| Clone Name | rbags3l09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016874.1| Zea mays clone Contig707 mRNA sequence Length = 1051 Score = 149 bits (75), Expect = 6e-33 Identities = 196/237 (82%), Gaps = 1/237 (0%) Strand = Plus / Plus Query: 34 tatatgccgatcttcttccnncncttctggatttgattcaagaagagccacgtcatcatg 93 |||||||||||||||||| ||||||||| ||||||||||| | ||| ||||||||| Sbjct: 350 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 409 Query: 94 acatgcggggcgancnnaacacaatatactggaaagccggagtagaacttaaatgggcca 153 ||||| || || | | || || || || || || || | ||||||||| ||||||||| Sbjct: 410 acatggggtgcaatcctgacgcagtacaccgggaaaccagtgtagaacttgaatgggcca 469 Query: 154 ccagtcttcatggtttgcatggcacagtccaaagacccagtgtatgggtacttttccagt 213 || |||| | ||| | || ||||||||||||||||| |||||||||||||| ||| | Sbjct: 470 ccgctcttgaaggtcttcacagcacagtccaaagaccctgtgtatgggtacttg-ccatt 528 Query: 214 ggcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaactgca 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 529 cgcatcaggttgcatcttctgaatctgtgtcttcacatagtcaaagggcaaactgca 585
>gb|BT016861.1| Zea mays clone Contig694 mRNA sequence Length = 1412 Score = 149 bits (75), Expect = 6e-33 Identities = 196/237 (82%), Gaps = 1/237 (0%) Strand = Plus / Plus Query: 34 tatatgccgatcttcttccnncncttctggatttgattcaagaagagccacgtcatcatg 93 |||||||||||||||||| ||||||||| ||||||||||| | ||| ||||||||| Sbjct: 354 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 413 Query: 94 acatgcggggcgancnnaacacaatatactggaaagccggagtagaacttaaatgggcca 153 ||||| || || | | || || || || || || || | ||||||||| ||||||||| Sbjct: 414 acatggggtgcaatcctgacgcagtacaccgggaaaccagtgtagaacttgaatgggcca 473 Query: 154 ccagtcttcatggtttgcatggcacagtccaaagacccagtgtatgggtacttttccagt 213 || |||| | ||| | || ||||||||||||||||| |||||||||||||| ||| | Sbjct: 474 ccgctcttgaaggtcttcacagcacagtccaaagaccctgtgtatgggtacttg-ccatt 532 Query: 214 ggcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaactgca 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 533 agcatcaggttgcatcttctgaatctgtgtcttcacatagtcaaagggcaaactgca 589
>dbj|AK071500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093C11, full insert sequence Length = 1425 Score = 149 bits (75), Expect = 6e-33 Identities = 208/253 (82%), Gaps = 1/253 (0%) Strand = Plus / Minus Query: 18 ctccaactggagatcttatatgccgatcttcttccnncncttctggatttgattcaagaa 77 ||||||||| ||| ||||||| || |||| |||| ||||||||||||||||||||| Sbjct: 1143 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 1084 Query: 78 gagccacgtcatcatgacatgcggggcgancnnaacacaatatactggaaagccggagta 137 | ||| |||||||| ||||| || || | | ||||| || || || ||||| | ||| Sbjct: 1083 tatccatgtcatcatcacatggggagcaatcctgacacagtacacagggaagccagtgta 1024 Query: 138 gaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagtgta 197 |||||| ||||||||||| |||| | ||| | |||||||||||||||||| || ||||| Sbjct: 1023 gaacttgaatgggccaccgctcttgaaggtcttcatggcacagtccaaagaaccggtgta 964 Query: 198 tgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataatcaa 257 |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 963 cgggtacttc-ccactggcatcaggttgcatcttctggatttgtgtcttcacatagtcaa 905 Query: 258 agggcaaactgca 270 | |||| |||||| Sbjct: 904 aaggcagactgca 892
>dbj|AK059612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F09, full insert sequence Length = 1359 Score = 149 bits (75), Expect = 6e-33 Identities = 208/253 (82%), Gaps = 1/253 (0%) Strand = Plus / Minus Query: 18 ctccaactggagatcttatatgccgatcttcttccnncncttctggatttgattcaagaa 77 ||||||||| ||| ||||||| || |||| |||| ||||||||||||||||||||| Sbjct: 1069 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 1010 Query: 78 gagccacgtcatcatgacatgcggggcgancnnaacacaatatactggaaagccggagta 137 | ||| |||||||| ||||| || || | | ||||| || || || ||||| | ||| Sbjct: 1009 tatccatgtcatcatcacatggggagcaatcctgacacagtacacagggaagccagtgta 950 Query: 138 gaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagtgta 197 |||||| ||||||||||| |||| | ||| | |||||||||||||||||| || ||||| Sbjct: 949 gaacttgaatgggccaccgctcttgaaggtcttcatggcacagtccaaagaaccggtgta 890 Query: 198 tgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataatcaa 257 |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 889 cgggtacttc-ccactggcatcaggttgcatcttctggatttgtgtcttcacatagtcaa 831 Query: 258 agggcaaactgca 270 | |||| |||||| Sbjct: 830 aaggcagactgca 818
>gb|AY103946.1| Zea mays PCO074099 mRNA sequence Length = 1530 Score = 149 bits (75), Expect = 6e-33 Identities = 196/237 (82%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 34 tatatgccgatcttcttccnncncttctggatttgattcaagaagagccacgtcatcatg 93 |||||||||||||||||| ||||||||| ||||||||||| | ||| ||||||||| Sbjct: 1089 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 1030 Query: 94 acatgcggggcgancnnaacacaatatactggaaagccggagtagaacttaaatgggcca 153 ||||| || || | | || || || || || || || | ||||||||| ||||||||| Sbjct: 1029 acatggggtgcaatcctgacgcagtacaccgggaaaccagtgtagaacttgaatgggcca 970 Query: 154 ccagtcttcatggtttgcatggcacagtccaaagacccagtgtatgggtacttttccagt 213 || |||| | ||| | || ||||||||||||||||| |||||||||||||| ||| | Sbjct: 969 ccgctcttgaaggtcttcacagcacagtccaaagaccctgtgtatgggtacttg-ccatt 911 Query: 214 ggcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaactgca 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 910 cgcatcaggttgcatcttctgaatctgtgtcttcacatagtcaaagggcaaactgca 854
>gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarate/malate translocator mRNA, complete cds; nuclear gene for mitochondrial product Length = 1416 Score = 141 bits (71), Expect = 1e-30 Identities = 195/237 (82%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 34 tatatgccgatcttcttccnncncttctggatttgattcaagaagagccacgtcatcatg 93 |||||||| ||||||||| ||||||||| ||||||||||| | ||| ||||||||| Sbjct: 1091 tatatgccaatcttcttctcaatcttctggatctgattcaagaatatccaggtcatcatg 1032 Query: 94 acatgcggggcgancnnaacacaatatactggaaagccggagtagaacttaaatgggcca 153 ||||| || || | | ||||| || || || || || | ||||||||| ||||| ||| Sbjct: 1031 acatggggtgcaatcctgacacagtacacggggaaaccagtgtagaacttgaatggacca 972 Query: 154 ccagtcttcatggtttgcatggcacagtccaaagacccagtgtatgggtacttttccagt 213 || |||| | ||| | || |||||||||||||||||| ||||| |||||||| ||| | Sbjct: 971 ccgctcttgaaggtcttcacggcacagtccaaagaccctgtgtacgggtacttg-ccatt 913 Query: 214 ggcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaactgca 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 912 cgcatcaggttgcatcttctgaatctgtgtcttcacatagtcaaagggcaaactgca 856
>dbj|AK103990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B11, full insert sequence Length = 871 Score = 141 bits (71), Expect = 1e-30 Identities = 207/253 (81%), Gaps = 1/253 (0%) Strand = Plus / Minus Query: 18 ctccaactggagatcttatatgccgatcttcttccnncncttctggatttgattcaagaa 77 ||||||||| ||| ||||||| || |||| |||| ||||||||||||||||||||| Sbjct: 590 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 531 Query: 78 gagccacgtcatcatgacatgcggggcgancnnaacacaatatactggaaagccggagta 137 | ||| |||||||| ||||| || || | | |||| || || || ||||| | ||| Sbjct: 530 tatccatgtcatcatcacatggggagcaatcctggcacagtacacagggaagccagtgta 471 Query: 138 gaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagtgta 197 |||||| ||||||||||| |||| | ||| | |||||||||||||||||| || ||||| Sbjct: 470 gaacttgaatgggccaccgctcttgaaggtcttcatggcacagtccaaagaaccggtgta 411 Query: 198 tgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataatcaa 257 |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 410 cgggtacttc-ccactggcatcaggttgcatcttctggatttgtgtcttcacatagtcaa 352 Query: 258 agggcaaactgca 270 | |||| |||||| Sbjct: 351 aaggcagactgca 339
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03 map S20262S, complete sequence Length = 149553 Score = 131 bits (66), Expect = 1e-27 Identities = 135/157 (85%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 124 ggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtcc 183 |||||||| | |||||||||||||||||| ||| |||||| ||| | ||||||||| || Sbjct: 82461 ggaaagccagtgtagaacttaaatgggcctccactcttcaaggtcttcatggcacaatca 82402 Query: 184 aaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgt 243 | ||||||||||||||| ||||| || | ||||||||| |||||||| ||||| ||||| Sbjct: 82401 agagacccagtgtatggatacttc-ccggaggcatcaggctgcatcttttgaatctgtgt 82343 Query: 244 tttcacataatcaaagggcaaactgcangcagccgca 280 ||||||||||||||||| |||||||| |||| |||| Sbjct: 82342 cttcacataatcaaagggtaaactgcaagcagacgca 82306
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 131 bits (66), Expect = 1e-27 Identities = 135/157 (85%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 124 ggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtcc 183 |||||||| | |||||||||||||||||| ||| |||||| ||| | ||||||||| || Sbjct: 13366108 ggaaagccagtgtagaacttaaatgggcctccactcttcaaggtcttcatggcacaatca 13366049 Query: 184 aaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgt 243 | ||||||||||||||| ||||| || | ||||||||| |||||||| ||||| ||||| Sbjct: 13366048 agagacccagtgtatggatacttc-ccggaggcatcaggctgcatcttttgaatctgtgt 13365990 Query: 244 tttcacataatcaaagggcaaactgcangcagccgca 280 ||||||||||||||||| |||||||| |||| |||| Sbjct: 13365989 cttcacataatcaaagggtaaactgcaagcagacgca 13365953
>dbj|AK068090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N13, full insert sequence Length = 1354 Score = 131 bits (66), Expect = 1e-27 Identities = 135/157 (85%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 124 ggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtcc 183 |||||||| | |||||||||||||||||| ||| |||||| ||| | ||||||||| || Sbjct: 996 ggaaagccagtgtagaacttaaatgggcctccactcttcaaggtcttcatggcacaatca 937 Query: 184 aaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgt 243 | ||||||||||||||| ||||| || | ||||||||| |||||||| ||||| ||||| Sbjct: 936 agagacccagtgtatggatacttc-ccggaggcatcaggctgcatcttttgaatctgtgt 878 Query: 244 tttcacataatcaaagggcaaactgcangcagccgca 280 ||||||||||||||||| |||||||| |||| |||| Sbjct: 877 cttcacataatcaaagggtaaactgcaagcagacgca 841
>dbj|AK058511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G08, full insert sequence Length = 1246 Score = 131 bits (66), Expect = 1e-27 Identities = 135/157 (85%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 124 ggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtcc 183 |||||||| | |||||||||||||||||| ||| |||||| ||| | ||||||||| || Sbjct: 879 ggaaagccagtgtagaacttaaatgggcctccactcttcaaggtcttcatggcacaatca 820 Query: 184 aaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgt 243 | ||||||||||||||| ||||| || | ||||||||| |||||||| ||||| ||||| Sbjct: 819 agagacccagtgtatggatacttc-ccggaggcatcaggctgcatcttttgaatctgtgt 761 Query: 244 tttcacataatcaaagggcaaactgcangcagccgca 280 ||||||||||||||||| |||||||| |||| |||| Sbjct: 760 cttcacataatcaaagggtaaactgcaagcagacgca 724
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 131 bits (66), Expect = 1e-27 Identities = 135/157 (85%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 124 ggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtcc 183 |||||||| | |||||||||||||||||| ||| |||||| ||| | ||||||||| || Sbjct: 13446287 ggaaagccagtgtagaacttaaatgggcctccactcttcaaggtcttcatggcacaatca 13446228 Query: 184 aaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgt 243 | ||||||||||||||| ||||| || | ||||||||| |||||||| ||||| ||||| Sbjct: 13446227 agagacccagtgtatggatacttc-ccggaggcatcaggctgcatcttttgaatctgtgt 13446169 Query: 244 tttcacataatcaaagggcaaactgcangcagccgca 280 ||||||||||||||||| |||||||| |||| |||| Sbjct: 13446168 cttcacataatcaaagggtaaactgcaagcagacgca 13446132
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 119 bits (60), Expect = 5e-24 Identities = 118/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 135 gtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagt 194 ||||||||| ||||||||||| |||| | ||| | |||||||||||||||||| || || Sbjct: 53101 gtagaacttgaatgggccaccgctcttgaaggtcttcatggcacagtccaaagaaccggt 53042 Query: 195 gtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataat 254 ||| |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| | Sbjct: 53041 gtacgggtacttc-ccactggcatcaggttgcatcttctggatttgtgtcttcacatagt 52983 Query: 255 caaagggcaaactgca 270 |||| |||| |||||| Sbjct: 52982 caaaaggcagactgca 52967 Score = 48.1 bits (24), Expect = 0.015 Identities = 60/73 (82%) Strand = Plus / Minus Query: 18 ctccaactggagatcttatatgccgatcttcttccnncncttctggatttgattcaagaa 77 ||||||||| ||| ||||||| || |||| |||| ||||||||||||||||||||| Sbjct: 53309 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 53250 Query: 78 gagccacgtcatc 90 | ||| |||||| Sbjct: 53249 tatccatgtcatc 53237
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 119 bits (60), Expect = 5e-24 Identities = 118/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 135 gtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagt 194 ||||||||| ||||||||||| |||| | ||| | |||||||||||||||||| || || Sbjct: 6615047 gtagaacttgaatgggccaccgctcttgaaggtcttcatggcacagtccaaagaaccggt 6614988 Query: 195 gtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataat 254 ||| |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| | Sbjct: 6614987 gtacgggtacttc-ccactggcatcaggttgcatcttctggatttgtgtcttcacatagt 6614929 Query: 255 caaagggcaaactgca 270 |||| |||| |||||| Sbjct: 6614928 caaaaggcagactgca 6614913 Score = 48.1 bits (24), Expect = 0.015 Identities = 60/73 (82%) Strand = Plus / Minus Query: 18 ctccaactggagatcttatatgccgatcttcttccnncncttctggatttgattcaagaa 77 ||||||||| ||| ||||||| || |||| |||| ||||||||||||||||||||| Sbjct: 6615255 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 6615196 Query: 78 gagccacgtcatc 90 | ||| |||||| Sbjct: 6615195 tatccatgtcatc 6615183
>dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 2371 Score = 117 bits (59), Expect = 2e-23 Identities = 179/219 (81%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 57 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgancnnaacaca 116 ||||||||| ||||||||||| | ||| |||| |||||||||||| || | | ||||| Sbjct: 2040 cttctggatctgattcaagaatatccaggtcaacatgacatgcggagcaatcctcacaca 1981 Query: 117 atatactggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggc 176 || || ||||| |||| |||||||||||| ||||| ||| |||| | ||| | ||| | Sbjct: 1980 gtagacaggaaacccggtgtagaacttaaacgggcctccactctttaaggtcttcataac 1921 Query: 177 acagtccaaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaa 236 ||||| | || |||||||| |||||||| ||| |||||||||| ||||||||||||| Sbjct: 1920 gcagtcaagggatccagtgtacgggtacttc-ccattggcatcaggctgcatcttctgaa 1862 Query: 237 tttgtgttttcacataatcaaagggcaaactgcangcag 275 | || || ||||||||||| |||||||||||||| |||| Sbjct: 1861 tctgcgtcttcacataatcgaagggcaaactgcaggcag 1823
>dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1783 Score = 109 bits (55), Expect = 5e-21 Identities = 178/219 (81%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 57 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgancnnaacaca 116 ||||||||| ||||||||||| | ||| |||| ||||||||| || | | | ||||| Sbjct: 1493 cttctggatctgattcaagaatatccaagtcaacatgacatgtggaccaatcctcacaca 1434 Query: 117 atatactggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggc 176 || || ||||| |||| |||||||||||| ||||| ||| |||| | ||| | |||| | Sbjct: 1433 gtagacaggaaacccggtgtagaacttaaacgggcctccactctttaaggtcttcatgac 1374 Query: 177 acagtccaaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaa 236 ||||| | ||| |||||||| |||||||| ||| |||||||||| ||||||||||||| Sbjct: 1373 gcagtcaagagatccagtgtacgggtacttc-ccattggcatcaggctgcatcttctgaa 1315 Query: 237 tttgtgttttcacataatcaaagggcaaactgcangcag 275 | || || ||||||||||| || ||||||||||| |||| Sbjct: 1314 tctgcgtcttcacataatcgaaaggcaaactgcaggcag 1276
>dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1446 Score = 109 bits (55), Expect = 5e-21 Identities = 178/219 (81%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 57 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgancnnaacaca 116 ||||||||| ||||||||||| | ||| |||| ||||||||| || | | | ||||| Sbjct: 1020 cttctggatctgattcaagaatatccaagtcaacatgacatgtggaccaatcctcacaca 961 Query: 117 atatactggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggc 176 || || ||||| |||| |||||||||||| ||||| ||| |||| | ||| | |||| | Sbjct: 960 gtagacaggaaacccggtgtagaacttaaacgggcctccactctttaaggtcttcatgac 901 Query: 177 acagtccaaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttctgaa 236 ||||| | ||| |||||||| |||||||| ||| |||||||||| ||||||||||||| Sbjct: 900 gcagtcaagagatccagtgtacgggtacttc-ccattggcatcaggctgcatcttctgaa 842 Query: 237 tttgtgttttcacataatcaaagggcaaactgcangcag 275 | || || ||||||||||| || ||||||||||| |||| Sbjct: 841 tctgcgtcttcacataatcgaaaggcaaactgcaggcag 803
>gb|AY700673.1| Helianthus tuberosus putative dicarboxylate/tricarboxylate carrier mRNA, partial cds Length = 669 Score = 107 bits (54), Expect = 2e-20 Identities = 156/190 (82%), Gaps = 1/190 (0%) Strand = Plus / Minus Query: 87 catcatgacatgcggggcgancnnaacacaatatactggaaagccggagtagaacttaaa 146 ||||||||| || || |||| | |||||||||||||||||| || | |||||||| || Sbjct: 669 catcatgacgtggggagcgatcctaacacaatatactggaaatcctgtatagaacttgaa 610 Query: 147 tgggccaccagtcttcatggtttgcatggcacagtccaaagacccagtgtatgggtactt 206 || ||||||| ||| | ||||| ||||||||| |||| ||| || ||||| || || || Sbjct: 609 gggcccaccagacttgagggttttcatggcacaatccatagatcctgtgtacggata-tt 551 Query: 207 ttccagtggcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaac 266 |||| | |||||||| ||||| || || ||||| ||||||||||||||||| ||||||| Sbjct: 550 ttcccgcagcatcaggctgcattttttgtatttgagttttcacataatcaaacggcaaac 491 Query: 267 tgcangcagc 276 |||| ||||| Sbjct: 490 tgcatgcagc 481
>gb|AF010583.1|AF010583 Oryza sativa 2-oxoglutarate/malate translocator mRNA, partial cds Length = 949 Score = 101 bits (51), Expect = 1e-18 Identities = 120/142 (84%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 139 aacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagtgtat 198 ||||||||||||| ||| |||||| ||||| ||||||||| || | ||||||||||||| Sbjct: 551 aacttaaatgggcgtccactcttcaaggttttcatggcacaatcaagagacccagtgtat 492 Query: 199 gggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataatcaaa 258 || ||| || || | ||||||||| |||||||| |||| ||||| |||||||||||||| Sbjct: 491 ggatac-ttcccggaggcatcaggctgcatctttggaatctgtgtcttcacataatcaaa 433 Query: 259 gggcaaactgcangcagccgca 280 ||| ||| |||| |||| |||| Sbjct: 432 gggtaaaatgcaagcagacgca 411
>gb|AY428798.1| Citrus junos dicarboxylate/tricarboxylate carrier (dtc) mRNA, complete cds; mitochondrial Length = 1503 Score = 99.6 bits (50), Expect = 5e-18 Identities = 108/126 (85%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 145 aatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagtgtatgggtac 204 ||||| ||||||| ||| | ||||| |||||||||||||| ||| || |||||||| ||| Sbjct: 1260 aatggtccaccagccttgagggttttcatggcacagtccatagagcctgtgtatggatac 1201 Query: 205 ttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaa 264 ||| | | | |||| |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 1200 tttccttgag-catctggttgcattttctgaatttgtgttttgacataatcaaagggtaa 1142 Query: 265 actgca 270 |||||| Sbjct: 1141 actgca 1136
>gb|AC148177.13| Medicago truncatula clone mth2-4c9, complete sequence Length = 117329 Score = 97.6 bits (49), Expect = 2e-17 Identities = 86/97 (88%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 174 ggcacagtccaaagacccagtgtatgggtacttttccagtggcatcaggttgcatcttct 233 ||||||||| | ||| |||||||||||||| |||||| ||||||||||||||||||| Sbjct: 12302 ggcacagtcaagagaaccagtgtatgggta-ttttccttcagcatcaggttgcatcttct 12244 Query: 234 gaatttgtgttttcacataatcaaagggcaaactgca 270 |||| ||||| |||||||||||||| ||||||||||| Sbjct: 12243 gaatctgtgtcttcacataatcaaatggcaaactgca 12207
>gb|BT013008.1| Lycopersicon esculentum clone 114243R, mRNA sequence Length = 1356 Score = 83.8 bits (42), Expect = 3e-13 Identities = 162/202 (80%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 75 gaagagccacgtcatcatgacatgcggggcgancnnaacacaatatactggaaagccgga 134 ||||| ||| |||||||| ||||| ||||| | | |||||||||||||||||| || | Sbjct: 975 gaagatccaagtcatcataacatgaggggcaatcctaacacaatatactggaaatccagt 916 Query: 135 gtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagt 194 |||||| || || || || || ||||||| || | ||||||||| || ||||| ||||| Sbjct: 915 gtagaatttgaagggtcctcctgtcttcaaagtcttcatggcacaatcgaaagaaccagt 856 Query: 195 gtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataat 254 ||| ||| | |||||| ||||| |||||||| |||||||| || || ||||| |||| Sbjct: 855 gta-gggcaattttccttcagcatctggttgcattttctgaatctgggtcttcacgtaat 797 Query: 255 caaagggcaaactgcangcagc 276 |||| || |||||||| ||||| Sbjct: 796 caaatggtaaactgcaagcagc 775
>gb|DQ056436.1| Lycopersicon esculentum oxoglutarate/malate translocator (ACI36) mRNA, complete cds Length = 1339 Score = 83.8 bits (42), Expect = 3e-13 Identities = 162/202 (80%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 75 gaagagccacgtcatcatgacatgcggggcgancnnaacacaatatactggaaagccgga 134 ||||| ||| |||||||| ||||| ||||| | | |||||||||||||||||| || | Sbjct: 879 gaagatccaagtcatcataacatgaggggcaatcctaacacaatatactggaaatccagt 820 Query: 135 gtagaacttaaatgggccaccagtcttcatggtttgcatggcacagtccaaagacccagt 194 |||||| || || || || || ||||||| || | ||||||||| || ||||| ||||| Sbjct: 819 gtagaatttgaagggtcctcctgtcttcaaagtcttcatggcacaatcgaaagaaccagt 760 Query: 195 gtatgggtacttttccagtggcatcaggttgcatcttctgaatttgtgttttcacataat 254 ||| ||| | |||||| ||||| |||||||| |||||||| || || ||||| |||| Sbjct: 759 gta-gggcaattttccttcagcatctggttgcattttctgaatctgggtcttcacgtaat 701 Query: 255 caaagggcaaactgcangcagc 276 |||| || |||||||| ||||| Sbjct: 700 caaatggtaaactgcaagcagc 679
>emb|AJ311778.1|NTA311778 Nicotiana tabacum mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc3 gene) Length = 1144 Score = 75.8 bits (38), Expect = 7e-11 Identities = 176/221 (79%), Gaps = 3/221 (1%) Strand = Plus / Minus Query: 57 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgancnnaacaca 116 |||||||||||| || | ||| | |||||||||||||||||| || || | | |||||| Sbjct: 903 cttctggatttggttaaggaatatccacgtcatcatgacatgaggcgcaatcctaacaca 844 Query: 117 atatactggaaagccggagtagaacttaaatgggccaccagtcttcatggtttgcatggc 176 |||||||||||| || | |||||| || || ||||| || | |||| |||| |||||| Sbjct: 843 atatactggaaatccagtgtagaatttgaaggggcctcctgatttcaaagttttcatggc 784 Query: 177 acagtccaaagacccagtgtatgggtacttttccagtg-gcatcaggttgcatcttctga 235 ||| || || || || ||||| || || ||||| || ||||| || ||||| |||||| Sbjct: 783 acaatcgaatgaaccggtgtagggata--tttcccttgagcatctggctgcattttctga 726 Query: 236 atttgtgttttcacataatcaaagggcaaactgcangcagc 276 || || ||||| ||||||||||| || |||||||| ||||| Sbjct: 725 atctgggttttgacataatcaaatggtaaactgcaagcagc 685
>emb|AJ311779.1|NTA311779 Nicotiana tabacum partial mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc4 gene) Length = 908 Score = 69.9 bits (35), Expect = 4e-09 Identities = 62/72 (86%) Strand = Plus / Minus Query: 57 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgancnnaacaca 116 |||||||||||| || | ||| | |||||||||||||||||| ||||| | | |||||| Sbjct: 658 cttctggatttggttaaggaatatccacgtcatcatgacatgaggggcaatcctaacaca 599 Query: 117 atatactggaaa 128 |||||||||||| Sbjct: 598 atatactggaaa 587 Score = 61.9 bits (31), Expect = 1e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 215 gcatcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaactgcangca 274 ||||| || ||||| |||||||| || ||||||||||||||||| || |||||||| ||| Sbjct: 501 gcatctggctgcattttctgaatctgggttttcacataatcaaacggtaaactgcaagca 442 Query: 275 gc 276 || Sbjct: 441 gc 440
>gb|AC139746.15| Medicago truncatula clone mth2-17b20, complete sequence Length = 118157 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 catcaggttgcatcttctgaattt 239 |||||||||||||||||| ||||| Sbjct: 84156 catcaggttgcatcttcttaattt 84179 Score = 40.1 bits (20), Expect = 3.7 Identities = 49/59 (83%) Strand = Plus / Plus Query: 218 tcaggttgcatcttctgaatttgtgttttcacataatcaaagggcaaactgcangcagc 276 |||||||||||||| | |||||| || ||||||| ||||| || ||||| || ||||| Sbjct: 79581 tcaggttgcatcttgttaatttgaattatcacatattcaaatggtaaactacaagcagc 79639
>emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in linkage group 5, complete sequence Length = 227940 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cacagtccaaagacccagtg 195 |||||||||||||||||||| Sbjct: 55788 cacagtccaaagacccagtg 55769
>emb|AJ299250.1|NTA299250 Nicotiana tabacum mRNA for mitochondrial 2-oxoglutarate/malate carrier (momc1 gene) Length = 1297 Score = 40.1 bits (20), Expect = 3.7 Identities = 41/49 (83%) Strand = Plus / Minus Query: 85 gtcatcatgacatgcggggcgancnnaacacaatatactggaaagccgg 133 |||||||| ||||| || || | | |||||||||||||||||| |||| Sbjct: 915 gtcatcataacatgaggagcaatcctaacacaatatactggaaatccgg 867
>emb|AJ311777.1|NTA311777 Nicotiana tabacum partial mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc2 gene) Length = 1193 Score = 40.1 bits (20), Expect = 3.7 Identities = 41/49 (83%) Strand = Plus / Minus Query: 85 gtcatcatgacatgcggggcgancnnaacacaatatactggaaagccgg 133 |||||||| ||||| || || | | |||||||||||||||||| |||| Sbjct: 836 gtcatcataacatgaggagcaatcctaacacaatatactggaaatccgg 788 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,193,434 Number of Sequences: 3902068 Number of extensions: 2193434 Number of successful extensions: 62307 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62201 Number of HSP's gapped (non-prelim): 78 length of query: 280 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 258 effective length of database: 17,147,199,772 effective search space: 4423977541176 effective search space used: 4423977541176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)