>ref|NM_185403.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1070

 Score =  321 bits (162), Expect = 2e-84
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
           |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 755 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 696

                                                                       
Query: 541 tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccctc 600
           ||| |||||||| || |||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 695 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccctc 636

                                                                       
Query: 601 catatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacatatc 660
           |||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 635 catatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagacatatc 576

                                                                       
Query: 661 tagagaatcaccagttgacagcttcccaaccttcaaattgagttctttcactatattttg 720
           ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| || |
Sbjct: 575 tagagaatcgccagttgagagcttcccaaccttcaaattgagttccttcaatata-ttag 517

                                             
Query: 721 gggtttcaaatgtttttctcgctccaattccata 754
           ||||  ||||||||||||  | ||||||||||||
Sbjct: 516 gggtagcaaatgtttttcgtgttccaattccata 483

>dbj|AB110165.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 12FPG037
          Length = 1103

 Score =  321 bits (162), Expect = 2e-84
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
           |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 719 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 660

                                                                       
Query: 541 tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccctc 600
           ||| |||||||| || |||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 659 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccctc 600

                                                                       
Query: 601 catatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacatatc 660
           |||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 599 catatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagacatatc 540

                                                                       
Query: 661 tagagaatcaccagttgacagcttcccaaccttcaaattgagttctttcactatattttg 720
           ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| || |
Sbjct: 539 tagagaatcgccagttgagagcttcccaaccttcaaattgagttccttcaatata-ttag 481

                                             
Query: 721 gggtttcaaatgtttttctcgctccaattccata 754
           ||||  ||||||||||||  | ||||||||||||
Sbjct: 480 gggtagcaaatgtttttcgtgttccaattccata 447

>gb|AF458088.1|AF458088 Oryza sativa methylthioadenosine/S-adenosyl homocysteine
           nucleosidase mRNA, complete cds
          Length = 1227

 Score =  321 bits (162), Expect = 2e-84
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
           |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 755 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 696

                                                                       
Query: 541 tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccctc 600
           ||| |||||||| || |||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 695 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccctc 636

                                                                       
Query: 601 catatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacatatc 660
           |||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 635 catatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagacatatc 576

                                                                       
Query: 661 tagagaatcaccagttgacagcttcccaaccttcaaattgagttctttcactatattttg 720
           ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| || |
Sbjct: 575 tagagaatcgccagttgagagcttcccaaccttcaaattgagttccttcaatata-ttag 517

                                             
Query: 721 gggtttcaaatgtttttctcgctccaattccata 754
           ||||  ||||||||||||  | ||||||||||||
Sbjct: 516 gggtagcaaatgtttttcgtgttccaattccata 483

>dbj|AK104797.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H06, full
           insert sequence
          Length = 1070

 Score =  321 bits (162), Expect = 2e-84
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
           |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 755 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 696

                                                                       
Query: 541 tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccctc 600
           ||| |||||||| || |||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 695 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccctc 636

                                                                       
Query: 601 catatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacatatc 660
           |||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 635 catatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagacatatc 576

                                                                       
Query: 661 tagagaatcaccagttgacagcttcccaaccttcaaattgagttctttcactatattttg 720
           ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| || |
Sbjct: 575 tagagaatcgccagttgagagcttcccaaccttcaaattgagttccttcaatata-ttag 517

                                             
Query: 721 gggtttcaaatgtttttctcgctccaattccata 754
           ||||  ||||||||||||  | ||||||||||||
Sbjct: 516 gggtagcaaatgtttttcgtgttccaattccata 483

>dbj|AK104481.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G11, full
           insert sequence
          Length = 1121

 Score =  321 bits (162), Expect = 2e-84
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
           |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 755 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 696

                                                                       
Query: 541 tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccctc 600
           ||| |||||||| || |||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 695 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccctc 636

                                                                       
Query: 601 catatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacatatc 660
           |||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 635 catatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagacatatc 576

                                                                       
Query: 661 tagagaatcaccagttgacagcttcccaaccttcaaattgagttctttcactatattttg 720
           ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| || |
Sbjct: 575 tagagaatcgccagttgagagcttcccaaccttcaaattgagttccttcaatata-ttag 517

                                             
Query: 721 gggtttcaaatgtttttctcgctccaattccata 754
           ||||  ||||||||||||  | ||||||||||||
Sbjct: 516 gggtagcaaatgtttttcgtgttccaattccata 483

>dbj|AK066172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056A05, full
           insert sequence
          Length = 1140

 Score =  321 bits (162), Expect = 2e-84
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
           |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 777 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 718

                                                                       
Query: 541 tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccctc 600
           ||| |||||||| || |||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 717 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccctc 658

                                                                       
Query: 601 catatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacatatc 660
           |||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 657 catatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagacatatc 598

                                                                       
Query: 661 tagagaatcaccagttgacagcttcccaaccttcaaattgagttctttcactatattttg 720
           ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||| || |
Sbjct: 597 tagagaatcgccagttgagagcttcccaaccttcaaattgagttccttcaatata-ttag 539

                                             
Query: 721 gggtttcaaatgtttttctcgctccaattccata 754
           ||||  ||||||||||||  | ||||||||||||
Sbjct: 538 gggtagcaaatgtttttcgtgttccaattccata 505

>gb|AY106448.1| Zea mays PCO149605 mRNA sequence
          Length = 796

 Score =  161 bits (81), Expect = 4e-36
 Identities = 196/233 (84%), Gaps = 1/233 (0%)
 Strand = Plus / Minus

                                                                       
Query: 479 atcaggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcaca 538
           |||||||| |||||||||||||| | |||||||||||||||||| || || || ||||| 
Sbjct: 446 atcaggttctgcagaaactcctcagatgttggcttctccccatccacgatatcagtcacg 387

                                                                       
Query: 539 gctttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccc 598
           ||||| |||||||| || || ||||| |||| ||| || ||||| ||||| || ||||||
Sbjct: 386 gctttcacaaagatcgctggcgttgaaaacatgtcggcgacatatgccacagcagctccc 327

                                                                       
Query: 599 tccatatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagacata 658
           ||||||||||| |||||||| ||||||||||||||  |   |||||| || |||||||||
Sbjct: 326 tccatatcctttactgtagcatcattgctcagtatcaccttctcatcctggggagacata 267

                                                                
Query: 659 t-ctagagaatcaccagttgacagcttcccaaccttcaaattgagttctttca 710
           | | |||||||| ||||| ||||  || |||| ||||||||||||||| ||||
Sbjct: 266 tcccagagaatccccagtcgacaatttgccaatcttcaaattgagttccttca 214

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  149 bits (75), Expect = 2e-32
 Identities = 108/119 (90%)
 Strand = Plus / Minus

                                                                          
Query: 481    caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
              |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 694293 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 694234

                                                                         
Query: 541    tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccct 599
              ||| |||||||| || |||||||| |||| |||||||||||| |||||||| |||||||
Sbjct: 694233 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccct 694175



 Score =  135 bits (68), Expect = 2e-28
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                          
Query: 597    cctccatatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagaca 656
              |||||||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||
Sbjct: 693793 cctccatatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagaca 693734

                                                  
Query: 657    tatctagagaatcaccagttgacagcttcccaacct 692
              ||||||||||||| |||||||| |||||||||||||
Sbjct: 693733 tatctagagaatcgccagttgagagcttcccaacct 693698



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 689    accttcaaattgagttctttcactatattttggggtttcaaatgtttttctcgctccaat 748
              ||||||||||||||||| |||| |||| || |||||  ||||||||||||  | ||||||
Sbjct: 693476 accttcaaattgagttccttcaatata-ttaggggtagcaaatgtttttcgtgttccaat 693418

                    
Query: 749    tccata 754
              ||||||
Sbjct: 693417 tccata 693412

>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC
              clone:P0029D06
          Length = 150120

 Score =  149 bits (75), Expect = 2e-32
 Identities = 108/119 (90%)
 Strand = Plus / Minus

                                                                          
Query: 481    caggttttgcagaaactcctcggctgttggcttctccccatcaacaatgtcggtcacagc 540
              |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 100721 caggttctgcagaaactcctcggctgttggtttctccccatcaacaatatcagtcacagc 100662

                                                                         
Query: 541    tttgacaaagatagcgggtgttgagaacaagtcagcaacataagccaccgctgctccct 599
              ||| |||||||| || |||||||| |||| |||||||||||| |||||||| |||||||
Sbjct: 100661 tttcacaaagattgccggtgttgaaaacatgtcagcaacatatgccaccgcggctccct 100603



 Score =  135 bits (68), Expect = 2e-28
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                          
Query: 597    cctccatatccttgactgtagcttcattgctcagtattgctgactcatcatgaggagaca 656
              |||||||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||
Sbjct: 100221 cctccatatccttgactgtagcatcattgttcaatattgctgactcgtcatggggagaca 100162

                                                  
Query: 657    tatctagagaatcaccagttgacagcttcccaacct 692
              ||||||||||||| |||||||| |||||||||||||
Sbjct: 100161 tatctagagaatcgccagttgagagcttcccaacct 100126



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                         
Query: 689   accttcaaattgagttctttcactatattttggggtttcaaatgtttttctcgctccaat 748
             ||||||||||||||||| |||| |||| || |||||  ||||||||||||  | ||||||
Sbjct: 99904 accttcaaattgagttccttcaatata-ttaggggtagcaaatgtttttcgtgttccaat 99846

                   
Query: 749   tccata 754
             ||||||
Sbjct: 99845 tccata 99840

>ref|NM_119650.2| Arabidopsis thaliana catalytic AT4G34840 mRNA, complete cds
          Length = 1062

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 572 tcagcaacataagccaccgctgctccctccatatccttgactgtagcttcatt 624
           ||||| ||||| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 614 tcagccacataggccactgctgctccctccatatctttaactgtagcatcatt 562

>gb|BT012099.1| Arabidopsis thaliana At4g34840 mRNA sequence
          Length = 600

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 572 tcagcaacataagccaccgctgctccctccatatccttgactgtagcttcatt 624
           ||||| ||||| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 428 tcagccacataggccactgctgctccctccatatctttaactgtagcatcatt 376

>gb|BT010195.1| Arabidopsis thaliana At4g34840 gene, complete cds
          Length = 765

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 572 tcagcaacataagccaccgctgctccctccatatccttgactgtagcttcatt 624
           ||||| ||||| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 593 tcagccacataggccactgctgctccctccatatctttaactgtagcatcatt 541

>emb|AJ237993.1|VVI237993 Vitis vinifera mRNA for putative ripening-related protein (grip58
           gene)
          Length = 1154

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 593 gctccctccatatccttgactgtagcttcattgctcagtattgctgactcatcatgagga 652
           ||||||||||| || |||||||||||  ||||   ||  |||| ||| |||||||| |||
Sbjct: 720 gctccctccatgtctttgactgtagcaccatttgccaaaattgatgattcatcatgtgga 661

                            
Query: 653 gacatatctagagaatc 669
           |||||||||| ||||||
Sbjct: 660 gacatatctaaagaatc 644

>gb|AC099710.8| Mus musculus, clone RP23-366C6, complete sequence
          Length = 225122

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 703   ttctttcactatattttggggtttc 727
             |||||||||||||||| ||||||||
Sbjct: 83484 ttctttcactatatttgggggtttc 83460

>emb|AL354935.23| Human DNA sequence from clone RP11-117L14 on chromosome 9 Contains the 5'
              end of the RNF38 gene for ring finger protein 38 and a CpG
              island, complete sequence
          Length = 121826

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     tgcctttactagtcctgattt 46
              |||||||||||||||||||||
Sbjct: 101193 tgcctttactagtcctgattt 101173

>gb|AC022432.5| Homo sapiens chromosome 19 clone CTD-3030D20, complete sequence
          Length = 102223

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 39    cctgatttggaaagtattcattgctcact 67
             ||||||||| ||| |||||||||||||||
Sbjct: 62127 cctgatttgcaaattattcattgctcact 62099

>gb|AC138973.2| Homo sapiens 3 BAC CTD-2532M17 (Cal Tech Human BAC Library D) complete
             sequence
          Length = 142430

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 714   tattttggggtttcaaatgtt 734
             |||||||||||||||||||||
Sbjct: 98164 tattttggggtttcaaatgtt 98144

>emb|AL731695.11| Mouse DNA sequence from clone RP23-188M14 on chromosome X, complete
              sequence
          Length = 177098

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 703    ttctttcactatattttggggtttc 727
              |||||||||||||||| ||||||||
Sbjct: 168578 ttctttcactatatttgggggtttc 168554

>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
              sequence
          Length = 224038

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 644    tcatgaggagacatatctagagaat 668
              |||||||||||||||| ||||||||
Sbjct: 150045 tcatgaggagacatatgtagagaat 150069


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,998,745
Number of Sequences: 3902068
Number of extensions: 6998745
Number of successful extensions: 125260
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125160
Number of HSP's gapped (non-prelim): 90
length of query: 764
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 741
effective length of database: 17,143,297,704
effective search space: 12703183598664
effective search space used: 12703183598664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)