ref|NM_019799.1| Mus musculus Rhesus blood group-associated C glycoprotein (Rhcg), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagagaaccaccatggtcac 278 |||||||||||||||||||| Sbjct: 199 aagagaaccaccatggtcac 180
>dbj|AK076757.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930433D02 product:Rhesus blood group-associated C glycoprotein, full insert sequence Length = 2084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagagaaccaccatggtcac 278 |||||||||||||||||||| Sbjct: 208 aagagaaccaccatggtcac 189
>ref|NM_075987.1| Caenorhabditis elegans F53B1.3 (F53B1.3) mRNA, complete cds Length = 363 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaagaagatgacaatgatgt 155 |||||||||||||||||||| Sbjct: 214 gaagaagatgacaatgatgt 233
>tpg|BK001010.1| TPA: TPA_exp: Arabidopsis thaliana PDR11 ABC transporter (At1g66950) gene, complete cds Length = 6223 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 326 gcccagtagtaccacctccaccaaatcggtat 357 |||||||||||||| |||||||| || ||||| Sbjct: 5988 gcccagtagtaccatctccaccatataggtat 5957
>emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in linkage group 23, complete sequence Length = 203127 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 agcttgcaataatgaagaac 508 |||||||||||||||||||| Sbjct: 16650 agcttgcaataatgaagaac 16631
>gb|AC098852.2| Homo sapiens BAC clone RP11-123E11 from 4, complete sequence Length = 193927 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ctactgtttgtactacatat 59 |||||||||||||||||||| Sbjct: 108947 ctactgtttgtactacatat 108928
>gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O24 genomic sequence, complete sequence Length = 35116 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 326 gcccagtagtaccacctccaccaaatcggtat 357 |||||||||||||| |||||||| || ||||| Sbjct: 1992 gcccagtagtaccatctccaccatataggtat 2023
>dbj|AP005969.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1119_C03 Length = 69710 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 ccaccatggtcaccaaactgcgatgcaa 293 ||||||||||||||||||| | |||||| Sbjct: 33769 ccaccatggtcaccaaacttctatgcaa 33742
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 39659 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 39608
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 95016 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 94965
>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16, complete sequence Length = 161603 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 agtcaatgacaccaacatca 464 |||||||||||||||||||| Sbjct: 153032 agtcaatgacaccaacatca 153051
>emb|AJ404328.1|NPL404328 Nicotiana plumbaginifolia mRNA for ABC1 protein Length = 4572 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 cccagtagtaccacctccaccaaatcgg 354 ||||||||||||| |||||||| ||||| Sbjct: 4160 cccagtagtaccatctccaccatatcgg 4133
>dbj|AK101855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069N21, full insert sequence Length = 4885 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 683 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 734
>dbj|AK073104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F20, full insert sequence Length = 3541 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 3187 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 3136
>dbj|AK064128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E08, full insert sequence Length = 1796 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 aagacgaagaagatgacaatgatg 154 |||||| ||||||||||||||||| Sbjct: 1428 aagacgcagaagatgacaatgatg 1451
>emb|AJ535048.1|OSA535048 Oryza sativa (japonica cultivar-group) pdr7 gene for PDR-like ABC transporter, exons 1-23 Length = 6409 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 500 atgaagaacatgaaatagaagaacttgtcaactttccagtcatatccaatca 551 |||||||||||| | ||||||| || |||||| |||||||| | ||||||| Sbjct: 5918 atgaagaacatgtaccagaagaatttttcaactgtccagtcaaagccaatca 5867
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 cccttggaggatgttgtaga 599 |||||||||||||||||||| Sbjct: 124118 cccttggaggatgttgtaga 124099
>emb|CT025535.14| Mouse DNA sequence from clone RP23-359O5 on chromosome 14, complete sequence Length = 193236 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtttgtactacatatatac 63 |||||||||||||||||||| Sbjct: 67413 tgtttgtactacatatatac 67394
>gb|AC114921.5| Mus musculus BAC clone RP23-202P9 from 6, complete sequence Length = 207908 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 cccttggaggatgttgtaga 599 |||||||||||||||||||| Sbjct: 204328 cccttggaggatgttgtaga 204309
>gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, complete sequence Length = 196013 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagagaaccaccatggtcac 278 |||||||||||||||||||| Sbjct: 76595 aagagaaccaccatggtcac 76576
>emb|AL845518.6| Mouse DNA sequence from clone RP23-300M9 on chromosome 2, complete sequence Length = 118632 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 catcatgccgaacaatgtgaagta 483 |||||| ||||||||||||||||| Sbjct: 61871 catcattccgaacaatgtgaagta 61848
>emb|AL713972.11| Mouse DNA sequence from clone RP23-305L4 on chromosome X, complete sequence Length = 201476 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tacatatatacacatcactt 72 |||||||||||||||||||| Sbjct: 92557 tacatatatacacatcactt 92576
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 aagaacatgaaatagaagaa 522 |||||||||||||||||||| Sbjct: 108096 aagaacatgaaatagaagaa 108077
>dbj|AP000945.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-870F11, complete sequences Length = 216975 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tgtactacatatatacacat 67 |||||||||||||||||||| Sbjct: 81164 tgtactacatatatacacat 81145 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,656,726 Number of Sequences: 3902068 Number of extensions: 5656726 Number of successful extensions: 124094 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123477 Number of HSP's gapped (non-prelim): 612 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
