>IF2_PSEPK (Q88DV7) Translation initiation factor IF-2|
          Length = 846

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 55  RTSNSNKQRINNGRGDQSEIKKKSXHGIQMDQG 153
           RT++        GRG +S++KK++ HG Q   G
Sbjct: 229 RTTDEESDGARRGRGGKSKLKKRNQHGFQNPTG 261

>IF2_ENTFC (P18311) Translation initiation factor IF-2|
          Length = 784

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 49  QXRTSNSNKQRINNGRGDQSEIKKKSXHGIQMDQGNPSYNHSNTRGT 189
           Q +  ++N+ R NNG G+    +  +  G Q  QG+    + N +G+
Sbjct: 103 QGKNQSTNQNRSNNGGGNNQNRQGATQSGNQNRQGSTQGGNQNRQGS 149

>CADHO_XENLA (P33147) Neural-cadherin 2 precursor (N-cadherin 2)|
          Length = 906

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 148 QGNPSYNHSNTRGTMIAAYSVQDAP 222
           +GNP+Y  SNT   +IA   V D P
Sbjct: 356 EGNPTYGLSNTATAVIAVTDVNDNP 380

>CADHN_XENLA (P20310) Neural-cadherin 1 precursor (N-cadherin 1)|
          Length = 905

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 148 QGNPSYNHSNTRGTMIAAYSVQDAP 222
           +GNP+Y  SNT   +IA   V D P
Sbjct: 356 EGNPTYGLSNTATAVIAVTDVNDNP 380

>DBF4_YEAST (P32325) Protein DBF4 (Protein DNA52)|
          Length = 704

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 67  SNKQRINNGRGDQSEIKKKSXHGIQMDQGNPSYNHSNTRGTMIAAYSVQDAPRINRSTEL 246
           SN    NN    +S  KK+S   +++ Q    + H   R  +  A S++ A ++++ T L
Sbjct: 40  SNDNNCNNNNTTESFPKKRSLERLELQQ--QQHLHEKKRARIERARSIEGAVQVSKGTGL 97

>FZY1_CAEEL (Q09373) WD-repeat-containing protein fzy-1 (Fizzy protein 1)|
          Length = 507

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 10  RISQAANKHRSFIQXRTSNSNKQRINNGRGDQSEIKKKSXHGIQMDQ 150
           R+ Q    H + +      SNK+ +NN   + +  +KKS  G  + Q
Sbjct: 54  RLDQDELDHANHLMTSKLYSNKENLNNSMSEPNSPEKKSVEGEALKQ 100

>H1_EMENI (Q9P8F8) Histone H1|
          Length = 200

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 118 KKSXHGIQMDQGNPSYNHSNTRGTMIAAYSVQDAPRINRSTELSR 252
           KK+  G++   G P  N +  R    AA +V D P++   T+  R
Sbjct: 134 KKTNAGVKKPAGRPKANTAKPRKASTAAPAVVDKPKVVSVTKSGR 178

>CADH2_BRARE (Q90275) Neural-cadherin precursor (N-cadherin) (Cadherin-2)|
           (ZNCAD)
          Length = 893

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 148 QGNPSYNHSNTRGTMIAAYSVQD-APRINRST 240
           +GNP+Y  SNT   +I    V D AP   R T
Sbjct: 342 EGNPTYGLSNTATAVIRLLDVNDNAPEFTRET 373


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,986,249
Number of Sequences: 219361
Number of extensions: 581314
Number of successful extensions: 1223
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)