| Clone Name | rbags3j01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196890.1| Oryza sativa (japonica cultivar-group) mitochondrial chaperonin-60 (OSJNBa0071K18.10), mRNA Length = 2024 Score = 345 bits (174), Expect = 1e-91 Identities = 283/318 (88%), Gaps = 1/318 (0%) Strand = Plus / Minus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 1727 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 1668 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 414 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 1667 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 1608 Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1607 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 1548 Query: 475 tcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaaca 534 ||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1547 tcacctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgaca 1488 Query: 535 acaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagc 594 |||| | ||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||| Sbjct: 1487 acaa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtcttcaaagc 1429 Query: 595 attctgaatgatttgtac 612 |||||||||||||||||| Sbjct: 1428 attctgaatgatttgtac 1411
>dbj|AK119623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H08, full insert sequence Length = 2109 Score = 345 bits (174), Expect = 1e-91 Identities = 283/318 (88%), Gaps = 1/318 (0%) Strand = Plus / Minus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 1834 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 1775 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 414 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 1774 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 1715 Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1714 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 1655 Query: 475 tcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaaca 534 ||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1654 tcacctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgaca 1595 Query: 535 acaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagc 594 |||| | ||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||| Sbjct: 1594 acaa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtcttcaaagc 1536 Query: 595 attctgaatgatttgtac 612 |||||||||||||||||| Sbjct: 1535 attctgaatgatttgtac 1518
>dbj|AK109517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A02, full insert sequence Length = 2796 Score = 345 bits (174), Expect = 1e-91 Identities = 283/318 (88%), Gaps = 1/318 (0%) Strand = Plus / Minus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 2554 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 2495 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 414 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 2494 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 2435 Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 2434 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 2375 Query: 475 tcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaaca 534 ||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 2374 tcacctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgaca 2315 Query: 535 acaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagc 594 |||| | ||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||| Sbjct: 2314 acaa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtcttcaaagc 2256 Query: 595 attctgaatgatttgtac 612 |||||||||||||||||| Sbjct: 2255 attctgaatgatttgtac 2238
>dbj|AK069617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K12, full insert sequence Length = 2181 Score = 345 bits (174), Expect = 1e-91 Identities = 283/318 (88%), Gaps = 1/318 (0%) Strand = Plus / Minus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 1906 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 1847 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 414 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 1846 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 1787 Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1786 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 1727 Query: 475 tcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaaca 534 ||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1726 tcacctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgaca 1667 Query: 535 acaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagc 594 |||| | ||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||| Sbjct: 1666 acaa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtcttcaaagc 1608 Query: 595 attctgaatgatttgtac 612 |||||||||||||||||| Sbjct: 1607 attctgaatgatttgtac 1590
>gb|L21006.1|MZECPN60X Zea mays mitochondrial chaperonin 60 (mtcpn60II) mRNA, complete cds Length = 2139 Score = 240 bits (121), Expect = 4e-60 Identities = 266/313 (84%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 297 ttagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttaggaat 356 |||||||||||||||||||||||| |||||| | || ||| | ||| || || || || Sbjct: 1882 ttagtaatccattccacccatgccacccattgctggagccggtgcctcttccttggggat 1823 Query: 357 ctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaa 416 |||||| || |||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 1822 ctctacaattatggattccgtggtggtcatcagggacgacacactagcagcatccaccaa 1763 Query: 417 ggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattc 476 ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||| Sbjct: 1762 tgcagttctgatgacctttagcggatcaatgataccagccttcaccatgtcaacgtattc 1703 Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||| |||||||| ||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 1702 gtctttagcagcatcataaccaaggtcagtgtttccttgctccaaaagcttgcccacaac 1643 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagcat 596 | |||| || || || || |||||||| || || |||| || |||||||||||||||| Sbjct: 1642 ta-ctgctccctccaccccagcattggaggcaatggtgtgtacaggtgtcttcaaagcat 1584 Query: 597 tctgaatgatttg 609 ||||||||||||| Sbjct: 1583 tctgaatgatttg 1571
>gb|BT016176.1| Zea mays clone Contig9 mRNA sequence Length = 885 Score = 236 bits (119), Expect = 7e-59 Identities = 269/317 (84%), Gaps = 4/317 (1%) Strand = Plus / Plus Query: 296 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 352 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 400 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 459 Query: 353 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 412 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 460 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 519 Query: 413 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 472 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 520 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 579 Query: 473 attcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||||||| |||||||| || || ||||| || ||||||||||||||||| || | Sbjct: 580 attcacctttagcagcatcataacccaggtcagtattttcttgctccaaaagctttccta 639 Query: 533 caacaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 |||| | |||| || || || || |||||||| || || |||||||| |||||||||||| Sbjct: 640 caacta-ctgctccctccaccccagcattggaggcaattgtgtacacaggtgtcttcaaa 698 Query: 593 gcattctgaatgatttg 609 ||||||||||||||||| Sbjct: 699 gcattctgaatgatttg 715
>gb|BT023997.1| Zea mays clone EL01N0314G02 mRNA sequence Length = 2188 Score = 236 bits (119), Expect = 7e-59 Identities = 269/317 (84%), Gaps = 4/317 (1%) Strand = Plus / Minus Query: 296 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 352 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 1845 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 1786 Query: 353 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 412 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 1785 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 1726 Query: 413 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 472 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1725 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 1666 Query: 473 attcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||||||| |||||||| || || ||||| || ||||||||||||||||| || | Sbjct: 1665 attcacctttagcagcatcataacccaggtcagtattttcttgctccaaaagctttccta 1606 Query: 533 caacaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 |||| | |||| || || || || |||||||| || || |||||||| |||||||||||| Sbjct: 1605 caacta-ctgctccctccaccccagcattggaggcaattgtgtacacaggtgtcttcaaa 1547 Query: 593 gcattctgaatgatttg 609 ||||||||||||||||| Sbjct: 1546 gcattctgaatgatttg 1530
>gb|BT017311.1| Zea mays clone EL01N0317H06.c mRNA sequence Length = 1194 Score = 232 bits (117), Expect = 1e-57 Identities = 265/313 (84%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 297 ttagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttaggaat 356 |||||||||||||||||||||||| |||||| | || ||| | ||| || || || || Sbjct: 935 ttagtaatccattccacccatgccacccattgctggagccggtgcctcttccttggggat 876 Query: 357 ctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaa 416 |||||| || |||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 875 ctctacaattatggattccgtggtggtcatcagggacgacacactagcagcatccaccaa 816 Query: 417 ggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattc 476 ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||| Sbjct: 815 tgcagttctgatgacctttagcggatcaatgataccagccttcaccatgtcaacgtattc 756 Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||| |||||||| ||||| ||||| || ||||||||||||||||||| ||||| Sbjct: 755 gtctttagcagcatcataaccaaggtcagtatttccttgctccaaaagcttgcccacaac 696 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagcat 596 | |||| || || || || |||||||| || || |||| || |||||||||||||||| Sbjct: 695 ta-ctgctccctccaccccagcattggaggcaatggtgtgtacaggtgtcttcaaagcat 637 Query: 597 tctgaatgatttg 609 ||||||||||||| Sbjct: 636 tctgaatgatttg 624
>emb|Z12115.1|ZMCPNAGB Z.mays CPNB gene encoding mitochondrial chaperonin-60 Length = 2104 Score = 232 bits (117), Expect = 1e-57 Identities = 265/313 (84%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 297 ttagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttaggaat 356 |||||||||||||||||||||||| |||||| | || ||| | ||| || || || || Sbjct: 1774 ttagtaatccattccacccatgccacccattgctggagccggtgcctcttccttggggat 1715 Query: 357 ctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaa 416 |||||| || |||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 1714 ctctacaattatggattccgtggtggtcatcagggacgacacactagcagcatccaccaa 1655 Query: 417 ggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattc 476 ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||| Sbjct: 1654 tgcagttctgatgacctttagcggatcaatgataccagccttcaccatgtcaacgtattc 1595 Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||| |||||||| ||||| ||||| || ||||||||||||||||||| ||||| Sbjct: 1594 gtctttagcagcatcataaccaaggtcagtatttccttgctccaaaagcttgcccacaac 1535 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagcat 596 | |||| || || || || |||||||| || || |||| || |||||||||||||||| Sbjct: 1534 ta-ctgctccctccaccccagcattggaggcaatggtgtgtacaggtgtcttcaaagcat 1476 Query: 597 tctgaatgatttg 609 ||||||||||||| Sbjct: 1475 tctgaatgatttg 1463
>emb|Z11546.1|ZMCHHSP60 Z.mays mRNA for mitochondrial chaperonin hsp60 Length = 2138 Score = 220 bits (111), Expect = 4e-54 Identities = 267/317 (84%), Gaps = 4/317 (1%) Strand = Plus / Minus Query: 296 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 352 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 1794 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 1735 Query: 353 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 412 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 1734 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 1675 Query: 413 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 472 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1674 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 1615 Query: 473 attcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||||||| |||||||| || || ||||| || ||||||||||||||||| || | Sbjct: 1614 attcacctttagcagcatcataacccaggtcagtattttcttgctccaaaagctttccta 1555 Query: 533 caacaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 |||| | |||| || || || || |||||||| || || |||| || |||||||||||| Sbjct: 1554 caacta-ctgctccctccaccccagcattggaggcaattgtgtgtacaggtgtcttcaaa 1496 Query: 593 gcattctgaatgatttg 609 ||||||||||||||||| Sbjct: 1495 gcattctgaatgatttg 1479
>gb|AY109623.1| Zea mays CL2221_1 mRNA sequence Length = 2265 Score = 212 bits (107), Expect = 1e-51 Identities = 266/317 (83%), Gaps = 4/317 (1%) Strand = Plus / Minus Query: 296 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 352 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 1922 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 1863 Query: 353 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 412 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 1862 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 1803 Query: 413 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 472 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1802 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 1743 Query: 473 attcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||||||| |||||||| || || ||||| || ||||||||||||||||| || | Sbjct: 1742 attcacctttagcagcatcataacccaggtcagtattttcttgctccaaaagctttccta 1683 Query: 533 caacaacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 |||| | |||| || || || || ||||| || || || |||| || |||||||||||| Sbjct: 1682 caacta-ctgctccctccaccccagcatttgaggcaattgtgtgtacaggtgtcttcaaa 1624 Query: 593 gcattctgaatgatttg 609 ||||||||||||||||| Sbjct: 1623 gcattctgaatgatttg 1607
>emb|Z12114.1|ZMCPNAGA Z.mays CPNA gene encoding mitochondrial chaperonin-60 Length = 2247 Score = 206 bits (104), Expect = 6e-50 Identities = 198/228 (86%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 382 gtcatcagagatgacacactagcagcatccaccaaggcagttctgatcacctttagtggg 441 |||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 1833 gtcatcagggacgacacactagcagcatccaccaaagcagttctgataacctttagcggg 1774 Query: 442 tcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatatccaaga 501 ||||||||||| |||||||||||||||||||||||||||||| |||||||| || || Sbjct: 1773 tcaatgataccggtcttcaccatgtcaacatattcacctttagcagcatcataacccagg 1714 Query: 502 tcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcctgcatt 561 ||||| || ||||||||||||||||| || ||||| | |||| || || || || ||||| Sbjct: 1713 tcagtattttcttgctccaaaagctttcctacaacta-ctgctccctccaccccagcatt 1655 Query: 562 ggaagcgatagtgtacactggtgtcttcaaagcattctgaatgatttg 609 || || || |||| || ||||||||||||||||||||||||||||| Sbjct: 1654 tgaggcaattgtgtgtacaggtgtcttcaaagcattctgaatgatttg 1607
>dbj|AK073999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073C08, full insert sequence Length = 2223 Score = 186 bits (94), Expect = 6e-44 Identities = 200/234 (85%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 373 tctgttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcacc 432 ||||| || ||||| ||||| |||||||| ||||||||||||| || |||||||| || Sbjct: 1752 tctgtggtagtcattagagaggacacacttgcagcatccaccagagctgttctgataact 1693 Query: 433 tttagtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatca 492 ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 1692 tttagtgggtcaatgataccagacttcaccatgtcaacgtattcacctttagcagcatca 1633 Query: 493 tatccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctac 552 || || |||||||| ||||| || |||||||||||||||| || | | | |||||||| Sbjct: 1632 taacctagatcagtattatcctgttccaaaagcttgccaataatga-cagatccttctac 1574 Query: 553 gcctgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaatgat 606 || ||||| ||||| || |||| |||||| |||||||||||||| |||||||| Sbjct: 1573 acccgcattcgaagcaattgtgtgcactggggtcttcaaagcattttgaatgat 1520
>emb|BX825898.1|CNS0A57I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 943 Score = 151 bits (76), Expect = 3e-33 Identities = 191/228 (83%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||| |||| || |||||||||||| |||||||| ||||| || ||||||||||| || Sbjct: 658 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgttctgatcactttc 599 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 598 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcataa 539 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 || || || | ||||||||||||||| ||||||||||||| || | || ||||| || || Sbjct: 538 ccgaggtctgggttatcttgctccaagagcttgccaacaataa-cagcaccttcaactcc 480 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaat 603 ||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 479 agcatttgaagcgattgtgtaaacaggagtcttcaatgcgttctgaat 432
>ref|NM_113304.3| Arabidopsis thaliana HSP60; ATP binding / protein binding AT3G23990 (HSP60) mRNA, complete cds Length = 2119 Score = 143 bits (72), Expect = 8e-31 Identities = 190/228 (83%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1728 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1669 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1668 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcataa 1609 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 || || || | ||||||||||||||| ||||||||||||| || | || ||||| || || Sbjct: 1608 ccgaggtctgggttatcttgctccaagagcttgccaacaataa-cagcaccttcaactcc 1550 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaat 603 ||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 1549 agcatttgaagcgattgtgtaaacaggagtcttcaatgcgttctgaat 1502
>gb|BT010398.1| Arabidopsis thaliana At3g23990 mRNA, complete cds Length = 1734 Score = 143 bits (72), Expect = 8e-31 Identities = 190/228 (83%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1643 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1584 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1583 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcataa 1524 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 || || || | ||||||||||||||| ||||||||||||| || | || ||||| || || Sbjct: 1523 ccgaggtctgggttatcttgctccaagagcttgccaacaataa-cagcaccttcaactcc 1465 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaat 603 ||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 1464 agcatttgaagcgattgtgtaaacaggagtcttcaatgcgttctgaat 1417
>emb|Z11547.1|ATCHHSP60 A.thaliana mRNA for mitochondrial chaperonin hsp60 Length = 1998 Score = 143 bits (72), Expect = 8e-31 Identities = 190/228 (83%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1717 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1658 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1657 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcataa 1598 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 || || || | ||||||||||||||| ||||||||||||| || | || ||||| || || Sbjct: 1597 ccgaggtctgggttatcttgctccaagagcttgccaacaataa-cagcaccttcaactcc 1539 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaat 603 ||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 1538 agcatttgaagcgattgtgtaaacaggagtcttcaatgcgttctgaat 1491
>gb|AY099594.1| Arabidopsis thaliana mitochondrial chaperonin hsp60 (At3g23990) mRNA, complete cds Length = 1994 Score = 143 bits (72), Expect = 8e-31 Identities = 190/228 (83%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1728 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1669 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1668 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcataa 1609 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 || || || | ||||||||||||||| ||||||||||||| || | || ||||| || || Sbjct: 1608 ccgaggtctgggttatcttgctccaagagcttgccaacaataa-cagcaccttcaactcc 1550 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaat 603 ||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 1549 agcatttgaagcgattgtgtaaacaggagtcttcaatgcgttctgaat 1502
>gb|BT012804.1| Lycopersicon esculentum clone 113820R, mRNA sequence Length = 2008 Score = 135 bits (68), Expect = 2e-28 Identities = 180/216 (83%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 394 gacacactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgatacca 453 ||||||||||||||||| |||||||| || || || || || | ||| |||||||| || Sbjct: 1708 gacacactagcagcatcaaccaaggccgtcctaattactttcaatggatcaatgattcct 1649 Query: 454 accttcaccatgtcaacatattcacctttagctgcatcatatccaagatcagtgttatct 513 | || ||||||||||||||||||||||| || ||||||||||||||||| | |||||| Sbjct: 1648 gcttttaccatgtcaacatattcaccttttgcagcatcatatccaagatccgggttatcc 1589 Query: 514 tgctccaaaagcttgccaacaacaacctgccccttctacgcctgcattggaagcgatagt 573 |||||||| || |||||||| || | ||| ||||| || || ||||| || || || || Sbjct: 1588 tgctccaacagtttgccaaccacta-ctgatccttccaccccagcattagaggcaattgt 1530 Query: 574 gtacactggtgtcttcaaagcattctgaatgatttg 609 || |||||||||||||||||||||||||| ||||| Sbjct: 1529 atatactggtgtcttcaaagcattctgaataatttg 1494
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 131 bits (66), Expect = 3e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 121572 gcagcatccaccaaggcagttctgatcacttttagtgggtcaatgataccagccttcacc 121631 Query: 463 atgtcaacatattcacct 480 ||||| |||||||||||| Sbjct: 121632 atgtccacatattcacct 121649 Score = 103 bits (52), Expect = 7e-19 Identities = 101/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||||| Sbjct: 121739 acctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgacaac 121798 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 || | ||||||||||| ||||| |||||||| ||||||| ||| ||||||| |||| Sbjct: 121799 aa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtctgcaaa 121853 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 121277 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 121336 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatga 395 |||||||||||||||| || || || |||||||||||||| Sbjct: 121337 atctctacgatgatggattccgtggttgtcatcagagatga 121377 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 586 cttcaaagcattctgaatgatttgtac 612 ||||||||||||||||||||||||||| Sbjct: 121931 cttcaaagcattctgaatgatttgtac 121957
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 3e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 16538670 gcagcatccaccaaggcagttctgatcacttttagtgggtcaatgataccagccttcacc 16538611 Query: 463 atgtcaacatattcacct 480 ||||| |||||||||||| Sbjct: 16538610 atgtccacatattcacct 16538593 Score = 103 bits (52), Expect = 7e-19 Identities = 101/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||||| Sbjct: 16538503 acctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgacaac 16538444 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 || | ||||||||||| ||||| |||||||| ||||||| ||| ||||||| |||| Sbjct: 16538443 aa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtctgcaaa 16538389 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 16538965 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 16538906 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatga 395 |||||||||||||||| || || || |||||||||||||| Sbjct: 16538905 atctctacgatgatggattccgtggttgtcatcagagatga 16538865 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 586 cttcaaagcattctgaatgatttgtac 612 ||||||||||||||||||||||||||| Sbjct: 16538311 cttcaaagcattctgaatgatttgtac 16538285
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 3e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 16546911 gcagcatccaccaaggcagttctgatcacttttagtgggtcaatgataccagccttcacc 16546852 Query: 463 atgtcaacatattcacct 480 ||||| |||||||||||| Sbjct: 16546851 atgtccacatattcacct 16546834 Score = 103 bits (52), Expect = 7e-19 Identities = 101/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || ||||| Sbjct: 16546744 acctttagccgcatcatagccaaggtcggtgttatcttgttccaaaagcttaccgacaac 16546685 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaa 592 || | ||||||||||| ||||| |||||||| ||||||| ||| ||||||| |||| Sbjct: 16546684 aa-cagccccttctacacctgcgttggaagcaatagtgtgcaccggtgtctgcaaa 16546630 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 295 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 354 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 16547206 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 16547147 Query: 355 atctctacgatgatggcctctgttgtggtcatcagagatga 395 |||||||||||||||| || || || |||||||||||||| Sbjct: 16547146 atctctacgatgatggattccgtggttgtcatcagagatga 16547106 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 586 cttcaaagcattctgaatgatttgtac 612 ||||||||||||||||||||||||||| Sbjct: 16546552 cttcaaagcattctgaatgatttgtac 16546526
>gb|L21007.1|MZECPN60A Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60I) gene, complete cds Length = 6575 Score = 113 bits (57), Expect = 7e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 400 ctagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttc 459 ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||| Sbjct: 5671 ctagcagcatccaccaaagcagttctgataacctttagcgggtcaatgataccggtcttc 5612 Query: 460 accatgtcaacatattcacct 480 ||||||||||||||||||||| Sbjct: 5611 accatgtcaacatattcacct 5591 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||||| |||||||| || || ||||| || ||||||||||||||||| || ||||| Sbjct: 5470 acctttagcagcatcataacccaggtcagtattttcttgctccaaaagctttcctacaac 5411 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 296 attagtaatccattccacccatgccgcc 323 ||||||||||||| |||||||||||||| Sbjct: 5981 attagtaatccatgccacccatgccgcc 5954 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 586 cttcaaagcattctgaatgatttg 609 |||||||||||||||||||||||| Sbjct: 5283 cttcaaagcattctgaatgatttg 5260
>gb|L21008.1|MZECPN60B Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60II) gene, complete cds Length = 7905 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 400 ctagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttc 459 ||||||||||||||||| ||||||||||| |||||||| || |||||||||||| ||||| Sbjct: 6778 ctagcagcatccaccaatgcagttctgatgacctttagcggatcaatgataccagccttc 6719 Query: 460 accatgtcaacatattc 476 ||||||||||| ||||| Sbjct: 6718 accatgtcaacgtattc 6702 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 6599 acctttagcagcatcataaccaaggtcagtgtttccttgctccaaaagcttgcccacaac 6540 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 297 ttagtaatccattccacccatgccgcccatt 327 |||||||||||||||||||||||| |||||| Sbjct: 7126 ttagtaatccattccacccatgccacccatt 7096 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 586 cttcaaagcattctgaatgatttg 609 |||||||||||||||||||||||| Sbjct: 6412 cttcaaagcattctgaatgatttg 6389
>gb|AF489695.1| Prunus dulcis heat shock protein 60 (HSP60) mRNA, partial cds Length = 1887 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 370 gcctctgttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatc 429 |||||||| |||||||| | || ||||| || || ||||| |||||||| |||||||| Sbjct: 1563 gcctctgtcgtggtcattaacgaggacacgcttgcggcatcgaccaaggcggttctgatg 1504 Query: 430 acctttagtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgca 489 || || | ||| |||||||| || |||| | |||||| |||||||||||||| |||||| Sbjct: 1503 actttcaatggatcaatgatccctgcctttatcatgtctacatattcaccttttgctgca 1444 Query: 490 tcatatccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttc 549 || |||||||| |||| || || |||||||| || ||||||||||||| ||||||| || Sbjct: 1443 tcgtatccaaggtcaggattgtcctgctccaatagtttgccaacaacaa-ctgccccctc 1385 Query: 550 tacgcctgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaatgatttg 609 || || ||||| ||||| || ||| | || || |||| | |||||||||||| ||||| Sbjct: 1384 aactccagcattagaagcaattgtggatacaggcatcttaagagcattctgaataatttg 1325
>ref|NM_179872.1| Arabidopsis thaliana ATP binding / protein binding AT2G33210 mRNA, complete cds Length = 2094 Score = 97.6 bits (49), Expect = 4e-17 Identities = 173/213 (81%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 397 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 456 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1777 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1718 Query: 457 ttcaccatgtcaacatattcacctttagctgcatcatatccaagatcagtgttatcttgc 516 || | |||||| |||||||| |||||||| |||||||| ||||| |||| |||||||| Sbjct: 1717 tttatcatgtccacatattctcctttagcagcatcataaccaaggtcaggattatcttgt 1658 Query: 517 tccaaaagcttgccaacaacaacctgccccttctacgcctgcattggaagcgatagtgta 576 |||||||||||||| || |||| |||| || || || || ||||||||||| || ||||| Sbjct: 1657 tccaaaagcttgcctacgacaa-ctgcaccctcgactccagcattggaagcaatcgtgta 1599 Query: 577 cactggtgtcttcaaagcattctgaatgatttg 609 || |||||||| | || || ||||||||||| Sbjct: 1598 aacaggtgtcttgagtgcgttttgaatgatttg 1566
>gb|BT000103.1| Arabidopsis thaliana mitochondrial chaperonin HSP60 (At2g33210) mRNA, complete cds Length = 1799 Score = 97.6 bits (49), Expect = 4e-17 Identities = 173/213 (81%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 397 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 456 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1625 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1566 Query: 457 ttcaccatgtcaacatattcacctttagctgcatcatatccaagatcagtgttatcttgc 516 || | |||||| |||||||| |||||||| |||||||| ||||| |||| |||||||| Sbjct: 1565 tttatcatgtccacatattctcctttagcagcatcataaccaaggtcaggattatcttgt 1506 Query: 517 tccaaaagcttgccaacaacaacctgccccttctacgcctgcattggaagcgatagtgta 576 |||||||||||||| || |||| |||| || || || || ||||||||||| || ||||| Sbjct: 1505 tccaaaagcttgcctacgacaa-ctgcaccctcgactccagcattggaagcaatcgtgta 1447 Query: 577 cactggtgtcttcaaagcattctgaatgatttg 609 || |||||||| | || || ||||||||||| Sbjct: 1446 aacaggtgtcttgagtgcgttttgaatgatttg 1414
>gb|AY136360.1| Arabidopsis thaliana mitochondrial chaperonin HSP60 (At2g33210) mRNA, complete cds Length = 1982 Score = 97.6 bits (49), Expect = 4e-17 Identities = 173/213 (81%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 397 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 456 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1665 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1606 Query: 457 ttcaccatgtcaacatattcacctttagctgcatcatatccaagatcagtgttatcttgc 516 || | |||||| |||||||| |||||||| |||||||| ||||| |||| |||||||| Sbjct: 1605 tttatcatgtccacatattctcctttagcagcatcataaccaaggtcaggattatcttgt 1546 Query: 517 tccaaaagcttgccaacaacaacctgccccttctacgcctgcattggaagcgatagtgta 576 |||||||||||||| || |||| |||| || || || || ||||||||||| || ||||| Sbjct: 1545 tccaaaagcttgcctacgacaa-ctgcaccctcgactccagcattggaagcaatcgtgta 1487 Query: 577 cactggtgtcttcaaagcattctgaatgatttg 609 || |||||||| | || || ||||||||||| Sbjct: 1486 aacaggtgtcttgagtgcgttttgaatgatttg 1454
>dbj|AK175415.1| Arabidopsis thaliana mRNA for mitochondrial chaperonin (HSP60), complete cds, clone: RAFL21-85-D12 Length = 2089 Score = 97.6 bits (49), Expect = 4e-17 Identities = 173/213 (81%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 397 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 456 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1788 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1729 Query: 457 ttcaccatgtcaacatattcacctttagctgcatcatatccaagatcagtgttatcttgc 516 || | |||||| |||||||| |||||||| |||||||| ||||| |||| |||||||| Sbjct: 1728 tttatcatgtccacatattctcctttagcagcatcataaccaaggtcaggattatcttgt 1669 Query: 517 tccaaaagcttgccaacaacaacctgccccttctacgcctgcattggaagcgatagtgta 576 |||||||||||||| || |||| |||| || || || || ||||||||||| || ||||| Sbjct: 1668 tccaaaagcttgcctacgacaa-ctgcaccctcgactccagcattggaagcaatcgtgta 1610 Query: 577 cactggtgtcttcaaagcattctgaatgatttg 609 || |||||||| | || || ||||||||||| Sbjct: 1609 aacaggtgtcttgagtgcgttttgaatgatttg 1577
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 ||||||||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 2383499 gcagcatccaccagagctgttctgataacttttagtgggtcaatgataccagacttcacc 2383558 Query: 463 atgtcaacatattcacct 480 |||||||| ||||||||| Sbjct: 2383559 atgtcaacgtattcacct 2383576 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||| |||||||| || |||||||| ||||| || |||||||||||||||| Sbjct: 2383650 acctttagcagcatcataacctagatcagtattatcctgttccaaaagcttgccaa 2383705
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 ||||||||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 100341 gcagcatccaccagagctgttctgataacttttagtgggtcaatgataccagacttcacc 100400 Query: 463 atgtcaacatattcacct 480 |||||||| ||||||||| Sbjct: 100401 atgtcaacgtattcacct 100418 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||| |||||||| || |||||||| ||||| || |||||||||||||||| Sbjct: 100492 acctttagcagcatcataacctagatcagtattatcctgttccaaaagcttgccaa 100547
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 ||||||||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 2383609 gcagcatccaccagagctgttctgataacttttagtgggtcaatgataccagacttcacc 2383668 Query: 463 atgtcaacatattcacct 480 |||||||| ||||||||| Sbjct: 2383669 atgtcaacgtattcacct 2383686 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaa 532 ||||||||| |||||||| || |||||||| ||||| || |||||||||||||||| Sbjct: 2383760 acctttagcagcatcataacctagatcagtattatcctgttccaaaagcttgccaa 2383815
>emb|Z27165.1|BNMTCHA B.napus mRNA for mitochondrial chaperonin Length = 1952 Score = 83.8 bits (42), Expect = 6e-13 Identities = 187/234 (79%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||| |||| || ||| || ||||| |||||||| ||||| || ||||||||||| || Sbjct: 1694 gttgttgtcaacaaagacgagacacttgcagcatcaaccaatgcggttctgatcactttc 1635 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 | ||||| || |||||| ||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1634 acagggtcgataataccagacttcaccatatcaacgtattctcctttagcagcatcataa 1575 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 || || |||| |||||| |||||||||||||| |||| | |||| || || || || Sbjct: 1574 ccgaggtcaggattatctgattccaaaagcttgcctacaatga-ctgcaccctcgactcc 1516 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaatgatttg 609 || |||||||| || ||||| || |||||||| | ||| ||||| |||||||| Sbjct: 1515 agcgttggaagcaatggtgtaaacaggtgtcttgagagcgttctggatgatttg 1462
>emb|X70868.1|CSMCPN602 Cucurbita sp. pMCPN60-2 mRNA for chaperonin 60 Length = 2217 Score = 79.8 bits (40), Expect = 1e-11 Identities = 194/244 (79%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 366 gatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaaggcagttct 425 |||||| ||||| || ||||||| ||| || || ||||| ||||| |||| |||||||| Sbjct: 1801 gatggcttctgtagttgtcatcaaagaggaaacgctagcggcatcgaccagtgcagttct 1742 Query: 426 gatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagc 485 || || || || || |||||||| ||| | || | ||| || |||||||||||||| || Sbjct: 1741 aattactttaagaggatcaatgatgccagctttgatcatatccacatattcaccttttgc 1682 Query: 486 tgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccc 545 ||||| || |||||||||| ||| || |||||||| ||||| ||||| || | | |||| Sbjct: 1681 agcatcgtaaccaagatcagggttgtcctgctccaacagcttcccaaccacga-cagccc 1623 Query: 546 cttctacgcctgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaatga 605 | || || || ||||| || ||||| |||| || |||||||| | |||||||||||| | Sbjct: 1622 cctcaactcccgcattcgatgcgattgtgtgtacgggtgtctttagagcattctgaataa 1563 Query: 606 tttg 609 |||| Sbjct: 1562 tttg 1559 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 296 attagtaatccattccacccatgccgcc 323 |||||||||||||||| ||||||||||| Sbjct: 1874 attagtaatccattcctcccatgccgcc 1847
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/111 (83%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 ||||||||| |||||||| ||||| |||| |||||||| |||||||||||||| || || Sbjct: 24964 acctttagcagcatcataaccaaggtcaggattatcttgttccaaaagcttgcctacgac 24905 Query: 537 aacctgccccttctacgcctgcattggaagcgatagtgtacactggtgtct 587 || |||| || || || || ||||||||||| || ||||| || ||||||| Sbjct: 24904 aa-ctgcaccctcgactccagcattggaagcaatcgtgtaaacaggtgtct 24855
>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13 Length = 106203 Score = 67.9 bits (34), Expect = 4e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 475 tcacctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaaca 534 ||||||||||| |||||||| || || || | ||||||||||||||| |||||||||||| Sbjct: 74760 tcacctttagcagcatcataaccgaggtctgggttatcttgctccaagagcttgccaaca 74701 Query: 535 acaacctgccccttctacgcctgcattggaagcgatagtgta 576 | || | || ||||| || || ||||| |||||||| ||||| Sbjct: 74700 ataa-cagcaccttcaactccagcatttgaagcgattgtgta 74660 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 |||||||| ||||| || || |||||||| || || ||||| ||||| ||| | |||||| Sbjct: 74911 gcagcatcaaccaaagctgtcctgatcactttcagagggtctatgattccagctttcacc 74852 Query: 463 atgtcaacatattcacct 480 || || |||||||||||| Sbjct: 74851 atatccacatattcacct 74834 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 505 gtgttatcttgctccaaaagcttgccaacaa 535 ||||||||||||||||| ||||||| ||||| Sbjct: 78341 gtgttatcttgctccaagagcttgctaacaa 78311
>ref|NM_112240.2| Arabidopsis thaliana ATP binding / protein binding AT3G13860 mRNA, complete cds Length = 2022 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1720 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1661 Query: 475 tcacctttagctgcatc 491 | |||||| |||||||| Sbjct: 1660 ttacctttggctgcatc 1644
>gb|BT015923.1| Arabidopsis thaliana At3g13860 gene, complete cds Length = 1719 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1604 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1545 Query: 475 tcacctttagctgcatc 491 | |||||| |||||||| Sbjct: 1544 ttacctttggctgcatc 1528
>gb|BT013503.1| Lycopersicon esculentum clone 132191F, mRNA sequence Length = 2115 Score = 65.9 bits (33), Expect = 1e-07 Identities = 187/237 (78%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 |||||||||| ||||| || ||||| |||||||| ||||| || || |||||||| || Sbjct: 1773 gttgtggtcaaaagagacgagacactggcagcatcgaccaaagctgtcctgatcactttc 1714 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 | ||| || ||||| || |||| | ||| || ||||||||||| || || ||||||||| Sbjct: 1713 actggatcgatgattcctgcctttatcatatctacatattcacccttggccgcatcatat 1654 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaacctgccccttctacgcc 555 ||||||||| ||| || || ||||| | |||||||| || || || || ||||| || Sbjct: 1653 ccaagatcaaggttgtcctgatccaacaatttgccaaccacgaca-gcaccctctactcc 1595 Query: 556 tgcattggaagcgatagtgtacactggtgtcttcaaagcattctgaatgatttgtac 612 ||| || || || || || | ||||| ||||||| |||||||||||| |||||||| Sbjct: 1594 tgcgttagaggctattgtatgtactggcgtcttcagagcattctgaataatttgtac 1538
>gb|AY094453.1| Arabidopsis thaliana AT3g13860/MCP4_7 mRNA, complete cds Length = 1975 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1720 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1661 Query: 475 tcacctttagctgcatc 491 | |||||| |||||||| Sbjct: 1660 ttacctttggctgcatc 1644
>gb|AY056782.1| Arabidopsis thaliana AT3g13860/MCP4_7 mRNA, complete cds Length = 1974 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1719 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1660 Query: 475 tcacctttagctgcatc 491 | |||||| |||||||| Sbjct: 1659 ttacctttggctgcatc 1643
>gb|AY089145.1| Arabidopsis thaliana clone 38045 mRNA, complete sequence Length = 1925 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1672 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1613 Query: 475 tcacctttagctgcatc 491 | |||||| |||||||| Sbjct: 1612 ttacctttggctgcatc 1596
>emb|X70867.1|CSMCPN601 Cucurbita sp. pMCPN60-1 mRNA for chaperonin 60 Length = 2023 Score = 63.9 bits (32), Expect = 6e-07 Identities = 131/164 (79%) Strand = Plus / Minus Query: 376 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 435 ||||||||||||| ||| || ||||| || || || || | ||||||||||| || || Sbjct: 1676 gttgtggtcatcaaagaggaaacacttgcggcgtcaactagtgcagttctgattactttc 1617 Query: 436 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 495 || ||||| || || ||| | || ||||| || ||||||||||| || || |||||||| Sbjct: 1616 agagggtcgataatgccagctttgaccatatctacatattcaccctttgcagcatcataa 1557 Query: 496 ccaagatcagtgttatcttgctccaaaagcttgccaacaacaac 539 |||||||||| || || |||||||| ||||| ||||| ||||| Sbjct: 1556 ccaagatcagggtcgtcctgctccaagagcttaccaaccacaac 1513 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ttagtaatccattccacccatgcc 320 ||||||||||||||| |||||||| Sbjct: 1758 ttagtaatccattccgcccatgcc 1735
>gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete sequence Length = 107795 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 403 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 462 |||||||| ||||| |||||||| || || || || |||||||| || ||| | |||||| Sbjct: 7270 gcagcatcgaccaaagcagttctaattactttcagcgggtcaataatgccagctttcacc 7211 Query: 463 atgtcaacatattca 477 || |||||||||||| Sbjct: 7210 atatcaacatattca 7196 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 agatcagtgttatcttgctccaaaagcttgccaacaacaac 539 ||||||| ||| || |||||||| ||||| ||||||||||| Sbjct: 7071 agatcagggttgtcctgctccaatagcttaccaacaacaac 7031
>dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCP4 Length = 38810 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 415 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 474 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 26032 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 26091 Query: 475 tcacct 480 | |||| Sbjct: 26092 ttacct 26097
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 293 tggattagtaatccattccacccatgccgcccat 326 |||||||| ||||||| ||||||||||||||||| Sbjct: 1984029 tggattagaaatccataccacccatgccgcccat 1983996
>gb|L11654.1|ZMOGROESLA Zymomonas mobilis groESL operon: groES and groEL genes, complete cds Length = 2769 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 293 tggattagtaatccattccacccatgccgcccat 326 |||||||| ||||||| ||||||||||||||||| Sbjct: 2648 tggattagaaatccataccacccatgccgcccat 2615
>gb|AF387864.1|AF387864 Buchnera aphidicola (Rhopalosiphum padi) GroEL-related molecular chaperonin SymL (symL) gene, complete cds Length = 1647 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||||||||||||| Sbjct: 1641 cattccacccatgccgcccattcca 1617
>gb|AF387863.1|AF387863 Buchnera aphidicola (Rhopalosiphum maidis) GroEL-related molecular chaperonin SymL (symL) gene, complete cds Length = 1647 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||||||||||||| Sbjct: 1641 cattccacccatgccgcccattcca 1617
>gb|AY067276.1| Schmidtea mediterranea clone H.21.6h unknown mRNA sequence Length = 699 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 305 ccattccacccatgccgcccattcc 329 ||||||||||||||||||||||||| Sbjct: 144 ccattccacccatgccgcccattcc 168
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccaggtgcc 336 ||||||||||||||||||||||| ||| |||| Sbjct: 427684 ccattccacccatgccgcccattgcagctgcc 427653
>ref|XM_589340.2| PREDICTED: Bos taurus 60 kDa protein 1-like protein (LOC511913), mRNA Length = 2738 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccagg 332 |||||||||||||||| ||||||||||| Sbjct: 2224 ccattccacccatgccacccattccagg 2197
>ref|XM_880722.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 4 (LOC615700), mRNA Length = 2315 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccagg 332 |||||||||||||||| ||||||||||| Sbjct: 1816 ccattccacccatgccacccattccagg 1789
>ref|XM_867695.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 1 (LOC615700), mRNA Length = 2277 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccagg 332 |||||||||||||||| ||||||||||| Sbjct: 1778 ccattccacccatgccacccattccagg 1751
>ref|XM_880674.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 3 (LOC615700), mRNA Length = 1739 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccagg 332 |||||||||||||||| ||||||||||| Sbjct: 1240 ccattccacccatgccacccattccagg 1213
>ref|XM_880647.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 2 (LOC615700), mRNA Length = 1236 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccagg 332 |||||||||||||||| ||||||||||| Sbjct: 737 ccattccacccatgccacccattccagg 710
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 |||||| || ||||| || |||||||||| ||||| || |||||||| || |||||||| Sbjct: 123931 acctttggcggcatcgtaaccaagatcaggattatcctgttccaaaagtttaccaacaac 123990 Query: 537 aac 539 ||| Sbjct: 123991 aac 123993 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Plus Query: 406 gcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatg 465 ||||| |||||||| || || |||||||| | ||| ||||| || ||| | || ||||| Sbjct: 111885 gcatcaaccaaggcggtcctaatcaccttcaatggatcaataattccagctttaaccata 111944 Query: 466 tcaacatattcacct 480 ||||||||||||||| Sbjct: 111945 tcaacatattcacct 111959 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 477 acctttagctgcatcatatccaagatcagtgttatcttgctccaaaagcttgccaacaac 536 |||||| || ||||| || |||||||||| ||||| || ||||| || || |||||||| Sbjct: 112074 acctttggcggcatcgtaaccaagatcaggattatcctgttccaatagtttaccaacaac 112133 Query: 537 aacc 540 |||| Sbjct: 112134 aacc 112137
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 ccattccacccatgccgcccattccag 331 |||||||||||||||||||||| |||| Sbjct: 4526672 ccattccacccatgccgcccataccag 4526698
>emb|X57520.1|LMGROELSR L.micdadei DNA for gro ELS operon Length = 2770 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccatt 327 ||||||||||||||||||||||| Sbjct: 2085 ccattccacccatgccgcccatt 2063
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccag 331 ||||||||||||| ||||||||||||| Sbjct: 567579 ccattccacccataccgcccattccag 567553
>ref|NM_116478.2| Arabidopsis thaliana unknown protein AT4G02450 mRNA, complete cds Length = 1052 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 |||||||||||||||| ||||||||| Sbjct: 672 ccattccacccatgcctcccattcca 647
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 |||| ||||||||||||||||||||| Sbjct: 1680795 ccatgccacccatgccgcccattcca 1680770
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattccag 331 |||||||||||| ||||||||||||| Sbjct: 633766 cattccacccataccgcccattccag 633741
>gb|AY515128.1| Bartonella rattimassiliensis strain 16115 GroEL gene, partial cds Length = 1461 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 taatccattccacccatgccgcccattcca 330 ||||||||||| ||||| |||||||||||| Sbjct: 1461 taatccattccgcccattccgcccattcca 1432
>gb|AC165070.2| Phakopsora pachyrhizi clone JGIAFNA-829C10, complete sequence Length = 26958 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 305 ccattccacccatgccgcccattccaggtg 334 ||||||| ||||| |||||||||||||||| Sbjct: 24693 ccattccgcccattccgcccattccaggtg 24722
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 ||||||||||||| |||||||||||| Sbjct: 640240 ccattccacccataccgcccattcca 640215
>gb|BT000527.1| Arabidopsis thaliana unknown protein (At4g02450/T14P8_5) mRNA, complete cds Length = 726 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 |||||||||||||||| ||||||||| Sbjct: 559 ccattccacccatgcctcccattcca 534
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 699150 ccattccacccatgccgcccat 699129
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 ccattccacccatgccgcccattcca 330 |||||||||||||||| ||||||||| Sbjct: 110025 ccattccacccatgcctcccattcca 110050
>emb|AJ606101.1| Oleispira antarctica pBK-CMV fragment cpn10 gene, estRB8 gene and cpn60DR gene, strain RB8 Length = 5373 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 2078 ccattccacccatgccgcccat 2057
>emb|AJ606100.1| Oleispira antarctica pBK-CMV fragment cpn10 gene, estRB8 gene and cpn60SR gene, strain RB8 Length = 5373 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 2078 ccattccacccatgccgcccat 2057
>emb|AJ505131.1|OAN505131 Oleispira antarctica cpn10 gene for cochaperonin 10 and cpn60 gene for chaperonin 60 Length = 2783 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 2423 ccattccacccatgccgcccat 2402
>gb|AY126999.1| Arabidopsis thaliana AT4g02450/T14P8_5 mRNA, complete cds Length = 1031 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 |||||||||||||||| ||||||||| Sbjct: 671 ccattccacccatgcctcccattcca 646
>emb|AJ606099.1| Oleispira antarctica pBK1CpnEst fragment cpn10 gene, cpn60 gene and estRB8 gene, strain RB8 Length = 5373 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 2078 ccattccacccatgccgcccat 2057
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 |||| ||||||||||||||||||||| Sbjct: 166223 ccatgccacccatgccgcccattcca 166198
>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8 Length = 94536 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcca 330 |||||||||||||||| ||||||||| Sbjct: 36589 ccattccacccatgcctcccattcca 36564
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 691840 ccattccacccatgccgcccat 691819
>gb|DQ138690.1| Drosophila yakuba strain T33 CG17304 gene, partial cds Length = 504 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 289 ccattccacccatgccgcccat 268
>gb|DQ138689.1| Drosophila yakuba strain Tai18 CG17304 gene, partial cds Length = 504 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccat 326 |||||||||||||||||||||| Sbjct: 286 ccattccacccatgccgcccat 265
>emb|AL683876.5| Mouse DNA sequence from clone RP23-100E6 on chromosome 2, complete sequence Length = 207486 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Plus Query: 396 cacactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgat 449 ||||| ||||||||||| ||||||||||| | |||||| |||||||||||| Sbjct: 54841 cacaccagcagcatccagtaaggcagttcttacaacctttgttgggtcaatgat 54894
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 ||||||||||||| ||||||||||| Sbjct: 563660 ccattccacccattccgcccattcc 563636
>gb|BC068415.1| Danio rerio heat shock 60kD protein 1 (chaperonin), mRNA (cDNA clone MGC:85875 IMAGE:6966920), complete cds Length = 2739 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 1752 ccattccacccatgcctcccattcc 1728
>gb|AY596454.1| Cytophaga sp. FIRDI-133-V546 chaperonin 60 (cpn60) gene, complete cds Length = 1641 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 ||||||||||||| ||||||||||| Sbjct: 1627 ccattccacccataccgcccattcc 1603
>gb|BC044557.1| Danio rerio heat shock 60kD protein 1 (chaperonin), mRNA (cDNA clone MGC:55967 IMAGE:3819432), complete cds Length = 2253 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 1781 ccattccacccatgcctcccattcc 1757
>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence Length = 114020 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 acaataaaattacatcaaaga 225 ||||||||||||||||||||| Sbjct: 70892 acaataaaattacatcaaaga 70912
>ref|XM_568675.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN01940) partial mRNA Length = 1547 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 ||||||||||||| ||||||||||| Sbjct: 1269 ccattccacccattccgcccattcc 1245
>emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in linkage group 9, complete sequence Length = 292409 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 271085 ccattccacccatgcctcccattcc 271109
>emb|BX936402.12| Zebrafish DNA sequence from clone CH211-128D20 in linkage group 9, complete sequence Length = 156082 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 17280 ccattccacccatgcctcccattcc 17256
>ref|NM_181330.3| Danio rerio heat shock 60kD protein 1 (chaperonin) (hspd1), mRNA Length = 2739 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 1752 ccattccacccatgcctcccattcc 1728
>gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, complete sequence Length = 213855 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 acaacaacctgccccttctac 552 ||||||||||||||||||||| Sbjct: 102986 acaacaacctgccccttctac 102966
>ref|XM_501542.1| Yarrowia lipolytica CLIB122, YALI0C07040g predicted mRNA Length = 1821 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tccacccatgccgcccattcc 329 ||||||||||||||||||||| Sbjct: 1416 tccacccatgccgcccattcc 1396
>gb|AF461397.1| Chlamydomonas reinhardtii retinal binding protein (cop4) gene, complete cds Length = 2241 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 2122 ccattccacccatgcctcccattcc 2098
>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24 Length = 294850 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 204061 ccattccacccatgcctcccattcc 204037
>emb|AJ439087.1|BAP439087 Buchnera aphidicola (Chaetophorus leucomelas) groEL gene Length = 1656 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 1650 cattccacccatgccacccattcca 1626
>emb|AJ344981.1|BSP344981 Buchnera sp. 389 partial groEL gene Length = 1608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 1608 cattccacccatgccacccattcca 1584
>emb|AJ344978.1|BSP344978 Buchnera sp. 150 groES gene for GroES- related molecular chaperonin and groEL gene Length = 2028 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 2008 cattccacccatgccacccattcca 1984
>emb|AJ344977.1|BSP344977 Buchnera sp. N27 groES gene for GroES- related molecular chaperonin and groEL gene Length = 2021 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 2008 cattccacccatgccacccattcca 1984
>emb|AJ344976.1|BSP344976 Buchnera sp. partial groEL gene (from Rhopalosiphum maidis) Length = 1621 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 1608 cattccacccatgccacccattcca 1584
>gb|AF508968.1| Chlamydomonas reinhardtii sensory opsin B (CSOB) gene, complete cds Length = 7143 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 5475 ccattccacccatgcctcccattcc 5451
>gb|AF508966.1| Chlamydomonas reinhardtii sensory opsin B (CSOB) mRNA, complete cds Length = 3599 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 2125 ccattccacccatgcctcccattcc 2101
>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence Length = 173391 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gatggcctctgttgtggtcat 386 ||||||||||||||||||||| Sbjct: 9886 gatggcctctgttgtggtcat 9866
>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence Length = 161276 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gatggcctctgttgtggtcat 386 ||||||||||||||||||||| Sbjct: 99256 gatggcctctgttgtggtcat 99236
>gb|AF434719.1|AF434719 Buchnera aphidicola (Schizaphis graminum) SymL (symL) gene, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 1641 cattccacccatgccacccattcca 1617
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 294 ggattagtaatccattccacccatgccgcccat 326 ||||||| | ||||| ||||||||||||||||| Sbjct: 6729372 ggattagaagtccatgccacccatgccgcccat 6729404 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 gattagtaatccattccacccatgccgcccat 326 |||||| ||||||| || |||||||||||||| Sbjct: 4687259 gattagaaatccatgccgcccatgccgcccat 4687290
>emb|BX571722.18| Zebrafish DNA sequence from clone DKEY-96O13 in linkage group 9, complete sequence Length = 228214 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 54844 ccattccacccatgcctcccattcc 54820
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 cattccacccatgccgcccattcca 330 |||||||||||| |||||||||||| Sbjct: 1494171 cattccacccataccgcccattcca 1494195
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 |||||||||||| |||||||||||| Sbjct: 1170293 cattccacccataccgcccattcca 1170269
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tccacccatgccgcccattcc 329 ||||||||||||||||||||| Sbjct: 943489 tccacccatgccgcccattcc 943469
>gb|U77380.1|RPU77380 Rhopalosiphum padi endosymbiont GroEL-related molecular chaperonin SymL (symL) gene, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 ||||||||||||||| ||||||||| Sbjct: 1641 cattccacccatgccacccattcca 1617
>emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chromosome 2, complete sequence Length = 131825 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 cctctttctcctctttaggaa 355 ||||||||||||||||||||| Sbjct: 6633 cctctttctcctctttaggaa 6653
>gb|M91030.1|HEAGROESL Haemophilus ducreyi heat shock protein (groES and groEL) gene, complete cds Length = 2200 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcca 330 |||||||||||| |||||||||||| Sbjct: 2110 cattccacccataccgcccattcca 2086
>dbj|AB058891.1| Chlamydomonas reinhardtii acop2 mRNA for archaeal-type opsin 2, complete cds Length = 2448 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattcc 329 |||||||||||||||| |||||||| Sbjct: 2121 ccattccacccatgcctcccattcc 2097
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 catgccgcccattccaggtg 334 |||||||||||||||||||| Sbjct: 1076015 catgccgcccattccaggtg 1075996
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgccc 324 |||||||||||||||||||| Sbjct: 636104 ccattccacccatgccgccc 636085
>ref|XM_475802.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 439 gggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 494 ||||| ||||| ||| |||| | |||||||||||| || ||| | ||||||||||| Sbjct: 1895 gggtcgatgatcccagccttaatcatgtcaacatactcccctcttgctgcatcata 1840
>ref|XM_513830.1| PREDICTED: Pan troglodytes LOC457337 (LOC457337), mRNA Length = 3355 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 1945 acaacctgccccttctgcgcctgc 1968
>gb|L21708.2|PFA34K Plasmodium berghei p23-like protein mRNA, partial cds Length = 1311 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ccacccatgccgcccattcc 329 |||||||||||||||||||| Sbjct: 124 ccacccatgccgcccattcc 105
>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete sequence Length = 214489 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 attcatggattagtaatcca 307 |||||||||||||||||||| Sbjct: 191938 attcatggattagtaatcca 191919
>emb|AJ130877.1|PAC130877 Plectus acuminatus mRNA for heat shock protein 60 (HSP60) Length = 2068 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ccacccatgccgcccattcc 329 |||||||||||||||||||| Sbjct: 1796 ccacccatgccgcccattcc 1777
>gb|AC125095.3| Mus musculus BAC clone RP24-179H12 from chromosome 14, complete sequence Length = 147123 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 agttccgtttggaacatcgc 176 |||||||||||||||||||| Sbjct: 90139 agttccgtttggaacatcgc 90120
>gb|AC122470.3| Mus musculus BAC clone RP24-320O6 from chromosome 18, complete sequence Length = 190916 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 attcatggattagtaatcca 307 |||||||||||||||||||| Sbjct: 77581 attcatggattagtaatcca 77562
>ref|XM_675144.1| Plasmodium berghei strain ANKA hypothetical protein (PB001312.02.0) partial mRNA Length = 804 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ccacccatgccgcccattcc 329 |||||||||||||||||||| Sbjct: 488 ccacccatgccgcccattcc 469
>emb|X61150.1|APSYMSL Acyrthosiphon pisum endosymbiont symS and symL genes for symbionin Length = 2739 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcc 329 ||||||||||||||| |||||||| Sbjct: 2204 cattccacccatgccacccattcc 2181
>emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chromosome 9 Contains a CpG island, complete sequence Length = 154698 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 tggtgtcttcaaagcattct 599 |||||||||||||||||||| Sbjct: 144801 tggtgtcttcaaagcattct 144820
>emb|AL358472.54| Human DNA sequence from clone RP11-422P24 on chromosome 1 Contains the 5' UTR of the gene for transcription repressor p66 beta component of the MeCP1 complex (P66beta), the KIAA0476 gene for a novel protein, the gene for transducer of regulated cAMP response element-binding protein (CREB) 2 (TORC2), the SLC39A1 gene for solute carrier family 39 (zinc transporter), member 1, the CREB3L4 gene for cAMP responsive element binding protein 3-like 4, the JTB gene for jumping translocation breakpoint, the RAB13 gene for RAB13, member RAS oncogene family, the RPS27 gene for ribosomal protein S27 (metallopanstimulin 1), the 3' end of the gene for nuclear pore membrane glycoprotein 210-like (LOC91181), a ribosomal protein S7 (RPS7) pseudogene and a CpG island, complete sequence Length = 175827 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 13557 acaacctgccccttctgcgcctgc 13534
>emb|AL133415.13| Human DNA sequence from clone RP11-124N14 on chromosome 10 Contains the 5' end of the DNMT2 gene for DNA (cytosine-5-)-methyltransferase 2, two novel genes, the VIM gene for vimentin and two CpG islands, complete sequence Length = 94168 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcccagtttgcttcatatat 280 |||||||||||||||||||| Sbjct: 4898 tcccagtttgcttcatatat 4879
>emb|Z66568.2|SPAC12G12 S.pombe chromosome I cosmid c12G12 Length = 32095 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cattccacccatgccgcccattcc 329 ||||||||||||||| |||||||| Sbjct: 23156 cattccacccatgccacccattcc 23179
>dbj|AK124049.1| Homo sapiens cDNA FLJ42055 fis, clone SPLEN2042714 Length = 2530 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 335 acaacctgccccttctgcgcctgc 358
>ref|XM_689311.1| PREDICTED: Danio rerio similar to single-stranded DNA-binding protein isoform a (LOC573517), mRNA Length = 564 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 tccattccacccatgccgcccatt 327 ||||| |||||||||||||||||| Sbjct: 245 tccatgccacccatgccgcccatt 222
>ref|XM_940218.1| PREDICTED: Homo sapiens KIAA0476, transcript variant 7 (KIAA0476), mRNA Length = 5359 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 3631 acaacctgccccttctgcgcctgc 3654
>ref|XM_944500.1| PREDICTED: Homo sapiens KIAA0476, transcript variant 12 (KIAA0476), mRNA Length = 5108 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 3380 acaacctgccccttctgcgcctgc 3403
>ref|XM_944494.1| PREDICTED: Homo sapiens KIAA0476, transcript variant 9 (KIAA0476), mRNA Length = 4566 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 2838 acaacctgccccttctgcgcctgc 2861
>ref|XM_375806.3| PREDICTED: Homo sapiens KIAA0476, transcript variant 1 (KIAA0476), mRNA Length = 5359 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 3631 acaacctgccccttctgcgcctgc 3654
>ref|XM_934794.1| PREDICTED: Homo sapiens KIAA0476, transcript variant 6 (KIAA0476), mRNA Length = 5108 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 3380 acaacctgccccttctgcgcctgc 3403
>ref|XM_934791.1| PREDICTED: Homo sapiens KIAA0476, transcript variant 3 (KIAA0476), mRNA Length = 4566 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 2838 acaacctgccccttctgcgcctgc 2861
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cattccacccatgccgcccattcc 329 |||||| ||||||||||||||||| Sbjct: 2293919 cattccgcccatgccgcccattcc 2293942
>ref|NM_001018294.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC12G12.04), partial mRNA Length = 1749 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcc 329 ||||||||||||||| |||||||| Sbjct: 1734 cattccacccatgccacccattcc 1711
>dbj|AB007945.2| Homo sapiens mRNA for KIAA0476 protein, partial cds Length = 5688 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 acaacctgccccttctacgcctgc 558 |||||||||||||||| ||||||| Sbjct: 3954 acaacctgccccttctgcgcctgc 3977
>gb|AE004677.1| Pseudomonas aeruginosa PAO1, section 238 of 529 of the complete genome Length = 9950 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ccattccacccatgccgccc 324 |||||||||||||||||||| Sbjct: 7749 ccattccacccatgccgccc 7730
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcc 329 ||||||||||||||| |||||||| Sbjct: 20355 cattccacccatgccacccattcc 20332
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 aatccattccacccatgccg 321 |||||||||||||||||||| Sbjct: 5081134 aatccattccacccatgccg 5081115
>emb|AJ236837.1|HVU236837 Hordeum vulgare partial mRNA for putative senescence specific alpha-galactosidase Length = 447 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ccacccatgccgcccattcc 329 |||||||||||||||||||| Sbjct: 22 ccacccatgccgcccattcc 3
>dbj|AK070127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045O03, full insert sequence Length = 2139 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 439 gggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 494 ||||| ||||| ||| |||| | |||||||||||| || ||| | ||||||||||| Sbjct: 1661 gggtcgatgatcccagccttaatcatgtcaacatactcccctcttgctgcatcata 1606
>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4, complete sequence Length = 205347 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cccaacactcatcccaacac 155 |||||||||||||||||||| Sbjct: 9558 cccaacactcatcccaacac 9577
>emb|Z85144.1|HSZ85144 H.sapiens Ig lambda light chain variable region gene (4-21OIIIIC85) rearranged; Ig-Light-Lambda; VLambda Length = 347 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 ttggaagcgatagtgtacactggt 583 ||||||| |||||||||||||||| Sbjct: 137 ttggaagtgatagtgtacactggt 160
>emb|Z85123.1|HSZ85123 H.sapiens Ig lambda light chain variable region gene (3-33) rearranged; Ig-Light-Lambda; VLambda Length = 347 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 ttggaagcgatagtgtacactggt 583 ||||||| |||||||||||||||| Sbjct: 137 ttggaagtgatagtgtacactggt 160
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 attcacctttagctgcatca 492 |||||||||||||||||||| Sbjct: 1074883 attcacctttagctgcatca 1074864
>gb|AC151578.1| Mus musculus BAC clone RP23-218K4 from 18, complete sequence Length = 192387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 attcatggattagtaatcca 307 |||||||||||||||||||| Sbjct: 182727 attcatggattagtaatcca 182746
>gb|M22383.1|CRUP1P Chinese hamster P1 protein mRNA, complete cds Length = 2238 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 ccattccacccatgccgcccattccagg 332 ||||||||||||| ||||||||||||| Sbjct: 1735 ccattccacccattgcgcccattccagg 1708
>dbj|D50609.1|YSPHSPH Fission yeast gene for mitochondrial heat-shock protein (HSP60), complete cds Length = 4118 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 cattccacccatgccgcccattcc 329 ||||||||||||||| |||||||| Sbjct: 3306 cattccacccatgccacccattcc 3283
>gb|U04320.1|RRU04320 Rattus norvegicus Wistar alpha B-crystallin gene, complete cds Length = 6806 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ggtgcctctttctcctcttt 350 |||||||||||||||||||| Sbjct: 2688 ggtgcctctttctcctcttt 2707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,103,211 Number of Sequences: 3902068 Number of extensions: 5103211 Number of successful extensions: 97348 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96589 Number of HSP's gapped (non-prelim): 733 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)