>FOXE3_HUMAN (Q13461) Forkhead box protein E3 (Forkhead-related protein FKHL12)|
           (Forkhead-related transcription factor 8) (FREAC-8)
          Length = 319

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 483 SGADPALHPDARTSPLGRATPSPSTGYGQRPHEPQRR 373
           +GA+P   P+   +  G A P+P+ G G+R   P +R
Sbjct: 33  AGAEPGREPEEAAAGRGEAAPTPAPGPGRRRRRPLQR 69

>PITM1_HUMAN (O00562) Membrane-associated phosphatidylinositol transfer protein|
           1 (Phosphatidylinositol transfer protein,
           membrane-associated 1) (Pyk2 N-terminal
           domain-interacting receptor 2) (NIR-2) (Drosophila
           retinal degeneration B homolog)
          Length = 1243

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 333 CIENEWTRVETLSIRSFETKTFKFLLFENXKCN 235
           C ++EWT +    IR+ E +T + L     KCN
Sbjct: 228 CWQDEWTELSMADIRALEEETARMLAQRMAKCN 260

>BUD3_YEAST (P25558) Bud site selection protein BUD3|
          Length = 1636

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +2

Query: 185 IRVDNVSNKRSDGLICKLHXLFSNNRNLKVFVSNDRMDNVSTLVHSFSMHHKSIALFTFA 364
           +R D +  K S  ++CKL   F ++ ++   ++  R+    T  H F        L++ A
Sbjct: 572 LRFDRLKGKDSFSMVCKLSSAFISSSSVADLITKARILEKDTAFHLFKASRSHFTLYSTA 631

Query: 365 QRHRRC 382
             H  C
Sbjct: 632 --HELC 635

>PTBP2_ARATH (Q9FGL9) Polypyrimidine tract-binding protein homolog 2|
          Length = 429

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 218 DGLICKLHXLFSNNRNLKVFVSNDR 292
           DG  CKLH  +S + +L + V+NDR
Sbjct: 310 DGGFCKLHITYSRHTDLSIKVNNDR 334

>IBP4_BOVIN (Q05716) Insulin-like growth factor-binding protein 4 precursor|
           (IGFBP-4) (IBP-4) (IGF-binding protein 4)
          Length = 258

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 303 FLPSSTHSRCITNQSLCLPLHRGTAAAVHGVVGHSR*KAREWPVPEGLC 449
           F P S H R    + L     R T+     V+G  R +AR  PVP+G C
Sbjct: 128 FSPCSAHDRKCLQKHLAKIRDRSTSGGKMKVIGAPREEAR--PVPQGSC 174

>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11|
          Length = 154

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 489 RRSGADPALHPDARTSPLGRATPSPSTGYG 400
           R + A PA HP A  +P+G    +PS G G
Sbjct: 33  RPAAAAPAYHPPAAPTPMGAPMGAPSQGPG 62

>CHMP7_BRARE (Q6PBQ2) Protein CHMP7|
          Length = 457

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 482 AVPTRPCTPTHAQALWDGPLPRLLPAMANDPMN 384
           AVPT P TP     L D    + LP++ N  MN
Sbjct: 390 AVPTHPITPPRKTDLPDAAFVQFLPSVPNPGMN 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,349,179
Number of Sequences: 219361
Number of extensions: 1428731
Number of successful extensions: 3640
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3640
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)