ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507110.1| PREDICTED Oryza sativa (japonica cultivar-group... 100 8e-18
2ref|XM_479906.1| Oryza sativa (japonica cultivar-group), mRNA 100 8e-18
3dbj|AK068373.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
4dbj|AK058365.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
6dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
7gb|AY111803.1| Zea mays CL4927_1 mRNA sequence 76 1e-10
8gb|AY109685.1| Zea mays CL4926_1 mRNA sequence 50 0.007
9ref|NM_197013.1| Oryza sativa (japonica cultivar-group) unknown ... 44 0.42
10gb|AY343611.1| Human respiratory syncytial virus isolate BE-11-0... 44 0.42
11dbj|AK099202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
12dbj|AK072265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
13dbj|AK061181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
14ref|XM_638555.1| Dictyostelium discoideum hypothetical protein (... 42 1.7
15gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 42 1.7
16gb|AC158762.4| Mus musculus chromosome 1, clone RP24-255O19, com... 42 1.7
17gb|AC147890.2| Xenopus tropicalis clone CH216-168J11, complete s... 42 1.7
18emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 i... 42 1.7
19gb|AC110042.12| Mus musculus chromosome 1, clone RP23-278C6, com... 42 1.7
20gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, com... 40 6.6
21gb|AC114677.13| Mus musculus chromosome 18, clone RP24-213K19, c... 40 6.6
22gb|AC102688.10| Mus musculus chromosome 5, clone RP24-138J15, co... 40 6.6
23ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 6.6
24gb|AY343593.1| Human respiratory syncytial virus isolate BE-1235... 40 6.6
25gb|AY343592.1| Human respiratory syncytial virus isolate BE-1221... 40 6.6
26gb|AY343591.1| Human respiratory syncytial virus isolate BE-174-... 40 6.6
27gb|AY343590.1| Human respiratory syncytial virus isolate BE-1200... 40 6.6
28gb|AY343589.1| Human respiratory syncytial virus isolate BE-1206... 40 6.6
29gb|AY343588.1| Human respiratory syncytial virus isolate BE-1160... 40 6.6
30gb|AF516119.2| Human respiratory syncytial virus A isolate Mon/3... 40 6.6
31gb|AC121525.7| Mus musculus chromosome 5, clone RP23-359D12, com... 40 6.6
32emb|AL512665.11| Human DNA sequence from clone RP11-88H9 on chro... 40 6.6
33gb|AY571776.1| Human respiratory syncytial virus isolate Mon/5/9... 40 6.6
34gb|AC107960.3| Homo sapiens chromosome 8, clone RP11-983C19, com... 40 6.6
35gb|AC107870.6| Homo sapiens chromosome 8, clone CTC-777N14, comp... 40 6.6
36dbj|AK127064.1| Homo sapiens cDNA FLJ45121 fis, clone BRAWH3036077 40 6.6
37gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, compl... 40 6.6
38emb|BX005480.12| Mouse DNA sequence from clone RP23-142M12 on ch... 40 6.6
39gb|AC124526.6| Mus musculus BAC clone RP23-406P13 from chromosom... 40 6.6
40gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, com... 40 6.6
41gb|AC097710.2| Homo sapiens BAC clone RP11-44H17 from 4, complet... 40 6.6
42gb|AC138028.1| Homo sapiens chromosome 16 clone RP5-1142A6, comp... 40 6.6
43ref|NM_207451.1| Homo sapiens FLJ45121 protein (FLJ45121), mRNA 40 6.6
44gb|AF193310.1|AF193310 Human respiratory syncytial virus isolate... 40 6.6
45gb|AF193304.1|AF193304 Human respiratory syncytial virus isolate... 40 6.6
46emb|AL831749.9| Mouse DNA sequence from clone RP23-99A5 on chrom... 40 6.6
47emb|X73355.1|RSVGPF Respiratory syncytial virus (6614) gene for ... 40 6.6
48emb|Z33430.1|HRSVGL17 Human respiratory syncytial virus (MON-8-9... 40 6.6
49gb|AC023172.1|AC023172 Homo sapiens chromosome 19, cosmid F22376... 40 6.6
50emb|CR354430.16| Zebrafish DNA sequence from clone CH211-218P2 i... 40 6.6
51gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, c... 40 6.6
52dbj|AP005661.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.6 
>ref|XM_507110.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1163_G08.28
           mRNA
          Length = 1319

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgtttaccggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaa 443
           |||||||||||||||| || || |||||| |||||||| ||| || ||||||||||||||
Sbjct: 934 ctgtttaccggtagtatgaggctgtgatgtacagcagagcagcggtagctgctgtaacaa 875

                                             
Query: 444 tcaattcctggtagtaataaacaatccggggagt 477
           |||| ||||| |||||||||||||| || |||||
Sbjct: 874 tcaactcctgatagtaataaacaatgcgtggagt 841
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>ref|XM_479906.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1311

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgtttaccggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaa 443
           |||||||||||||||| || || |||||| |||||||| ||| || ||||||||||||||
Sbjct: 920 ctgtttaccggtagtatgaggctgtgatgtacagcagagcagcggtagctgctgtaacaa 861

                                             
Query: 444 tcaattcctggtagtaataaacaatccggggagt 477
           |||| ||||| |||||||||||||| || |||||
Sbjct: 860 tcaactcctgatagtaataaacaatgcgtggagt 827
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>dbj|AK068373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149L10, full
           insert sequence
          Length = 1311

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgtttaccggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaa 443
           |||||||||||||||| || || |||||| |||||||| ||| || ||||||||||||||
Sbjct: 920 ctgtttaccggtagtatgaggctgtgatgtacagcagagcagcggtagctgctgtaacaa 861

                                             
Query: 444 tcaattcctggtagtaataaacaatccggggagt 477
           |||| ||||| |||||||||||||| || |||||
Sbjct: 860 tcaactcctgatagtaataaacaatgcgtggagt 827
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>dbj|AK058365.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F11, full
           insert sequence
          Length = 1319

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgtttaccggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaa 443
           |||||||||||||||| || || |||||| |||||||| ||| || ||||||||||||||
Sbjct: 934 ctgtttaccggtagtatgaggctgtgatgtacagcagagcagcggtagctgctgtaacaa 875

                                             
Query: 444 tcaattcctggtagtaataaacaatccggggagt 477
           |||| ||||| |||||||||||||| || |||||
Sbjct: 874 tcaactcctgatagtaataaacaatgcgtggagt 841
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                           
Query: 384     ctgtttaccggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaa 443
               |||||||||||||||| || || |||||| |||||||| ||| || ||||||||||||||
Sbjct: 1574996 ctgtttaccggtagtatgaggctgtgatgtacagcagagcagcggtagctgctgtaacaa 1575055

                          
Query: 444     tcaattcctgg 454
               |||| ||||||
Sbjct: 1575056 tcaactcctgg 1575066
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>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1163_G08
          Length = 150676

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                          
Query: 384    ctgtttaccggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaa 443
              |||||||||||||||| || || |||||| |||||||| ||| || ||||||||||||||
Sbjct: 102484 ctgtttaccggtagtatgaggctgtgatgtacagcagagcagcggtagctgctgtaacaa 102543

                         
Query: 444    tcaattcctgg 454
              |||| ||||||
Sbjct: 102544 tcaactcctgg 102554
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>gb|AY111803.1| Zea mays CL4927_1 mRNA sequence
          Length = 625

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 392 cggtagtacgaagccgtgatgcacagcagaacagaggcagctgctgtaacaatcaattcc 451
           |||||||| || || ||||||||||| ||||| |||| ||| || ||||||||||  |||
Sbjct: 433 cggtagtatgaggctgtgatgcacagaagaacggaggtagccgccgtaacaatcagctcc 492

                                     
Query: 452 tggtagtaataaacaatccggggagt 477
           ||||||||||||||||  ||||||||
Sbjct: 493 tggtagtaataaacaaggcggggagt 518
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>gb|AY109685.1| Zea mays CL4926_1 mRNA sequence
          Length = 1162

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 401 gaagccgtgatgcacagcagaacagaggcagctgctgtaacaatcaattcctggtagtaa 460
           |||||||||||| |||| ||||| ||||||||  | ||||||||||  ||||| ||||| 
Sbjct: 916 gaagccgtgatgtacagaagaacggaggcagccacagtaacaatcagctcctgatagtag 857

                            
Query: 461 taaacaatccggggagt 477
           ||||  || ||||||||
Sbjct: 856 taaaacatacggggagt 840
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>ref|NM_197013.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0055P24.2), mRNA
          Length = 762

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 410 atgcacagcagaacagaggcagctgctgtaacaatcaattcctggtagtaataaacaa 467
           ||||| |||| |||||| | |||||  || ||||||||||||||| ||| ||||||||
Sbjct: 740 atgcaaagcaaaacagatgaagctgtagtcacaatcaattcctggaagttataaacaa 683
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>gb|AY343611.1| Human respiratory syncytial virus isolate BE-11-01 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 38  acaacaccaaaacaaaccacaa 59
           ||||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccacaa 200
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>dbj|AK099202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116K03, full
           insert sequence
          Length = 1455

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 410 atgcacagcagaacagaggcagctgctgtaacaatcaattcctggtagtaataaacaa 467
           ||||| |||| |||||| | |||||  || ||||||||||||||| ||| ||||||||
Sbjct: 996 atgcaaagcaaaacagatgaagctgtagtcacaatcaattcctggaagttataaacaa 939
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>dbj|AK072265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006K06, full
            insert sequence
          Length = 1461

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 410  atgcacagcagaacagaggcagctgctgtaacaatcaattcctggtagtaataaacaa 467
            ||||| |||| |||||| | |||||  || ||||||||||||||| ||| ||||||||
Sbjct: 1006 atgcaaagcaaaacagatgaagctgtagtcacaatcaattcctggaagttataaacaa 949
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>dbj|AK061181.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D05, full
           insert sequence
          Length = 1132

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 410 atgcacagcagaacagaggcagctgctgtaacaatcaattcctggtagtaataaacaa 467
           ||||| |||| |||||| | |||||  || ||||||||||||||| ||| ||||||||
Sbjct: 968 atgcaaagcaaaacagatgaagctgtagtcacaatcaattcctggaagttataaacaa 911
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>ref|XM_638555.1| Dictyostelium discoideum hypothetical protein (DDB0217735), partial
            mRNA
          Length = 1689

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 143  caaaatatgttcaccatccat 163
            |||||||||||||||||||||
Sbjct: 1365 caaaatatgttcaccatccat 1345
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>gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the
            complete sequence
          Length = 254436

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 135  tatgcacacaaaatatgttca 155
            |||||||||||||||||||||
Sbjct: 4117 tatgcacacaaaatatgttca 4097
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>gb|AC158762.4| Mus musculus chromosome 1, clone RP24-255O19, complete sequence
          Length = 176468

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    aaaacaaaccacaagaaaaag 66
             |||||||||||||||||||||
Sbjct: 60804 aaaacaaaccacaagaaaaag 60784
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>gb|AC147890.2| Xenopus tropicalis clone CH216-168J11, complete sequence
          Length = 152053

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    agtatgcacacaaaatatgtt 153
              |||||||||||||||||||||
Sbjct: 105974 agtatgcacacaaaatatgtt 105994
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>emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 in linkage group 21,
             complete sequence
          Length = 202152

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   tatatttcaaaaaattatgtc 264
             |||||||||||||||||||||
Sbjct: 81663 tatatttcaaaaaattatgtc 81683
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>gb|AC110042.12| Mus musculus chromosome 1, clone RP23-278C6, complete sequence
          Length = 170602

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 46     aaaacaaaccacaagaaaaag 66
              |||||||||||||||||||||
Sbjct: 110107 aaaacaaaccacaagaaaaag 110087
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>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence
          Length = 168366

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    aacaccaaaacaaaccacaa 59
             ||||||||||||||||||||
Sbjct: 62967 aacaccaaaacaaaccacaa 62948
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>gb|AC114677.13| Mus musculus chromosome 18, clone RP24-213K19, complete sequence
          Length = 182311

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    acacaagtgtggagtctcac 317
              ||||||||||||||||||||
Sbjct: 120648 acacaagtgtggagtctcac 120667
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>gb|AC102688.10| Mus musculus chromosome 5, clone RP24-138J15, complete sequence
          Length = 166655

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 447   attcctggtagtaataaacaatcc 470
             |||||||||||||||||| |||||
Sbjct: 17932 attcctggtagtaataaataatcc 17955
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>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome
              19
          Length = 413528

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    gatgcacagcagaacagagg 428
              ||||||||||||||||||||
Sbjct: 228393 gatgcacagcagaacagagg 228412
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>gb|AY343593.1| Human respiratory syncytial virus isolate BE-12350-96 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccac 198
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>gb|AY343592.1| Human respiratory syncytial virus isolate BE-12216-96 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccac 198
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>gb|AY343591.1| Human respiratory syncytial virus isolate BE-174-95 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccac 198
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>gb|AY343590.1| Human respiratory syncytial virus isolate BE-12005-94 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccac 198
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>gb|AY343589.1| Human respiratory syncytial virus isolate BE-12061-94 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccac 198
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>gb|AY343588.1| Human respiratory syncytial virus isolate BE-11600-94 attachment
           protein (G) mRNA, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 179 acaacaccaaaacaaaccac 198
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>gb|AF516119.2| Human respiratory syncytial virus A isolate Mon/3/97 G glycoprotein
           mRNA, complete cds
          Length = 923

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 462 acaacaccaaaacaaaccac 481
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>gb|AC121525.7| Mus musculus chromosome 5, clone RP23-359D12, complete sequence
          Length = 188700

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     aacaccaaaacaaaccacaa 59
              ||||||||||||||||||||
Sbjct: 171360 aacaccaaaacaaaccacaa 171341
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>emb|AL512665.11| Human DNA sequence from clone RP11-88H9 on chromosome 1 Contains the 5'
             end of the KCND3 gen for potassium voltage-gated channel
             Shal-related subfamily member 3, two novel genes and two
             CpG islands, complete sequence
          Length = 169599

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   agcagaacagaggcagctgc 435
             ||||||||||||||||||||
Sbjct: 39202 agcagaacagaggcagctgc 39221
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>gb|AY571776.1| Human respiratory syncytial virus isolate Mon/5/97 G glycoprotein
           gene, complete cds
          Length = 923

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 462 acaacaccaaaacaaaccac 481
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>gb|AC107960.3| Homo sapiens chromosome 8, clone RP11-983C19, complete sequence
          Length = 180854

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  aacatccaaaggtttcctaa 360
            ||||||||||||||||||||
Sbjct: 4986 aacatccaaaggtttcctaa 5005
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>gb|AC107870.6| Homo sapiens chromosome 8, clone CTC-777N14, complete sequence
          Length = 73460

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   aacatccaaaggtttcctaa 360
             ||||||||||||||||||||
Sbjct: 17818 aacatccaaaggtttcctaa 17837
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>dbj|AK127064.1| Homo sapiens cDNA FLJ45121 fis, clone BRAWH3036077
          Length = 4521

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  agaacagaggcagctgctgt 438
            ||||||||||||||||||||
Sbjct: 3022 agaacagaggcagctgctgt 3041
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>gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, complete sequence
          Length = 160046

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    aacatccaaaggtttcctaa 360
              ||||||||||||||||||||
Sbjct: 119005 aacatccaaaggtttcctaa 119024
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>emb|BX005480.12| Mouse DNA sequence from clone RP23-142M12 on chromosome X, complete
              sequence
          Length = 196326

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     aaaacaaaccacaagaaaaa 65
              ||||||||||||||||||||
Sbjct: 120081 aaaacaaaccacaagaaaaa 120062
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>gb|AC124526.6| Mus musculus BAC clone RP23-406P13 from chromosome 18, complete sequence
          Length = 203854

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     gtctaaatacggatgagaatcaga 107
              |||||||||| |||||||||||||
Sbjct: 141387 gtctaaataccgatgagaatcaga 141410
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>gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, complete sequence
          Length = 154169

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  gatgcacagcagaacagagg 428
            ||||||||||||||||||||
Sbjct: 4649 gatgcacagcagaacagagg 4668
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>gb|AC097710.2| Homo sapiens BAC clone RP11-44H17 from 4, complete sequence
          Length = 156848

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   aagtatatttcaaaaaatta 260
             ||||||||||||||||||||
Sbjct: 26872 aagtatatttcaaaaaatta 26891
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>gb|AC138028.1| Homo sapiens chromosome 16 clone RP5-1142A6, complete sequence
          Length = 127698

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   agaacagaggcagctgctgt 438
             ||||||||||||||||||||
Sbjct: 38760 agaacagaggcagctgctgt 38741
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>ref|NM_207451.1| Homo sapiens FLJ45121 protein (FLJ45121), mRNA
          Length = 4521

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  agaacagaggcagctgctgt 438
            ||||||||||||||||||||
Sbjct: 3022 agaacagaggcagctgctgt 3041
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>gb|AF193310.1|AF193310 Human respiratory syncytial virus isolate 92359 glycoprotein (G)
           mRNA, partial cds
          Length = 840

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 390 acaacaccaaaacaaaccac 409
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>gb|AF193304.1|AF193304 Human respiratory syncytial virus isolate 91087 glycoprotein (G)
           mRNA, partial cds
          Length = 840

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 390 acaacaccaaaacaaaccac 409
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>emb|AL831749.9| Mouse DNA sequence from clone RP23-99A5 on chromosome X, complete
             sequence
          Length = 189866

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   aagtatatttcaaaaaatta 260
             ||||||||||||||||||||
Sbjct: 40487 aagtatatttcaaaaaatta 40506
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>emb|X73355.1|RSVGPF Respiratory syncytial virus (6614) gene for G protein
          Length = 896

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 441 acaacaccaaaacaaaccac 460
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>emb|Z33430.1|HRSVGL17 Human respiratory syncytial virus (MON-8-92) subgroup A, G gene for
           glycoprotein
          Length = 922

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  acaacaccaaaacaaaccac 57
           ||||||||||||||||||||
Sbjct: 462 acaacaccaaaacaaaccac 481
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>gb|AC023172.1|AC023172 Homo sapiens chromosome 19, cosmid F22376, complete sequence
          Length = 42547

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   gatgcacagcagaacagagg 428
             ||||||||||||||||||||
Sbjct: 39124 gatgcacagcagaacagagg 39143
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>emb|CR354430.16| Zebrafish DNA sequence from clone CH211-218P2 in linkage group 25,
              complete sequence
          Length = 197231

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     tttgctgacaacaccaaaacaaac 54
              ||||||||||||| ||||||||||
Sbjct: 135913 tttgctgacaacaacaaaacaaac 135936
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>gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, complete sequence
          Length = 242449

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    acacaagtgtggagtctcac 317
              ||||||||||||||||||||
Sbjct: 222473 acacaagtgtggagtctcac 222454
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>dbj|AP005661.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1182F3, complete
             sequence
          Length = 151887

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   aacatccaaaggtttcctaa 360
             ||||||||||||||||||||
Sbjct: 48365 aacatccaaaggtttcctaa 48384


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,774,420
Number of Sequences: 3902068
Number of extensions: 4774420
Number of successful extensions: 97599
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97490
Number of HSP's gapped (non-prelim): 109
length of query: 485
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 463
effective length of database: 17,147,199,772
effective search space: 7939153494436
effective search space used: 7939153494436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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