Clone Information

BLAST Search Result

Clone Name	rbags3k01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	291	3e-78
2	RL3B_ARATH (P22738) 60S ribosomal protein L3	272	2e-72
3	RL3A_ARATH (P17094) 60S ribosomal protein L3	266	1e-70
4	RL3_DROME (O16797) 60S ribosomal protein L3	219	4e-57
5	RL3_TOXCA (P49149) 60S ribosomal protein L3	216	5e-56
6	RL3_CAEEL (P50880) 60S ribosomal protein L3	211	1e-54
7	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	210	3e-54
8	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	208	8e-54
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	208	8e-54
10	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	208	1e-53
11	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	208	1e-53
12	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	207	2e-53
13	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	204	2e-52
14	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	202	5e-52
15	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	202	8e-52
16	RL3_DICDI (P34113) 60S ribosomal protein L3	201	2e-51
17	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	200	3e-51
18	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	199	4e-51
19	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	199	5e-51
20	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	199	5e-51
21	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	197	2e-50
22	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	196	3e-50
23	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	196	3e-50
24	RL3_NEUCR (P59671) 60S ribosomal protein L3	190	3e-48
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	190	3e-48
26	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	119	7e-27
27	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	112	8e-25
28	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	109	5e-24
29	RL3_PYRHO (O59418) 50S ribosomal protein L3P	109	7e-24
30	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	103	3e-22
31	RL3_METJA (P54014) 50S ribosomal protein L3P	96	1e-19
32	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	94	4e-19
33	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	92	1e-18
34	RL3_ARCFU (O28354) 50S ribosomal protein L3P	90	6e-18
35	RL3_METTH (O26110) 50S ribosomal protein L3P	90	6e-18
36	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	90	6e-18
37	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	88	2e-17
38	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	80	3e-15
39	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	79	1e-14
40	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	78	2e-14
41	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	76	6e-14
42	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	74	4e-13
43	RL3_NANEQ (P60458) 50S ribosomal protein L3P	69	1e-11
44	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	62	1e-09
45	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	62	1e-09
46	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	60	4e-09
47	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	58	2e-08
48	RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase...	37	0.043
49	RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase...	37	0.043
50	RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase...	37	0.056
51	RL3_MYCPU (Q98PY0) 50S ribosomal protein L3	32	1.8
52	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	2.4
53	ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor...	31	3.1
54	HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	31	3.1
55	CXO3_CONIM (Q5K0C0) Conotoxin-3 precursor	30	4.0
56	BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3...	30	5.3
57	IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)	30	5.3
58	IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)	30	5.3
59	LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A ...	29	9.0

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  291 bits (744), Expect(2) = 3e-78
 Identities = 138/147 (93%), Positives = 142/147 (96%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TE
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTE 300

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FDRTEKDITPMGGFPHYGVVK DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA +EIKLK
Sbjct: 301 FDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 360

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           F+DTSSKFGHGRFQTTDEKQRF+GKLK
Sbjct: 361 FIDTSSKFGHGRFQTTDEKQRFFGKLK 387



 Score = 20.8 bits (42), Expect(2) = 3e-78
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 595 WGVTRLP 575
           WGVTRLP
Sbjct: 235 WGVTRLP 241

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>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  272 bits (695), Expect(2) = 2e-72
 Identities = 125/145 (86%), Positives = 136/145 (93%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTE 300

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           +DRTEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA +EIKLK
Sbjct: 301 YDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLK 360

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGK 142
           F+D +S  GHGRFQT+ EK +FYG+
Sbjct: 361 FIDAASNGGHGRFQTSQEKAKFYGR 385



 Score = 20.8 bits (42), Expect(2) = 2e-72
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 595 WGVTRLP 575
           WGVTRLP
Sbjct: 235 WGVTRLP 241

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>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  266 bits (679), Expect(2) = 1e-70
 Identities = 122/146 (83%), Positives = 135/146 (92%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTE 300

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           +DRTEKD+TPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQSLL QTSRLA +EIKLK
Sbjct: 301 YDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLK 360

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKL 139
           F+DT+S FGHGRFQT+ EK RFY ++
Sbjct: 361 FIDTASIFGHGRFQTSLEKMRFYNRV 386



 Score = 20.8 bits (42), Expect(2) = 1e-70
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 595 WGVTRLP 575
           WGVTRLP
Sbjct: 235 WGVTRLP 241

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>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  219 bits (559), Expect = 4e-57
 Identities = 106/154 (68%), Positives = 123/154 (79%), Gaps = 7/154 (4%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD---- 409
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y+IG  G  T D    
Sbjct: 240 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVI 298

Query: 408 ---ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 238
              ASTE+D T+K ITPMGGFPHYG V  D++MIKGCC+G KKR++TLR+SLLK T R A
Sbjct: 299 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 358

Query: 237 XKEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
            ++IKLKF+DTSSK GHGRFQT  +K  F G LK
Sbjct: 359 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 392

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>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  216 bits (549), Expect = 5e-56
 Identities = 98/150 (65%), Positives = 122/150 (81%), Gaps = 3/150 (2%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDA 406
           PRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKK+Y++GK     +   + 
Sbjct: 240 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNG 299

Query: 405 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEI 226
            T++D TEK + PMGGFPHYG+V  D++MI+GCCVG KKR +TLR+SL+ QT R A ++I
Sbjct: 300 GTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKI 359

Query: 225 KLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
            LK++DTSSKFGHGRFQT  EK+ F GKLK
Sbjct: 360 NLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 389

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>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  211 bits (537), Expect = 1e-54
 Identities = 97/150 (64%), Positives = 124/150 (82%), Gaps = 3/150 (2%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDA 406
           PRKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300

Query: 405 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEI 226
           STEFD T+K ITPMGGFP YG+V  DY+M++G  +GPKKR++TLR+SL+ QT R+A ++I
Sbjct: 301 STEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKI 360

Query: 225 KLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
            LK++DTSSK GHGRFQTT EK+ F GKLK
Sbjct: 361 NLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390

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>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  210 bits (534), Expect = 3e-54
 Identities = 102/153 (66%), Positives = 125/153 (81%), Gaps = 6/153 (3%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET- 415
           PRKTHRGLRKVACIGAWHPARV++TVARAGQ GYHHRTE+NKK+YKIG     K G+   
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299

Query: 414 HDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAX 235
           ++AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R A 
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359

Query: 234 KEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  208 bits (530), Expect = 8e-54
 Identities = 101/153 (66%), Positives = 125/153 (81%), Gaps = 6/153 (3%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET- 415
           PRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299

Query: 414 HDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAX 235
           ++AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R A 
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359

Query: 234 KEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  208 bits (530), Expect = 8e-54
 Identities = 101/153 (66%), Positives = 125/153 (81%), Gaps = 6/153 (3%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET- 415
           PRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299

Query: 414 HDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAX 235
           ++AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R A 
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359

Query: 234 KEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392

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>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  208 bits (529), Expect = 1e-53
 Identities = 96/150 (64%), Positives = 123/150 (82%), Gaps = 3/150 (2%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDA 406
           PRKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300

Query: 405 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEI 226
           STEFD T+K I PMGGFP YG+V  DY+M++G  +GPKKR++TLR+SL+ QT R+A ++I
Sbjct: 301 STEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKI 360

Query: 225 KLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
            LK++DTSSK GHGRFQTT EK+ F GKLK
Sbjct: 361 NLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390

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>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  208 bits (529), Expect = 1e-53
 Identities = 101/153 (66%), Positives = 125/153 (81%), Gaps = 6/153 (3%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET- 415
           PRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299

Query: 414 HDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAX 235
           ++AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R A 
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359

Query: 234 KEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  207 bits (527), Expect = 2e-53
 Identities = 101/147 (68%), Positives = 117/147 (79%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KVY+IGK G E + A+TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGN-AATE 298

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FDRT+K ITPMGGF HYG V  D++M+KG   G +KRVVTLR+SL   TSR A +E+ LK
Sbjct: 299 FDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLK 358

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFG GRFQT  EK  F G LK
Sbjct: 359 WIDTASKFGKGRFQTPAEKHAFMGTLK 385

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>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  204 bits (519), Expect = 2e-52
 Identities = 98/154 (63%), Positives = 118/154 (76%), Gaps = 7/154 (4%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD---- 409
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+Y+IG+ G    D    
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVV 298

Query: 408 ---ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 238
              AST +D T+K ITP+GGFPHYG V  D++M+KGC  G KKRV+TLR+SLL   SR A
Sbjct: 299 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 358

Query: 237 XKEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
            + I+LKF+DT+SKFGHGRFQT  EK+ F G  K
Sbjct: 359 LENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392

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>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  202 bits (515), Expect = 5e-52
 Identities = 100/153 (65%), Positives = 124/153 (81%), Gaps = 6/153 (3%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET- 415
           PRKTHRGLRKVACIGA HPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   
Sbjct: 240 PRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299

Query: 414 HDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAX 235
           ++AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R A 
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359

Query: 234 KEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  202 bits (513), Expect = 8e-52
 Identities = 97/154 (62%), Positives = 117/154 (75%), Gaps = 7/154 (4%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD---- 409
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+++IG+ G    D    
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLV 298

Query: 408 ---ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 238
              AST +D T K ITP+GGFPHYG V  D++M+KGC  G KKRV+TLR+SLL   SR A
Sbjct: 299 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 358

Query: 237 XKEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
            + I+LKF+DT+SKFGHGRFQT  EK+ F G  K
Sbjct: 359 VENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392

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>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  201 bits (510), Expect = 2e-51
 Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 4/151 (2%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKV----GQETHD 409
           PRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y+IG+     G++   
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQIST 300

Query: 408 ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKE 229
             TEFD TEK I PMGGF HYG+VK ++LM+KGC  GP+KR +TLR+S+  QT R A ++
Sbjct: 301 GKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEK 360

Query: 228 IKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           I LKF+DTSSKFGHG  QT ++K +++G  K
Sbjct: 361 ITLKFIDTSSKFGHGLHQTAEDKTKYFGVKK 391

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>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  200 bits (508), Expect = 3e-51
 Identities = 95/147 (64%), Positives = 116/147 (78%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GK G +  +A+TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATE 297

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FDRT+K ITPMGGF HYG +  D++++KG   G +KRVVTLR+SL   TSR A +E+ LK
Sbjct: 298 FDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLK 357

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFG GRFQT  EK  F G LK
Sbjct: 358 WIDTASKFGKGRFQTPAEKHAFLGTLK 384

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>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  199 bits (507), Expect = 4e-51
 Identities = 93/147 (63%), Positives = 115/147 (78%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GK G +  + +T 
Sbjct: 238 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATS 296

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FDRT+K ITPMGGF HYG +K D++M+KGC  G +KR+VTLR+SL   TSR A +E+ LK
Sbjct: 297 FDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLK 356

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFG GRFQT  EK  F G LK
Sbjct: 357 WIDTASKFGKGRFQTPAEKHAFMGTLK 383

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>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  199 bits (506), Expect = 5e-51
 Identities = 95/147 (64%), Positives = 118/147 (80%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N KV++IGK G +  +AST+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTD 298

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FD ++K ITPMGGF  YG VK DY+M+KG   G KKRV+TLR++L  QTSR A ++++LK
Sbjct: 299 FDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELK 358

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DTSSKFGHG FQT +EK+ F G LK
Sbjct: 359 WIDTSSKFGHGAFQTPEEKRAFMGTLK 385

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>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  199 bits (506), Expect = 5e-51
 Identities = 96/147 (65%), Positives = 115/147 (78%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y+IGK G +  +A+T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATN 297

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FDRT+K I PMGGF HYG+V  D++M+KG   G KKRVVTLR+SL   TSR A +E+ LK
Sbjct: 298 FDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLK 357

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFG GRFQT  EK  F G LK
Sbjct: 358 WIDTASKFGKGRFQTPAEKHAFMGTLK 384

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>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  197 bits (500), Expect = 2e-50
 Identities = 94/147 (63%), Positives = 113/147 (76%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G  G E+  A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TE 297

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FDRT+K I PMGGF  YG VK D++++KG   G KKR+VT+R+SL   TSR A + + LK
Sbjct: 298 FDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLK 357

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFG GRFQT  EK  F G LK
Sbjct: 358 WIDTASKFGKGRFQTPAEKHAFLGTLK 384

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>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  196 bits (499), Expect = 3e-50
 Identities = 94/147 (63%), Positives = 115/147 (78%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+
Sbjct: 238 PRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTD 296

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FD TEK ITPMGGF  YGVV+ D++M+ G   GP KRV+TLR+SLL  TSR A + + LK
Sbjct: 297 FDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLK 356

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFGHGRFQT  E ++F G LK
Sbjct: 357 WIDTASKFGHGRFQTPAEAKQFLGTLK 383

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>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  196 bits (499), Expect = 3e-50
 Identities = 94/147 (63%), Positives = 115/147 (78%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+
Sbjct: 238 PRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTD 296

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FD TEK ITPMGGF  YGVV+ D++M+ G   GP KRV+TLR+SLL  TSR A + + LK
Sbjct: 297 FDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLK 356

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DT+SKFGHGRFQT  E ++F G LK
Sbjct: 357 WIDTASKFGHGRFQTPAEAKQFLGTLK 383

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>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  190 bits (482), Expect = 3e-48
 Identities = 90/147 (61%), Positives = 114/147 (77%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y+IGK G     A+TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATE 298

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
            D T+K ITPMGGF  YG +  D++M+KG   G KKRV+TLR+S+   TSR A ++++LK
Sbjct: 299 VDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELK 358

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           ++DTSS+FGHG FQT  EK++F G LK
Sbjct: 359 WIDTSSEFGHGAFQTPAEKKQFQGTLK 385

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>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  190 bits (482), Expect = 3e-48
 Identities = 92/147 (62%), Positives = 115/147 (78%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRK+ +G+RKVACIGAWHP+RV Y++ARAGQ G+H RTE NK+VY I   G  + +  TE
Sbjct: 235 PRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMI---GNGSSNIKTE 291

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
           FD TEK I+PMGGFPHYG V+ D++M+KG  VG +KRVVTLR+SLL+Q    A +E+ +K
Sbjct: 292 FDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIK 348

Query: 216 FVDTSSKFGHGRFQTTDEKQRFYGKLK 136
           FVDTSSK GHGRFQT+ EK+ FYG  K
Sbjct: 349 FVDTSSKIGHGRFQTSAEKKAFYGARK 375

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>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score =  119 bits (298), Expect = 7e-27
 Identities = 56/93 (60%), Positives = 72/93 (77%), Gaps = 6/93 (6%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ET 415
           PRKTHRGLRKVACIGAWHPAR +++VARAGQ GYHHRTE+NKK+YKIG     K G+   
Sbjct: 38  PRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 97

Query: 414 HDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 316
           ++  T++D ++K I P+G F HYG V  D++M+
Sbjct: 98  NNXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130

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>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score =  112 bits (280), Expect = 8e-25
 Identities = 54/125 (43%), Positives = 79/125 (63%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +TE  
Sbjct: 245 KDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI- 303

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
               +ITP GGFPHYG+V++D++MI G   G  KR++ +R ++     +   +  ++ +V
Sbjct: 304 ----EITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYV 359

Query: 210 DTSSK 196
              SK
Sbjct: 360 SVESK 364

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>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score =  109 bits (273), Expect = 5e-24
 Identities = 53/125 (42%), Positives = 77/125 (61%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D
Sbjct: 242 KDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVID 295

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
             E +ITP GGFPHYG+V++D++MI G   G  KR++ +R ++     +   +  ++ +V
Sbjct: 296 GNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYV 355

Query: 210 DTSSK 196
              SK
Sbjct: 356 SVESK 360

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>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score =  109 bits (272), Expect = 7e-24
 Identities = 53/125 (42%), Positives = 76/125 (60%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D
Sbjct: 243 KDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVID 296

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
             E +ITP GGFPHYG+V+ D++MI G   G  KR++ +R ++     +   +  ++ +V
Sbjct: 297 GNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYV 356

Query: 210 DTSSK 196
              SK
Sbjct: 357 SVESK 361

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>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score =  103 bits (258), Expect = 3e-22
 Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
 Frame = -2

Query: 594 GVSPAFPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQE 418
           GV   F +    G  R +  +G WHPARV +TV +AGQ G+HHRTE NK++  IG+ G+ 
Sbjct: 218 GVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK- 276

Query: 417 THDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 238
                   D  E +ITP GGFPHYG+V++D+LMI+G   G  KR++ +R ++     +  
Sbjct: 277 -----LVLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPP 331

Query: 237 XKEIKLKFVDTSSK 196
            +  ++ +V   SK
Sbjct: 332 VERPQITYVSRESK 345

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>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
 Frame = -2

Query: 594 GVSPAFPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQE 418
           GV   F +   +G+ R V  IG W P  V ++V   GQ GYH RTE NK++ KIG  G E
Sbjct: 215 GVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE 274

Query: 417 THDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 238
                         ITP GGF HYGV++ +Y+++KG   GP KR++ LR+++  Q   + 
Sbjct: 275 --------------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIK 320

Query: 237 XKEIKLKFVDTSSKFG 190
             EI   ++ T+SK G
Sbjct: 321 VPEI--TYISTTSKQG 334

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>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 49/122 (40%), Positives = 73/122 (59%)
 Frame = -2

Query: 555 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD 376
           LR+V  +GA++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E              
Sbjct: 232 LRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE-------------- 277

Query: 375 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFVDTSSK 196
           +TP GGF +YG+V+ DY++IKG   GP KR++ LR  +  + + L   E  + ++   SK
Sbjct: 278 VTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPIRAKKADLG--EPNILYISRESK 335

Query: 195 FG 190
            G
Sbjct: 336 QG 337

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>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 47/122 (38%), Positives = 73/122 (59%)
 Frame = -2

Query: 555 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD 376
           LR++  +G+++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E              
Sbjct: 232 LRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE-------------- 277

Query: 375 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFVDTSSK 196
           +TP GGF +YG+V+ DY++IKG   GP KR++ LR  +  + + L   E  + ++   SK
Sbjct: 278 VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPIRAKKADLG--EPNILYISRESK 335

Query: 195 FG 190
            G
Sbjct: 336 QG 337

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>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 45/121 (37%), Positives = 71/121 (58%)
 Frame = -2

Query: 552 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 373
           R+V  +G W+P  V +TV +AGQ G+H RTE NK++ KIG+ G+E              I
Sbjct: 226 RRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------I 271

Query: 372 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFVDTSSKF 193
           TP GGF HYGV++  Y+++ G   GP KR++ +R ++  +  +     + + +V T+SK 
Sbjct: 272 TPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQ 329

Query: 192 G 190
           G
Sbjct: 330 G 330

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>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
 Frame = -2

Query: 552 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD- 376
           R +  +G W P+R  +TV +AGQ GYH RTE NK++ KIG             D +E D 
Sbjct: 230 RHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADL 276

Query: 375 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKE---IKLKFVDT 205
           + P GGF  YG+V+ DY+MIKG   GP KR+V LR+++     R A K+    ++ ++ T
Sbjct: 277 VNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAI-----RAAGKQEEAPQINYIST 331

Query: 204 SSKFG 190
           +SK G
Sbjct: 332 ASKQG 336

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>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
 Frame = -2

Query: 594 GVSPAFPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQE 418
           GV   F +   +G+ R+   IG W P RV +TV  AGQ G+H RTE NK++ K+G  G E
Sbjct: 214 GVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE 273

Query: 417 THDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 238
                         ITP GGF +YG VK  Y+++KG   GP KR+V LR ++     +  
Sbjct: 274 --------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFG 319

Query: 237 XKEIKLKFVDTSSKFGH 187
             E+   ++   SK G+
Sbjct: 320 LPEV--TYISKESKQGN 334

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>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
 Frame = -2

Query: 573 RKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 400
           RKT R    R +  IG   P+RV +TV  AGQ GYH RTE NK++ KIG+ G+E      
Sbjct: 227 RKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE------ 280

Query: 399 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 262
                   +TP GGF +YGVV+ DY+MI G   GPKKR++ +R ++
Sbjct: 281 --------VTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVRPAV 318

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>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 45/100 (45%), Positives = 57/100 (57%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G R+   IG   PA V +T  R GQ G+H RTE NK++ KIG+ G E         
Sbjct: 229 KHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE--------- 278

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 271
                ITP  GFPHYGVVK  Y++I+G   G +KR+V LR
Sbjct: 279 -----ITPKSGFPHYGVVKGPYILIQGSVPGARKRLVVLR 313

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>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 47/129 (36%), Positives = 65/129 (50%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRK  +  R +  +G WHP  V  TV +AGQ GY  RT  N +V K  K      DA T 
Sbjct: 216 PRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK----GEDADT- 270

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
                  I   GGF HYG+VK DY+++ G   GP KR++ +R    ++   +    +KL 
Sbjct: 271 -------INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPARQKVPDI--DNVKLD 321

Query: 216 FVDTSSKFG 190
           ++   SK G
Sbjct: 322 YISLESKQG 330

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>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 44/121 (36%), Positives = 65/121 (53%)
 Frame = -2

Query: 552 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 373
           R++  +G W+P+RV  TV + GQ GYH RTE+NK++  I   G E               
Sbjct: 231 RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIND-GDEP-------------- 275

Query: 372 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFVDTSSKF 193
           TP GGFP+YG V   Y ++KG   GP++R+V  R ++    S     E+  ++V T+S  
Sbjct: 276 TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQ 333

Query: 192 G 190
           G
Sbjct: 334 G 334

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>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 45/129 (34%), Positives = 65/129 (50%)
 Frame = -2

Query: 576 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTE 397
           PRK  +  R +  +G WHP  V  TV +AGQ G+  RT  N +V K G           E
Sbjct: 216 PRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGN--------KEE 267

Query: 396 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLK 217
            D     I   GGF HYG VK DY+++ G   G  KR++ +R    ++   +  +E+KL+
Sbjct: 268 VD----SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIKMRDPARQKVPDI--EEVKLE 321

Query: 216 FVDTSSKFG 190
           ++   SK G
Sbjct: 322 YISLESKQG 330

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>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 37/97 (38%), Positives = 54/97 (55%)
 Frame = -2

Query: 552 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 373
           R++  +G W+P+RV  TV + GQ GYH RTE+NK++  IG+  + T D            
Sbjct: 234 RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------------ 281

Query: 372 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 262
              GGF +YG V   Y ++KG   GP KR+V  R ++
Sbjct: 282 ---GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAV 315

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>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 41/125 (32%), Positives = 64/125 (51%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K+ +G+RKV  IG+  P R+  TV   GQ GYH RTE NK + KIG              
Sbjct: 215 KSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-------------- 260

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
              + +   GG+  YG V    +++KG   GP+KR++ LR+++  +  R   K   ++++
Sbjct: 261 ---EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAI--RPPRKQEKVEGIEYI 315

Query: 210 DTSSK 196
             S K
Sbjct: 316 SLSPK 320

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>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 42/127 (33%), Positives = 65/127 (51%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G RK+   G       SYT  + GQ G+H RTE NK++ KIG              
Sbjct: 243 KHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD------------- 287

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
              K+I P GGF  YG+V+  Y++++G  +G KKR + LR+ +  + S +     K+ +V
Sbjct: 288 -EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLREPV--RPSYVFENPPKITYV 344

Query: 210 DTSSKFG 190
           +  S+ G
Sbjct: 345 NLLSQQG 351

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>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 45/127 (35%), Positives = 64/127 (50%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G RKV   G    +  SY V + GQ GYH RTE NK++ KI     E         
Sbjct: 235 KHRKGSRKVGARGPSF-STPSY-VPQPGQMGYHRRTEYNKRILKISDDPNE--------- 283

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
                I P GGF +YG+V+  YL+I+G  +G KKR + LR  +  + S +     K+ +V
Sbjct: 284 -----INPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYV 336

Query: 210 DTSSKFG 190
           +  S+ G
Sbjct: 337 NLYSQQG 343

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>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
 Frame = -2

Query: 579 FPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDA 406
           FPR  K  +G RK+   G    +  SY V + GQ G+H RTE NK++ KIG         
Sbjct: 229 FPRWHKHRKGSRKIGARGP-SISTPSY-VPQPGQLGFHRRTEYNKRIIKIGD-------- 278

Query: 405 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEI 226
                    +I P GG  +YG+VK  YL+I+G  +G +KR + LR  +    S  +    
Sbjct: 279 ------NVNEINPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP-- 330

Query: 225 KLKFVDTSSKFG 190
           K+ +V+ +S+ G
Sbjct: 331 KITYVNLASQQG 342

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>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
 Frame = -2

Query: 570 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 391
           K  +G R++      H     +   +AGQ G+H RTE NK++  I   G +         
Sbjct: 231 KHRKGSRRIGARS--HGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------- 279

Query: 390 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLL--KQTSRLAXKEIKLK 217
                +TP GGF  YGVV++ ++M+ G   G  KR + +R ++   +   +L  ++ ++ 
Sbjct: 280 -----VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEIT 334

Query: 216 FVDTSSKFG 190
           ++  +SK G
Sbjct: 335 YISLASKQG 343

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>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 234
           + H+ F   +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 235 XCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 408
                G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 234
           + H+ F   +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 235 XCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 408
                G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = +1

Query: 79  VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 234
           + H+ F   +++T+++LR+S  L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 235 XCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 408
                G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3|
          Length = 266

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = -2

Query: 339 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAXKEIKLKFV 211
           VK + L++KG   GPKK  V +++   K  S+ A K + L+ V
Sbjct: 182 VKNNILLVKGAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224

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>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -2

Query: 513 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 349
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 348 YGV 340
            GV
Sbjct: 461 RGV 463

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>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 924

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +1

Query: 178 ETAVPKLGRGVDKLELDFLXCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 357
           E+  P     ++  E   L C  RG    G+      + WP+   +  +  G +H +   
Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729

Query: 358 ATHGSD 375
           A HG+D
Sbjct: 730 A-HGTD 734

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>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 315

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 118 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLXCETRGLLQQGLAEGHH 285
           LR  S L LA+ P L    L G ++T + KL  G    E D +   T GL + GLA  HH
Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183

Query: 286 TLLWP 300
            +L P
Sbjct: 184 EVLAP 188

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>CXO3_CONIM (Q5K0C0) Conotoxin-3 precursor|
          Length = 81

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -1

Query: 574 PQDPQRSSQGCL---YWCLASC*GVLHCCSGW 488
           P+  + + +GCL   Y+C  S  G L CCSGW
Sbjct: 43  PKASKLNKRGCLPDEYFCGFSMIGALLCCSGW 74

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>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = +1

Query: 91   RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLXCETRGL 255
            R+  +T+L    + +LE A++   L G L++   +L   +DK+E++ L  ET+GL
Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567

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>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 124 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLXCETRGLLQQGLA 273
           SS+++ L I   +L+  L TA  KLG  +  +  D        +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

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>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 124 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLXCETRGLLQQGLA 273
           SS+++ L I   +L+  L TA  KLG  +  +  D        +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

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>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 420  ETHDASTEFDRTEKDITPMGGFPHYGVVK 334
            ET  A+++ +R EKD+  +GG PH   V+
Sbjct: 2426 ETPGAASDLNRLEKDLIYVGGLPHSKAVR 2454


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,204,730
Number of Sequences: 219361
Number of extensions: 1840148
Number of successful extensions: 5306
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5253
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result