>MURG_AGRT5 (Q8UDM8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 378

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = +1

Query: 118 DLLTRIGNEPMVTTSSGASNVTTISKL----ILTPFSHNFD 228
           D+ +RIG   +V + SGAS V+ +S +    IL P+ H  D
Sbjct: 251 DMASRIGEADLVISRSGASTVSELSVIGRPSILVPYPHALD 291

>SP4_BACME (P41028) Putative stage IV sporulation protein|
          Length = 247

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 247 SGFGLGFSTFFQYCCFPSMLVFKVEVCG 330
           SGF LGF +FF    F S +V+KVE+ G
Sbjct: 89  SGFRLGFLSFFIILGFVSNMVWKVEISG 116

>XPR6_YARLI (P42781) Dibasic-processing endoprotease precursor (EC 3.4.21.-)|
          Length = 976

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -3

Query: 482 SEKMHDFNGIKQQDAVE-KKAGSEAEKENGHQESYCNGKQDDEK 354
           ++K  D  G K++D  + KK G EA+KE   +++  + K+D E+
Sbjct: 175 AQKAQDDKGDKKEDQKDDKKEGQEAQKEGDKEDNKGDDKEDGEE 218

>T2FA_XENLA (Q04870) Transcription initiation factor IIF alpha subunit (EC|
           2.7.11.1) (TFIIF-alpha) (Transcription initiation factor
           RAP74)
          Length = 524

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
 Frame = -3

Query: 452 KQQDAVEKKAGSEAEKENGHQESYCNGKQDDEKVPRXXXXXXXXXXXXXSMDGKQQ---Y 282
           +Q ++ E+    +AE+E G +E      QD++K  +              +DG       
Sbjct: 308 EQSESSEESEEEKAEEEEGEEEKKAPTPQDNKKKKKGDSSDESETSEDSDIDGASSSLFM 367

Query: 281 WKKVENPKPNPEGAGH*SSK 222
            KK   PK + +G  + SS+
Sbjct: 368 QKKKTPPKKDKKGGSNSSSR 387

>SANT_PLAF7 (Q03400) S-antigen protein precursor|
          Length = 585

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 497 EIQNMSEKMHDFNG--IKQQDAVEKKA-GSEAEKENGHQESYCNGKQDD 360
           E  N  E  +D     IK Q+ VE++  GSE E  NG ++   NG +D+
Sbjct: 72  EDSNSEESNNDEENELIKGQEGVEQETHGSEDEVSNGREDKVSNGGEDE 120

>HSP90_EIMTE (O44001) Heat shock protein 90|
          Length = 713

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -3

Query: 479 EKMHDFNGIKQQDAVEKKAGSEAEKENGHQESYCNGKQDDEK 354
           EK H+    + +D  EKKA  +AE++ G ++     K++ E+
Sbjct: 211 EKTHEREVTESEDEEEKKADEKAEEKEGEEKKEGEEKKEGEE 252

>AKP8L_HUMAN (Q9ULX6) A-kinase anchor protein 8-like (AKAP8-like protein)|
           (Neighbor of A-kinase anchoring protein 95) (Neighbor of
           AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase
           A-binding protein 95) (HAP95)
          Length = 646

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 458 GIKQQDAVEKKAGSEAEKENGHQESYCNGKQDDEK 354
           G++  +AVEK +  + E E G ++    GK+D EK
Sbjct: 315 GLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEK 349

>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 359 HHPACHYNSFLDAHFLSQLHYQLFFQQHP 445
           HHPA H++  L  H+  Q  +Q   QQ P
Sbjct: 30  HHPALHHHPVLQHHYSLQQQHQQQQQQQP 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,516,897
Number of Sequences: 219361
Number of extensions: 1348589
Number of successful extensions: 3381
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3379
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)