ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3k12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43497.1|HVU43497 Hordeum vulgare putative 32.7 kDa jasmonate... 1104 0.0
2gb|AF021257.1|AF021257 Hordeum vulgare 32 kDa protein (JRG1.2) g... 708 0.0
3gb|U43496.1|HVU43496 Hordeum vulgare putative 32.6 kDa jasmonate... 432 e-118
4gb|AF021256.1|AF021256 Hordeum vulgare 32 kDa protein (JRG1.1) g... 432 e-118
5gb|AF021258.1|AF021258 Hordeum vulgare 32 kDa protein (JRG1.3) g... 392 e-106
6gb|AY372111.1| Triticum aestivum jasmonate-induced protein mRNA,... 391 e-105
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
9emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.008
10gb|AY105022.1| Zea mays PCO085279 mRNA sequence 46 0.12
11gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
14gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Can... 42 1.9
15gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosom... 42 1.9
16gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Canc... 42 1.9
17gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.9
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cance... 42 1.9
20dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
21emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 i... 42 1.9
22emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.9
23gb|AY351911.1| Danio rerio neuropilin 1b mRNA, complete cds 40 7.7
24gb|AY493415.1| Danio rerio neuropilin 1b (nrp1b) mRNA, complete cds 40 7.7
25gb|AY428800.1| Danio rerio soluble neuropilin 1b (nrp1b) mRNA, c... 40 7.7
26gb|AY428799.1| Danio rerio neuropilin 1b (nrp1b) mRNA, complete ... 40 7.7
27gb|AY657834.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.7
28gb|AC148465.2| Xenopus tropicalis clone CH216-65A19, complete se... 40 7.7
29ref|XM_985464.1| PREDICTED: Mus musculus excision repair cross-c... 40 7.7
30ref|XM_899152.2| PREDICTED: Mus musculus excision repair cross-c... 40 7.7
31ref|XM_484360.4| PREDICTED: Mus musculus excision repair cross-c... 40 7.7
32ref|XM_986718.1| PREDICTED: Mus musculus excision repair cross-c... 40 7.7
33ref|XM_922393.2| PREDICTED: Mus musculus excision repair cross-c... 40 7.7
34ref|XM_912465.2| PREDICTED: Mus musculus excision repair cross-c... 40 7.7
35gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete s... 40 7.7
36gb|DQ016627.1| Agrostis stolonifera Crs-1 mRNA, complete cds 40 7.7
37ref|NM_205674.1| Danio rerio neuropilin 1b (nrp1b), mRNA 40 7.7
38gb|AC025568.25| Homo sapiens 12 BAC RP11-540D4 (Roswell Park Can... 40 7.7
39emb|BX890632.7| Mouse DNA sequence from clone RP23-93E11 on chro... 40 7.7
40dbj|AK048416.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 7.7
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
42gb|AE004567.1| Pseudomonas aeruginosa PAO1, section 128 of 529 o... 40 7.7
43dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
44dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
45emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 i... 40 7.7
46emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chro... 40 7.7
47gb|AC154412.3| Mus musculus BAC clone RP24-225G4 from 14, comple... 40 7.7
48emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chr... 40 7.7
49gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 7.7
50emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chr... 40 7.7
51gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 7.7 
>gb|U43497.1|HVU43497 Hordeum vulgare putative 32.7 kDa jasmonate-induced protein mRNA,
            complete cds
          Length = 1091

 Score = 1104 bits (557), Expect = 0.0
 Identities = 564/565 (99%), Gaps = 1/565 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaagagtattaaaggcctacatggcggctacataggatcttctggagtagaaggactac 60
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1062 caaagagtattaaaggcctacatggcggctacataggatcttctggagtagaag-actac 1004

                                                                        
Query: 61   tcgatctcatcttcttattcgaattgaaaagaaatactagcctctattgcttagagtggg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tcgatctcatcttcttattcgaattgaaaagaaatactagcctctattgcttagagtggg 944

                                                                        
Query: 121  cgcacgtagacaccaagcgcatcaagatatataccgctacgcccgaagaacccaacgatg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  cgcacgtagacaccaagcgcatcaagatatataccgctacgcccgaagaacccaacgatg 884

                                                                        
Query: 181  ctgctattcttctgcgcgggtatggtgaaaggggttcccttcgcttctccgaaaggcccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  ctgctattcttctgcgcgggtatggtgaaaggggttcccttcgcttctccgaaaggcccg 824

                                                                        
Query: 241  tacgtcttcacattcgtgataaatttcaaggaagttattatgttgtgtcggtctttgtca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  tacgtcttcacattcgtgataaatttcaaggaagttattatgttgtgtcggtctttgtca 764

                                                                        
Query: 301  taaatgccgaatgttccagaaacttccttcataaattcagaagcgccgagcacaaacgtg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  taaatgccgaatgttccagaaacttccttcataaattcagaagcgccgagcacaaacgtg 704

                                                                        
Query: 361  ttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctggtca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703  ttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctggtca 644

                                                                        
Query: 421  acataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctccaga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643  acataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctccaga 584

                                                                        
Query: 481  cgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatggtcca 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583  cgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatggtcca 524

                                     
Query: 541  agctttgtgagaaggctctctgatt 565
            |||||||||||||||||||||||||
Sbjct: 523  agctttgtgagaaggctctctgatt 499
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>gb|AF021257.1|AF021257 Hordeum vulgare 32 kDa protein (JRG1.2) gene, complete cds
          Length = 4487

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaagagtattaaaggcctacatggcggctacataggatcttctggagtagaaggactac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4259 caaagagtattaaaggcctacatggcggctacataggatcttctggagtagaaggactac 4200

                                                                        
Query: 61   tcgatctcatcttcttattcgaattgaaaagaaatactagcctctattgcttagagtggg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4199 tcgatctcatcttcttattcgaattgaaaagaaatactagcctctattgcttagagtggg 4140

                                                                        
Query: 121  cgcacgtagacaccaagcgcatcaagatatataccgctacgcccgaagaacccaacgatg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4139 cgcacgtagacaccaagcgcatcaagatatataccgctacgcccgaagaacccaacgatg 4080

                                                                        
Query: 181  ctgctattcttctgcgcgggtatggtgaaaggggttcccttcgcttctccgaaaggcccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4079 ctgctattcttctgcgcgggtatggtgaaaggggttcccttcgcttctccgaaaggcccg 4020

                                                                        
Query: 241  tacgtcttcacattcgtgataaatttcaaggaagttattatgttgtgtcggtctttgtca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4019 tacgtcttcacattcgtgataaatttcaaggaagttattatgttgtgtcggtctttgtca 3960

                                                                     
Query: 301  taaatgccgaatgttccagaaacttccttcataaattcagaagcgccgagcacaaac 357
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3959 taaatgccgaatgttccagaaacttccttcataaattcagaagcgccgagcacaaac 3903



 Score =  402 bits (203), Expect = e-109
 Identities = 203/203 (100%)
 Strand = Plus / Minus

                                                                        
Query: 357  cgtgttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctg 416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3814 cgtgttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctg 3755

                                                                        
Query: 417  gtcaacataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctc 476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3754 gtcaacataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctc 3695

                                                                        
Query: 477  cagacgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3694 cagacgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 3635

                                   
Query: 537  tccaagctttgtgagaaggctct 559
            |||||||||||||||||||||||
Sbjct: 3634 tccaagctttgtgagaaggctct 3612
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>gb|U43496.1|HVU43496 Hordeum vulgare putative 32.6 kDa jasmonate-induced protein gene,
            complete cds
          Length = 1505

 Score =  432 bits (218), Expect = e-118
 Identities = 251/262 (95%)
 Strand = Plus / Minus

                                                                        
Query: 96   actagcctctattgcttagagtgggcgcacgtagacaccaagcgcatcaagatatatacc 155
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1364 actagcctctattggttagagtgggcgcacgtagacaccaagcgcatcaagatatatccc 1305

                                                                        
Query: 156  gctacgcccgaagaacccaacgatgctgctattcttctgcgcgggtatggtgaaaggggt 215
             || ||| | ||||||||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 1304 actgcgcgcaaagaacccaacgatgctactattcttctgcacggctatggtgaaaggggt 1245

                                                                        
Query: 216  tcccttcgcttctccgaaaggcccgtacgtcttcacattcgtgataaatttcaaggaagt 275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 tcccttcgcttctccgaaaggcccgtacgtcttcacattcgtgataaatttcaaggaagt 1185

                                                                        
Query: 276  tattatgttgtgtcggtctttgtcataaatgccgaatgttccagaaacttccttcataaa 335
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1184 tattatgttgtgtcggtctttgtcataaatgccgaatgttccagaaacttccttcacaaa 1125

                                  
Query: 336  ttcagaagcgccgagcacaaac 357
             |||||||||||||||||||||
Sbjct: 1124 ctcagaagcgccgagcacaaac 1103



 Score =  363 bits (183), Expect = 4e-97
 Identities = 198/203 (97%)
 Strand = Plus / Minus

                                                                        
Query: 357  cgtgttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctg 416
            |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1014 cgtgttttgatttcctcccgaacctccccatggtccagcattgtgcttctgtccagtctg 955

                                                                        
Query: 417  gtcaacataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctc 476
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 954  gtcaacataagaaaatttgattgaatcaataattgagccgctgctaacagtgatgctctc 895

                                                                        
Query: 477  cagacgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 536
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894  tagtcgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 835

                                   
Query: 537  tccaagctttgtgagaaggctct 559
            |||||||||||||||||||||||
Sbjct: 834  tccaagctttgtgagaaggctct 812



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                        
Query: 14   aggcctacatggcggctacataggatcttctggagtagaa-ggactactcgatctcatct 72
            ||||| ||| |||| |||||||||||||||||||||||||  |||||||||||| |||||
Sbjct: 1462 aggcccacagggcgactacataggatcttctggagtagaacagactactcgatcccatct 1403

                          
Query: 73   tcttattcgaattg 86
            | ||||||||||||
Sbjct: 1402 tgttattcgaattg 1389
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>gb|AF021256.1|AF021256 Hordeum vulgare 32 kDa protein (JRG1.1) gene, complete cds
          Length = 3786

 Score =  432 bits (218), Expect = e-118
 Identities = 251/262 (95%)
 Strand = Plus / Minus

                                                                        
Query: 96   actagcctctattgcttagagtgggcgcacgtagacaccaagcgcatcaagatatatacc 155
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3528 actagcctctattggttagagtgggcgcacgtagacaccaagcgcatcaagatatatccc 3469

                                                                        
Query: 156  gctacgcccgaagaacccaacgatgctgctattcttctgcgcgggtatggtgaaaggggt 215
             || ||| | ||||||||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 3468 actgcgcgcaaagaacccaacgatgctactattcttctgcacggctatggtgaaaggggt 3409

                                                                        
Query: 216  tcccttcgcttctccgaaaggcccgtacgtcttcacattcgtgataaatttcaaggaagt 275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 tcccttcgcttctccgaaaggcccgtacgtcttcacattcgtgataaatttcaaggaagt 3349

                                                                        
Query: 276  tattatgttgtgtcggtctttgtcataaatgccgaatgttccagaaacttccttcataaa 335
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3348 tattatgttgtgtcggtctttgtcataaatgccgaatgttccagaaacttccttcacaaa 3289

                                  
Query: 336  ttcagaagcgccgagcacaaac 357
             |||||||||||||||||||||
Sbjct: 3288 ctcagaagcgccgagcacaaac 3267



 Score =  363 bits (183), Expect = 4e-97
 Identities = 198/203 (97%)
 Strand = Plus / Minus

                                                                        
Query: 357  cgtgttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctg 416
            |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 3178 cgtgttttgatttcctcccgaacctccccatggtccagcattgtgcttctgtccagtctg 3119

                                                                        
Query: 417  gtcaacataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctc 476
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3118 gtcaacataagaaaatttgattgaatcaataattgagccgctgctaacagtgatgctctc 3059

                                                                        
Query: 477  cagacgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 536
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 tagtcgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 2999

                                   
Query: 537  tccaagctttgtgagaaggctct 559
            |||||||||||||||||||||||
Sbjct: 2998 tccaagctttgtgagaaggctct 2976



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                        
Query: 14   aggcctacatggcggctacataggatcttctggagtagaa-ggactactcgatctcatct 72
            ||||| ||| |||| |||||||||||||||||||||||||  |||||||||||| |||||
Sbjct: 3626 aggcccacagggcgactacataggatcttctggagtagaacagactactcgatcccatct 3567

                          
Query: 73   tcttattcgaattg 86
            | ||||||||||||
Sbjct: 3566 tgttattcgaattg 3553
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>gb|AF021258.1|AF021258 Hordeum vulgare 32 kDa protein (JRG1.3) gene, complete cds
          Length = 1792

 Score =  392 bits (198), Expect = e-106
 Identities = 247/262 (94%), Gaps = 1/262 (0%)
 Strand = Plus / Minus

                                                                        
Query: 96   actagcctctattgcttagagtgggcgcacgtagacaccaagcgcatcaagatatatacc 155
            |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1653 actagcctctattggttagagtgggcgcacgtaggcaccaagcgcatcaagatatatccc 1594

                                                                        
Query: 156  gctacgcccgaagaacccaacgatgctgctattcttctgcgcgggtatggtgaaaggggt 215
            | | ||| | ||||||||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 1593 g-tgcgcgcaaagaacccaacgatgctactattcttctgcacggctatggtgaaaggggt 1535

                                                                        
Query: 216  tcccttcgcttctccgaaaggcccgtacgtcttcacattcgtgataaatttcaaggaagt 275
            ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1534 tcccttcgcttctccgaaaggcccgtaagtcttcacattggtgataaatttcaaggaagt 1475

                                                                        
Query: 276  tattatgttgtgtcggtctttgtcataaatgccgaatgttccagaaacttccttcataaa 335
            ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1474 tattatgttgtgtaggtctttgtcataaatgccgaatgttccagaaacttccttcacaaa 1415

                                  
Query: 336  ttcagaagcgccgagcacaaac 357
             |||||||||||||||||||||
Sbjct: 1414 ctcagaagcgccgagcacaaac 1393



 Score =  355 bits (179), Expect = 1e-94
 Identities = 197/203 (97%)
 Strand = Plus / Minus

                                                                        
Query: 357  cgtgttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgtccagtctg 416
            |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1304 cgtgttttgatttcctcccgaacctccccatggtccagcattgtgcttctgtccagtctg 1245

                                                                        
Query: 417  gtcaacataagaaaatttgattgaatcaacaattgagccgctgctaacagtgatgctctc 476
            ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1244 gtcaacataagaaaatttgattgaatcaataattgagccgctgctaactgtgatgctctc 1185

                                                                        
Query: 477  cagacgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 536
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 tagtcgccttggtactgcctctaaaatgtctttatcaccccctccatttccaccccatgg 1125

                                   
Query: 537  tccaagctttgtgagaaggctct 559
            |||||||||||||||||||||||
Sbjct: 1124 tccaagctttgtgagaaggctct 1102



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                        
Query: 20   acatggcggctacataggatcttctggagtagaaggactactcgatctcatcttcttatt 79
            |||||| |||||||| |||||||||||||||| | |||||||||||| |||||| |||||
Sbjct: 1744 acatgggggctacatcggatcttctggagtaggaagactactcgatcccatcttgttatt 1685

                   
Query: 80   cgaattg 86
            |||||||
Sbjct: 1684 cgaattg 1678
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>gb|AY372111.1| Triticum aestivum jasmonate-induced protein mRNA, complete cds
          Length = 1158

 Score =  391 bits (197), Expect = e-105
 Identities = 388/451 (86%), Gaps = 3/451 (0%)
 Strand = Plus / Minus

                                                                       
Query: 109 gcttagagtgggcgcacgtagacaccaagcgcatcaagatatataccgctacgcccgaag 168
           |||||||| ||| |||||||||||||||| ||||| |||||||| || || || ||||||
Sbjct: 974 gcttagagagggtgcacgtagacaccaagtgcatcgagatatatcccactgcgtccgaag 915

                                                                       
Query: 169 aacccaacgatgctgctattcttctgcgcgggtatggtgaaaggggttcccttcgcttct 228
           || || ||||||||||||||||| ||| | ||||||||||||| |||||||||||||| |
Sbjct: 914 aagcccacgatgctgctattcttttgcactggtatggtgaaagtggttcccttcgcttgt 855

                                                                       
Query: 229 ccgaaaggcccgtacgtcttcacattcgtgataaatttcaaggaagttattatgttgtgt 288
           |||||||||||||| |||||||| || |||| ||||||||  || |||||||||||||| 
Sbjct: 854 ccgaaaggcccgtatgtcttcacgttggtgacaaatttcagtgatgttattatgttgtgg 795

                                                                       
Query: 289 cggtctttgtcataaatgccgaatgttccagaaacttccttcataaattcagaagcgccg 348
             |||| || |||||| |||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 794 ttgtctctgccataaaggccgaatgttccagaaacttccttcacaaactcagaagtgccg 735

                                                                       
Query: 349 agcacaaacgtgttttgatttcctcccgaacctccccagggtccagcgttgtgcttctgt 408
           || || ||||| ||||| |||||||| |||||||||||||||||| |  || ||||||| 
Sbjct: 734 agtacgaacgtattttgttttcctccagaacctccccagggtccaacagtgcgcttctga 675

                                                                       
Query: 409 ccagtctggtcaacataagaaaatttgattgaatcaacaattgagccgctgctaacagtg 468
           ||||  ||||| |||||||||||||||||||||||||  || | |||||||||||| |||
Sbjct: 674 ccagcttggtcgacataagaaaatttgattgaatcaatgatagtgccgctgctaactgtg 615

                                                                       
Query: 469 atgctctccagacgccttggtactgcctctaaaatgtctttatcaccccctccatttcca 528
           |||||||| ||||| |||||   |||||| |  |||||||||||    ||||||||||||
Sbjct: 614 atgctctctagacgtcttgg---tgcctcgacgatgtctttatctgagcctccatttcca 558

                                          
Query: 529 ccccatggtccaagctttgtgagaaggctct 559
           ||||||||||||| ||||||| |||||||||
Sbjct: 557 ccccatggtccaacctttgtgcgaaggctct 527
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 516     ccctccatttccaccccatggtccaagctttgtgagaaggc 556
               ||||||||||||||||||||| |||| ||| ||| ||||||
Sbjct: 7011050 ccctccatttccaccccatggcccaaccttggtgggaaggc 7011010



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 305     tgccgaatgttccagaaacttccttcataaattc 338
               |||| |||||||| ||||||||||||| ||||||
Sbjct: 7011405 tgccaaatgttccggaaacttccttcagaaattc 7011372



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 517     cctccatttccaccccatggtccaa 541
               |||||| ||||||||||||||||||
Sbjct: 2179162 cctccagttccaccccatggtccaa 2179138
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 516     ccctccatttccaccccatggtccaagctttgtgagaaggc 556
               ||||||||||||||||||||| |||| ||| ||| ||||||
Sbjct: 7010929 ccctccatttccaccccatggcccaaccttggtgggaaggc 7010889



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 305     tgccgaatgttccagaaacttccttcataaattc 338
               |||| |||||||| ||||||||||||| ||||||
Sbjct: 7011284 tgccaaatgttccggaaacttccttcagaaattc 7011251



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 517     cctccatttccaccccatggtccaa 541
               |||||| ||||||||||||||||||
Sbjct: 2179106 cctccagttccaccccatggtccaa 2179082
to top
>emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa0084K07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 147611

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 516   ccctccatttccaccccatggtccaagctttgtgagaaggc 556
             ||||||||||||||||||||| |||| ||| ||| ||||||
Sbjct: 69163 ccctccatttccaccccatggcccaaccttggtgggaaggc 69203



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 305   tgccgaatgttccagaaacttccttcataaattc 338
             |||| |||||||| ||||||||||||| ||||||
Sbjct: 68808 tgccaaatgttccggaaacttccttcagaaattc 68841
to top
>gb|AY105022.1| Zea mays PCO085279 mRNA sequence
          Length = 1343

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 453 gccgctgctaacagtgatgctctccagacgc 483
           ||||||||| || ||||||||||||||||||
Sbjct: 693 gccgctgctgacggtgatgctctccagacgc 663
to top
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0056I10, complete sequence
          Length = 158833

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 516   ccctccatttccaccccatggtccaa 541
             ||||| ||||||||||||||||||||
Sbjct: 95048 ccctctatttccaccccatggtccaa 95073



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 516   ccctccatttccaccccatggtccaa 541
             ||||| ||||||||||||||||||||
Sbjct: 64683 ccctctatttccaccccatggtccaa 64708
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 516      ccctccatttccaccccatggtccaa 541
                ||||| ||||||||||||||||||||
Sbjct: 18359683 ccctctatttccaccccatggtccaa 18359708



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 516      ccctccatttccaccccatggtccaa 541
                ||||| ||||||||||||||||||||
Sbjct: 18329318 ccctctatttccaccccatggtccaa 18329343
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 516      ccctccatttccaccccatggtccaa 541
                ||||| ||||||||||||||||||||
Sbjct: 18519084 ccctctatttccaccccatggtccaa 18519109



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 516      ccctccatttccaccccatggtccaa 541
                ||||| ||||||||||||||||||||
Sbjct: 18488719 ccctctatttccaccccatggtccaa 18488744
to top
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195335

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   tttcaaggaagttattatgtt 284
             |||||||||||||||||||||
Sbjct: 79558 tttcaaggaagttattatgtt 79538
to top
>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete
             sequence
          Length = 197843

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 352   acaaacgtgttttgatttcct 372
             |||||||||||||||||||||
Sbjct: 82296 acaaacgtgttttgatttcct 82316
to top
>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 182933

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 322   acttccttcataaattcagaa 342
             |||||||||||||||||||||
Sbjct: 37606 acttccttcataaattcagaa 37626
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 127     tagacaccaagcgcatcaaga 147
               |||||||||||||||||||||
Sbjct: 1026120 tagacaccaagcgcatcaaga 1026100
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 517     cctccatttccaccccatggtccaa 541
               |||||||||||||||||||| ||||
Sbjct: 3506653 cctccatttccaccccatggaccaa 3506629
to top
>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 264    tttcaaggaagttattatgtt 284
              |||||||||||||||||||||
Sbjct: 165588 tttcaaggaagttattatgtt 165568
to top
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0033B09
          Length = 143545

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 517    cctccatttccaccccatggtccaa 541
              |||||||||||||||||||| ||||
Sbjct: 123357 cctccatttccaccccatggaccaa 123333
to top
>emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 in linkage group 20,
             complete sequence
          Length = 225010

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   tgattgaatcaacaattgagc 454
             |||||||||||||||||||||
Sbjct: 42712 tgattgaatcaacaattgagc 42732
to top
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132703

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 517   cctccatttccaccccatggtccaa 541
             |||||| ||||||||||||||||||
Sbjct: 61386 cctccagttccaccccatggtccaa 61362
to top
>gb|AY351911.1| Danio rerio neuropilin 1b mRNA, complete cds
          Length = 3573

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgaatgttccagaaacttc 326
           ||||||||||||||||||||
Sbjct: 846 ccgaatgttccagaaacttc 865
to top
>gb|AY493415.1| Danio rerio neuropilin 1b (nrp1b) mRNA, complete cds
          Length = 3100

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgaatgttccagaaacttc 326
           ||||||||||||||||||||
Sbjct: 645 ccgaatgttccagaaacttc 664
to top
>gb|AY428800.1| Danio rerio soluble neuropilin 1b (nrp1b) mRNA, complete cds,
           alternatively spliced
          Length = 3399

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgaatgttccagaaacttc 326
           ||||||||||||||||||||
Sbjct: 832 ccgaatgttccagaaacttc 851
to top
>gb|AY428799.1| Danio rerio neuropilin 1b (nrp1b) mRNA, complete cds, alternatively
           spliced
          Length = 4633

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgaatgttccagaaacttc 326
           ||||||||||||||||||||
Sbjct: 832 ccgaatgttccagaaacttc 851
to top
>gb|AY657834.1| Synthetic construct Peudomonas aeruginosa clone FLH045438.01F
           PA1381 gene, partial cds
          Length = 492

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 464 cagtgatgctctccagacgc 483
           ||||||||||||||||||||
Sbjct: 412 cagtgatgctctccagacgc 393
to top
>gb|AC148465.2| Xenopus tropicalis clone CH216-65A19, complete sequence
          Length = 167567

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   actgcctctaaaatgtcttt 509
             ||||||||||||||||||||
Sbjct: 85490 actgcctctaaaatgtcttt 85509
to top
>ref|XM_985464.1| PREDICTED: Mus musculus excision repair cross-complementing rodent
            repair deficiency, complementation group 6, transcript
            variant 5 (Ercc6), mRNA
          Length = 6598

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 2705 ctgctaacagtgatgctctc 2724
to top
>ref|XM_899152.2| PREDICTED: Mus musculus excision repair cross-complementing rodent
            repair deficiency, complementation group 6, transcript
            variant 4 (Ercc6), mRNA
          Length = 6715

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 2822 ctgctaacagtgatgctctc 2841
to top
>ref|XM_484360.4| PREDICTED: Mus musculus excision repair cross-complementing rodent
            repair deficiency, complementation group 6, transcript
            variant 1 (Ercc6), mRNA
          Length = 8422

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 4529 ctgctaacagtgatgctctc 4548
to top
>ref|XM_986718.1| PREDICTED: Mus musculus excision repair cross-complementing rodent
            repair deficiency, complementation group 6, transcript
            variant 9 (Ercc6), mRNA
          Length = 6598

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 2705 ctgctaacagtgatgctctc 2724
to top
>ref|XM_922393.2| PREDICTED: Mus musculus excision repair cross-complementing rodent
            repair deficiency, complementation group 6, transcript
            variant 8 (Ercc6), mRNA
          Length = 6715

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 2822 ctgctaacagtgatgctctc 2841
to top
>ref|XM_912465.2| PREDICTED: Mus musculus excision repair cross-complementing rodent
            repair deficiency, complementation group 6, transcript
            variant 5 (Ercc6), mRNA
          Length = 8422

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 4529 ctgctaacagtgatgctctc 4548
to top
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence
          Length = 139778

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   atggtgaaaggggttccctt 221
             ||||||||||||||||||||
Sbjct: 88217 atggtgaaaggggttccctt 88198
to top
>gb|DQ016627.1| Agrostis stolonifera Crs-1 mRNA, complete cds
          Length = 1283

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 515 cccctccatttccaccccatggtccaagcttt 546
           |||||||||| ||||||||||| |||| ||||
Sbjct: 604 cccctccattcccaccccatggcccaaccttt 573
to top
>ref|NM_205674.1| Danio rerio neuropilin 1b (nrp1b), mRNA
          Length = 4633

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgaatgttccagaaacttc 326
           ||||||||||||||||||||
Sbjct: 832 ccgaatgttccagaaacttc 851
to top
>gb|AC025568.25| Homo sapiens 12 BAC RP11-540D4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 151154

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  ctgcctctaaaatgtcttta 510
            ||||||||||||||||||||
Sbjct: 4393 ctgcctctaaaatgtcttta 4374
to top
>emb|BX890632.7| Mouse DNA sequence from clone RP23-93E11 on chromosome X, complete
             sequence
          Length = 194049

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   ccccctccatttccacccca 533
             ||||||||||||||||||||
Sbjct: 59526 ccccctccatttccacccca 59507
to top
>dbj|AK048416.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130058G22 product:hypothetical 'Winged
            helix' DNA-binding domain structure containing protein,
            full insert sequence
          Length = 4131

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ctgctaacagtgatgctctc 476
            ||||||||||||||||||||
Sbjct: 988  ctgctaacagtgatgctctc 1007
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 423      ataagaaaatttgattgaat 442
                ||||||||||||||||||||
Sbjct: 37133249 ataagaaaatttgattgaat 37133230
to top
>gb|AE004567.1| Pseudomonas aeruginosa PAO1, section 128 of 529 of the complete
            genome
          Length = 11957

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 464  cagtgatgctctccagacgc 483
            ||||||||||||||||||||
Sbjct: 9325 cagtgatgctctccagacgc 9306
to top
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0489B03
          Length = 150381

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  ataagaaaatttgattgaat 442
            ||||||||||||||||||||
Sbjct: 7905 ataagaaaatttgattgaat 7886
to top
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0683F02
          Length = 153388

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    ataagaaaatttgattgaat 442
              ||||||||||||||||||||
Sbjct: 134390 ataagaaaatttgattgaat 134371
to top
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2,
            complete sequence
          Length = 185178

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 307  ccgaatgttccagaaacttc 326
            ||||||||||||||||||||
Sbjct: 6268 ccgaatgttccagaaacttc 6249
to top
>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete
             sequence
          Length = 141997

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   ccccctccatttccacccca 533
             ||||||||||||||||||||
Sbjct: 64115 ccccctccatttccacccca 64096



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   ccccctccatttccacccca 533
             ||||||||||||||||||||
Sbjct: 48846 ccccctccatttccacccca 48865
to top
>gb|AC154412.3| Mus musculus BAC clone RP24-225G4 from 14, complete sequence
          Length = 182048

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    ctgctaacagtgatgctctc 476
              ||||||||||||||||||||
Sbjct: 161688 ctgctaacagtgatgctctc 161707
to top
>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete
              sequence
          Length = 215157

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    ctgctaacagtgatgctctc 476
              ||||||||||||||||||||
Sbjct: 185172 ctgctaacagtgatgctctc 185153
to top
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 448     attgagccgctgctaacagtgatg 471
               |||||||||||| |||||||||||
Sbjct: 1460941 attgagccgctgttaacagtgatg 1460964
to top
>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete
              sequence
          Length = 203422

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    ccagtctggtcaacataaga 428
              ||||||||||||||||||||
Sbjct: 138619 ccagtctggtcaacataaga 138638
to top
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 241    tacgtcttcacattcgtgataaatttca 268
              |||||||||||||| |||||||| ||||
Sbjct: 819999 tacgtcttcacatttgtgataaaattca 819972


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,787,612
Number of Sequences: 3902068
Number of extensions: 4787612
Number of successful extensions: 89315
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88957
Number of HSP's gapped (non-prelim): 353
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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