>gb|AY110326.1| Zea mays CL27593_1 mRNA sequence
          Length = 1259

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 262 ggattttccaccttcttccagtattgttgcttcccatcc 300
           |||||||| |||||||||||||| || || |||||||||
Sbjct: 837 ggattttcgaccttcttccagtactgctgtttcccatcc 875

>ref|NM_183853.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1500

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 474  cttctctgacatgttctgtatctccaatgttctgtctatcag 515
            |||| ||||||| ||||||||| ||  |||||||||||||||
Sbjct: 1032 cttcactgacatattctgtatcaccggtgttctgtctatcag 991

>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
             complete sequence
          Length = 144811

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 40    ttaaagctggaataacaactgg 61
             ||||||||||||||||||||||
Sbjct: 98756 ttaaagctggaataacaactgg 98777

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 40       ttaaagctggaataacaactgg 61
                ||||||||||||||||||||||
Sbjct: 21449006 ttaaagctggaataacaactgg 21449027

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 474      cttctctgacatgttctgtatctccaatgttctgtctatcag 515
                |||| ||||||| ||||||||| ||  |||||||||||||||
Sbjct: 12712874 cttcactgacatattctgtatcaccggtgttctgtctatcag 12712833

>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0554D10
          Length = 158723

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 474   cttctctgacatgttctgtatctccaatgttctgtctatcag 515
             |||| ||||||| ||||||||| ||  |||||||||||||||
Sbjct: 79903 cttcactgacatattctgtatcaccggtgttctgtctatcag 79862

>dbj|AK107331.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-F04, full
           insert sequence
          Length = 1733

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 474 cttctctgacatgttctgtatctccaatgttctgtctatcag 515
           |||| ||||||| ||||||||| ||  |||||||||||||||
Sbjct: 202 cttcactgacatattctgtatcaccggtgttctgtctatcag 161

>dbj|AK073536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041N22, full
            insert sequence
          Length = 2781

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 474  cttctctgacatgttctgtatctccaatgttctgtctatcag 515
            |||| ||||||| ||||||||| ||  |||||||||||||||
Sbjct: 1952 cttcactgacatattctgtatcaccggtgttctgtctatcag 1911

>dbj|AB059237.1| Oryza sativa IAI1 mRNA for hypothetical protein, complete cds
          Length = 2467

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 474  cttctctgacatgttctgtatctccaatgttctgtctatcag 515
            |||| ||||||| ||||||||| ||  |||||||||||||||
Sbjct: 1824 cttcactgacatattctgtatcaccggtgttctgtctatcag 1783

>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 180339

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 484   atgttctgtatctccaatgtt 504
             |||||||||||||||||||||
Sbjct: 28983 atgttctgtatctccaatgtt 28963

>gb|AC159900.3| Mus musculus BAC clone RP23-48H10 from chromosome 9, complete sequence
          Length = 194510

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 385   ctttcttgatgcccattttct 405
             |||||||||||||||||||||
Sbjct: 56041 ctttcttgatgcccattttct 56021

>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724
          Length = 820587

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 518    caccaccaaattttggcagct 538
              |||||||||||||||||||||
Sbjct: 305662 caccaccaaattttggcagct 305642

>gb|AC154107.3| Mus musculus BAC clone RP23-67L1 from chromosome 8, complete sequence
          Length = 246658

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    cttgccattacaatagcttt 388
              ||||||||||||||||||||
Sbjct: 147476 cttgccattacaatagcttt 147457

>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence
          Length = 200605

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   tcaggtgcctccaatgtgac 182
             ||||||||||||||||||||
Sbjct: 96151 tcaggtgcctccaatgtgac 96132

>gb|AC126428.3| Mus musculus BAC clone RP24-387B13 from chromosome 10, complete sequence
          Length = 225663

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    gtgcctccaatgtgacaaca 186
              ||||||||||||||||||||
Sbjct: 167420 gtgcctccaatgtgacaaca 167439

>gb|AC121961.2| Mus musculus BAC clone RP24-255E8 from 10, complete sequence
          Length = 162752

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gtgcctccaatgtgacaaca 186
             ||||||||||||||||||||
Sbjct: 12726 gtgcctccaatgtgacaaca 12745

>gb|AC101229.8| Mus musculus chromosome 8, clone RP23-96L20, complete sequence
          Length = 213812

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   cttgccattacaatagcttt 388
             ||||||||||||||||||||
Sbjct: 27599 cttgccattacaatagcttt 27580

>emb|AL513184.7| Human DNA sequence from clone RP11-386H19 on chromosome 6 Contains part
             of the UTRN gene for utrophin (homologous to dystrophin),
             complete sequence
          Length = 81461

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    agctggaccaggaagagagactag 85
             |||||||||||||| |||||||||
Sbjct: 16710 agctggaccaggaacagagactag 16687

>gb|AC103739.4| Homo sapiens chromosome 15, clone CTD-3065B20, complete sequence
          Length = 161386

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   caatggtcacaacatcttca 165
             ||||||||||||||||||||
Sbjct: 90779 caatggtcacaacatcttca 90760

>emb|AL117348.26|HSDJ559A3 Human DNA sequence from clone RP4-559A3 on chromosome 1q41-42.2
             Contains the 5' end of a novel gene (KIAA0792), the LEFTB
             gene for left-right determination, factor B, the PYCR2
             gene for pyrroline-5-carboxylate reductase family, member
             2, the EBAF gene for endometrial bleeding associated
             factor (left-right determination, factor A; transforming
             growth factor beta superfamily), a novel gene, an NADH
             dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
             (NDUFA3) pseudogene and two CpG islands, complete sequence
          Length = 127736

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   gatgcccattttctttctca 411
             ||||||||||||||||||||
Sbjct: 26425 gatgcccattttctttctca 26406

>gb|AF397423.1| Homo sapiens SOST gene, 3' UTR, MEOX1 gene, 5' UTR, and SOST/MEOX1
             intergenic region
          Length = 93790

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   acagcatcctgttgtttgat 455
             ||||||||||||||||||||
Sbjct: 12196 acagcatcctgttgtttgat 12215

>emb|BX248391.22| Zebrafish DNA sequence from clone CH211-212M14 in linkage group 17,
              complete sequence
          Length = 202287

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    aatatccaagctaatattaa 205
              ||||||||||||||||||||
Sbjct: 170158 aatatccaagctaatattaa 170177

>emb|BX539349.17| Zebrafish DNA sequence from clone DKEY-74L17 in linkage group 17,
             complete sequence
          Length = 140881

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aatatccaagctaatattaa 205
             ||||||||||||||||||||
Sbjct: 52537 aatatccaagctaatattaa 52518

>gb|AC116156.3| Homo sapiens chromosome 11, clone RP11-44D14, complete sequence
          Length = 176597

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   tgacatgttctgtatctcca 499
             ||||||||||||||||||||
Sbjct: 84772 tgacatgttctgtatctcca 84753

>gb|AC055813.9| Homo sapiens chromosome 17, clone RP11-209M4, complete sequence
          Length = 80117

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   acagcatcctgttgtttgat 455
             ||||||||||||||||||||
Sbjct: 50585 acagcatcctgttgtttgat 50566

>gb|AF124851.1|AF124851 Oenococcus oeni arginine deiminase (arcA), catabolic ornithine
            transcarbamylase (arcB), and carbamate kinase (arcC)
            genes, complete cds
          Length = 5624

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  ttttcaaggtagaagtttgt 327
            ||||||||||||||||||||
Sbjct: 3328 ttttcaaggtagaagtttgt 3347

>ref|NG_004221.1| Homo sapiens olfactory receptor, family 52, subfamily N, member 3
           pseudogene (OR52N3P) on chromosome 11
          Length = 1158

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 480 tgacatgttctgtatctcca 499
           ||||||||||||||||||||
Sbjct: 732 tgacatgttctgtatctcca 751

>tpg|BK004567.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR11-60 pseudogene,
           complete sequence
          Length = 958

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 480 tgacatgttctgtatctcca 499
           ||||||||||||||||||||
Sbjct: 632 tgacatgttctgtatctcca 651

>gb|AC098807.3| Papio anubis clone RP41-157N15, complete sequence
          Length = 212643

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   tttctcagcttcactaccag 424
             ||||||||||||||||||||
Sbjct: 26173 tttctcagcttcactaccag 26154

>gb|AC151991.2| Mus musculus BAC clone RP23-216P20 from 8, complete sequence
          Length = 174533

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    cttgccattacaatagcttt 388
              ||||||||||||||||||||
Sbjct: 146935 cttgccattacaatagcttt 146954

>emb|AL451051.6| Human DNA sequence from clone RP11-293L15 on chromosome 1 Contains the
             5' end of a novel gene and a CpG island, complete sequence
          Length = 76771

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    aggaagagagactagaaacg 90
             ||||||||||||||||||||
Sbjct: 15036 aggaagagagactagaaacg 15055

>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence
          Length = 206312

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tcaggtgcctccaatgtgac 182
             ||||||||||||||||||||
Sbjct: 33664 tcaggtgcctccaatgtgac 33683

>gb|AC132618.3| Mus musculus BAC clone RP23-238K12 from 6, complete sequence
          Length = 155828

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   ctccaatgtgacaacaatat 190
             ||||||||||||||||||||
Sbjct: 22427 ctccaatgtgacaacaatat 22408

>gb|AC153822.13| Mus musculus 10 BAC RP23-56N1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217746

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gcaatgagccaatggtcaca 156
              ||||||||||||||||||||
Sbjct: 184718 gcaatgagccaatggtcaca 184737

>gb|AC131574.4| Homo sapiens chromosome 11, clone RP11-957H15, complete sequence
          Length = 166214

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    tgacatgttctgtatctcca 499
              ||||||||||||||||||||
Sbjct: 100013 tgacatgttctgtatctcca 99994

>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence
          Length = 185933

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    atgccattaaaatcatgcat 473
              ||||||||||||||||||||
Sbjct: 106141 atgccattaaaatcatgcat 106160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,301,982
Number of Sequences: 3902068
Number of extensions: 5301982
Number of successful extensions: 102043
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101867
Number of HSP's gapped (non-prelim): 176
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)