>CK5P3_ARATH (Q9FG23) CDK5RAP3-like protein|
          Length = 522

 Score =  166 bits (419), Expect = 8e-41
 Identities = 94/158 (59%), Positives = 113/158 (71%), Gaps = 4/158 (2%)
 Frame = -2

Query: 676 ESATIENAPTE----SGQYECSTEERSQLLEKEYRNNILDDLLEVKSFLTLRLAEMRNAD 509
           +SA +E+  T+    + Q   S  ERSQLLE EYRN ILDDL EVK+FL  RL E+RN D
Sbjct: 360 DSALLESNQTQLTDSTTQVLGSGGERSQLLETEYRNKILDDLYEVKAFLNQRLIELRNED 419

Query: 508 TSSLQHQVQAVSPFVLQQYAPDRLENMLVEVSSAISLLTNQKTLDLIMILNSXRFLDRLV 329
           T SLQH VQAVSP VLQQY+P+ +E M+V++S AISLLTN+K+ DLIMILNS RFLDRLV
Sbjct: 420 TLSLQHHVQAVSPMVLQQYSPETIEPMVVDISMAISLLTNKKSRDLIMILNSKRFLDRLV 479

Query: 328 STLXXXXXXEVXXREGLGXLSVKRMELQNAXKSSWPKQ 215
           S L      EV  RE L  +  +RMELQN+  + WPKQ
Sbjct: 480 SELEEKKHREVKLRESLKDVGRRRMELQNSLSAIWPKQ 517

>CK5P3_MOUSE (Q99LM2) CDK5 regulatory subunit-associated protein 3|
          Length = 503

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
 Frame = -2

Query: 667 TIENAPTESGQYECSTEERSQLLE-KEYRNNILDDLLEVKSFLTLRLAEM-RNADTSSLQ 494
           T+    TE+ +      +   LLE  E RN  +D+L+E++ FL+ R  EM   AD  S+ 
Sbjct: 319 TVLETGTEAPEGVARGSDALTLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS 378

Query: 493 HQVQAVSPFVLQQYAPDRLENMLVEVSSAISLLTNQKTLDLIMILNSXRFLDRLVSTLXX 314
            Q Q ++P +LQ    +++ +++  +   I  LT+ +   L MIL S R++DR+   L  
Sbjct: 379 -QFQ-LAPAILQGQTKEKMLSLVSTLQQLIGRLTSLRMQHLFMILASPRYVDRVTEFLQQ 436

Query: 313 XXXXEVXXREGLGXLSVKRMELQNAXKSSWPKQEAAITKTRELKKLCEATLSSMFDSRPV 134
                         +  K+ E      +  PK +  + KTREL+KL EA +S  +  RPV
Sbjct: 437 KLKQSQLLALKKELMVEKQQEALQEQAALEPKLDLLLEKTRELQKLIEADISKRYSGRPV 496

Query: 133 HIIG 122
           +++G
Sbjct: 497 NLMG 500

>CK5P3_RAT (Q9JLH7) CDK5 regulatory subunit-associated protein 3 (CDK5|
           activator-binding protein C53)
          Length = 504

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
 Frame = -2

Query: 667 TIENAPTESGQYECSTEERSQLLE-KEYRNNILDDLLEVKSFLTLRLAEM-RNADTSSLQ 494
           T+    TE+ +      +   LLE  E RN  +D+L+E++ FL+ R  EM   AD  S+ 
Sbjct: 320 TVLETGTEAPEGVARGSDALTLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS 379

Query: 493 HQVQAVSPFVLQQYAPDRLENMLVEVSSAISLLTNQKTLDLIMILNSXRFLDRLVSTLXX 314
            Q Q ++P +LQ    +++ +++  +   I  LT+     L MIL S R++DR+   L  
Sbjct: 380 -QFQ-LAPAILQGQTKEKMLSLVSTLQHLIGQLTSLDLQHLFMILASPRYVDRVTELLQQ 437

Query: 313 XXXXEVXXREGLGXLSVKRMELQNAXKSSWPKQEAAITKTRELKKLCEATLSSMFDSRPV 134
                         +  K+ E      +  PK +  + KTREL+KL EA +S  ++ RPV
Sbjct: 438 KLKQSQLLALKKDLMVEKQQEALQEQAALEPKLDLLLEKTRELQKLIEADISKRYNGRPV 497

Query: 133 HIIG 122
           +++G
Sbjct: 498 NLMG 501

>CK5P3_HUMAN (Q96JB5) CDK5 regulatory subunit-associated protein 3 (CDK5|
           activator-binding protein C53) (HSF-27 protein)
          Length = 506

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
 Frame = -2

Query: 667 TIENAPTESGQYECSTEERSQLLE-KEYRNNILDDLLEVKSFLTLRLAEM-RNADTSSLQ 494
           T+  A T++ +      +   LLE  E RN  LD+L+E++ FL  R  E+   AD  S+ 
Sbjct: 322 TVLEAGTQAPEGVARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVS 381

Query: 493 HQVQAVSPFVLQQYAPDRLENMLVEVSSAISLLTNQKTLDLIMILNSXRFLDRLVSTLXX 314
            Q Q ++P +LQ    +++  M+  +   I  LT+ +   L MIL S R++DR+   L  
Sbjct: 382 -QFQ-LAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQ 439

Query: 313 XXXXEVXXREGLGXLSVKRMELQNAXKSSWPKQEAAITKTRELKKLCEATLSSMFDSRPV 134
                         +  K+ E      +  PK +  + KT+EL+KL EA +S  +  RPV
Sbjct: 440 KLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPV 499

Query: 133 HIIG 122
           +++G
Sbjct: 500 NLMG 503

>CK5P3_PONPY (Q5REX6) CDK5 regulatory subunit-associated protein 3|
          Length = 506

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
 Frame = -2

Query: 667 TIENAPTESGQYECSTEERSQLLE-KEYRNNILDDLLEVKSFLTLRLAEM-RNADTSSLQ 494
           T+  A T++ +      +   LLE  E RN  LD+L+E++ FL  R  E+   AD  S+ 
Sbjct: 322 TVLEAGTQAPEGVARGPDALTLLEYTETRNQFLDELMELEIFLARRAVELSEEADVLSVS 381

Query: 493 HQVQAVSPFVLQQYAPDRLENMLVEVSSAISLLTNQKTLDLIMILNSXRFLDRLVSTLXX 314
            Q Q ++P +LQ    ++   M+  +   I  LT+ +   L MIL S R++DR+   L  
Sbjct: 382 -QFQ-LAPAILQGQTKEKTVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQ 439

Query: 313 XXXXEVXXREGLGXLSVKRMELQNAXKSSWPKQEAAITKTRELKKLCEATLSSMFDSRPV 134
                         +  K+ E      +  PK +  + KT+EL+KL EA +S  +  RPV
Sbjct: 440 KLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPV 499

Query: 133 HIIG 122
           +++G
Sbjct: 500 NLMG 503

>CK5P3_DROME (Q95SK3) CDK5RAP3-like protein|
          Length = 509

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 37/159 (23%), Positives = 76/159 (47%)
 Frame = -2

Query: 589 YRNNILDDLLEVKSFLTLRLAEMRNADTSSLQHQVQAVSPFVLQQYAPDRLENMLVEVSS 410
           YR+  LD++ E++SFL +R+ E++  ++SS    +       +  +  + +  +LV V  
Sbjct: 354 YRDRFLDEIYELESFLRMRIYELKQLESSS---DIMFSLMDNIATHDGESIWKILVSVEK 410

Query: 409 AISLLTNQKTLDLIMILNSXRFLDRLVSTLXXXXXXEVXXREGLGXLSVKRMELQNAXKS 230
            I   ++++T  L  + +S ++ + L + L          R     L    +EL+   + 
Sbjct: 411 IIQQTSDKQTQHLFQLKHSPKYANMLATKLQQMTKAVEKLRATREALKQLTIELREQRQD 470

Query: 229 SWPKQEAAITKTRELKKLCEATLSSMFDSRPVHIIGEIN 113
             P  E  I +TR L+   E  +S  + +R V+++G +N
Sbjct: 471 LNPVLEELIAQTRTLQSHIEKDISKRYKNRVVNLMGGVN 509

>TT16_ARATH (Q8RYD9) TRANSPARENT TESTA 16 protein (Arabidopsis BSISTER MADS-box|
           protein)
          Length = 252

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -2

Query: 283 GLGXLSVKRMELQNAXKSSWPKQEAA-ITKTRELKKLCEA 167
           G G + +K++E Q A + ++ K+    I KTREL  LC+A
Sbjct: 2   GRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDA 41

>AGL15_ARATH (Q38847) Agamous-like MADS-box protein AGL15|
          Length = 268

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = -2

Query: 283 GLGXLSVKRMELQNAXKSSWPKQEAAITK-TRELKKLCEATLSSMFDSR 140
           G G + +KR+E  N+ + ++ K+ + + K  REL  LC+A ++ +  S+
Sbjct: 2   GRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSK 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,255,286
Number of Sequences: 219361
Number of extensions: 1422037
Number of successful extensions: 3820
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3816
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)